F277536
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 181 | 151 | 181 | 189 |
Family's Representative Sequence
| Representative Sequence | 3300026078|Ga0207702_11142824|Ga0207702_111428241 |
| Length | 210 |
| Sequence | MIFTETKLKGAFILDLERREDSRGFFARAFCQREFEEHGLKAVIAQSNVAFNHKKGTLRGMHFQFPPAAETKLVRATRGGILDIIVDLRPESPTFLQHIEVELSEDNNRALYVPERFAHGYQVLRDRTETSYQVGEFYTPGSEGGLPYNDPGLGLSWPFPVSVISEKDQAWQPLVEQEEELVRRMSVEQLASSSKSQGENSNRIAITGLR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 2 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 7 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 8 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 20 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 22 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 23 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 24 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 25 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 26 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 27 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 28 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 30 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 31 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 32 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 33 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 34 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 36 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 37 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 77 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 79 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 80 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 81 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 82 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 83 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 84 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 85 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 86 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 87 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 88 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 89 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 90 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 91 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 92 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 93 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 94 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 95 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 96 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 97 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 98 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 99 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 100 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 101 | 3300041509 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG | Metagenome | Unclassified |
| 102 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 103 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 104 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 130 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 131 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 132 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 133 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 134 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 135 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 136 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 137 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 138 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 139 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 141 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 145 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 146 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 149 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 151 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 7.18 |
| Rhizosphere | 91.16 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.66 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootL2_10022175 | 3300003322 | Bacteria | 1483 |
| 2 | Ga0065707_10084675 | 3300005295 | Bacteria | 6903 |
| 3 | Ga0070658_10549034 | 3300005327 | Bacteria | 1000 |
| 4 | Ga0070683_100047449 | 3300005329 | Bacteria | 3969 |
| 5 | Ga0070683_100066653 | 3300005329 | Bacteria | 3354 |
| 6 | Ga0070670_100210662 | 3300005331 | Bacteria | 1690 |
| 7 | Ga0070670_100350869 | 3300005331 | Bacteria | 1296 |
| 8 | Ga0070682_100967806 | 3300005337 | Bacteria | 704 |
| 9 | Ga0068868_100574020 | 3300005338 | Bacteria | 996 |
| 10 | Ga0070675_100765574 | 3300005354 | Unclassified | 881 |
| 11 | Ga0070673_100098819 | 3300005364 | Bacteria | 2400 |
| 12 | Ga0070688_100154596 | 3300005365 | Bacteria | 1571 |
| 13 | Ga0070708_100567680 | 3300005445 | Bacteria | 1070 |
| 14 | Ga0070685_10133071 | 3300005466 | Bacteria | 1557 |
| 15 | Ga0070685_10327911 | 3300005466 | Bacteria | 1040 |
| 16 | Ga0070707_100045342 | 3300005468 | Bacteria | 4209 |
| 17 | Ga0070698_100406919 | 3300005471 | Bacteria | 1294 |
| 18 | Ga0070684_100155916 | 3300005535 | Bacteria | 2071 |
| 19 | Ga0070684_100167492 | 3300005535 | Bacteria | 1995 |
| 20 | Ga0070672_100163106 | 3300005543 | Bacteria | 1851 |
| 21 | Ga0070665_100280029 | 3300005548 | Bacteria | 1669 |
| 22 | Ga0070665_100511730 | 3300005548 | Bacteria | 1212 |
| 23 | Ga0070704_101089234 | 3300005549 | Bacteria | 725 |
| 24 | Ga0068855_100154289 | 3300005563 | Bacteria | 2610 |
| 25 | Ga0070664_100201163 | 3300005564 | Bacteria | 1778 |
| 26 | Ga0070664_100220906 | 3300005564 | Bacteria | 1695 |
| 27 | Ga0070664_100729293 | 3300005564 | Bacteria | 924 |
| 28 | Ga0068856_100524073 | 3300005614 | Bacteria | 1206 |
| 29 | Ga0068859_100147223 | 3300005617 | Unclassified | 2430 |
| 30 | Ga0068864_100048846 | 3300005618 | Bacteria | 3639 |
| 31 | Ga0068864_100238011 | 3300005618 | Bacteria | 1686 |
| 32 | Ga0068866_10173149 | 3300005718 | Bacteria | 1269 |
| 33 | Ga0068858_100112495 | 3300005842 | Bacteria | 2543 |
| 34 | Ga0081455_10002653 | 3300005937 | Bacteria | 21172 |
| 35 | Ga0081538_10057281 | 3300005981 | Bacteria | 2273 |
| 36 | Ga0070717_10004616 | 3300006028 | Bacteria | 9983 |
| 37 | Ga0068871_100541771 | 3300006358 | Unclassified | 1053 |
| 38 | Ga0075430_100070912 | 3300006846 | Bacteria | 2923 |
| 39 | Ga0075431_100347800 | 3300006847 | Unclassified | 1491 |
| 40 | Ga0075429_100050918 | 3300006880 | Bacteria | 3603 |
| 41 | Ga0075436_100747896 | 3300006914 | Bacteria | 726 |
| 42 | Ga0097620_100147219 | 3300006931 | Unclassified | 2430 |
| 43 | Ga0075435_100117288 | 3300007076 | Bacteria | 2218 |
| 44 | Ga0099794_10000099 | 3300007265 | Bacteria | 32049 |
| 45 | Ga0111539_10027103 | 3300009094 | Bacteria | 6999 |
| 46 | Ga0111539_10232319 | 3300009094 | Bacteria | 2148 |
| 47 | Ga0111539_11079868 | 3300009094 | Bacteria | 933 |
| 48 | Ga0105245_10085820 | 3300009098 | Bacteria | 2886 |
| 49 | Ga0105245_11129719 | 3300009098 | Bacteria | 830 |
| 50 | Ga0105247_10087710 | 3300009101 | Bacteria | 1971 |
| 51 | Ga0114129_10083571 | 3300009147 | Bacteria | 4434 |
| 52 | Ga0105243_10040733 | 3300009148 | Bacteria | 3630 |
| 53 | Ga0105248_10072074 | 3300009177 | Bacteria | 3882 |
| 54 | Ga0105248_10231337 | 3300009177 | Bacteria | 2081 |
| 55 | Ga0105248_10998347 | 3300009177 | Bacteria | 945 |
| 56 | Ga0105249_11242710 | 3300009553 | Bacteria | 816 |
| 57 | Ga0105239_10064814 | 3300010375 | Bacteria | 4011 |
| 58 | Ga0105246_10035734 | 3300011119 | Bacteria | 3323 |
| 59 | Ga0105246_10145683 | 3300011119 | Bacteria | 1786 |
| 60 | Ga0157371_10483977 | 3300013102 | Bacteria | 912 |
| 61 | Ga0157378_11181865 | 3300013297 | Bacteria | 804 |
| 62 | Ga0163162_10153879 | 3300013306 | Unclassified | 2418 |
| 63 | Ga0157375_10229935 | 3300013308 | Bacteria | 2013 |
| 64 | Ga0157375_10238649 | 3300013308 | Bacteria | 1977 |
| 65 | Ga0157380_10100715 | 3300014326 | Bacteria | 2406 |
| 66 | Ga0157377_10182335 | 3300014745 | Bacteria | 1321 |
| 67 | Ga0163161_10027808 | 3300017792 | Bacteria | 4012 |
| 68 | Ga0207688_10106463 | 3300025901 | Bacteria | 1624 |
| 69 | Ga0207643_10006388 | 3300025908 | Bacteria | 6311 |
| 70 | Ga0207646_10203627 | 3300025922 | Bacteria | 1788 |
| 71 | Ga0207694_10653869 | 3300025924 | Bacteria | 886 |
| 72 | Ga0207650_10300417 | 3300025925 | Bacteria | 1311 |
| 73 | Ga0207659_10217416 | 3300025926 | Bacteria | 1534 |
| 74 | Ga0207659_10320627 | 3300025926 | Bacteria | 1278 |
| 75 | Ga0207687_10202459 | 3300025927 | Bacteria | 1553 |
| 76 | Ga0207687_10694262 | 3300025927 | Bacteria | 863 |
| 77 | Ga0207709_10139184 | 3300025935 | Bacteria | 1666 |
| 78 | Ga0207670_10403030 | 3300025936 | Bacteria | 1094 |
| 79 | Ga0207691_10073706 | 3300025940 | Bacteria | 3079 |
| 80 | Ga0207661_10255638 | 3300025944 | Bacteria | 1559 |
| 81 | Ga0207679_10157461 | 3300025945 | Bacteria | 1856 |
| 82 | Ga0207667_10814470 | 3300025949 | Bacteria | 930 |
| 83 | Ga0207712_10570887 | 3300025961 | Unclassified | 975 |
| 84 | Ga0207640_10076080 | 3300025981 | Bacteria | 2277 |
| 85 | Ga0207677_10823095 | 3300026023 | Unclassified | 832 |
| 86 | Ga0207703_10079359 | 3300026035 | Bacteria | 2731 |
| 87 | Ga0207639_10967776 | 3300026041 | Bacteria | 797 |
| 88 | Ga0207702_11142824 | 3300026078 | Bacteria | 773 |
| 89 | Ga0207641_11020996 | 3300026088 | Bacteria | 824 |
| 90 | Ga0207676_10283032 | 3300026095 | Bacteria | 1506 |
| 91 | Ga0207683_10656316 | 3300026121 | Unclassified | 972 |
| 92 | Ga0207698_10245274 | 3300026142 | Bacteria | 1635 |
| 93 | Ga0207428_10029468 | 3300027907 | Bacteria | 4549 |
| 94 | Ga0268266_11024502 | 3300028379 | Bacteria | 799 |
| 95 | Ga0265337_1011154 | 3300028556 | Bacteria | 3110 |
| 96 | Ga0265338_10020106 | 3300028800 | Bacteria | 7041 |
| 97 | Ga0265316_10025050 | 3300031344 | Unclassified | 4984 |
| 98 | Ga0307408_100012278 | 3300031548 | Bacteria | 5673 |
| 99 | Ga0307405_10005378 | 3300031731 | Bacteria | 6171 |
| 100 | Ga0307413_10092007 | 3300031824 | Bacteria | 1978 |
| 101 | Ga0307410_10001851 | 3300031852 | Bacteria | 9858 |
| 102 | Ga0307406_10001808 | 3300031901 | Bacteria | 11683 |
| 103 | Ga0307407_10018489 | 3300031903 | Bacteria | 3526 |
| 104 | Ga0307409_100000480 | 3300031995 | Bacteria | 17078 |
| 105 | Ga0307416_100000822 | 3300032002 | Bacteria | 16271 |
| 106 | Ga0307414_10117860 | 3300032004 | Bacteria | 2035 |
| 107 | Ga0307411_10291278 | 3300032005 | Bacteria | 1305 |
| 108 | Ga0307415_100003077 | 3300032126 | Bacteria | 8423 |
| 109 | Ga0373934_0013780 | 3300035086 | Bacteria | 3059 |
| 110 | Ga0373923_0033998 | 3300035111 | Bacteria | 2067 |
| 111 | Ga0373923_0356669 | 3300035111 | Bacteria | 699 |
| 112 | Ga0373954_0055106 | 3300035118 | Bacteria | 1870 |
| 113 | Ga0373954_0442741 | 3300035118 | Bacteria | 643 |
| 114 | Ga0373956_0053698 | 3300035119 | Bacteria | 1814 |
| 115 | Ga0373957_0109120 | 3300035120 | Bacteria | 1113 |
| 116 | Ga0373957_0165640 | 3300035120 | Bacteria | 912 |
| 117 | Ga0373955_0082632 | 3300035172 | Bacteria | 1818 |
| 118 | Ga0373955_0370694 | 3300035172 | Unclassified | 868 |
| 119 | Ga0373933_0728691 | 3300035724 | Bacteria | 652 |
| 120 | Ga0373937_0061170 | 3300036401 | Bacteria | 3461 |
| 121 | Ga0400483_000053 | 3300039062 | Unclassified | 1862 |
| 122 | Ga0451843_1247002 | 3300041509 | Bacteria | 1371 |
| 123 | Ga0453683_0000931 | 3300044673 | Bacteria | 27801 |
| 124 | Ga0451576_0747267 | 3300045051 | Bacteria | 1027 |
| 125 | Ga0495629_0011722 | 3300046459 | Bacteria | 6362 |
| 126 | Ga0495651_0032119 | 3300046462 | Bacteria | 4096 |
| 127 | Ga0495653_0037170 | 3300046463 | Bacteria | 3829 |
| 128 | Ga0495639_0015304 | 3300046475 | Bacteria | 3325 |
| 129 | Ga0495664_0022154 | 3300046477 | Bacteria | 3679 |
| 130 | Ga0495594_0166693 | 3300046499 | Bacteria | 1253 |
| 131 | Ga0495628_0033202 | 3300046516 | Bacteria | 4161 |
| 132 | Ga0495652_0052111 | 3300046529 | Bacteria | 3491 |
| 133 | Ga0495587_0001604 | 3300046536 | Bacteria | 15042 |
| 134 | Ga0495645_0022101 | 3300046543 | Bacteria | 4601 |
| 135 | Ga0495667_0039472 | 3300046559 | Bacteria | 3138 |
| 136 | Ga0495657_0167346 | 3300046675 | Bacteria | 1356 |
| 137 | Ga0495599_0032848 | 3300046678 | Bacteria | 3258 |
| 138 | Ga0495623_0071231 | 3300046679 | Bacteria | 2163 |
| 139 | Ga0495623_0215268 | 3300046679 | Bacteria | 1097 |
| 140 | Ga0495646_0098780 | 3300046680 | Bacteria | 1676 |
| 141 | Ga0495669_0029535 | 3300046684 | Bacteria | 2404 |
| 142 | Ga0495600_0089097 | 3300046809 | Bacteria | 2013 |
| 143 | Ga0495581_0008891 | 3300047315 | Bacteria | 5816 |
| 144 | Ga0495604_0069440 | 3300047317 | Bacteria | 2670 |
| 145 | Ga0495674_0312451 | 3300047319 | Bacteria | 1282 |
| 146 | Ga0495676_0051926 | 3300047321 | Bacteria | 3276 |
| 147 | Ga0495680_0193094 | 3300047322 | Bacteria | 1464 |
| 148 | Ga0495680_0390873 | 3300047322 | Bacteria | 962 |
| 149 | Ga0495680_0567088 | 3300047322 | Bacteria | 763 |
| 150 | Ga0495675_0034451 | 3300047444 | Bacteria | 3232 |
| 151 | Ga0495684_0002032 | 3300047471 | Bacteria | 16287 |
| 152 | Ga0495602_0034366 | 3300048088 | Bacteria | 4743 |
| 153 | Ga0496100_0366263 | 3300048903 | Bacteria | 1092 |
| 154 | Ga0496104_0698562 | 3300048907 | Bacteria | 922 |
| 155 | Ga0496104_1043578 | 3300048907 | Unclassified | 721 |
| 156 | Ga0496108_0660247 | 3300048911 | Unclassified | 909 |
| 157 | Ga0496109_0080600 | 3300048912 | Bacteria | 2999 |
| 158 | Ga0496109_0199516 | 3300048912 | Bacteria | 1881 |
| 159 | Ga0496110_0270435 | 3300048913 | Bacteria | 1547 |
| 160 | Ga0496110_0480164 | 3300048913 | Bacteria | 1132 |
| 161 | Ga0496110_0678772 | 3300048913 | Unclassified | 931 |
| 162 | Ga0496111_0122850 | 3300048914 | Bacteria | 1918 |
| 163 | Ga0496112_1009207 | 3300048915 | Unclassified | 752 |
| 164 | Ga0496113_0769793 | 3300048916 | Bacteria | 766 |
| 165 | Ga0496114_1099204 | 3300048917 | Bacteria | 680 |
| 166 | Ga0501031_0193983 | 3300049568 | Bacteria | 1326 |
| 167 | Ga0501047_0095941 | 3300049581 | Bacteria | 2844 |
| 168 | Ga0501071_0174935 | 3300049587 | Bacteria | 1608 |
| 169 | Ga0501076_0194387 | 3300049592 | Bacteria | 1656 |
| 170 | Ga0501077_0003910 | 3300049593 | Bacteria | 8973 |
| 171 | Ga0501083_0005709 | 3300049744 | Bacteria | 8807 |
| 172 | nmdc:mga09592_10043_c1 | 3300050508 | Bacteria | 7696 |
| 173 | nmdc:mga0qj67_15316_c1 | 3300050509 | Bacteria | 4958 |
| 174 | nmdc:mga06r32_14050_c1 | 3300050510 | Bacteria | 7261 |
| 175 | nmdc:mga08y16_20644_c1 | 3300050511 | Bacteria | 6952 |
| 176 | nmdc:mga08y16_328738_c1 | 3300050511 | Bacteria | 1573 |
| 177 | nmdc:mga0rr50_253135_c1 | 3300050513 | Bacteria | 1463 |
| 178 | Ga0495601_0234769 | 3300053077 | Bacteria | 1197 |
| 179 | Ga0495612_0050900 | 3300053078 | Bacteria | 1701 |
| 180 | Ga0495595_0022838 | 3300053084 | Bacteria | 2749 |
| 181 | Ga0495595_0048561 | 3300053084 | Bacteria | 1960 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005617 | Ga0068859_100147223 | Ga0068859_1001472232 | 173 |
| 2 | 3300006931 | Ga0097620_100147219 | Ga0097620_1001472192 | 173 |
| 3 | 3300009177 | Ga0105248_10231337 | Ga0105248_102313372 | 173 |
| 4 | 3300013306 | Ga0163162_10153879 | Ga0163162_101538792 | 173 |
| 5 | 3300005981 | Ga0081538_10057281 | Ga0081538_100572813 | 175 |
| 6 | 3300032005 | Ga0307411_10291278 | Ga0307411_102912782 | 175 |
| 7 | 3300039062 | Ga0400483_000053 | Ga0400483_000053_87_614 | 175 |
| 8 | 3300005471 | Ga0070698_100406919 | Ga0070698_1004069192 | 180 |
| 9 | 3300035086 | Ga0373934_0013780 | Ga0373934_0013780_636_1178 | 180 |
| 10 | 3300035111 | Ga0373923_0033998 | Ga0373923_0033998_307_849 | 180 |
| 11 | 3300035118 | Ga0373954_0055106 | Ga0373954_0055106_206_748 | 180 |
| 12 | 3300035119 | Ga0373956_0053698 | Ga0373956_0053698_570_1112 | 180 |
| 13 | 3300035120 | Ga0373957_0109120 | Ga0373957_0109120_88_630 | 180 |
| 14 | 3300035172 | Ga0373955_0370694 | Ga0373955_0370694_206_748 | 180 |
| 15 | 3300046462 | Ga0495651_0032119 | Ga0495651_0032119_3075_3617 | 180 |
| 16 | 3300046463 | Ga0495653_0037170 | Ga0495653_0037170_712_1254 | 180 |
| 17 | 3300046477 | Ga0495664_0022154 | Ga0495664_0022154_3075_3617 | 180 |
| 18 | 3300046516 | Ga0495628_0033202 | Ga0495628_0033202_190_732 | 180 |
| 19 | 3300046529 | Ga0495652_0052111 | Ga0495652_0052111_638_1180 | 180 |
| 20 | 3300046536 | Ga0495587_0001604 | Ga0495587_0001604_11318_11860 | 180 |
| 21 | 3300046543 | Ga0495645_0022101 | Ga0495645_0022101_1831_2373 | 180 |
| 22 | 3300046559 | Ga0495667_0039472 | Ga0495667_0039472_2482_3024 | 180 |
| 23 | 3300046675 | Ga0495657_0167346 | Ga0495657_0167346_567_1109 | 180 |
| 24 | 3300046678 | Ga0495599_0032848 | Ga0495599_0032848_1593_2135 | 180 |
| 25 | 3300046679 | Ga0495623_0071231 | Ga0495623_0071231_1097_1639 | 180 |
| 26 | 3300046679 | Ga0495623_0215268 | Ga0495623_0215268_530_1072 | 180 |
| 27 | 3300046680 | Ga0495646_0098780 | Ga0495646_0098780_231_773 | 180 |
| 28 | 3300046809 | Ga0495600_0089097 | Ga0495600_0089097_1360_1902 | 180 |
| 29 | 3300047317 | Ga0495604_0069440 | Ga0495604_0069440_598_1140 | 180 |
| 30 | 3300047319 | Ga0495674_0312451 | Ga0495674_0312451_432_974 | 180 |
| 31 | 3300047322 | Ga0495680_0567088 | Ga0495680_0567088_16_558 | 180 |
| 32 | 3300047444 | Ga0495675_0034451 | Ga0495675_0034451_371_913 | 180 |
| 33 | 3300047471 | Ga0495684_0002032 | Ga0495684_0002032_6312_6854 | 180 |
| 34 | 3300048088 | Ga0495602_0034366 | Ga0495602_0034366_2357_2899 | 180 |
| 35 | 3300049581 | Ga0501047_0095941 | Ga0501047_0095941_176_721 | 180 |
| 36 | 3300049744 | Ga0501083_0005709 | Ga0501083_0005709_4623_5168 | 180 |
| 37 | 3300053077 | Ga0495601_0234769 | Ga0495601_0234769_350_892 | 180 |
| 38 | 3300053078 | Ga0495612_0050900 | Ga0495612_0050900_206_748 | 180 |
| 39 | 3300053084 | Ga0495595_0022838 | Ga0495595_0022838_398_940 | 180 |
| 40 | 3300006846 | Ga0075430_100070912 | Ga0075430_1000709122 | 184 |
| 41 | 3300006880 | Ga0075429_100050918 | Ga0075429_1000509184 | 184 |
| 42 | 3300009147 | Ga0114129_10083571 | Ga0114129_100835714 | 184 |
| 43 | 3300050508 | nmdc:mga09592_10043_c1 | nmdc:mga09592_10043_c1_7022_7579 | 184 |
| 44 | 3300050509 | nmdc:mga0qj67_15316_c1 | nmdc:mga0qj67_15316_c1_2549_3106 | 184 |
| 45 | 3300050510 | nmdc:mga06r32_14050_c1 | nmdc:mga06r32_14050_c1_6356_6913 | 184 |
| 46 | 3300005337 | Ga0070682_100967806 | Ga0070682_1009678061 | 186 |
| 47 | 3300013297 | Ga0157378_11181865 | Ga0157378_111818652 | 186 |
| 48 | 3300005295 | Ga0065707_10084675 | Ga0065707_100846754 | 187 |
| 49 | 3300005331 | Ga0070670_100350869 | Ga0070670_1003508692 | 187 |
| 50 | 3300005354 | Ga0070675_100765574 | Ga0070675_1007655741 | 187 |
| 51 | 3300005466 | Ga0070685_10327911 | Ga0070685_103279112 | 187 |
| 52 | 3300005548 | Ga0070665_100511730 | Ga0070665_1005117302 | 187 |
| 53 | 3300005937 | Ga0081455_10002653 | Ga0081455_1000265318 | 187 |
| 54 | 3300006847 | Ga0075431_100347800 | Ga0075431_1003478003 | 187 |
| 55 | 3300009094 | Ga0111539_11079868 | Ga0111539_110798681 | 187 |
| 56 | 3300009177 | Ga0105248_10072074 | Ga0105248_100720743 | 187 |
| 57 | 3300013308 | Ga0157375_10238649 | Ga0157375_102386492 | 187 |
| 58 | 3300025925 | Ga0207650_10300417 | Ga0207650_103004172 | 187 |
| 59 | 3300025926 | Ga0207659_10320627 | Ga0207659_103206271 | 187 |
| 60 | 3300025936 | Ga0207670_10403030 | Ga0207670_104030301 | 187 |
| 61 | 3300026121 | Ga0207683_10656316 | Ga0207683_106563161 | 187 |
| 62 | 3300028379 | Ga0268266_11024502 | Ga0268266_110245021 | 187 |
| 63 | 3300028556 | Ga0265337_1011154 | Ga0265337_10111542 | 187 |
| 64 | 3300028800 | Ga0265338_10020106 | Ga0265338_100201065 | 187 |
| 65 | 3300031344 | Ga0265316_10025050 | Ga0265316_100250506 | 187 |
| 66 | 3300035118 | Ga0373954_0442741 | Ga0373954_0442741_65_628 | 187 |
| 67 | 3300035120 | Ga0373957_0165640 | Ga0373957_0165640_74_637 | 187 |
| 68 | 3300035172 | Ga0373955_0082632 | Ga0373955_0082632_441_1004 | 187 |
| 69 | 3300035724 | Ga0373933_0728691 | Ga0373933_0728691_79_642 | 187 |
| 70 | 3300036401 | Ga0373937_0061170 | Ga0373937_0061170_703_1266 | 187 |
| 71 | 3300041509 | Ga0451843_1247002 | Ga0451843_1247002_543_1106 | 187 |
| 72 | 3300044673 | Ga0453683_0000931 | Ga0453683_0000931_15673_16236 | 187 |
| 73 | 3300045051 | Ga0451576_0747267 | Ga0451576_0747267_377_940 | 187 |
| 74 | 3300046459 | Ga0495629_0011722 | Ga0495629_0011722_1660_2223 | 187 |
| 75 | 3300046475 | Ga0495639_0015304 | Ga0495639_0015304_483_1046 | 187 |
| 76 | 3300046499 | Ga0495594_0166693 | Ga0495594_0166693_579_1142 | 187 |
| 77 | 3300047315 | Ga0495581_0008891 | Ga0495581_0008891_276_839 | 187 |
| 78 | 3300047321 | Ga0495676_0051926 | Ga0495676_0051926_614_1177 | 187 |
| 79 | 3300009094 | Ga0111539_10232319 | Ga0111539_102323191 | 188 |
| 80 | 3300035111 | Ga0373923_0356669 | Ga0373923_0356669_64_684 | 188 |
| 81 | 3300046684 | Ga0495669_0029535 | Ga0495669_0029535_556_1122 | 188 |
| 82 | 3300053084 | Ga0495595_0048561 | Ga0495595_0048561_1228_1848 | 188 |
| 83 | 3300005445 | Ga0070708_100567680 | Ga0070708_1005676802 | 189 |
| 84 | 3300005468 | Ga0070707_100045342 | Ga0070707_1000453423 | 189 |
| 85 | 3300025922 | Ga0207646_10203627 | Ga0207646_102036272 | 189 |
| 86 | 3300047322 | Ga0495680_0193094 | Ga0495680_0193094_248_817 | 189 |
| 87 | 3300049568 | Ga0501031_0193983 | Ga0501031_0193983_505_1074 | 189 |
| 88 | 3300049587 | Ga0501071_0174935 | Ga0501071_0174935_753_1322 | 189 |
| 89 | 3300003322 | rootL2_10022175 | rootL2_100221751 | 190 |
| 90 | 3300005327 | Ga0070658_10549034 | Ga0070658_105490342 | 190 |
| 91 | 3300005329 | Ga0070683_100047449 | Ga0070683_1000474492 | 190 |
| 92 | 3300005329 | Ga0070683_100066653 | Ga0070683_1000666532 | 190 |
| 93 | 3300005331 | Ga0070670_100210662 | Ga0070670_1002106621 | 190 |
| 94 | 3300005338 | Ga0068868_100574020 | Ga0068868_1005740202 | 190 |
| 95 | 3300005364 | Ga0070673_100098819 | Ga0070673_1000988191 | 190 |
| 96 | 3300005365 | Ga0070688_100154596 | Ga0070688_1001545962 | 190 |
| 97 | 3300005466 | Ga0070685_10133071 | Ga0070685_101330712 | 190 |
| 98 | 3300005535 | Ga0070684_100155916 | Ga0070684_1001559162 | 190 |
| 99 | 3300005535 | Ga0070684_100167492 | Ga0070684_1001674922 | 190 |
| 100 | 3300005543 | Ga0070672_100163106 | Ga0070672_1001631062 | 190 |
| 101 | 3300005548 | Ga0070665_100280029 | Ga0070665_1002800292 | 190 |
| 102 | 3300005549 | Ga0070704_101089234 | Ga0070704_1010892342 | 190 |
| 103 | 3300005563 | Ga0068855_100154289 | Ga0068855_1001542892 | 190 |
| 104 | 3300005564 | Ga0070664_100201163 | Ga0070664_1002011632 | 190 |
| 105 | 3300005564 | Ga0070664_100220906 | Ga0070664_1002209061 | 190 |
| 106 | 3300005564 | Ga0070664_100729293 | Ga0070664_1007292932 | 190 |
| 107 | 3300005614 | Ga0068856_100524073 | Ga0068856_1005240731 | 190 |
| 108 | 3300005618 | Ga0068864_100048846 | Ga0068864_1000488464 | 190 |
| 109 | 3300005618 | Ga0068864_100238011 | Ga0068864_1002380112 | 190 |
| 110 | 3300005718 | Ga0068866_10173149 | Ga0068866_101731492 | 190 |
| 111 | 3300005842 | Ga0068858_100112495 | Ga0068858_1001124951 | 190 |
| 112 | 3300006028 | Ga0070717_10004616 | Ga0070717_100046162 | 190 |
| 113 | 3300006358 | Ga0068871_100541771 | Ga0068871_1005417712 | 190 |
| 114 | 3300006914 | Ga0075436_100747896 | Ga0075436_1007478961 | 190 |
| 115 | 3300007076 | Ga0075435_100117288 | Ga0075435_1001172882 | 190 |
| 116 | 3300007265 | Ga0099794_10000099 | Ga0099794_100000991 | 190 |
| 117 | 3300009094 | Ga0111539_10027103 | Ga0111539_100271035 | 190 |
| 118 | 3300009098 | Ga0105245_10085820 | Ga0105245_100858202 | 190 |
| 119 | 3300009098 | Ga0105245_11129719 | Ga0105245_111297192 | 190 |
| 120 | 3300009101 | Ga0105247_10087710 | Ga0105247_100877102 | 190 |
| 121 | 3300009148 | Ga0105243_10040733 | Ga0105243_100407333 | 190 |
| 122 | 3300009177 | Ga0105248_10998347 | Ga0105248_109983472 | 190 |
| 123 | 3300009553 | Ga0105249_11242710 | Ga0105249_112427102 | 190 |
| 124 | 3300010375 | Ga0105239_10064814 | Ga0105239_100648144 | 190 |
| 125 | 3300011119 | Ga0105246_10035734 | Ga0105246_100357342 | 190 |
| 126 | 3300011119 | Ga0105246_10145683 | Ga0105246_101456832 | 190 |
| 127 | 3300013102 | Ga0157371_10483977 | Ga0157371_104839772 | 190 |
| 128 | 3300013308 | Ga0157375_10229935 | Ga0157375_102299352 | 190 |
| 129 | 3300014326 | Ga0157380_10100715 | Ga0157380_101007152 | 190 |
| 130 | 3300014745 | Ga0157377_10182335 | Ga0157377_101823352 | 190 |
| 131 | 3300017792 | Ga0163161_10027808 | Ga0163161_100278084 | 190 |
| 132 | 3300025901 | Ga0207688_10106463 | Ga0207688_101064632 | 190 |
| 133 | 3300025908 | Ga0207643_10006388 | Ga0207643_100063883 | 190 |
| 134 | 3300025924 | Ga0207694_10653869 | Ga0207694_106538692 | 190 |
| 135 | 3300025926 | Ga0207659_10217416 | Ga0207659_102174162 | 190 |
| 136 | 3300025927 | Ga0207687_10202459 | Ga0207687_102024591 | 190 |
| 137 | 3300025927 | Ga0207687_10694262 | Ga0207687_106942622 | 190 |
| 138 | 3300025935 | Ga0207709_10139184 | Ga0207709_101391842 | 190 |
| 139 | 3300025940 | Ga0207691_10073706 | Ga0207691_100737063 | 190 |
| 140 | 3300025944 | Ga0207661_10255638 | Ga0207661_102556382 | 190 |
| 141 | 3300025945 | Ga0207679_10157461 | Ga0207679_101574612 | 190 |
| 142 | 3300025949 | Ga0207667_10814470 | Ga0207667_108144702 | 190 |
| 143 | 3300025961 | Ga0207712_10570887 | Ga0207712_105708871 | 190 |
| 144 | 3300025981 | Ga0207640_10076080 | Ga0207640_100760801 | 190 |
| 145 | 3300026023 | Ga0207677_10823095 | Ga0207677_108230952 | 190 |
| 146 | 3300026035 | Ga0207703_10079359 | Ga0207703_100793591 | 190 |
| 147 | 3300026041 | Ga0207639_10967776 | Ga0207639_109677762 | 190 |
| 148 | 3300026078 | Ga0207702_11142824 | Ga0207702_111428241 | 190 |
| 149 | 3300026088 | Ga0207641_11020996 | Ga0207641_110209961 | 190 |
| 150 | 3300026095 | Ga0207676_10283032 | Ga0207676_102830322 | 190 |
| 151 | 3300026142 | Ga0207698_10245274 | Ga0207698_102452742 | 190 |
| 152 | 3300027907 | Ga0207428_10029468 | Ga0207428_100294684 | 190 |
| 153 | 3300031548 | Ga0307408_100012278 | Ga0307408_1000122782 | 190 |
| 154 | 3300031731 | Ga0307405_10005378 | Ga0307405_100053784 | 190 |
| 155 | 3300031824 | Ga0307413_10092007 | Ga0307413_100920072 | 190 |
| 156 | 3300031852 | Ga0307410_10001851 | Ga0307410_100018513 | 190 |
| 157 | 3300031901 | Ga0307406_10001808 | Ga0307406_100018086 | 190 |
| 158 | 3300031903 | Ga0307407_10018489 | Ga0307407_100184891 | 190 |
| 159 | 3300031995 | Ga0307409_100000480 | Ga0307409_10000048010 | 190 |
| 160 | 3300032002 | Ga0307416_100000822 | Ga0307416_10000082210 | 190 |
| 161 | 3300032004 | Ga0307414_10117860 | Ga0307414_101178601 | 190 |
| 162 | 3300032126 | Ga0307415_100003077 | Ga0307415_10000307710 | 190 |
| 163 | 3300047322 | Ga0495680_0390873 | Ga0495680_0390873_209_781 | 190 |
| 164 | 3300048903 | Ga0496100_0366263 | Ga0496100_0366263_164_736 | 190 |
| 165 | 3300048907 | Ga0496104_0698562 | Ga0496104_0698562_148_732 | 190 |
| 166 | 3300048907 | Ga0496104_1043578 | Ga0496104_1043578_110_697 | 190 |
| 167 | 3300048911 | Ga0496108_0660247 | Ga0496108_0660247_113_700 | 190 |
| 168 | 3300048912 | Ga0496109_0080600 | Ga0496109_0080600_1625_2209 | 190 |
| 169 | 3300048912 | Ga0496109_0199516 | Ga0496109_0199516_1003_1575 | 190 |
| 170 | 3300048913 | Ga0496110_0270435 | Ga0496110_0270435_474_1058 | 190 |
| 171 | 3300048913 | Ga0496110_0480164 | Ga0496110_0480164_54_638 | 190 |
| 172 | 3300048913 | Ga0496110_0678772 | Ga0496110_0678772_162_734 | 190 |
| 173 | 3300048914 | Ga0496111_0122850 | Ga0496111_0122850_62_646 | 190 |
| 174 | 3300048915 | Ga0496112_1009207 | Ga0496112_1009207_11_598 | 190 |
| 175 | 3300048916 | Ga0496113_0769793 | Ga0496113_0769793_24_608 | 190 |
| 176 | 3300048917 | Ga0496114_1099204 | Ga0496114_1099204_60_644 | 190 |
| 177 | 3300049592 | Ga0501076_0194387 | Ga0501076_0194387_109_693 | 190 |
| 178 | 3300049593 | Ga0501077_0003910 | Ga0501077_0003910_506_1078 | 190 |
| 179 | 3300050511 | nmdc:mga08y16_20644_c1 | nmdc:mga08y16_20644_c1_2728_3312 | 190 |
| 180 | 3300050511 | nmdc:mga08y16_328738_c1 | nmdc:mga08y16_328738_c1_385_984 | 190 |
| 181 | 3300050513 | nmdc:mga0rr50_253135_c1 | nmdc:mga0rr50_253135_c1_282_866 | 190 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6c46-assembly3.cif.gz_E-2 | crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase from elizabethkingia anophelis nuhp1 | 0.9649 | 2 | 176 |
| 3ryk-assembly1.cif.gz_B | 1.63 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase (rfbc) from bacillus anthracis str. ames with tdp and ppi bound | 0.9631 | 2 | 174 |
| 6c46-assembly2.cif.gz_C | crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase from elizabethkingia anophelis nuhp1 | 0.9615 | 2 | 176 |
| 7pvi-assembly1.cif.gz_BBB | dtdp-sugar epimerase | 0.9533 | 2 | 176 |
| 5buv-assembly2.cif.gz_B-2 | x-ray structure of wbca from yersinia enterocolitica | 0.952 | 2 | 173 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5buvB00 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.952 | 2 | 173 | 2.60.120.10 |
| 1epzA00 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9415 | 2 | 176 | 2.60.120.10 |
| 2c0zA01 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9308 | 1 | 182 | 2.60.120.10 |
| 5buvB00 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9256 | 2 | 173 | 2.60.120.10 |
| 2b9uD00 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9234 | 3 | 176 | 2.60.120.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1Q6VP32-F1-model_v4 | dTDP-4-dehydrorhamnose 3,5-epimerase | 0.9994 | 1 | 145 |
GO:0005829
GO:0008830 GO:0019305 GO:0045226 |
| AF-A0A6L5FCZ6-F1-model_v4 | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) | 0.9988 | 1 | 187 |
GO:0005829
GO:0008830 GO:0019305 GO:0045226 |
| AF-A0A2Z2P1Z2-F1-model_v4 | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) | 0.9978 | 1 | 174 |
GO:0005829
GO:0008830 GO:0019305 GO:0045226 |
| AF-A0A845RPB3-F1-model_v4 | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) | 0.9968 | 1 | 171 |
GO:0005829
GO:0008830 GO:0019305 GO:0045226 |
| AF-A0A3D5H8T3-F1-model_v4 | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) | 0.9946 | 1 | 173 |
GO:0005829
GO:0008830 GO:0019305 GO:0045226 |
Predicted Structure (AlphaFold2)
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