F277238

General Info

Members Datasets Scaffolds Average Seq Length
181 158 362 416

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10087182|Ga0105240_100871822
Length 454
Sequence MSRRNVAAPLDWGARSEYWRGNAFEEHTKELDLTEIGDQATGIDRVAASVEEAAARLAEVVRRTPLERSERLSAAVGADVWLKREDLQPVRSYKLRGAYNLMAQLDDTAAGVVCASAGNHAQGVAYACAALEIKGCIYLPRTTPRQKRERIAAIGGPWVDIVIEGDNYDAAVAVAEAAARESGRRLVPAFDDLDTIAGQGTVAIEIVEQLGRAPDLLVVPVGGGGLLAGIAAWLRARHPAAEICGVEPVGAAGMRAALDAGGPVTLAELDSFVDGAAVRRVGDLTFPLVRDSGAELVELEPGAICAEMLRLYQTDGIIAEPAGALASGALGTKVSPAPGAQVVCILSGGNNDVSRYSEILERALVFEGLKHYFLVEFPQEPGMLRRFLDEVLGPTDDITLFEYVKRSNRETGPALVGIEIADRADLPALLARMNRSPMGIEPIDPDSPAFRFLL

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
19 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
20 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
21 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
22 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
23 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
24 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
25 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
26 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
52 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
53 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
54 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
57 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
58 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
59 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
62 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
65 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
66 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
67 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
68 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
69 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
70 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
71 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
72 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
73 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
74 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
75 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
76 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
77 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
78 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
79 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
80 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
95 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
96 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
97 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
98 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
99 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
100 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
101 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
104 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
107 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
108 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
109 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
110 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
111 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
112 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
113 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
114 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
115 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
116 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
117 2643221576 Nocardioides sp. Root614 Isolate Unclassified
118 2643221590 Nocardioides sp. Root682 Isolate Unclassified
119 2643221604 Nocardioides sp. Root190 Isolate Unclassified
120 2643221617 Nocardioides sp. Root79 Isolate Unclassified
121 2643221620 Nocardioides sp. Root240 Isolate Unclassified
122 2671180694 Paenibacillus sp. A3 Isolate Unclassified
123 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
124 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
125 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
126 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
127 2738541305 Nocardioides sp. CF167 Isolate Unclassified
128 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
129 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
130 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
131 2857472729 Cohnella sp. R-74144 Isolate Unclassified
132 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
133 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
134 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
135 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
136 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
137 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
138 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
139 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
140 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
141 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
142 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
143 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
144 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
145 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
146 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
147 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
148 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
149 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
150 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
151 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
152 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
153 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
154 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
155 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
156 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
157 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
158 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 72.93
Metatranscriptomes 0
Isolates 27.07

Biome Distribution

Category Percentage (%)
Aerial Root 1.1
Bulb 0
Endosphere 2.76
Nodule 1.1
Rhizoplane 3.31
Rhizosphere 65.19
Stem 0
Stem Tuber 0.55
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10087182 3300009093 Bacteria 3823
2 Ga0055538_1001328 3300003751 Bacteria 4961
3 Ga0070658_10000938 3300005327 Bacteria 24961
4 Ga0070683_100013188 3300005329 Bacteria 7198
5 Ga0070689_100073832 3300005340 Bacteria 2669
6 Ga0070668_100108002 3300005347 Bacteria 2212
7 Ga0070675_100189687 3300005354 Bacteria 1780
8 Ga0070667_100024434 3300005367 Bacteria 5018
9 Ga0070710_10000412 3300005437 Bacteria 20127
10 Ga0070700_100109096 3300005441 Bacteria 1837
11 Ga0070663_100047396 3300005455 Bacteria 3044
12 Ga0070685_10008759 3300005466 Bacteria 5209
13 Ga0070686_100032334 3300005544 Bacteria 3207
14 Ga0070665_100077637 3300005548 Bacteria 3327
15 Ga0068854_100126404 3300005578 Bacteria 1948
16 Ga0068862_100022922 3300005844 Bacteria 5227
17 Ga0075364_10000218 3300006051 Bacteria 27102
18 Ga0105244_10102903 3300009036 Bacteria 1396
19 Ga0105237_10000324 3300009545 Bacteria 67312
20 Ga0105237_10224647 3300009545 Bacteria 1878
21 Ga0105249_10016279 3300009553 Bacteria 6595
22 Ga0105239_10187112 3300010375 Bacteria 2317
23 Ga0157375_10248433 3300013308 Bacteria 1939
24 Ga0163163_10239919 3300014325 Bacteria 1862
25 Ga0163161_10116482 3300017792 Bacteria 2003
26 Ga0213875_10000425 3300021388 Bacteria 37004
27 Ga0209784_100242 3300025224 Bacteria 35290
28 Ga0209566_100148 3300025225 Bacteria 82384
29 Ga0207656_10057833 3300025321 Bacteria 1692
30 Ga0207655_1052369 3300025728 Bacteria 1642
31 Ga0207692_10000256 3300025898 Bacteria 18282
32 Ga0207688_10000995 3300025901 Bacteria 14450
33 Ga0207680_10019256 3300025903 Bacteria 3647
34 Ga0207680_10039902 3300025903 Bacteria 2728
35 Ga0207705_10000856 3300025909 Bacteria 24980
36 Ga0207654_10085663 3300025911 Bacteria 1908
37 Ga0207671_10000312 3300025914 Bacteria 71586
38 Ga0207644_10197093 3300025931 Bacteria 1587
39 Ga0207669_10049141 3300025937 Bacteria 2512
40 Ga0207704_10073654 3300025938 Bacteria 2176
41 Ga0207691_10089717 3300025940 Bacteria 2756
42 Ga0207711_10104415 3300025941 Bacteria 2511
43 Ga0207661_10137564 3300025944 Bacteria 2099
44 Ga0207679_10091002 3300025945 Bacteria 2360
45 Ga0207658_10006575 3300025986 Bacteria 7923
46 Ga0207703_10169989 3300026035 Bacteria 1916
47 Ga0207708_10086696 3300026075 Bacteria 2409
48 Ga0207648_10101937 3300026089 Bacteria 2515
49 Ga0207698_10069541 3300026142 Bacteria 2784
50 Ga0207428_10094716 3300027907 Bacteria 2314
51 Ga0268266_10000097 3300028379 Bacteria 184541
52 Ga0268266_10061846 3300028379 Bacteria 3229
53 Ga0265338_10000112 3300028800 Bacteria 151217
54 Ga0265338_10021250 3300028800 Bacteria 6778
55 Ga0314311_1125783 3300030733 Bacteria 15157
56 Ga0265342_10013453 3300031712 Bacteria 5488
57 Ga0307406_10187961 3300031901 Bacteria 1510
58 Ga0307411_10028837 3300032005 Bacteria 3380
59 Ga0307411_10052937 3300032005 Bacteria 2657
60 Ga0436364_0805120 3300037853 Bacteria 34759
61 Ga0466972_0042933 3300044658 Bacteria 2196
62 Ga0466965_0003646 3300044683 Bacteria 6788
63 Ga0466965_0003713 3300044683 Bacteria 6739
64 Ga0466965_0037019 3300044683 Bacteria 2395
65 Ga0466966_0059057 3300044684 Bacteria 2423
66 Ga0466963_0012145 3300044694 Bacteria 5265
67 Ga0453684_0003307 3300044712 Bacteria 36750
68 Ga0466960_0001286 3300044901 Bacteria 9106
69 Ga0451576_0017388 3300045051 Bacteria 7906
70 Ga0466967_0010614 3300045976 Bacteria 6922
71 Ga0495660_0102805 3300046810 Bacteria 1468
72 Ga0496100_0139418 3300048903 Bacteria 1717
73 Ga0496103_0026457 3300048906 Bacteria 3512
74 Ga0496104_0160378 3300048907 Bacteria 2157
75 Ga0496105_0004602 3300048908 Bacteria 10394
76 Ga0496108_0037620 3300048911 Bacteria 4032
77 Ga0496116_0006089 3300048919 Bacteria 11034
78 Ga0496116_0010597 3300048919 Bacteria 7708
79 Ga0496116_0014475 3300048919 Bacteria 6295
80 Ga0496117_0002874 3300048920 Bacteria 20917
81 Ga0496117_0012728 3300048920 Bacteria 7387
82 Ga0496118_0000289 3300048921 Bacteria 87537
83 Ga0496119_0002754 3300048922 Bacteria 18905
84 Ga0496119_0009722 3300048922 Bacteria 8188
85 Ga0496120_0001492 3300048923 Bacteria 27708
86 Ga0496120_0042309 3300048923 Bacteria 2661
87 Ga0496121_0006584 3300048924 Bacteria 14327
88 Ga0496121_0009338 3300048924 Bacteria 11301
89 Ga0496121_0014812 3300048924 Bacteria 8233
90 Ga0496122_0028646 3300048925 Bacteria 4719
91 Ga0496122_0121794 3300048925 Bacteria 1680
92 Ga0496124_0027257 3300048927 Bacteria 5133
93 Ga0496124_0076485 3300048927 Bacteria 2763
94 Ga0496124_0168041 3300048927 Bacteria 1702
95 Ga0496125_0001168 3300048928 Bacteria 39759
96 Ga0496125_0021329 3300048928 Bacteria 6047
97 Ga0496126_0002471 3300048929 Bacteria 24885
98 Ga0496126_0009938 3300048929 Bacteria 10047
99 Ga0496126_0036404 3300048929 Bacteria 4602
100 Ga0501031_0001900 3300049568 Bacteria 13182
101 Ga0501031_0035044 3300049568 Bacteria 3274
102 Ga0501032_0001024 3300049569 Bacteria 22456
103 Ga0501033_0007572 3300049570 Bacteria 8447
104 Ga0501034_0033098 3300049571 Bacteria 5248
105 Ga0501036_0008921 3300049572 Bacteria 8241
106 Ga0501037_0006787 3300049573 Bacteria 8366
107 Ga0501038_0011083 3300049574 Bacteria 8232
108 Ga0501039_0015525 3300049575 Bacteria 5830
109 Ga0501040_0103417 3300049576 Bacteria 1988
110 Ga0501042_0010957 3300049578 Bacteria 6104
111 Ga0501043_0007983 3300049579 Bacteria 8360
112 Ga0501046_0002444 3300049580 Bacteria 17414
113 Ga0501047_0004424 3300049581 Bacteria 13227
114 Ga0501048_0002918 3300049582 Bacteria 13059
115 Ga0501067_0072799 3300049583 Bacteria 1904
116 Ga0501068_0006249 3300049584 Bacteria 6553
117 Ga0501069_0006463 3300049585 Bacteria 6130
118 Ga0501070_0008787 3300049586 Bacteria 8541
119 Ga0501070_0090404 3300049586 Bacteria 2534
120 Ga0501071_0054615 3300049587 Bacteria 2882
121 Ga0501073_0010960 3300049589 Bacteria 6633
122 Ga0501074_0007141 3300049590 Bacteria 8070
123 Ga0501074_0016764 3300049590 Bacteria 5316
124 Ga0501079_0007503 3300049741 Bacteria 8248
125 Ga0501080_0011108 3300049742 Bacteria 8241
126 Ga0501083_0006631 3300049744 Bacteria 8214
127 Ga0501035_0010783 3300049822 Bacteria 8462
128 Ga0501044_0006276 3300049823 Bacteria 13137
129 Ga0501045_0014085 3300049824 Bacteria 5663
130 nmdc:mga00v17_493_c1 3300050491 Bacteria 22178
131 nmdc:mga08y16_139624_c1 3300050511 Bacteria 2519
132 Ga0501082_0009992 3300060353 Bacteria 8182
133 2550902221 2548877040 Bacteria 7507281
134 2571528125 2571042143 Bacteria 6986194
135 2578335153 2576861424 Bacteria 5270569
136 2580935146 2579778775 Bacteria 5360914
137 2595318409 2593339198 Bacteria 7267884
138 2601641408 2600255286 Bacteria 5390125
139 2621273373 2619619294 Bacteria 5575484
140 2643890521 2643221576 Bacteria 5214352
141 2643959577 2643221590 Bacteria 5214697
142 2644032970 2643221604 Bacteria 5014917
143 2644100530 2643221617 Bacteria 5139111
144 2644116938 2643221620 Bacteria 5134593
145 2673819771 2671180694 Bacteria 7506943
146 2723602217 2721755693 Bacteria 6126117
147 2728532633 2728368933 Bacteria 7044283
148 2729909018 2728369276 Bacteria 5610032
149 2730138290 2728369359 Bacteria 5621728
150 2738871914 2738541305 Bacteria 4910150
151 2753812828 2751185905 Bacteria 6142767
152 2802439577 2802428803 Bacteria 5806948
153 2816508284 2816332139 Bacteria 9138787
154 2857474224 2857472729 Bacteria 6568124
155 2864998910 2864997549 Bacteria 5139696
156 2881641626 2881636855 Bacteria 5205297
157 2889278298 2889276214 Bacteria 5979355
158 2899375669 2899370129 Bacteria 6781179
159 2904600088 2904595352 Bacteria 6124848
160 2938654105 2938649242 Bacteria 7118381
161 2939706328 2939702853 Bacteria 5139229
162 2968563282 2968558590 Bacteria 6956864
163 2971407744 2971403814 Bacteria 7370929
164 2971516289 2971511577 Bacteria 5404012
165 2980126426 2980125574 Bacteria 5567337
166 2980181740 2980176882 Bacteria 5397533
167 2984578311 2984576629 Bacteria 4248407
168 2988229137 2988225383 Bacteria 7221625
169 2990257823 2990256926 Bacteria 4252839
170 2996634425 2996632988 Bacteria 6921523
171 2996710886 2996706504 Bacteria 5757485
172 3001270958 3001267043 Bacteria 4823521
173 3001889682 3001889506 Bacteria 2975194
174 648168722 648028048 Bacteria 5394884
175 8002322692 8002317523 Bacteria 8051857
176 8046993248 8046991243 Bacteria 8497463
177 8047716411 8047710418 Bacteria 11023148
178 8054466007 8054465665 Bacteria 7323556
179 8054610323 8054609563 Bacteria 5170090
180 8054800494 8054795415 Bacteria 9785225
181 8055636517 8055632911 Bacteria 5283357
182 Ga0105240_10087182
183 Ga0055538_1001328
184 Ga0070658_10000938
185 Ga0070683_100013188
186 Ga0070689_100073832
187 Ga0070668_100108002
188 Ga0070675_100189687
189 Ga0070667_100024434
190 Ga0070710_10000412
191 Ga0070700_100109096
192 Ga0070663_100047396
193 Ga0070685_10008759
194 Ga0070686_100032334
195 Ga0070665_100077637
196 Ga0068854_100126404
197 Ga0068862_100022922
198 Ga0075364_10000218
199 Ga0105244_10102903
200 Ga0105237_10000324
201 Ga0105237_10224647
202 Ga0105249_10016279
203 Ga0105239_10187112
204 Ga0157375_10248433
205 Ga0163163_10239919
206 Ga0163161_10116482
207 Ga0213875_10000425
208 Ga0209784_100242
209 Ga0209566_100148
210 Ga0207656_10057833
211 Ga0207655_1052369
212 Ga0207692_10000256
213 Ga0207688_10000995
214 Ga0207680_10019256
215 Ga0207680_10039902
216 Ga0207705_10000856
217 Ga0207654_10085663
218 Ga0207671_10000312
219 Ga0207644_10197093
220 Ga0207669_10049141
221 Ga0207704_10073654
222 Ga0207691_10089717
223 Ga0207711_10104415
224 Ga0207661_10137564
225 Ga0207679_10091002
226 Ga0207658_10006575
227 Ga0207703_10169989
228 Ga0207708_10086696
229 Ga0207648_10101937
230 Ga0207698_10069541
231 Ga0207428_10094716
232 Ga0268266_10000097
233 Ga0268266_10061846
234 Ga0265338_10000112
235 Ga0265338_10021250
236 Ga0314311_1125783
237 Ga0265342_10013453
238 Ga0307406_10187961
239 Ga0307411_10028837
240 Ga0307411_10052937
241 Ga0436364_0805120
242 Ga0466972_0042933
243 Ga0466965_0003646
244 Ga0466965_0003713
245 Ga0466965_0037019
246 Ga0466966_0059057
247 Ga0466963_0012145
248 Ga0453684_0003307
249 Ga0466960_0001286
250 Ga0451576_0017388
251 Ga0466967_0010614
252 Ga0495660_0102805
253 Ga0496100_0139418
254 Ga0496103_0026457
255 Ga0496104_0160378
256 Ga0496105_0004602
257 Ga0496108_0037620
258 Ga0496116_0006089
259 Ga0496116_0010597
260 Ga0496116_0014475
261 Ga0496117_0002874
262 Ga0496117_0012728
263 Ga0496118_0000289
264 Ga0496119_0002754
265 Ga0496119_0009722
266 Ga0496120_0001492
267 Ga0496120_0042309
268 Ga0496121_0006584
269 Ga0496121_0009338
270 Ga0496121_0014812
271 Ga0496122_0028646
272 Ga0496122_0121794
273 Ga0496124_0027257
274 Ga0496124_0076485
275 Ga0496124_0168041
276 Ga0496125_0001168
277 Ga0496125_0021329
278 Ga0496126_0002471
279 Ga0496126_0009938
280 Ga0496126_0036404
281 Ga0501031_0001900
282 Ga0501031_0035044
283 Ga0501032_0001024
284 Ga0501033_0007572
285 Ga0501034_0033098
286 Ga0501036_0008921
287 Ga0501037_0006787
288 Ga0501038_0011083
289 Ga0501039_0015525
290 Ga0501040_0103417
291 Ga0501042_0010957
292 Ga0501043_0007983
293 Ga0501046_0002444
294 Ga0501047_0004424
295 Ga0501048_0002918
296 Ga0501067_0072799
297 Ga0501068_0006249
298 Ga0501069_0006463
299 Ga0501070_0008787
300 Ga0501070_0090404
301 Ga0501071_0054615
302 Ga0501073_0010960
303 Ga0501074_0007141
304 Ga0501074_0016764
305 Ga0501079_0007503
306 Ga0501080_0011108
307 Ga0501083_0006631
308 Ga0501035_0010783
309 Ga0501044_0006276
310 Ga0501045_0014085
311 nmdc:mga00v17_493_c1
312 nmdc:mga08y16_139624_c1
313 Ga0501082_0009992
314 2550902221
315 2571528125
316 2578335153
317 2580935146
318 2595318409
319 2601641408
320 2621273373
321 2643890521
322 2643959577
323 2644032970
324 2644100530
325 2644116938
326 2673819771
327 2723602217
328 2728532633
329 2729909018
330 2730138290
331 2738871914
332 2753812828
333 2802439577
334 2816508284
335 2857474224
336 2864998910
337 2881641626
338 2889278298
339 2899375669
340 2904600088
341 2938654105
342 2939706328
343 2968563282
344 2971407744
345 2971516289
346 2980126426
347 2980181740
348 2984578311
349 2988229137
350 2990257823
351 2996634425
352 2996710886
353 3001270958
354 3001889682
355 648168722
356 8002322692
357 8046993248
358 8047716411
359 8054466007
360 8054610323
361 8054800494
362 8055636517

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00585

Thr_dehydrat_C

C-terminal regulatory domain of Threonine dehydratase

361

453

0.98

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

57

348

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3iau-assembly1.cif.gz_A the structure of the processed form of threonine deaminase isoform 2 from solanum lycopersicum 0.9622 14 331
2gn2-assembly1.cif.gz_A crystal structure of tetrameric biodegradative threonine deaminase (tdcb) from salmonella typhimurium in complex with cmp at 2.5a resolution (hexagonal form) 0.9605 11 329
1ve5-assembly1.cif.gz_A crystal structure of t.th. hb8 threonine deaminase 0.9523 12 320
2zpu-assembly1.cif.gz_A crystal structure of modified serine racemase from s.pombe. 0.9515 11 329
1ve5-assembly1.cif.gz_B crystal structure of t.th. hb8 threonine deaminase 0.9501 12 320
ID Description Score Start End Superfamily
af_P9WG95_65_164_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 1.003 60 158 3.40.50.1100
af_Q2FWJ9_55_154_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 1.002 60 158 3.40.50.1100
af_P9WG95_65_164_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9829 60 158 3.40.50.1100
af_Q2FWJ9_55_154_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9819 60 158 3.40.50.1100
2gn1B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9734 61 158 3.40.50.1100
ID Description Score Start End GO Terms
AF-A0A261GPY7-F1-model_v4 Threonine dehydratase 0.995 12 331 GO:0003941
GO:0004794
GO:0006565
GO:0006567
GO:0009097
GO:0016020
AF-A0A0B0HF66-F1-model_v4 deleted 0.995 33 251
AF-W1UKV5-F1-model_v4 Threonine dehydratase 0.9942 11 325 GO:0003941
GO:0004794
GO:0006565
GO:0006567
GO:0009097
GO:0030170
AF-A0A4S0IHD4-F1-model_v4 deleted 0.993 23 268
AF-A0A6I3U900-F1-model_v4 Pyridoxal-phosphate dependent enzyme 0.9927 210 290 GO:0003941
GO:0004794
GO:0006565
GO:0006567
GO:0009097

Map