F276856
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 181 | 146 | 171 | 632 |
Family's Representative Sequence
| Representative Sequence | 3300005366|Ga0070659_100020034|Ga0070659_1000200342 |
| Length | 703 |
| Sequence | MAEMTAVRDVTKEQLPYVEPDKPRRTRWKLLAILGVWLIGYAALKGQMTRALGLQDTTALHQKLNDARDWVQLEGKDNWFFGGVLGGIGDALKATVDFCQQLISIPAYPRPVPEIGWLGVVAIMAYLTYVFAGLRSTILVTAALLFFGVTGLWSSSMDLLIVTLLSVIICMALGIPLGIAMARSKSTSAVVTPVMDVLQTLPAFCYLAPLALFFGIGSGAAVALTILYALPPLVRITEHAIHTVPETTVEAARSMGLTQRQMLRHVQLPMARRTIVVGINQCMMAALSMATIAALVGGPGLGLPVVQALQIQNVGAASVAGLAIVAMAIMLDRTTTAASERGTGRSDVGASSGMGVTLTKVVLVRLPRWAKEDAGRGQRLPRVTPAGRAFLLAVLLLPVAVCVWLSRTQLDYAKFPDVSDTPVLKYLSGPKLTKAINDFTAWFIDHFDTVTLWLKDHVTSWLINPLQDLLALSPWWLMALVLLAVAYVLGGWRPAAVTVVCEAIIFATGLWNDTMITLSMTLIATGLVMLIAVFLGVSMGRSRRADVAIRPFLDAFQTIPPFVYLVPALALFLPGRFTAIVAATAYAVPIATKLVADGIRGVAPTTVEAARSAGITRRQMIAKVQLPMARESLVLATNQGLLYVLSMVVIGGMVGGGSLGYIVVSGFSQDQLFGKGLAAGVAIAALGVMLDRIARYAAARYGR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221561 | Nocardioides sp. Root151 | Isolate | Unclassified |
| 2 | 2643221576 | Nocardioides sp. Root614 | Isolate | Unclassified |
| 3 | 2643221590 | Nocardioides sp. Root682 | Isolate | Unclassified |
| 4 | 2643221615 | Nocardioides sp. Root224 | Isolate | Unclassified |
| 5 | 2643221657 | Nocardioides sp. Root1257 | Isolate | Unclassified |
| 6 | 2643221696 | Nocardioides sp. Root140 | Isolate | Unclassified |
| 7 | 2808606439 | Nocardioides sp. SLBN-172 | Isolate | Unclassified |
| 8 | 2811994878 | Nocardioides sp. SLBN-169 | Isolate | Unclassified |
| 9 | 2919051321 | Sinomonas atrocyanea 1003 | Isolate | Rhizosphere |
| 10 | 2946024296 | Arthrobacter woluwensis W4I2 | Isolate | Rhizosphere |
| 11 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 12 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 13 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 18 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 27 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 28 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 29 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 30 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 31 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 32 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 33 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 34 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 36 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 37 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 38 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 39 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 40 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 41 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 42 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 43 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 44 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 45 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 46 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 47 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 48 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 49 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 50 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 84 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 86 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 87 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 88 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 89 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 90 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 91 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 92 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 93 | 3300041451 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG | Metagenome | Rhizoplane |
| 94 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 95 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 96 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 97 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 98 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 99 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 100 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 101 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 102 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 103 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 104 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 105 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 106 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 107 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 109 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 110 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 111 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 134 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 135 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 136 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 137 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 138 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 139 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 140 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 144 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 145 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 146 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.48 |
| Metatranscriptomes | 0 |
| Isolates | 5.52 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.63 |
| Nodule | 0 |
| Rhizoplane | 8.29 |
| Rhizosphere | 80.11 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.97 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24737J22298_10007593 | 3300001990 | Bacteria | 3654 |
| 2 | JGI25406J46586_10013139 | 3300003203 | Bacteria | 3569 |
| 3 | Ga0070658_10020123 | 3300005327 | Bacteria | 5346 |
| 4 | Ga0070683_100003958 | 3300005329 | Bacteria | 12125 |
| 5 | Ga0070680_100048563 | 3300005336 | Bacteria | 3459 |
| 6 | Ga0070660_100040743 | 3300005339 | Bacteria | 3537 |
| 7 | Ga0070687_100015798 | 3300005343 | Bacteria | 3422 |
| 8 | Ga0070668_100011652 | 3300005347 | Bacteria | 6544 |
| 9 | Ga0070675_100062278 | 3300005354 | Bacteria | 3082 |
| 10 | Ga0070673_100018660 | 3300005364 | Bacteria | 4961 |
| 11 | Ga0070659_100020034 | 3300005366 | Bacteria | 5079 |
| 12 | Ga0070667_100089299 | 3300005367 | Bacteria | 2647 |
| 13 | Ga0070701_10006559 | 3300005438 | Bacteria | 4906 |
| 14 | Ga0070678_100038795 | 3300005456 | Bacteria | 3355 |
| 15 | Ga0070662_100017179 | 3300005457 | Bacteria | 4871 |
| 16 | Ga0070662_100018167 | 3300005457 | Bacteria | 4752 |
| 17 | Ga0068867_100053069 | 3300005459 | Bacteria | 2993 |
| 18 | Ga0070685_10006372 | 3300005466 | Bacteria | 6013 |
| 19 | Ga0070707_100036194 | 3300005468 | Bacteria | 4710 |
| 20 | Ga0070698_100001100 | 3300005471 | Bacteria | 29758 |
| 21 | Ga0070679_100004863 | 3300005530 | Bacteria | 12399 |
| 22 | Ga0070684_100069860 | 3300005535 | Bacteria | 3089 |
| 23 | Ga0070684_100083926 | 3300005535 | Bacteria | 2823 |
| 24 | Ga0070686_100008001 | 3300005544 | Bacteria | 5909 |
| 25 | Ga0068855_100163341 | 3300005563 | Bacteria | 2526 |
| 26 | Ga0070664_100112441 | 3300005564 | Bacteria | 2378 |
| 27 | Ga0068854_100009399 | 3300005578 | Bacteria | 6313 |
| 28 | Ga0068852_100027382 | 3300005616 | Bacteria | 4645 |
| 29 | Ga0068858_100033677 | 3300005842 | Bacteria | 4752 |
| 30 | Ga0068860_100000504 | 3300005843 | Bacteria | 48482 |
| 31 | Ga0068860_100061939 | 3300005843 | Bacteria | 3555 |
| 32 | Ga0081455_10004693 | 3300005937 | Bacteria | 15204 |
| 33 | Ga0081455_10043219 | 3300005937 | Bacteria | 3944 |
| 34 | Ga0081538_10023625 | 3300005981 | Bacteria | 4412 |
| 35 | Ga0081539_10000607 | 3300005985 | Bacteria | 72839 |
| 36 | Ga0081539_10013918 | 3300005985 | Bacteria | 6007 |
| 37 | Ga0075365_10010777 | 3300006038 | Bacteria | 5343 |
| 38 | Ga0075365_10011065 | 3300006038 | Bacteria | 5289 |
| 39 | Ga0075365_10029118 | 3300006038 | Bacteria | 3526 |
| 40 | Ga0075363_100009021 | 3300006048 | Bacteria | 4676 |
| 41 | Ga0075364_10036038 | 3300006051 | Bacteria | 3198 |
| 42 | Ga0075367_10003173 | 3300006178 | Bacteria | 7753 |
| 43 | Ga0075367_10052386 | 3300006178 | Bacteria | 2415 |
| 44 | Ga0075428_100008576 | 3300006844 | Bacteria | 11338 |
| 45 | Ga0075430_100023384 | 3300006846 | Bacteria | 5260 |
| 46 | Ga0075431_100001501 | 3300006847 | Bacteria | 21610 |
| 47 | Ga0075429_100000350 | 3300006880 | Bacteria | 33659 |
| 48 | Ga0105240_10142878 | 3300009093 | Bacteria | 2860 |
| 49 | Ga0111539_10053172 | 3300009094 | Bacteria | 4821 |
| 50 | Ga0111539_10080251 | 3300009094 | Bacteria | 3838 |
| 51 | Ga0105245_10095246 | 3300009098 | Bacteria | 2746 |
| 52 | Ga0105247_10010072 | 3300009101 | Bacteria | 5726 |
| 53 | Ga0105243_10015326 | 3300009148 | Bacteria | 5798 |
| 54 | Ga0105242_10042221 | 3300009176 | Bacteria | 3681 |
| 55 | Ga0105248_10058438 | 3300009177 | Bacteria | 4332 |
| 56 | Ga0163162_10043356 | 3300013306 | Bacteria | 4505 |
| 57 | Ga0157375_10027308 | 3300013308 | Bacteria | 5335 |
| 58 | Ga0163163_10041784 | 3300014325 | Bacteria | 4486 |
| 59 | Ga0163163_10117405 | 3300014325 | Bacteria | 2692 |
| 60 | Ga0157380_10028672 | 3300014326 | Bacteria | 4247 |
| 61 | Ga0157376_10017438 | 3300014969 | Bacteria | 5477 |
| 62 | Ga0163161_10006905 | 3300017792 | Bacteria | 7853 |
| 63 | Ga0207680_10007039 | 3300025903 | Bacteria | 5464 |
| 64 | Ga0207647_10004098 | 3300025904 | Bacteria | 10822 |
| 65 | Ga0207643_10006693 | 3300025908 | Bacteria | 6181 |
| 66 | Ga0207643_10008964 | 3300025908 | Bacteria | 5371 |
| 67 | Ga0207671_10017664 | 3300025914 | Bacteria | 5494 |
| 68 | Ga0207660_10032623 | 3300025917 | Bacteria | 3596 |
| 69 | Ga0207657_10015512 | 3300025919 | Bacteria | 7379 |
| 70 | Ga0207657_10036893 | 3300025919 | Bacteria | 4372 |
| 71 | Ga0207652_10012647 | 3300025921 | Bacteria | 6825 |
| 72 | Ga0207646_10046599 | 3300025922 | Bacteria | 3889 |
| 73 | Ga0207690_10019455 | 3300025932 | Bacteria | 4182 |
| 74 | Ga0207706_10008146 | 3300025933 | Bacteria | 9670 |
| 75 | Ga0207709_10031655 | 3300025935 | Bacteria | 3092 |
| 76 | Ga0207691_10004612 | 3300025940 | Bacteria | 13342 |
| 77 | Ga0207691_10044861 | 3300025940 | Bacteria | 4068 |
| 78 | Ga0207661_10006734 | 3300025944 | Bacteria | 8132 |
| 79 | Ga0207658_10044393 | 3300025986 | Bacteria | 3236 |
| 80 | Ga0207639_10015204 | 3300026041 | Bacteria | 5424 |
| 81 | Ga0207678_10109649 | 3300026067 | Bacteria | 2354 |
| 82 | Ga0207708_10000421 | 3300026075 | Bacteria | 33075 |
| 83 | Ga0207708_10011444 | 3300026075 | Bacteria | 6609 |
| 84 | Ga0207708_10035241 | 3300026075 | Bacteria | 3808 |
| 85 | Ga0207648_10004633 | 3300026089 | Bacteria | 14080 |
| 86 | Ga0207648_10049720 | 3300026089 | Bacteria | 3667 |
| 87 | Ga0207675_100003105 | 3300026118 | Bacteria | 16284 |
| 88 | Ga0207675_100010479 | 3300026118 | Bacteria | 8682 |
| 89 | Ga0207683_10085602 | 3300026121 | Bacteria | 2802 |
| 90 | Ga0207428_10056705 | 3300027907 | Bacteria | 3112 |
| 91 | Ga0268264_10000220 | 3300028381 | Bacteria | 111692 |
| 92 | Ga0268264_10050177 | 3300028381 | Bacteria | 3473 |
| 93 | Ga0307410_10020015 | 3300031852 | Bacteria | 4085 |
| 94 | Ga0307407_10004578 | 3300031903 | Bacteria | 5889 |
| 95 | Ga0307409_100012112 | 3300031995 | Bacteria | 5477 |
| 96 | Ga0307409_100020844 | 3300031995 | Bacteria | 4478 |
| 97 | Ga0307416_100012302 | 3300032002 | Bacteria | 5759 |
| 98 | Ga0307416_100102114 | 3300032002 | Bacteria | 2499 |
| 99 | Ga0395899_0048829 | 3300037312 | Bacteria | 3147 |
| 100 | Ga0395898_0015662 | 3300037466 | Bacteria | 7770 |
| 101 | Ga0395898_0023092 | 3300037466 | Bacteria | 6290 |
| 102 | Ga0395905_0022256 | 3300037471 | Bacteria | 5998 |
| 103 | Ga0395901_0012805 | 3300038443 | Bacteria | 8506 |
| 104 | Ga0395901_0052648 | 3300038443 | Bacteria | 4230 |
| 105 | Ga0451791_0598682 | 3300041451 | Bacteria | 2526 |
| 106 | Ga0451853_2151891 | 3300041512 | Bacteria | 2978 |
| 107 | Ga0466963_0011605 | 3300044694 | Bacteria | 5363 |
| 108 | Ga0466964_0007886 | 3300044706 | Bacteria | 3988 |
| 109 | Ga0466970_0005984 | 3300044765 | Bacteria | 6059 |
| 110 | Ga0466970_0006291 | 3300044765 | Bacteria | 5930 |
| 111 | Ga0466960_0000142 | 3300044901 | Bacteria | 24451 |
| 112 | Ga0466960_0013415 | 3300044901 | Bacteria | 3482 |
| 113 | Ga0466960_0022143 | 3300044901 | Bacteria | 2838 |
| 114 | Ga0466967_0004728 | 3300045976 | Bacteria | 9260 |
| 115 | Ga0466967_0099848 | 3300045976 | Bacteria | 2651 |
| 116 | Ga0496100_0073441 | 3300048903 | Bacteria | 2289 |
| 117 | Ga0496102_0031610 | 3300048905 | Bacteria | 4749 |
| 118 | Ga0496104_0112157 | 3300048907 | Bacteria | 2615 |
| 119 | Ga0496105_0035014 | 3300048908 | Bacteria | 4132 |
| 120 | Ga0496106_0007402 | 3300048909 | Bacteria | 8111 |
| 121 | Ga0496107_0070239 | 3300048910 | Bacteria | 2542 |
| 122 | Ga0496108_0058489 | 3300048911 | Bacteria | 3240 |
| 123 | Ga0496109_0010389 | 3300048912 | Bacteria | 7949 |
| 124 | Ga0496109_0020401 | 3300048912 | Bacteria | 5853 |
| 125 | Ga0496109_0086966 | 3300048912 | Bacteria | 2887 |
| 126 | Ga0496110_0013686 | 3300048913 | Bacteria | 6720 |
| 127 | Ga0496110_0041108 | 3300048913 | Bacteria | 4033 |
| 128 | Ga0496111_0048033 | 3300048914 | Bacteria | 3074 |
| 129 | Ga0496115_0039139 | 3300048918 | Bacteria | 3765 |
| 130 | Ga0501031_0011051 | 3300049568 | Bacteria | 5883 |
| 131 | Ga0501032_0012338 | 3300049569 | Bacteria | 6109 |
| 132 | Ga0501036_0018773 | 3300049572 | Bacteria | 5799 |
| 133 | Ga0501038_0017754 | 3300049574 | Bacteria | 6431 |
| 134 | Ga0501039_0029483 | 3300049575 | Bacteria | 4226 |
| 135 | Ga0501040_0016692 | 3300049576 | Bacteria | 4865 |
| 136 | Ga0501041_0001057 | 3300049577 | Bacteria | 15059 |
| 137 | Ga0501042_0032300 | 3300049578 | Bacteria | 3706 |
| 138 | Ga0501046_0023391 | 3300049580 | Bacteria | 5085 |
| 139 | Ga0501048_0006894 | 3300049582 | Bacteria | 8635 |
| 140 | Ga0501067_0002742 | 3300049583 | Bacteria | 9686 |
| 141 | Ga0501068_0008643 | 3300049584 | Bacteria | 5676 |
| 142 | Ga0501069_0011175 | 3300049585 | Bacteria | 4764 |
| 143 | Ga0501070_0009931 | 3300049586 | Bacteria | 8047 |
| 144 | Ga0501071_0002330 | 3300049587 | Bacteria | 11464 |
| 145 | Ga0501071_0012187 | 3300049587 | Bacteria | 5820 |
| 146 | Ga0501072_0003167 | 3300049588 | Bacteria | 12382 |
| 147 | Ga0501073_0005312 | 3300049589 | Bacteria | 9661 |
| 148 | Ga0501074_0004289 | 3300049590 | Bacteria | 10181 |
| 149 | Ga0501074_0005443 | 3300049590 | Bacteria | 9157 |
| 150 | Ga0501074_0084894 | 3300049590 | Bacteria | 2269 |
| 151 | Ga0501075_0012788 | 3300049591 | Bacteria | 5973 |
| 152 | Ga0501077_0007458 | 3300049593 | Bacteria | 6748 |
| 153 | Ga0501079_0014079 | 3300049741 | Bacteria | 6098 |
| 154 | Ga0501080_0030089 | 3300049742 | Bacteria | 5057 |
| 155 | Ga0501081_0004122 | 3300049743 | Bacteria | 9312 |
| 156 | nmdc:mga00v17_27189_c1 | 3300050491 | Bacteria | 3338 |
| 157 | nmdc:mga06z11_28623_c1 | 3300050494 | Bacteria | 2676 |
| 158 | nmdc:mga06z11_6568_c1 | 3300050494 | Bacteria | 4745 |
| 159 | nmdc:mga07m45_19582_c1 | 3300050496 | Bacteria | 3668 |
| 160 | nmdc:mga05p37_3158_c1 | 3300050507 | Bacteria | 19174 |
| 161 | nmdc:mga09592_4125_c1 | 3300050508 | Bacteria | 11736 |
| 162 | nmdc:mga0qj67_28179_c1 | 3300050509 | Bacteria | 4358 |
| 163 | nmdc:mga06r32_2321_c1 | 3300050510 | Bacteria | 17031 |
| 164 | nmdc:mga06r32_251_c1 | 3300050510 | Bacteria | 44202 |
| 165 | nmdc:mga08y16_7365_c1 | 3300050511 | Bacteria | 11540 |
| 166 | Ga0495601_0012139 | 3300053077 | Bacteria | 5165 |
| 167 | Ga0500641_0003227 | 3300053096 | Bacteria | 5762 |
| 168 | Ga0501084_0005964 | 3300054114 | Bacteria | 10029 |
| 169 | Ga0501084_0075751 | 3300054114 | Bacteria | 2819 |
| 170 | Ga0501082_0013204 | 3300060353 | Bacteria | 7103 |
| 171 | Ga0530510_0021300 | 3300061734 | Bacteria | 4612 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005438 | Ga0070701_10006559 | Ga0070701_100065593 | 506 |
| 2 | 3300009148 | Ga0105243_10015326 | Ga0105243_100153263 | 506 |
| 3 | 3300025940 | Ga0207691_10004612 | Ga0207691_100046122 | 506 |
| 4 | 3300026089 | Ga0207648_10004633 | Ga0207648_1000463312 | 506 |
| 5 | 3300005843 | Ga0068860_100000504 | Ga0068860_10000050449 | 507 |
| 6 | 3300028381 | Ga0268264_10000220 | Ga0268264_1000022012 | 507 |
| 7 | 3300005616 | Ga0068852_100027382 | Ga0068852_1000273822 | 510 |
| 8 | 3300026075 | Ga0207708_10000421 | Ga0207708_1000042128 | 510 |
| 9 | 3300026118 | Ga0207675_100003105 | Ga0207675_1000031053 | 510 |
| 10 | 3300025908 | Ga0207643_10008964 | Ga0207643_100089643 | 512 |
| 11 | 3300044901 | Ga0466960_0022143 | Ga0466960_0022143_733_2808 | 520 |
| 12 | 3300025986 | Ga0207658_10044393 | Ga0207658_100443932 | 522 |
| 13 | 3300026121 | Ga0207683_10085602 | Ga0207683_100856022 | 526 |
| 14 | 3300045976 | Ga0466967_0099848 | Ga0466967_0099848_485_2590 | 529 |
| 15 | 3300013308 | Ga0157375_10027308 | Ga0157375_100273082 | 530 |
| 16 | 3300013306 | Ga0163162_10043356 | Ga0163162_100433562 | 531 |
| 17 | 3300014325 | Ga0163163_10041784 | Ga0163163_100417843 | 531 |
| 18 | 3300017792 | Ga0163161_10006905 | Ga0163161_100069054 | 531 |
| 19 | 3300025940 | Ga0207691_10044861 | Ga0207691_100448612 | 531 |
| 20 | 3300026075 | Ga0207708_10035241 | Ga0207708_100352412 | 531 |
| 21 | 3300005327 | Ga0070658_10020123 | Ga0070658_100201233 | 532 |
| 22 | 3300005336 | Ga0070680_100048563 | Ga0070680_1000485632 | 532 |
| 23 | 3300005339 | Ga0070660_100040743 | Ga0070660_1000407432 | 532 |
| 24 | 3300005367 | Ga0070667_100089299 | Ga0070667_1000892992 | 532 |
| 25 | 3300005530 | Ga0070679_100004863 | Ga0070679_1000048633 | 532 |
| 26 | 3300025904 | Ga0207647_10004098 | Ga0207647_100040987 | 532 |
| 27 | 3300025917 | Ga0207660_10032623 | Ga0207660_100326232 | 532 |
| 28 | 3300025919 | Ga0207657_10036893 | Ga0207657_100368932 | 532 |
| 29 | 3300025921 | Ga0207652_10012647 | Ga0207652_100126473 | 532 |
| 30 | 3300037466 | Ga0395898_0023092 | Ga0395898_0023092_3733_5649 | 534 |
| 31 | 3300037471 | Ga0395905_0022256 | Ga0395905_0022256_250_2166 | 534 |
| 32 | 3300044706 | Ga0466964_0007886 | Ga0466964_0007886_1477_3609 | 537 |
| 33 | 3300045976 | Ga0466967_0004728 | Ga0466967_0004728_12_2144 | 537 |
| 34 | 3300049585 | Ga0501069_0011175 | Ga0501069_0011175_2083_4185 | 537 |
| 35 | 3300050491 | nmdc:mga00v17_27189_c1 | nmdc:mga00v17_27189_c1_525_2633 | 537 |
| 36 | 3300050496 | nmdc:mga07m45_19582_c1 | nmdc:mga07m45_19582_c1_102_2210 | 537 |
| 37 | 3300005937 | Ga0081455_10043219 | Ga0081455_100432192 | 538 |
| 38 | 3300044901 | Ga0466960_0000142 | Ga0466960_0000142_10526_12607 | 538 |
| 39 | 3300009094 | Ga0111539_10080251 | Ga0111539_100802513 | 542 |
| 40 | 3300048908 | Ga0496105_0035014 | Ga0496105_0035014_1830_3962 | 542 |
| 41 | 3300027907 | Ga0207428_10056705 | Ga0207428_100567052 | 543 |
| 42 | 3300048912 | Ga0496109_0086966 | Ga0496109_0086966_77_1987 | 543 |
| 43 | 3300048918 | Ga0496115_0039139 | Ga0496115_0039139_214_2346 | 543 |
| 44 | 3300003203 | JGI25406J46586_10013139 | JGI25406J46586_100131392 | 545 |
| 45 | 3300005985 | Ga0081539_10000607 | Ga0081539_1000060761 | 545 |
| 46 | 3300049583 | Ga0501067_0002742 | Ga0501067_0002742_3616_5682 | 545 |
| 47 | 3300049584 | Ga0501068_0008643 | Ga0501068_0008643_2030_4093 | 545 |
| 48 | 3300049586 | Ga0501070_0009931 | Ga0501070_0009931_4294_6360 | 545 |
| 49 | 3300049589 | Ga0501073_0005312 | Ga0501073_0005312_4653_6719 | 545 |
| 50 | 3300049590 | Ga0501074_0005443 | Ga0501074_0005443_3779_5845 | 545 |
| 51 | 3300049742 | Ga0501080_0030089 | Ga0501080_0030089_2177_4243 | 545 |
| 52 | 3300054114 | Ga0501084_0075751 | Ga0501084_0075751_615_2678 | 545 |
| 53 | 3300048903 | Ga0496100_0073441 | Ga0496100_0073441_62_2158 | 549 |
| 54 | 3300048912 | Ga0496109_0010389 | Ga0496109_0010389_5345_7441 | 549 |
| 55 | 3300053077 | Ga0495601_0012139 | Ga0495601_0012139_878_2881 | 549 |
| 56 | 3300006847 | Ga0075431_100001501 | Ga0075431_1000015013 | 550 |
| 57 | 3300048905 | Ga0496102_0031610 | Ga0496102_0031610_1395_3491 | 550 |
| 58 | 3300048909 | Ga0496106_0007402 | Ga0496106_0007402_4026_6122 | 550 |
| 59 | 3300050510 | nmdc:mga06r32_251_c1 | nmdc:mga06r32_251_c1_23895_25934 | 550 |
| 60 | 3300006038 | Ga0075365_10011065 | Ga0075365_100110653 | 553 |
| 61 | 3300041512 | Ga0451853_2151891 | Ga0451853_2151891_322_2361 | 554 |
| 62 | 3300049587 | Ga0501071_0012187 | Ga0501071_0012187_3620_5758 | 554 |
| 63 | 3300053096 | Ga0500641_0003227 | Ga0500641_0003227_3362_5479 | 554 |
| 64 | 3300006051 | Ga0075364_10036038 | Ga0075364_100360382 | 555 |
| 65 | 3300006178 | Ga0075367_10052386 | Ga0075367_100523862 | 555 |
| 66 | 3300050494 | nmdc:mga06z11_28623_c1 | nmdc:mga06z11_28623_c1_372_2489 | 555 |
| 67 | 3300031852 | Ga0307410_10020015 | Ga0307410_100200153 | 556 |
| 68 | 3300031903 | Ga0307407_10004578 | Ga0307407_100045783 | 556 |
| 69 | 3300031995 | Ga0307409_100012112 | Ga0307409_1000121123 | 556 |
| 70 | 3300031995 | Ga0307409_100020844 | Ga0307409_1000208442 | 556 |
| 71 | 3300032002 | Ga0307416_100012302 | Ga0307416_1000123023 | 556 |
| 72 | 3300032002 | Ga0307416_100102114 | Ga0307416_1001021142 | 556 |
| 73 | 3300044901 | Ga0466960_0013415 | Ga0466960_0013415_208_2346 | 556 |
| 74 | 3300005329 | Ga0070683_100003958 | Ga0070683_1000039588 | 557 |
| 75 | 3300005535 | Ga0070684_100069860 | Ga0070684_1000698602 | 557 |
| 76 | 3300025944 | Ga0207661_10006734 | Ga0207661_100067345 | 557 |
| 77 | 3300009094 | Ga0111539_10053172 | Ga0111539_100531723 | 560 |
| 78 | 3300050507 | nmdc:mga05p37_3158_c1 | nmdc:mga05p37_3158_c1_11990_13990 | 560 |
| 79 | 3300050508 | nmdc:mga09592_4125_c1 | nmdc:mga09592_4125_c1_4176_6176 | 560 |
| 80 | 3300050509 | nmdc:mga0qj67_28179_c1 | nmdc:mga0qj67_28179_c1_286_2286 | 560 |
| 81 | 3300050510 | nmdc:mga06r32_2321_c1 | nmdc:mga06r32_2321_c1_3129_5129 | 560 |
| 82 | 3300050511 | nmdc:mga08y16_7365_c1 | nmdc:mga08y16_7365_c1_7508_9508 | 560 |
| 83 | 3300005981 | Ga0081538_10023625 | Ga0081538_100236252 | 561 |
| 84 | 3300044694 | Ga0466963_0011605 | Ga0466963_0011605_614_2632 | 561 |
| 85 | iso_pu_bacteria | 2643221561 | 2643825142 | 561 |
| 86 | iso_pu_bacteria | 2643221696 | 2644534554 | 561 |
| 87 | 3300005985 | Ga0081539_10013918 | Ga0081539_100139183 | 562 |
| 88 | 3300005468 | Ga0070707_100036194 | Ga0070707_1000361943 | 564 |
| 89 | 3300005471 | Ga0070698_100001100 | Ga0070698_1000011008 | 564 |
| 90 | 3300025922 | Ga0207646_10046599 | Ga0207646_100465992 | 564 |
| 91 | 3300037312 | Ga0395899_0048829 | Ga0395899_0048829_684_2732 | 564 |
| 92 | 3300037466 | Ga0395898_0015662 | Ga0395898_0015662_2539_4587 | 564 |
| 93 | 3300038443 | Ga0395901_0012805 | Ga0395901_0012805_4155_6203 | 564 |
| 94 | iso_pu_bacteria | 2643221576 | 2643889544 | 564 |
| 95 | iso_pu_bacteria | 2643221590 | 2643958600 | 564 |
| 96 | 3300044765 | Ga0466970_0006291 | Ga0466970_0006291_955_2985 | 565 |
| 97 | 3300005937 | Ga0081455_10004693 | Ga0081455_100046939 | 566 |
| 98 | 3300006844 | Ga0075428_100008576 | Ga0075428_1000085763 | 566 |
| 99 | 3300006846 | Ga0075430_100023384 | Ga0075430_1000233843 | 566 |
| 100 | 3300006880 | Ga0075429_100000350 | Ga0075429_10000035029 | 566 |
| 101 | 3300026067 | Ga0207678_10109649 | Ga0207678_101096491 | 566 |
| 102 | 3300038443 | Ga0395901_0052648 | Ga0395901_0052648_598_2667 | 566 |
| 103 | 3300049568 | Ga0501031_0011051 | Ga0501031_0011051_2276_4279 | 567 |
| 104 | 3300049569 | Ga0501032_0012338 | Ga0501032_0012338_3112_5115 | 567 |
| 105 | 3300049572 | Ga0501036_0018773 | Ga0501036_0018773_2209_4212 | 567 |
| 106 | 3300049574 | Ga0501038_0017754 | Ga0501038_0017754_4165_6168 | 567 |
| 107 | 3300049575 | Ga0501039_0029483 | Ga0501039_0029483_1097_3100 | 567 |
| 108 | 3300049576 | Ga0501040_0016692 | Ga0501040_0016692_1236_3239 | 567 |
| 109 | 3300049577 | Ga0501041_0001057 | Ga0501041_0001057_4112_6115 | 567 |
| 110 | 3300049578 | Ga0501042_0032300 | Ga0501042_0032300_981_2984 | 567 |
| 111 | 3300049580 | Ga0501046_0023391 | Ga0501046_0023391_608_2611 | 567 |
| 112 | 3300049582 | Ga0501048_0006894 | Ga0501048_0006894_4801_6804 | 567 |
| 113 | 3300049587 | Ga0501071_0002330 | Ga0501071_0002330_988_2991 | 567 |
| 114 | 3300049588 | Ga0501072_0003167 | Ga0501072_0003167_9646_11649 | 567 |
| 115 | 3300049590 | Ga0501074_0004289 | Ga0501074_0004289_3291_5294 | 567 |
| 116 | 3300049591 | Ga0501075_0012788 | Ga0501075_0012788_358_2361 | 567 |
| 117 | 3300049593 | Ga0501077_0007458 | Ga0501077_0007458_1887_3890 | 567 |
| 118 | 3300049741 | Ga0501079_0014079 | Ga0501079_0014079_2291_4294 | 567 |
| 119 | 3300049743 | Ga0501081_0004122 | Ga0501081_0004122_7012_9015 | 567 |
| 120 | 3300054114 | Ga0501084_0005964 | Ga0501084_0005964_2237_4240 | 567 |
| 121 | 3300060353 | Ga0501082_0013204 | Ga0501082_0013204_3697_5700 | 567 |
| 122 | 3300061734 | Ga0530510_0021300 | Ga0530510_0021300_1933_3936 | 567 |
| 123 | 3300005564 | Ga0070664_100112441 | Ga0070664_1001124411 | 570 |
| 124 | 3300014325 | Ga0163163_10117405 | Ga0163163_101174052 | 571 |
| 125 | 3300041451 | Ga0451791_0598682 | Ga0451791_0598682_100_2184 | 572 |
| 126 | 3300006048 | Ga0075363_100009021 | Ga0075363_1000090212 | 573 |
| 127 | 3300006178 | Ga0075367_10003173 | Ga0075367_100031734 | 573 |
| 128 | 3300050494 | nmdc:mga06z11_6568_c1 | nmdc:mga06z11_6568_c1_1047_3164 | 573 |
| 129 | 3300048913 | Ga0496110_0041108 | Ga0496110_0041108_847_2988 | 574 |
| 130 | 3300006038 | Ga0075365_10029118 | Ga0075365_100291182 | 575 |
| 131 | 3300009093 | Ga0105240_10142878 | Ga0105240_101428782 | 575 |
| 132 | iso_pu_bacteria | 2946024296 | 2946026120 | 577 |
| 133 | iso_pu_bacteria | 2808606439 | 2809198309 | 580 |
| 134 | iso_pu_bacteria | 2643221615 | 2644092190 | 581 |
| 135 | iso_pu_bacteria | 2643221657 | 2644321993 | 581 |
| 136 | iso_pu_bacteria | 2811994878 | 2812349484 | 582 |
| 137 | 3300006038 | Ga0075365_10010777 | Ga0075365_100107773 | 583 |
| 138 | 3300005366 | Ga0070659_100020034 | Ga0070659_1000200342 | 584 |
| 139 | 3300005457 | Ga0070662_100017179 | Ga0070662_1000171792 | 584 |
| 140 | iso_pu_bacteria | 2919051321 | 2919054095 | 584 |
| 141 | 3300014326 | Ga0157380_10028672 | Ga0157380_100286722 | 585 |
| 142 | 3300044765 | Ga0466970_0005984 | Ga0466970_0005984_3966_5987 | 585 |
| 143 | 3300049590 | Ga0501074_0084894 | Ga0501074_0084894_74_2209 | 585 |
| 144 | 3300001990 | JGI24737J22298_10007593 | JGI24737J22298_100075932 | 586 |
| 145 | 3300005343 | Ga0070687_100015798 | Ga0070687_1000157982 | 586 |
| 146 | 3300005347 | Ga0070668_100011652 | Ga0070668_1000116523 | 586 |
| 147 | 3300005354 | Ga0070675_100062278 | Ga0070675_1000622782 | 586 |
| 148 | 3300005364 | Ga0070673_100018660 | Ga0070673_1000186603 | 586 |
| 149 | 3300005456 | Ga0070678_100038795 | Ga0070678_1000387952 | 586 |
| 150 | 3300005457 | Ga0070662_100018167 | Ga0070662_1000181675 | 586 |
| 151 | 3300005459 | Ga0068867_100053069 | Ga0068867_1000530692 | 586 |
| 152 | 3300005466 | Ga0070685_10006372 | Ga0070685_100063723 | 586 |
| 153 | 3300005535 | Ga0070684_100083926 | Ga0070684_1000839262 | 586 |
| 154 | 3300005544 | Ga0070686_100008001 | Ga0070686_1000080013 | 586 |
| 155 | 3300005563 | Ga0068855_100163341 | Ga0068855_1001633412 | 586 |
| 156 | 3300005578 | Ga0068854_100009399 | Ga0068854_1000093993 | 586 |
| 157 | 3300005842 | Ga0068858_100033677 | Ga0068858_1000336773 | 586 |
| 158 | 3300005843 | Ga0068860_100061939 | Ga0068860_1000619392 | 586 |
| 159 | 3300009098 | Ga0105245_10095246 | Ga0105245_100952462 | 586 |
| 160 | 3300009101 | Ga0105247_10010072 | Ga0105247_100100723 | 586 |
| 161 | 3300009176 | Ga0105242_10042221 | Ga0105242_100422212 | 586 |
| 162 | 3300009177 | Ga0105248_10058438 | Ga0105248_100584382 | 586 |
| 163 | 3300014969 | Ga0157376_10017438 | Ga0157376_100174384 | 586 |
| 164 | 3300025903 | Ga0207680_10007039 | Ga0207680_100070394 | 586 |
| 165 | 3300025908 | Ga0207643_10006693 | Ga0207643_100066932 | 586 |
| 166 | 3300025914 | Ga0207671_10017664 | Ga0207671_100176644 | 586 |
| 167 | 3300025919 | Ga0207657_10015512 | Ga0207657_100155125 | 586 |
| 168 | 3300025932 | Ga0207690_10019455 | Ga0207690_100194553 | 586 |
| 169 | 3300025933 | Ga0207706_10008146 | Ga0207706_100081464 | 586 |
| 170 | 3300025935 | Ga0207709_10031655 | Ga0207709_100316552 | 586 |
| 171 | 3300026041 | Ga0207639_10015204 | Ga0207639_100152042 | 586 |
| 172 | 3300026075 | Ga0207708_10011444 | Ga0207708_100114444 | 586 |
| 173 | 3300026089 | Ga0207648_10049720 | Ga0207648_100497202 | 586 |
| 174 | 3300026118 | Ga0207675_100010479 | Ga0207675_1000104798 | 586 |
| 175 | 3300028381 | Ga0268264_10050177 | Ga0268264_100501772 | 586 |
| 176 | 3300048907 | Ga0496104_0112157 | Ga0496104_0112157_251_2254 | 586 |
| 177 | 3300048910 | Ga0496107_0070239 | Ga0496107_0070239_423_2426 | 586 |
| 178 | 3300048911 | Ga0496108_0058489 | Ga0496108_0058489_234_2237 | 586 |
| 179 | 3300048912 | Ga0496109_0020401 | Ga0496109_0020401_1299_3302 | 586 |
| 180 | 3300048913 | Ga0496110_0013686 | Ga0496110_0013686_507_2510 | 586 |
| 181 | 3300048914 | Ga0496111_0048033 | Ga0496111_0048033_633_2636 | 586 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
PF00528
BPD_transp_1
Binding-protein-dependent transport system inner membrane component
174
338
0.94
PF00528
BPD_transp_1
Binding-protein-dependent transport system inner membrane component
529
703
0.94
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7ahc-assembly1.cif.gz_B | opua apo inward-facing | 0.8841 | 331 | 576 |
| 7ahh-assembly1.cif.gz_A | opua inhibited inward-facing, sbd docked | 0.8698 | 331 | 576 |
| 7ahh-assembly1.cif.gz_B | opua inhibited inward-facing, sbd docked | 0.8643 | 331 | 576 |
| 7ahd-assembly1.cif.gz_B | opua (e190q) occluded | 0.8373 | 331 | 583 |
| 7ahc-assembly1.cif.gz_B | opua apo inward-facing | 0.8002 | 331 | 576 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P14176_140_330_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.9323 | 127 | 313 | 1.10.3720.10 |
| af_O69722_23_210_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.9216 | 133 | 314 | 1.10.3720.10 |
| af_P14176_140_330_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.9089 | 127 | 313 | 1.10.3720.10 |
| af_Q2G088_14_207_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.9009 | 127 | 318 | 1.10.3720.10 |
| af_Q57856_64_258_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.9009 | 132 | 313 | 1.10.3720.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7G9GGI3-F1-model_v4 | ABC transporter permease | 0.9406 | 132 | 313 |
GO:0005886
GO:0031460 GO:0055085 |
| AF-C2UEV3-F1-model_v4 | deleted | 0.9399 | 133 | 309 |
|
| AF-A0A4S5BJV2-F1-model_v4 | Glycine betaine/L-proline ABC transporter permease ProW | 0.9386 | 331 | 578 |
GO:0005275
GO:0015226 GO:0015871 GO:0031460 GO:0043190 |
| AF-A0A1T1CR60-F1-model_v4 | ABC transmembrane type-1 domain-containing protein | 0.9368 | 332 | 579 |
GO:0005275
GO:0015226 GO:0015871 GO:0031460 GO:0043190 |
| AF-A0A329Q1I0-F1-model_v4 | deleted | 0.9366 | 164 | 313 |
|
Predicted Structure (AlphaFold2)
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