F276694

General Info

Members Datasets Scaffolds Average Seq Length
181 135 362 720

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10034767|Ga0070658_100347671
Length 744
Sequence MMPEHKQEMTADDVIRVNDQFYILSTSSMADDRTRVLKQGDTFAVFDRHGDMRPVGHGVQGLYHEGTRFLSRWELRLGNDRPMLLSSTVRDDNALLAVDLTNPDTNLKGDVVIQRGTLHISRMIFLWQGKAFEQMRVLNYGLAPVGLSLSLKFEADFADIFEVRGSTREHRGKRMMDTIVDGAILMTYEGLDDIVRCTRLECAPSPTRVVGSEVFFDLPLSSKGEATIYLTISCETPSSKARETAYQPALAAATRVLYEAKRQACHLFTSNEGFNDWLNRSFADIQMMNTETPEGPYPYAGVPWFSTPFGRDGLITALECLWTKPDMARGVLAYLASAQATEAIPEQDAEPGKILHEARRGEMAALREIPFGKYYGSVDSTPLFIMLAGAYYERTGDLPLIQSIWPQVQLGLEWIDKYGDIDGDGFVEYARHSPTGLVQQGWKDSADSVFYNDGVLADGPIALCEVQGYVFAAKRMAAQLALALGYPERAAELWRQADTLQRRFEAAFWSETLSSYVLALDGKKRPCEVRTSNAGHCLLTGIAGPERAWLTAQTLMREDLFTGWGVRTLGSSEVRFNPMSYHNGSVWPHDNALVAWGMARYGFKEPVHKILTGLFDASLFVDLHRLPELFCGFVRRTGEGPTLYPVACAPQAWAAGSVFLLLQACLGLSIHGADERIRFSGPTLPEFLQEVRIENLRVGRATLDLLLQRHPQDVSIRVLRMDGQIVIEKLGAGQIPTRSGHSKI

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
74 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
77 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
78 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
79 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
89 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
92 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
93 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
96 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
97 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
98 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
99 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
100 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
101 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
102 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
103 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
104 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
105 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
106 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
109 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
110 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
111 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
112 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
116 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
125 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
131 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
135 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.45
Metatranscriptomes 0.55
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.21
Rhizosphere 95.03
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10034767 3300005327 Bacteria 4056
2 rootH1_10067389 3300003316 Bacteria 6430
3 rootH2_10013769 3300003320 Bacteria 9777
4 Ga0065707_10107672 3300005295 Bacteria 2544
5 Ga0070658_10001878 3300005327 Bacteria 17711
6 Ga0070676_10023053 3300005328 Bacteria 3496
7 Ga0070666_10023027 3300005335 Bacteria 4050
8 Ga0070680_100001230 3300005336 Bacteria 18445
9 Ga0070680_100055177 3300005336 Bacteria 3246
10 Ga0070660_100003531 3300005339 Bacteria 10784
11 Ga0070687_100008271 3300005343 Bacteria 4397
12 Ga0070675_100009374 3300005354 Bacteria 7616
13 Ga0070671_100028650 3300005355 Bacteria 4587
14 Ga0070674_100000282 3300005356 Bacteria 24872
15 Ga0070673_100000027 3300005364 Bacteria 71407
16 Ga0070659_100009418 3300005366 Bacteria 7172
17 Ga0070709_10000660 3300005434 Bacteria 19660
18 Ga0070713_100000471 3300005436 Bacteria 25656
19 Ga0070713_100009581 3300005436 Bacteria 6946
20 Ga0070713_100043549 3300005436 Bacteria 3670
21 Ga0070711_100016955 3300005439 Bacteria 4632
22 Ga0070708_100043162 3300005445 Bacteria 3962
23 Ga0070678_100000642 3300005456 Bacteria 17105
24 Ga0070681_10033230 3300005458 Bacteria 5179
25 Ga0070679_100089825 3300005530 Bacteria 3059
26 Ga0070665_100000620 3300005548 Bacteria 48419
27 Ga0070665_100003949 3300005548 Bacteria 15647
28 Ga0070665_100017870 3300005548 Bacteria 7120
29 Ga0068856_100031882 3300005614 Bacteria 5157
30 Ga0068852_100023221 3300005616 Bacteria 4989
31 Ga0068863_100022420 3300005841 Bacteria 6031
32 Ga0081455_10001087 3300005937 Bacteria 34192
33 Ga0081538_10002560 3300005981 Bacteria 17672
34 Ga0081538_10004080 3300005981 Bacteria 13582
35 Ga0081540_1000022 3300005983 Bacteria 161205
36 Ga0070717_10016287 3300006028 Bacteria 5762
37 Ga0070717_10022607 3300006028 Bacteria 4971
38 Ga0070717_10055770 3300006028 Bacteria 3261
39 Ga0070716_100004845 3300006173 Bacteria 6469
40 Ga0070712_100000517 3300006175 Bacteria 22219
41 Ga0070712_100016234 3300006175 Bacteria 4808
42 Ga0068871_100000956 3300006358 Bacteria 19309
43 Ga0075428_100018602 3300006844 Bacteria 7678
44 Ga0075428_100051661 3300006844 Bacteria 4507
45 Ga0075430_100053533 3300006846 Bacteria 3398
46 Ga0075431_100129387 3300006847 Bacteria 2605
47 Ga0075433_10011391 3300006852 Bacteria 7161
48 Ga0075433_10023327 3300006852 Bacteria 5206
49 Ga0075433_10055422 3300006852 Bacteria 3461
50 Ga0075433_10064012 3300006852 Bacteria 3223
51 Ga0075434_100000780 3300006871 Bacteria 25221
52 Ga0075434_100053478 3300006871 Bacteria 4012
53 Ga0075429_100016705 3300006880 Bacteria 6357
54 Ga0075429_100028346 3300006880 Bacteria 4862
55 Ga0075436_100041166 3300006914 Bacteria 3187
56 Ga0075435_100000451 3300007076 Bacteria 25150
57 Ga0075435_100010956 3300007076 Bacteria 6646
58 Ga0075435_100014966 3300007076 Bacteria 5819
59 Ga0105240_10001071 3300009093 Bacteria 48359
60 Ga0114129_10000118 3300009147 Bacteria 79809
61 Ga0114129_10002752 3300009147 Bacteria 24500
62 Ga0105241_10003913 3300009174 Bacteria 11032
63 Ga0105237_10010693 3300009545 Bacteria 9742
64 Ga0105238_10008875 3300009551 Bacteria 10060
65 Ga0105239_10006350 3300010375 Bacteria 13742
66 Ga0157369_10033966 3300013105 Bacteria 5602
67 Ga0157378_10000235 3300013297 Bacteria 53980
68 Ga0157378_10003906 3300013297 Bacteria 13207
69 Ga0163162_10060224 3300013306 Bacteria 3831
70 Ga0157372_10028655 3300013307 Bacteria 6079
71 Ga0157375_10173464 3300013308 Bacteria 2305
72 Ga0157376_10004675 3300014969 Bacteria 9545
73 Ga0224712_10006224 3300022467 Bacteria 3385
74 Ga0207699_10001201 3300025906 Bacteria 12285
75 Ga0207645_10005356 3300025907 Bacteria 9324
76 Ga0207705_10010148 3300025909 Bacteria 6854
77 Ga0207684_10061572 3300025910 Bacteria 3187
78 Ga0207695_10003178 3300025913 Bacteria 23405
79 Ga0207671_10004114 3300025914 Bacteria 14066
80 Ga0207693_10000192 3300025915 Bacteria 55694
81 Ga0207693_10061247 3300025915 Bacteria 2948
82 Ga0207662_10014620 3300025918 Bacteria 4407
83 Ga0207657_10007315 3300025919 Bacteria 11323
84 Ga0207646_10017951 3300025922 Bacteria 6607
85 Ga0207694_10074888 3300025924 Bacteria 2649
86 Ga0207650_10013203 3300025925 Bacteria 5717
87 Ga0207700_10001006 3300025928 Bacteria 16275
88 Ga0207700_10013725 3300025928 Bacteria 5284
89 Ga0207700_10040904 3300025928 Bacteria 3387
90 Ga0207706_10020288 3300025933 Bacteria 5973
91 Ga0207665_10003944 3300025939 Bacteria 9932
92 Ga0207651_10000073 3300025960 Bacteria 45927
93 Ga0207683_10000596 3300026121 Bacteria 33293
94 Ga0207683_10071869 3300026121 Bacteria 3059
95 Ga0268266_10000820 3300028379 Bacteria 40665
96 Ga0268266_10003546 3300028379 Bacteria 15490
97 Ga0265339_10022407 3300031249 Bacteria 3661
98 Ga0265313_10000259 3300031595 Bacteria 57603
99 Ga0265342_10000418 3300031712 Bacteria 46654
100 Ga0307409_100012284 3300031995 Bacteria 5451
101 Ga0307409_100041394 3300031995 Bacteria 3440
102 Ga0373934_0002851 3300035086 Bacteria 6325
103 Ga0373953_0018132 3300035117 Bacteria 2600
104 Ga0373946_0018741 3300035171 Bacteria 2660
105 Ga0373935_0016509 3300035692 Bacteria 4467
106 Ga0373937_0003065 3300036401 Bacteria 13974
107 Ga0373925_0057127 3300037068 Bacteria 2924
108 Ga0395899_0000661 3300037312 Bacteria 35137
109 Ga0395899_0009184 3300037312 Bacteria 7591
110 Ga0395900_0000920 3300037418 Bacteria 38685
111 Ga0395900_0046361 3300037418 Bacteria 4475
112 Ga0395898_0001348 3300037466 Bacteria 35440
113 Ga0395905_0006794 3300037471 Bacteria 11466
114 Ga0395905_0068846 3300037471 Bacteria 3315
115 Ga0395901_0000452 3300038443 Bacteria 47714
116 Ga0395901_0114341 3300038443 Bacteria 2835
117 Ga0436365_1826534 3300039437 Bacteria 10856
118 Ga0436363_0025945 3300039450 Bacteria 6303
119 Ga0436363_1143832 3300039450 Bacteria 7269
120 Ga0466972_0000283 3300044658 Bacteria 31634
121 Ga0466972_0018924 3300044658 Bacteria 3441
122 Ga0466965_0001710 3300044683 Bacteria 9017
123 Ga0466968_0020513 3300044735 Bacteria 2668
124 Ga0495592_0014583 3300046454 Bacteria 5965
125 Ga0495629_0026423 3300046459 Bacteria 4123
126 Ga0495651_0009349 3300046462 Bacteria 7523
127 Ga0495653_0010361 3300046463 Bacteria 7625
128 Ga0495580_0001992 3300046472 Bacteria 17965
129 Ga0495580_0002325 3300046472 Bacteria 16584
130 Ga0495580_0024585 3300046472 Bacteria 4407
131 Ga0495582_0000097 3300046473 Bacteria 44684
132 Ga0495582_0042815 3300046473 Bacteria 2493
133 Ga0495664_0012144 3300046477 Bacteria 4872
134 Ga0495664_0057531 3300046477 Bacteria 2313
135 Ga0495608_0005513 3300046511 Bacteria 9036
136 Ga0495608_0039332 3300046511 Bacteria 3170
137 Ga0495630_0040264 3300046517 Bacteria 3492
138 Ga0495666_0019321 3300046526 Bacteria 3383
139 Ga0495642_0012597 3300046528 Bacteria 3260
140 Ga0495652_0027402 3300046529 Bacteria 5021
141 Ga0495640_0006348 3300046533 Bacteria 9368
142 Ga0495640_0021891 3300046533 Bacteria 4682
143 Ga0495587_0001306 3300046536 Bacteria 16558
144 Ga0495645_0000777 3300046543 Bacteria 21875
145 Ga0495635_0107477 3300046663 Bacteria 1906
146 Ga0495661_0005684 3300046665 Bacteria 8829
147 Ga0495599_0012603 3300046678 Bacteria 5212
148 Ga0495623_0015551 3300046679 Bacteria 4920
149 Ga0495624_0018895 3300046690 Bacteria 4605
150 Ga0495604_0004853 3300047317 Bacteria 10653
151 Ga0495674_0024987 3300047319 Bacteria 5483
152 Ga0495674_0074410 3300047319 Bacteria 2925
153 Ga0495674_0075055 3300047319 Bacteria 2910
154 Ga0495676_0030884 3300047321 Bacteria 4538
155 Ga0495687_016076 3300047443 Bacteria 3775
156 Ga0495675_0010111 3300047444 Bacteria 5886
157 Ga0495684_0025370 3300047471 Bacteria 4556
158 Ga0495684_0029715 3300047471 Bacteria 4194
159 Ga0495684_0038832 3300047471 Bacteria 3649
160 Ga0496101_0040527 3300048904 Bacteria 3317
161 Ga0496109_0015043 3300048912 Bacteria 6734
162 Ga0496114_0001780 3300048917 Bacteria 16341
163 Ga0496115_0029675 3300048918 Bacteria 4297
164 Ga0501034_0004124 3300049571 Bacteria 16281
165 Ga0501034_0055213 3300049571 Bacteria 3997
166 Ga0501072_0018585 3300049588 Bacteria 5357
167 Ga0501075_0047898 3300049591 Bacteria 3212
168 Ga0501075_0060202 3300049591 Bacteria 2861
169 Ga0501081_0073598 3300049743 Bacteria 2383
170 nmdc:mga05p37_30_c1 3300050507 Bacteria 114300
171 nmdc:mga09592_31962_c1 3300050508 Bacteria 3939
172 nmdc:mga0qj67_46084_c1 3300050509 Bacteria 3441
173 nmdc:mga06r32_79451_c1 3300050510 Bacteria 3191
174 nmdc:mga0n895_43942_c1 3300050512 Bacteria 4357
175 nmdc:mga0rr50_24047_c1 3300050513 Bacteria 4214
176 nmdc:mga0a205_1023_c1 3300050515 Bacteria 23245
177 nmdc:mga0a205_115153_c1 3300050515 Bacteria 2587
178 nmdc:mga0a205_61750_c1 3300050515 Bacteria 3620
179 Ga0495619_0049958 3300053085 Bacteria 2759
180 Ga0501084_0096581 3300054114 Bacteria 2481
181 Ga0530510_0018279 3300061734 Bacteria 4970
182 Ga0070658_10034767
183 rootH1_10067389
184 rootH2_10013769
185 Ga0065707_10107672
186 Ga0070658_10001878
187 Ga0070676_10023053
188 Ga0070666_10023027
189 Ga0070680_100001230
190 Ga0070680_100055177
191 Ga0070660_100003531
192 Ga0070687_100008271
193 Ga0070675_100009374
194 Ga0070671_100028650
195 Ga0070674_100000282
196 Ga0070673_100000027
197 Ga0070659_100009418
198 Ga0070709_10000660
199 Ga0070713_100000471
200 Ga0070713_100009581
201 Ga0070713_100043549
202 Ga0070711_100016955
203 Ga0070708_100043162
204 Ga0070678_100000642
205 Ga0070681_10033230
206 Ga0070679_100089825
207 Ga0070665_100000620
208 Ga0070665_100003949
209 Ga0070665_100017870
210 Ga0068856_100031882
211 Ga0068852_100023221
212 Ga0068863_100022420
213 Ga0081455_10001087
214 Ga0081538_10002560
215 Ga0081538_10004080
216 Ga0081540_1000022
217 Ga0070717_10016287
218 Ga0070717_10022607
219 Ga0070717_10055770
220 Ga0070716_100004845
221 Ga0070712_100000517
222 Ga0070712_100016234
223 Ga0068871_100000956
224 Ga0075428_100018602
225 Ga0075428_100051661
226 Ga0075430_100053533
227 Ga0075431_100129387
228 Ga0075433_10011391
229 Ga0075433_10023327
230 Ga0075433_10055422
231 Ga0075433_10064012
232 Ga0075434_100000780
233 Ga0075434_100053478
234 Ga0075429_100016705
235 Ga0075429_100028346
236 Ga0075436_100041166
237 Ga0075435_100000451
238 Ga0075435_100010956
239 Ga0075435_100014966
240 Ga0105240_10001071
241 Ga0114129_10000118
242 Ga0114129_10002752
243 Ga0105241_10003913
244 Ga0105237_10010693
245 Ga0105238_10008875
246 Ga0105239_10006350
247 Ga0157369_10033966
248 Ga0157378_10000235
249 Ga0157378_10003906
250 Ga0163162_10060224
251 Ga0157372_10028655
252 Ga0157375_10173464
253 Ga0157376_10004675
254 Ga0224712_10006224
255 Ga0207699_10001201
256 Ga0207645_10005356
257 Ga0207705_10010148
258 Ga0207684_10061572
259 Ga0207695_10003178
260 Ga0207671_10004114
261 Ga0207693_10000192
262 Ga0207693_10061247
263 Ga0207662_10014620
264 Ga0207657_10007315
265 Ga0207646_10017951
266 Ga0207694_10074888
267 Ga0207650_10013203
268 Ga0207700_10001006
269 Ga0207700_10013725
270 Ga0207700_10040904
271 Ga0207706_10020288
272 Ga0207665_10003944
273 Ga0207651_10000073
274 Ga0207683_10000596
275 Ga0207683_10071869
276 Ga0268266_10000820
277 Ga0268266_10003546
278 Ga0265339_10022407
279 Ga0265313_10000259
280 Ga0265342_10000418
281 Ga0307409_100012284
282 Ga0307409_100041394
283 Ga0373934_0002851
284 Ga0373953_0018132
285 Ga0373946_0018741
286 Ga0373935_0016509
287 Ga0373937_0003065
288 Ga0373925_0057127
289 Ga0395899_0000661
290 Ga0395899_0009184
291 Ga0395900_0000920
292 Ga0395900_0046361
293 Ga0395898_0001348
294 Ga0395905_0006794
295 Ga0395905_0068846
296 Ga0395901_0000452
297 Ga0395901_0114341
298 Ga0436365_1826534
299 Ga0436363_0025945
300 Ga0436363_1143832
301 Ga0466972_0000283
302 Ga0466972_0018924
303 Ga0466965_0001710
304 Ga0466968_0020513
305 Ga0495592_0014583
306 Ga0495629_0026423
307 Ga0495651_0009349
308 Ga0495653_0010361
309 Ga0495580_0001992
310 Ga0495580_0002325
311 Ga0495580_0024585
312 Ga0495582_0000097
313 Ga0495582_0042815
314 Ga0495664_0012144
315 Ga0495664_0057531
316 Ga0495608_0005513
317 Ga0495608_0039332
318 Ga0495630_0040264
319 Ga0495666_0019321
320 Ga0495642_0012597
321 Ga0495652_0027402
322 Ga0495640_0006348
323 Ga0495640_0021891
324 Ga0495587_0001306
325 Ga0495645_0000777
326 Ga0495635_0107477
327 Ga0495661_0005684
328 Ga0495599_0012603
329 Ga0495623_0015551
330 Ga0495624_0018895
331 Ga0495604_0004853
332 Ga0495674_0024987
333 Ga0495674_0074410
334 Ga0495674_0075055
335 Ga0495676_0030884
336 Ga0495687_016076
337 Ga0495675_0010111
338 Ga0495684_0025370
339 Ga0495684_0029715
340 Ga0495684_0038832
341 Ga0496101_0040527
342 Ga0496109_0015043
343 Ga0496114_0001780
344 Ga0496115_0029675
345 Ga0501034_0004124
346 Ga0501034_0055213
347 Ga0501072_0018585
348 Ga0501075_0047898
349 Ga0501075_0060202
350 Ga0501081_0073598
351 nmdc:mga05p37_30_c1
352 nmdc:mga09592_31962_c1
353 nmdc:mga0qj67_46084_c1
354 nmdc:mga06r32_79451_c1
355 nmdc:mga0n895_43942_c1
356 nmdc:mga0rr50_24047_c1
357 nmdc:mga0a205_1023_c1
358 nmdc:mga0a205_115153_c1
359 nmdc:mga0a205_61750_c1
360 Ga0495619_0049958
361 Ga0501084_0096581
362 Ga0530510_0018279

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14742

GDE_N_bis

N-terminal domain of (some) glycogen debranching enzymes

37

231

0.98

PF22422

MGH1-like_GH

Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain

311

625

0.85

PF06202

GDE_C

Amylo-alpha-1,6-glucosidase

282

660

0.63

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vma-assembly1.cif.gz_A the x-ray crystallographic structure of amylo-alpha-1,6-glucosidase from thermococcus gammatolerans stb12 0.9096 24 709
7vma-assembly1.cif.gz_A the x-ray crystallographic structure of amylo-alpha-1,6-glucosidase from thermococcus gammatolerans stb12 0.9025 24 709
4wvc-assembly1.cif.gz_A crystal structure of gh63 mannosylglycerate hydrolase from thermus thermophilus hb8 in complex with tris and d-glycerate 0.7224 264 651
4wvb-assembly1.cif.gz_A crystal structure of gh63 mannosylglycerate hydrolase from thermus thermophilus hb8 in complex with glucose 0.7219 288 651
4wva-assembly1.cif.gz_A crystal structure of gh63 mannosylglycerate hydrolase from thermus thermophilus hb8 in complex with tris 0.7187 282 651
ID Description Score Start End Superfamily
af_I1MXH7_646_707_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9485 462 494 1.25.40.10
af_I1MMJ3_632_690_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9467 462 494 1.25.40.10
2okxB05 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8026 262 652 1.50.10.10
2okxB05 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.7916 262 652 1.50.10.10
af_Q59005_266_613_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.7787 267 651 1.50.10.10
ID Description Score Start End GO Terms
AF-A0A7C4JQN3-F1-model_v4 Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain-containing protein 0.9863 279 622 GO:0005975
AF-A0A450Y5L9-F1-model_v4 Alpha-L-rhamnosidase 0.9846 324 535 GO:0005975
AF-A0A7C6A0G2-F1-model_v4 Amylo-alpha-1,6-glucosidase 0.9844 264 655 GO:0005975
AF-A0A497JE22-F1-model_v4 Amylo-alpha-1,6-glucosidase 0.9842 24 720 GO:0005975
AF-A0A1V9G6C0-F1-model_v4 Amylo-alpha-1,6-glucosidase 0.9821 4 721 GO:0005975

Map