F276177

General Info

Members Datasets Scaffolds Average Seq Length
180 123 360 225

Family's Representative Sequence

Representative Sequence 3300046543|Ga0495645_0062751|Ga0495645_0062751_755_1486
Length 243
Sequence MTVDTETSTEPDMSTTTPAPITIDVWSDIACPWCYIGKRNLETGLAAASDDADAPQVEIVYHSFELSPDTPVDFVGGEADYLAQHKGISAAQAHQMLERVTGVAADAGLQYRFDILQHTNTVKAHELLHYAKAQGRQLEVAERLMSAYFLEGRHVGRIDDLVELAGESGLDADAAREALESARYLSAVRDDQTQAAAYGINGVPFFVIDGKYGVSGAQPAEAFTQVARQVWAEHREESAAAVA

Samples

Sample ID Description Type Environment
1 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
4 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
13 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
14 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
15 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
16 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
17 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
18 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
19 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
20 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
21 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
22 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
23 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
24 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
32 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
33 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
34 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
35 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
36 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
37 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
38 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
39 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
40 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
41 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
42 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
43 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
44 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
45 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
46 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
47 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
48 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
49 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
50 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
51 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
52 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
53 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
54 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
55 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
56 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
57 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
58 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
59 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
60 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
61 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
62 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
63 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
64 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
65 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
66 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
67 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
77 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
78 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
79 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
80 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
81 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
82 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
84 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
85 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
86 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
87 2643221546 Microbacterium sp. Root53 Isolate Unclassified
88 2643221566 Microbacterium sp. Root166 Isolate Unclassified
89 2643221575 Microbacterium sp. Root61 Isolate Unclassified
90 2643221597 Microbacterium sp. Root180 Isolate Unclassified
91 2643221630 Microbacterium sp. Root322 Isolate Unclassified
92 2643221649 Leifsonia sp. Root4 Isolate Unclassified
93 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
94 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
95 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
96 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
97 2773857759 Microbacterium sp. 1294 Isolate Unclassified
98 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
99 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
100 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
101 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
102 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
103 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
104 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
105 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
106 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
107 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
108 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
109 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
110 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
111 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
112 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
113 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
114 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
115 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
116 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
117 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
118 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
119 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
120 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
121 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
122 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
123 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.89
Metatranscriptomes 0.56
Isolates 20.56

Biome Distribution

Category Percentage (%)
Aerial Root 0.56
Bulb 0
Endosphere 8.33
Nodule 0
Rhizoplane 12.78
Rhizosphere 42.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495645_0062751 3300046543 Bacteria 2691
2 JGI24740J21852_10009479 3300001979 Bacteria 3808
3 Ga0055527_1000001 3300003760 Bacteria 850044
4 Ga0055529_1000018 3300003763 Bacteria 344344
5 Ga0065714_10163662 3300005288 Bacteria 1039
6 Ga0070660_100060656 3300005339 Bacteria 2936
7 Ga0070661_100199406 3300005344 Bacteria 1529
8 Ga0070659_100437157 3300005366 Bacteria 1108
9 Ga0068855_100872841 3300005563 Bacteria 952
10 Ga0070664_100083682 3300005564 Bacteria 2753
11 Ga0075364_10005297 3300006051 Bacteria 7487
12 Ga0075364_10010120 3300006051 Bacteria 5688
13 Ga0075364_10035151 3300006051 Bacteria 3238
14 Ga0075364_10104115 3300006051 Bacteria 1890
15 Ga0105244_10182807 3300009036 Bacteria 994
16 Ga0105248_10271233 3300009177 Bacteria 1911
17 Ga0105030_103984 3300009987 Bacteria 1265
18 Ga0105028_106874 3300009993 Bacteria 1188
19 Ga0105239_10583767 3300010375 Bacteria 1274
20 Ga0157371_10054635 3300013102 Bacteria 2835
21 Ga0157370_10428825 3300013104 Bacteria 1216
22 Ga0157370_10514996 3300013104 Bacteria 1098
23 Ga0157372_10124265 3300013307 Bacteria 2966
24 Ga0157372_10919313 3300013307 Bacteria 1015
25 Ga0209672_100006 3300025228 Bacteria 1004497
26 Ga0209147_100868 3300025229 Bacteria 14017
27 Ga0209258_103255 3300025242 Bacteria 3603
28 Ga0209148_1000015 3300025254 Bacteria 850103
29 Ga0209455_1000013 3300025272 Bacteria 850103
30 Ga0209455_1000979 3300025272 Bacteria 14449
31 Ga0207657_10088806 3300025919 Bacteria 2583
32 Ga0207649_10223306 3300025920 Bacteria 1343
33 Ga0207690_10389039 3300025932 Bacteria 1110
34 Ga0207669_10804744 3300025937 Bacteria 780
35 Ga0207711_11188779 3300025941 Bacteria 704
36 Ga0207676_11149631 3300026095 Bacteria 768
37 Ga0307405_10244634 3300031731 Bacteria 1331
38 Ga0307406_10000123 3300031901 Bacteria 45640
39 Ga0307406_10017923 3300031901 Bacteria 4131
40 Ga0307406_10371128 3300031901 Bacteria 1125
41 Ga0307414_10204985 3300032004 Bacteria 1607
42 Ga0395899_0542192 3300037312 Bacteria 749
43 Ga0395901_0532629 3300038443 Bacteria 1192
44 Ga0451791_1216024 3300041451 Bacteria 2115
45 Ga0451804_0410851 3300041463 Bacteria 1067
46 Ga0451853_1397627 3300041512 Bacteria 1900
47 Ga0466970_0000885 3300044765 Bacteria 14433
48 Ga0466970_0062141 3300044765 Bacteria 2002
49 Ga0466960_0224312 3300044901 Bacteria 1035
50 Ga0466958_0060122 3300045836 Bacteria 2313
51 Ga0466958_0136793 3300045836 Bacteria 1541
52 Ga0495627_003056 3300046453 Bacteria 7624
53 Ga0496100_0028006 3300048903 Bacteria 3471
54 Ga0496100_0194465 3300048903 Bacteria 1474
55 Ga0496101_0064501 3300048904 Bacteria 2668
56 Ga0496101_0367883 3300048904 Bacteria 1130
57 Ga0496102_0086857 3300048905 Bacteria 2889
58 Ga0496103_0009392 3300048906 Bacteria 5794
59 Ga0496103_0143687 3300048906 Bacteria 1527
60 Ga0496104_0079996 3300048907 Bacteria 3115
61 Ga0496104_0734317 3300048907 Bacteria 895
62 Ga0496105_0047086 3300048908 Bacteria 3558
63 Ga0496107_0472777 3300048910 Bacteria 930
64 Ga0496109_0116707 3300048912 Bacteria 2484
65 Ga0496110_0045886 3300048913 Bacteria 3821
66 Ga0496111_0009469 3300048914 Bacteria 6505
67 Ga0496112_0023102 3300048915 Bacteria 5936
68 Ga0496113_0047956 3300048916 Bacteria 3176
69 Ga0496114_0026856 3300048917 Bacteria 4716
70 Ga0496114_0072546 3300048917 Bacteria 2896
71 Ga0496114_0635067 3300048917 Bacteria 940
72 Ga0496115_0032163 3300048918 Bacteria 4138
73 Ga0496115_0225571 3300048918 Bacteria 1545
74 Ga0496116_0036708 3300048919 Bacteria 3425
75 Ga0496117_0000053 3300048920 Bacteria 279396
76 Ga0496117_0001321 3300048920 Bacteria 36462
77 Ga0496117_0010509 3300048920 Bacteria 8419
78 Ga0496118_0004020 3300048921 Bacteria 17887
79 Ga0496118_0009005 3300048921 Bacteria 10183
80 Ga0496118_0125287 3300048921 Bacteria 1664
81 Ga0496118_0175197 3300048921 Bacteria 1304
82 Ga0496119_0001919 3300048922 Bacteria 23793
83 Ga0496119_0006925 3300048922 Bacteria 10339
84 Ga0496119_0007470 3300048922 Bacteria 9832
85 Ga0496119_0014544 3300048922 Bacteria 6143
86 Ga0496119_0029252 3300048922 Bacteria 3742
87 Ga0496120_0000567 3300048923 Bacteria 56364
88 Ga0496120_0001497 3300048923 Bacteria 27661
89 Ga0496120_0005583 3300048923 Bacteria 9984
90 Ga0496120_0108444 3300048923 Bacteria 1454
91 Ga0496120_0190089 3300048923 Bacteria 1002
92 Ga0496122_0000030 3300048925 Bacteria 331586
93 Ga0496122_0000200 3300048925 Bacteria 133548
94 Ga0496122_0006392 3300048925 Bacteria 13543
95 Ga0496122_0007477 3300048925 Bacteria 12125
96 Ga0496122_0053246 3300048925 Bacteria 3053
97 Ga0496122_0309849 3300048925 Bacteria 846
98 Ga0496123_0000024 3300048926 Bacteria 331587
99 Ga0496123_0000076 3300048926 Bacteria 194050
100 Ga0496123_0008576 3300048926 Bacteria 9368
101 Ga0496124_0005229 3300048927 Bacteria 14720
102 Ga0496124_0018523 3300048927 Bacteria 6518
103 Ga0496125_0000061 3300048928 Bacteria 262739
104 Ga0496125_0003878 3300048928 Bacteria 17678
105 Ga0496125_0010555 3300048928 Bacteria 9337
106 Ga0496125_0013003 3300048928 Bacteria 8215
107 Ga0496125_0029220 3300048928 Bacteria 4958
108 Ga0496125_0030048 3300048928 Bacteria 4867
109 Ga0496125_0071580 3300048928 Bacteria 2707
110 Ga0496125_0088626 3300048928 Bacteria 2331
111 Ga0496126_0006116 3300048929 Bacteria 13498
112 Ga0496126_0022032 3300048929 Bacteria 6208
113 Ga0496126_0033121 3300048929 Bacteria 4863
114 Ga0496126_0107727 3300048929 Bacteria 2430
115 Ga0496126_0123465 3300048929 Bacteria 2243
116 Ga0496126_0458624 3300048929 Bacteria 1025
117 Ga0501031_0336577 3300049568 Bacteria 977
118 Ga0501032_0080243 3300049569 Bacteria 2171
119 Ga0501032_0140154 3300049569 Bacteria 1593
120 Ga0501033_0015202 3300049570 Bacteria 5842
121 Ga0501034_0001058 3300049571 Bacteria 39041
122 Ga0501034_0026658 3300049571 Bacteria 5881
123 Ga0501034_0037614 3300049571 Bacteria 4901
124 Ga0501037_0287628 3300049573 Bacteria 1144
125 Ga0501038_0255926 3300049574 Bacteria 1385
126 Ga0501039_0045694 3300049575 Bacteria 3384
127 Ga0501041_0147021 3300049577 Bacteria 1471
128 Ga0501041_0329620 3300049577 Bacteria 963
129 Ga0501047_0192343 3300049581 Bacteria 1903
130 Ga0501071_0004747 3300049587 Bacteria 8650
131 Ga0501072_0286651 3300049588 Bacteria 1309
132 Ga0501073_0214001 3300049589 Bacteria 1332
133 Ga0501079_0098167 3300049741 Bacteria 2271
134 Ga0501081_0091459 3300049743 Bacteria 2140
135 Ga0501083_0000052 3300049744 Bacteria 84349
136 Ga0501083_0326440 3300049744 Bacteria 998
137 Ga0501035_0064364 3300049822 Bacteria 3259
138 Ga0501045_0010579 3300049824 Bacteria 6463
139 Ga0501045_0241098 3300049824 Bacteria 1346
140 nmdc:mga00v17_2374_c1 3300050491 Bacteria 9640
141 nmdc:mga00v17_3069_c1 3300050491 Bacteria 8589
142 nmdc:mga07m45_214937_c1 3300050496 Bacteria 1118
143 Ga0587111_0022153 3300060346 Bacteria 1232
144 2643752303 2643221546 Bacteria 2910897
145 2643848268 2643221566 Bacteria 3460379
146 2643885401 2643221575 Bacteria 4022601
147 2643995709 2643221597 Bacteria 3347721
148 2644170079 2643221630 Bacteria 3601215
149 2644279326 2643221649 Bacteria 3867359
150 2644680416 2643221724 Bacteria 3593515
151 2730229870 2728369380 Bacteria 3620317
152 2747953448 2747842429 Bacteria 3914386
153 2758226100 2757320536 Bacteria 3629334
154 2774384542 2773857759 Bacteria 2963774
155 2808885664 2808606368 Bacteria 3174172
156 2809227460 2808606447 Bacteria 3572005
157 2812323135 2811994872 Bacteria 4121241
158 2852634221 2852632344 Bacteria 3463163
159 2852647491 2852646457 Bacteria 3408613
160 2852665422 2852663356 Bacteria 4090475
161 2857721629 2857720070 Bacteria 3189373
162 2857724044 2857723135 Bacteria 4217853
163 2904766815 2904765812 Bacteria 5369154
164 2904775174 2904770941 Bacteria 5580202
165 2908814504 2908811453 Bacteria 5478616
166 2919420750 2919420072 Bacteria 5390363
167 2919433492 2919432681 Bacteria 5390474
168 2928092276 2928090899 Bacteria 3158267
169 2939661305 2939660829 Bacteria 3784848
170 2945972008 2945968032 Bacteria 4111363
171 2946033613 2946033335 Bacteria 3835514
172 2946044418 2946041624 Bacteria 4191385
173 2946080770 2946080515 Bacteria 4310960
174 2974297214 2974294766 Bacteria 3767688
175 2974326553 2974324384 Bacteria 3750535
176 2977253868 2977251589 Bacteria 2952848
177 2977266656 2977264416 Bacteria 3750737
178 2984580948 2984580707 Bacteria 3351387
179 8004185010 8004182704 Bacteria 3391155
180 8016257521 8016254467 Bacteria 3797036
181 Ga0495645_0062751
182 JGI24740J21852_10009479
183 Ga0055527_1000001
184 Ga0055529_1000018
185 Ga0065714_10163662
186 Ga0070660_100060656
187 Ga0070661_100199406
188 Ga0070659_100437157
189 Ga0068855_100872841
190 Ga0070664_100083682
191 Ga0075364_10005297
192 Ga0075364_10010120
193 Ga0075364_10035151
194 Ga0075364_10104115
195 Ga0105244_10182807
196 Ga0105248_10271233
197 Ga0105030_103984
198 Ga0105028_106874
199 Ga0105239_10583767
200 Ga0157371_10054635
201 Ga0157370_10428825
202 Ga0157370_10514996
203 Ga0157372_10124265
204 Ga0157372_10919313
205 Ga0209672_100006
206 Ga0209147_100868
207 Ga0209258_103255
208 Ga0209148_1000015
209 Ga0209455_1000013
210 Ga0209455_1000979
211 Ga0207657_10088806
212 Ga0207649_10223306
213 Ga0207690_10389039
214 Ga0207669_10804744
215 Ga0207711_11188779
216 Ga0207676_11149631
217 Ga0307405_10244634
218 Ga0307406_10000123
219 Ga0307406_10017923
220 Ga0307406_10371128
221 Ga0307414_10204985
222 Ga0395899_0542192
223 Ga0395901_0532629
224 Ga0451791_1216024
225 Ga0451804_0410851
226 Ga0451853_1397627
227 Ga0466970_0000885
228 Ga0466970_0062141
229 Ga0466960_0224312
230 Ga0466958_0060122
231 Ga0466958_0136793
232 Ga0495627_003056
233 Ga0496100_0028006
234 Ga0496100_0194465
235 Ga0496101_0064501
236 Ga0496101_0367883
237 Ga0496102_0086857
238 Ga0496103_0009392
239 Ga0496103_0143687
240 Ga0496104_0079996
241 Ga0496104_0734317
242 Ga0496105_0047086
243 Ga0496107_0472777
244 Ga0496109_0116707
245 Ga0496110_0045886
246 Ga0496111_0009469
247 Ga0496112_0023102
248 Ga0496113_0047956
249 Ga0496114_0026856
250 Ga0496114_0072546
251 Ga0496114_0635067
252 Ga0496115_0032163
253 Ga0496115_0225571
254 Ga0496116_0036708
255 Ga0496117_0000053
256 Ga0496117_0001321
257 Ga0496117_0010509
258 Ga0496118_0004020
259 Ga0496118_0009005
260 Ga0496118_0125287
261 Ga0496118_0175197
262 Ga0496119_0001919
263 Ga0496119_0006925
264 Ga0496119_0007470
265 Ga0496119_0014544
266 Ga0496119_0029252
267 Ga0496120_0000567
268 Ga0496120_0001497
269 Ga0496120_0005583
270 Ga0496120_0108444
271 Ga0496120_0190089
272 Ga0496122_0000030
273 Ga0496122_0000200
274 Ga0496122_0006392
275 Ga0496122_0007477
276 Ga0496122_0053246
277 Ga0496122_0309849
278 Ga0496123_0000024
279 Ga0496123_0000076
280 Ga0496123_0008576
281 Ga0496124_0005229
282 Ga0496124_0018523
283 Ga0496125_0000061
284 Ga0496125_0003878
285 Ga0496125_0010555
286 Ga0496125_0013003
287 Ga0496125_0029220
288 Ga0496125_0030048
289 Ga0496125_0071580
290 Ga0496125_0088626
291 Ga0496126_0006116
292 Ga0496126_0022032
293 Ga0496126_0033121
294 Ga0496126_0107727
295 Ga0496126_0123465
296 Ga0496126_0458624
297 Ga0501031_0336577
298 Ga0501032_0080243
299 Ga0501032_0140154
300 Ga0501033_0015202
301 Ga0501034_0001058
302 Ga0501034_0026658
303 Ga0501034_0037614
304 Ga0501037_0287628
305 Ga0501038_0255926
306 Ga0501039_0045694
307 Ga0501041_0147021
308 Ga0501041_0329620
309 Ga0501047_0192343
310 Ga0501071_0004747
311 Ga0501072_0286651
312 Ga0501073_0214001
313 Ga0501079_0098167
314 Ga0501081_0091459
315 Ga0501083_0000052
316 Ga0501083_0326440
317 Ga0501035_0064364
318 Ga0501045_0010579
319 Ga0501045_0241098
320 nmdc:mga00v17_2374_c1
321 nmdc:mga00v17_3069_c1
322 nmdc:mga07m45_214937_c1
323 Ga0587111_0022153
324 2643752303
325 2643848268
326 2643885401
327 2643995709
328 2644170079
329 2644279326
330 2644680416
331 2730229870
332 2747953448
333 2758226100
334 2774384542
335 2808885664
336 2809227460
337 2812323135
338 2852634221
339 2852647491
340 2852665422
341 2857721629
342 2857724044
343 2904766815
344 2904775174
345 2908814504
346 2919420750
347 2919433492
348 2928092276
349 2939661305
350 2945972008
351 2946033613
352 2946044418
353 2946080770
354 2974297214
355 2974326553
356 2977253868
357 2977266656
358 2984580948
359 8004185010
360 8016257521

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01323

DSBA

DSBA-like thioredoxin domain

22

227

0.96

PF13462

Thioredoxin_4

Thioredoxin

16

227

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
5cnw-assembly1.cif.gz_A crystal structure of a novel disulfide oxidoreductase from deinococcus radiodurans 0.9595 11 224
5xwh-assembly1.cif.gz_A structure of frne, a novel disulfide oxidoreductase from deinococcus radiodurans crystallized in the presence of gsh 0.9565 11 225
5cp1-assembly1.cif.gz_A-2 crystal structure of c239s mutant of a novel disulfide oxidoreductase from deinococcus radiodurans 0.9185 3 223
3gl5-assembly1.cif.gz_A-2 crystal structure of probable dsba oxidoreductase sco1869 from streptomyces coelicolor 0.9058 11 222
5xwh-assembly1.cif.gz_A structure of frne, a novel disulfide oxidoreductase from deinococcus radiodurans crystallized in the presence of gsh 0.8873 11 225
ID Description Score Start End Superfamily
5xwhA01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9577 11 221 3.40.30.10
5xwhA01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9488 11 221 3.40.30.10
5cp1A00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9185 3 223 3.40.30.10
3gl5A01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9019 12 221 3.40.30.10
af_I1KWJ3_9_211_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9005 11 218 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A7Y2LXF0-F1-model_v4 DsbA family oxidoreductase 0.9846 10 227 GO:0016491
AF-A0A1I2D258-F1-model_v4 Predicted dithiol-disulfide isomerase, DsbA family 0.9774 9 227 GO:0016491
GO:0016853
AF-A0A163Q2Q0-F1-model_v4 DSBA-like thioredoxin domain protein 0.9762 9 228 GO:0016491
AF-A0A5R1NQW5-F1-model_v4 DsbA family oxidoreductase 0.9745 9 229 GO:0016491
AF-A0A0M9CC56-F1-model_v4 deleted 0.9742 9 226

Map