F275798

General Info

Members Datasets Scaffolds Average Seq Length
180 106 178 506

Family's Representative Sequence

Representative Sequence 3300028577|Ga0265318_10000234|Ga0265318_1000023431
Length 553
Sequence MDEAKGANGGNARGPSLAAAVVGSGFGGLAAAIRLQAAGYAVTLFEARDKPGGRAYVYTDQGFTFDAGPTVITAPGCLEELFALGGERMSDSVELLPVHPFYRLLWSDGKQLDYAGGAEFMDAQIAVLAPGDRAGFKRFLAYSRRVFEAGYEELAATPFLRFSDMVRVAPELMRLRADRSVYGAVSKFVKDEHLRQALSFHALLVGGNPFETSAIYTLIPYLERKWGVWFPRGGTGALVAGLVGLFERLGGKLRLACPVAHIEVEGAAPDAPGARAGQAGNEVVAARHRVFGGATSSVELGVFDLVVSNADIHQTYARLYAGAPGADVKRRRLERMDWSMSLFVLYFGTNRRYPGTAHHSVLFGPRYRELLREVFHGPDLPDDFSLYLHAPTVTDPSLAPEGCETFYVLAPVPHLGNARVDWAAYQEEYADRILAALERHLPDVRKHVVTRRIFTPREFESELGAYQGSAFSVAPQLGQSAYFRPHNRDERIPGLYIAGAGTHPGAGVPGVVNSAKATVATILRDHRPDRPAGLVSSLAPTNHDDTKPPAVAA

Samples

Sample ID Description Type Environment
1 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
2 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
40 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
41 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
42 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
43 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
44 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
45 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
46 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
47 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
48 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
49 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
52 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
53 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
54 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
55 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
56 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
59 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
60 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
61 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
62 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
63 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
64 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
65 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
66 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
67 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
70 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
71 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
72 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
73 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
74 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
75 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
76 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
83 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
84 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
87 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
88 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
89 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
90 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
91 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
92 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
95 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
96 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
97 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
98 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
99 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
100 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
101 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
102 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
103 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
104 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
105 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
106 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.89
Metatranscriptomes 0
Isolates 1.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.44
Nodule 0
Rhizoplane 3.33
Rhizosphere 85.56
Stem 0
Stem Tuber 0
Unclassified 6.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10135306 3300003320 Bacteria 10807
2 rootH1_10028430 3300003323 Unclassified 2526
3 rootH1_10028431 3300003323 Bacteria 7602
4 rootH1_10037903 3300003323 Bacteria 9383
5 rootH1_10084084 3300003323 Bacteria 4067
6 rootH1_10112524 3300003323 Bacteria 5162
7 rootH1_10241630 3300003323 Bacteria 2082
8 Ga0070658_10009447 3300005327 Bacteria 7839
9 Ga0070682_100001011 3300005337 Bacteria 16294
10 Ga0070682_100016243 3300005337 Bacteria 4326
11 Ga0070703_10002223 3300005406 Bacteria 5643
12 Ga0070705_100008846 3300005440 Bacteria 4992
13 Ga0070706_100114933 3300005467 Bacteria 2506
14 Ga0070698_100000669 3300005471 Bacteria 36535
15 Ga0070698_100021563 3300005471 Bacteria 6747
16 Ga0070698_100112626 3300005471 Bacteria 2685
17 Ga0070679_100000304 3300005530 Bacteria 41995
18 Ga0070679_100107385 3300005530 Bacteria 2777
19 Ga0068853_100000826 3300005539 Bacteria 21641
20 Ga0070672_100000099 3300005543 Bacteria 42800
21 Ga0068855_100000025 3300005563 Bacteria 178174
22 Ga0068855_100022846 3300005563 Bacteria 7496
23 Ga0068856_100096194 3300005614 Bacteria 2950
24 Ga0081540_1000425 3300005983 Bacteria 41644
25 Ga0070717_10124084 3300006028 Bacteria 2215
26 Ga0097621_100051555 3300006237 Bacteria 3349
27 Ga0068871_100024977 3300006358 Bacteria 4642
28 Ga0068871_100090078 3300006358 Bacteria 2554
29 Ga0075428_100024175 3300006844 Bacteria 6721
30 Ga0075435_100063173 3300007076 Bacteria 3007
31 Ga0105240_10000413 3300009093 Bacteria 79609
32 Ga0105240_10069410 3300009093 Bacteria 4362
33 Ga0111539_10000936 3300009094 Bacteria 38225
34 Ga0111539_10038191 3300009094 Bacteria 5792
35 Ga0105245_10007159 3300009098 Bacteria 9785
36 Ga0105237_10000046 3300009545 Bacteria 168707
37 Ga0105237_10032903 3300009545 Bacteria 5250
38 Ga0105237_10091376 3300009545 Bacteria 3034
39 Ga0105238_10083040 3300009551 Bacteria 3193
40 Ga0157370_10058249 3300013104 Unclassified 3672
41 Ga0163163_10030253 3300014325 Bacteria 5215
42 Ga0157376_10042805 3300014969 Bacteria 3713
43 Ga0207695_10027541 3300025913 Bacteria 6327
44 Ga0207671_10000268 3300025914 Bacteria 77496
45 Ga0207652_10016680 3300025921 Bacteria 6002
46 Ga0207650_10027016 3300025925 Bacteria 4103
47 Ga0207687_10006917 3300025927 Bacteria 7473
48 Ga0207691_10000052 3300025940 Bacteria 93470
49 Ga0207667_10000089 3300025949 Bacteria 149275
50 Ga0207667_10162070 3300025949 Bacteria 2300
51 Ga0207639_10002556 3300026041 Bacteria 12212
52 Ga0207641_10079089 3300026088 Bacteria 2850
53 Ga0207428_10011185 3300027907 Bacteria 7960
54 Ga0265318_10000053 3300028577 Bacteria 115241
55 Ga0265318_10000234 3300028577 Bacteria 48142
56 Ga0265318_10001922 3300028577 Bacteria 11622
57 Ga0265324_10000184 3300029957 Bacteria 47974
58 Ga0265330_10000048 3300031235 Bacteria 104793
59 Ga0265330_10002176 3300031235 Bacteria 10805
60 Ga0265330_10006653 3300031235 Bacteria 5702
61 Ga0265332_10000287 3300031238 Bacteria 39650
62 Ga0265332_10000499 3300031238 Bacteria 27010
63 Ga0265328_10001378 3300031239 Bacteria 11215
64 Ga0265328_10003915 3300031239 Bacteria 6549
65 Ga0265320_10000223 3300031240 Bacteria 46106
66 Ga0265320_10004419 3300031240 Bacteria 9220
67 Ga0265320_10005166 3300031240 Bacteria 8423
68 Ga0265325_10000218 3300031241 Bacteria 40418
69 Ga0265325_10016444 3300031241 Bacteria 4136
70 Ga0265329_10000034 3300031242 Bacteria 55575
71 Ga0265340_10002925 3300031247 Bacteria 9727
72 Ga0265340_10011767 3300031247 Bacteria 4641
73 Ga0265339_10000032 3300031249 Bacteria 131153
74 Ga0265339_10009584 3300031249 Bacteria 6070
75 Ga0265339_10057300 3300031249 Bacteria 2107
76 Ga0265331_10000615 3300031250 Bacteria 30977
77 Ga0265331_10000729 3300031250 Bacteria 27742
78 Ga0265316_10001547 3300031344 Bacteria 24687
79 Ga0265316_10004257 3300031344 Bacteria 14293
80 Ga0265316_10005616 3300031344 Bacteria 12138
81 Ga0265316_10070929 3300031344 Bacteria 2686
82 Ga0265313_10000150 3300031595 Bacteria 72956
83 Ga0265313_10000412 3300031595 Bacteria 45964
84 Ga0265313_10005006 3300031595 Bacteria 9900
85 Ga0265313_10015300 3300031595 Bacteria 4476
86 Ga0265313_10022962 3300031595 Bacteria 3371
87 Ga0265313_10054171 3300031595 Bacteria 1906
88 Ga0265314_10000342 3300031711 Bacteria 65026
89 Ga0265314_10003139 3300031711 Bacteria 16216
90 Ga0265314_10003507 3300031711 Bacteria 15132
91 Ga0265314_10008074 3300031711 Bacteria 9057
92 Ga0265314_10016521 3300031711 Bacteria 5823
93 Ga0265314_10044018 3300031711 Unclassified 3168
94 Ga0265342_10000274 3300031712 Bacteria 57923
95 Ga0265342_10045667 3300031712 Bacteria 2636
96 Ga0265342_10059012 3300031712 Unclassified 2267
97 Ga0265342_10068495 3300031712 Bacteria 2074
98 Ga0316576_10025808 3300031727 Bacteria 4117
99 Ga0316578_10000705 3300031728 Bacteria 12064
100 Ga0316578_10028355 3300031728 Bacteria 3170
101 Ga0307406_10010316 3300031901 Bacteria 5264
102 Ga0373950_0000021 3300034818 Bacteria 209053
103 Ga0395905_0002912 3300037471 Bacteria 18666
104 Ga0395905_0148235 3300037471 Bacteria 2207
105 Ga0436365_1425737 3300039437 Bacteria 2868
106 Ga0436363_0781848 3300039450 Bacteria 2240
107 Ga0451789_0792627 3300041443 Bacteria 2404
108 Ga0451807_0268277 3300041486 Bacteria 5537
109 Ga0451849_0972128 3300041505 Bacteria 1853
110 Ga0451853_0321134 3300041512 Bacteria 14508
111 Ga0453683_0001812 3300044673 Bacteria 17636
112 Ga0453684_0355466 3300044712 Bacteria 1651
113 Ga0451576_0110001 3300045051 Bacteria 2868
114 Ga0495658_0008755 3300046683 Bacteria 5027
115 Ga0495687_005939 3300047443 Bacteria 7628
116 Ga0495686_0048803 3300047472 Bacteria 2667
117 Ga0496100_0032723 3300048903 Bacteria 3246
118 Ga0496101_0006132 3300048904 Bacteria 7716
119 Ga0496114_0000168 3300048917 Bacteria 46347
120 Ga0496115_0135529 3300048918 Bacteria 2030
121 Ga0501034_0000059 3300049571 Bacteria 198017
122 Ga0501036_0141794 3300049572 Bacteria 2028
123 Ga0501043_0000255 3300049579 Bacteria 48350
124 Ga0501043_0060969 3300049579 Bacteria 2962
125 Ga0501046_0000136 3300049580 Bacteria 78699
126 Ga0501047_0000035 3300049581 Bacteria 198028
127 Ga0501047_0014506 3300049581 Bacteria 7494
128 Ga0501047_0023926 3300049581 Bacteria 5865
129 Ga0501048_0001296 3300049582 Bacteria 18970
130 Ga0501067_0006137 3300049583 Bacteria 6663
131 Ga0501067_0044118 3300049583 Bacteria 2478
132 Ga0501068_0000042 3300049584 Bacteria 48007
133 Ga0501068_0007136 3300049584 Bacteria 6183
134 Ga0501069_0008091 3300049585 Bacteria 5523
135 Ga0501069_0029559 3300049585 Bacteria 3007
136 Ga0501070_0000097 3300049586 Bacteria 75748
137 Ga0501070_0049768 3300049586 Bacteria 3479
138 Ga0501070_0084535 3300049586 Bacteria 2627
139 Ga0501072_0000004 3300049588 Bacteria 282897
140 Ga0501072_0000014 3300049588 Bacteria 170672
141 Ga0501073_0000876 3300049589 Bacteria 21520
142 Ga0501073_0007647 3300049589 Bacteria 8018
143 Ga0501073_0025019 3300049589 Bacteria 4284
144 Ga0501073_0031551 3300049589 Bacteria 3780
145 Ga0501074_0000478 3300049590 Bacteria 24278
146 Ga0501074_0006313 3300049590 Bacteria 8560
147 Ga0501074_0058093 3300049590 Bacteria 2787
148 Ga0501077_0023175 3300049593 Bacteria 3936
149 Ga0501079_0000415 3300049741 Bacteria 27702
150 Ga0501079_0103388 3300049741 Bacteria 2209
151 Ga0501080_0026841 3300049742 Bacteria 5354
152 Ga0501080_0055818 3300049742 Bacteria 3678
153 Ga0501080_0141710 3300049742 Bacteria 2222
154 Ga0501083_0000744 3300049744 Bacteria 21272
155 Ga0501083_0004478 3300049744 Bacteria 9867
156 Ga0501083_0028639 3300049744 Bacteria 3838
157 Ga0501044_0090218 3300049823 Bacteria 3092
158 nmdc:mga0qj67_86634_c1 3300050509 Bacteria 2513
159 nmdc:mga08y16_1407_c1 3300050511 Bacteria 24104
160 nmdc:mga08y16_86864_c1 3300050511 Bacteria 3259
161 Ga0500566_0013968 3300053094 Bacteria 4721
162 Ga0500640_000668 3300053095 Bacteria 9035
163 Ga0500554_000118 3300053102 Bacteria 15511
164 Ga0500572_005075 3300053111 Bacteria 2980
165 Ga0500595_001522 3300053119 Bacteria 12303
166 Ga0500614_000609 3300053123 Bacteria 9149
167 Ga0500559_0003250 3300053136 Bacteria 8073
168 Ga0500601_003441 3300053737 Bacteria 1717
169 Ga0501084_0000008 3300054114 Bacteria 198002
170 Ga0501084_0000552 3300054114 Bacteria 28547
171 Ga0501084_0093935 3300054114 Bacteria 2518
172 Ga0501084_0186546 3300054114 Bacteria 1750
173 Ga0590075_007893 3300059424 Bacteria 2535
174 Ga0501082_0001085 3300060353 Bacteria 24085
175 Ga0501082_0001671 3300060353 Bacteria 19559
176 Ga0501082_0002227 3300060353 Bacteria 16953
177 Ga0501082_0008224 3300060353 Bacteria 8997
178 Ga0501082_0053719 3300060353 Bacteria 3472

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049742 Ga0501080_0141710 Ga0501080_0141710_469_1764 396
2 3300049589 Ga0501073_0025019 Ga0501073_0025019_2879_4252 449
3 3300014969 Ga0157376_10042805 Ga0157376_100428052 471
4 3300045051 Ga0451576_0110001 Ga0451576_0110001_751_2220 473
5 3300009098 Ga0105245_10007159 Ga0105245_100071594 475
6 3300025927 Ga0207687_10006917 Ga0207687_100069172 475
7 3300049590 Ga0501074_0006313 Ga0501074_0006313_2245_3696 475
8 3300041505 Ga0451849_0972128 Ga0451849_0972128_403_1842 476
9 3300029957 Ga0265324_10000184 Ga0265324_100001847 477
10 3300031241 Ga0265325_10016444 Ga0265325_100164442 477
11 3300031249 Ga0265339_10000032 Ga0265339_1000003273 477
12 3300003323 rootH1_10037903 rootH1_100379033 483
13 3300047443 Ga0495687_005939 Ga0495687_005939_4288_5766 487
14 iso_pu_bacteria 2899259804 2899261508 487
15 3300006237 Ga0097621_100051555 Ga0097621_1000515554 489
16 3300006358 Ga0068871_100024977 Ga0068871_1000249772 489
17 3300005471 Ga0070698_100021563 Ga0070698_1000215632 490
18 3300009094 Ga0111539_10000936 Ga0111539_1000093621 490
19 3300027907 Ga0207428_10011185 Ga0207428_100111854 490
20 3300050511 nmdc:mga08y16_1407_c1 nmdc:mga08y16_1407_c1_19720_21210 490
21 3300049590 Ga0501074_0058093 Ga0501074_0058093_336_1826 491
22 iso_pu_bacteria 2828305725 2828305908 491
23 3300005406 Ga0070703_10002223 Ga0070703_100022233 492
24 3300005440 Ga0070705_100008846 Ga0070705_1000088463 492
25 3300005467 Ga0070706_100114933 Ga0070706_1001149332 492
26 3300005471 Ga0070698_100112626 Ga0070698_1001126262 492
27 3300031712 Ga0265342_10045667 Ga0265342_100456671 492
28 3300049572 Ga0501036_0141794 Ga0501036_0141794_153_1655 492
29 3300049581 Ga0501047_0023926 Ga0501047_0023926_886_2385 492
30 3300049584 Ga0501068_0007136 Ga0501068_0007136_305_1807 492
31 3300049585 Ga0501069_0029559 Ga0501069_0029559_327_1835 492
32 3300049586 Ga0501070_0000097 Ga0501070_0000097_14315_15823 492
33 3300049586 Ga0501070_0084535 Ga0501070_0084535_204_1706 492
34 3300049589 Ga0501073_0031551 Ga0501073_0031551_1108_2610 492
35 3300049741 Ga0501079_0103388 Ga0501079_0103388_255_1763 492
36 3300049742 Ga0501080_0026841 Ga0501080_0026841_795_2303 492
37 3300049744 Ga0501083_0004478 Ga0501083_0004478_6813_8315 492
38 3300054114 Ga0501084_0186546 Ga0501084_0186546_186_1688 492
39 3300060353 Ga0501082_0001085 Ga0501082_0001085_12012_13520 492
40 3300060353 Ga0501082_0008224 Ga0501082_0008224_1661_3163 492
41 3300060353 Ga0501082_0053719 Ga0501082_0053719_1167_2666 492
42 3300003323 rootH1_10084084 rootH1_100840843 493
43 3300003323 rootH1_10241630 rootH1_102416302 493
44 3300005471 Ga0070698_100000669 Ga0070698_10000066933 493
45 3300006028 Ga0070717_10124084 Ga0070717_101240842 493
46 3300007076 Ga0075435_100063173 Ga0075435_1000631732 493
47 3300009545 Ga0105237_10091376 Ga0105237_100913763 493
48 3300028577 Ga0265318_10001922 Ga0265318_100019229 493
49 3300031241 Ga0265325_10000218 Ga0265325_1000021810 493
50 3300031247 Ga0265340_10011767 Ga0265340_100117672 493
51 3300031344 Ga0265316_10005616 Ga0265316_100056166 493
52 3300031595 Ga0265313_10000150 Ga0265313_1000015012 493
53 3300031711 Ga0265314_10044018 Ga0265314_100440183 493
54 3300031712 Ga0265342_10059012 Ga0265342_100590122 493
55 3300031727 Ga0316576_10025808 Ga0316576_100258082 493
56 3300031901 Ga0307406_10010316 Ga0307406_100103162 493
57 3300047472 Ga0495686_0048803 Ga0495686_0048803_534_2069 493
58 3300049579 Ga0501043_0060969 Ga0501043_0060969_571_2070 493
59 3300049581 Ga0501047_0014506 Ga0501047_0014506_1047_2546 493
60 3300049584 Ga0501068_0000042 Ga0501068_0000042_27409_28908 493
61 3300049585 Ga0501069_0008091 Ga0501069_0008091_2288_3787 493
62 3300049588 Ga0501072_0000004 Ga0501072_0000004_128714_130213 493
63 3300049589 Ga0501073_0000876 Ga0501073_0000876_16527_18026 493
64 3300049593 Ga0501077_0023175 Ga0501077_0023175_1630_3129 493
65 3300049744 Ga0501083_0028639 Ga0501083_0028639_1411_2910 493
66 3300049823 Ga0501044_0090218 Ga0501044_0090218_1048_2547 493
67 3300054114 Ga0501084_0000552 Ga0501084_0000552_17140_18639 493
68 3300060353 Ga0501082_0001671 Ga0501082_0001671_4740_6239 493
69 3300006844 Ga0075428_100024175 Ga0075428_1000241756 494
70 3300037471 Ga0395905_0002912 Ga0395905_0002912_11344_12858 494
71 3300037471 Ga0395905_0148235 Ga0395905_0148235_331_1836 494
72 3300050509 nmdc:mga0qj67_86634_c1 nmdc:mga0qj67_86634_c1_395_1933 494
73 3300053094 Ga0500566_0013968 Ga0500566_0013968_694_2196 494
74 3300053095 Ga0500640_000668 Ga0500640_000668_3830_5332 494
75 3300053102 Ga0500554_000118 Ga0500554_000118_7761_9263 494
76 3300053111 Ga0500572_005075 Ga0500572_005075_1075_2577 494
77 3300053119 Ga0500595_001522 Ga0500595_001522_7587_9089 494
78 3300053123 Ga0500614_000609 Ga0500614_000609_3312_4814 494
79 3300053136 Ga0500559_0003250 Ga0500559_0003250_3118_4620 494
80 3300053737 Ga0500601_003441 Ga0500601_003441_165_1667 494
81 3300003323 rootH1_10112524 rootH1_101125242 495
82 3300005563 Ga0068855_100000025 Ga0068855_100000025137 495
83 3300013104 Ga0157370_10058249 Ga0157370_100582493 495
84 3300025949 Ga0207667_10000089 Ga0207667_10000089111 495
85 3300026088 Ga0207641_10079089 Ga0207641_100790892 495
86 3300044712 Ga0453684_0355466 Ga0453684_0355466_51_1559 495
87 3300054114 Ga0501084_0093935 Ga0501084_0093935_474_1991 495
88 3300003323 rootH1_10028430 rootH1_100284302 496
89 3300003323 rootH1_10028431 rootH1_100284314 496
90 3300005337 Ga0070682_100001011 Ga0070682_1000010115 496
91 3300005539 Ga0068853_100000826 Ga0068853_10000082610 496
92 3300005563 Ga0068855_100022846 Ga0068855_1000228467 496
93 3300005614 Ga0068856_100096194 Ga0068856_1000961942 496
94 3300005983 Ga0081540_1000425 Ga0081540_10004258 496
95 3300009545 Ga0105237_10032903 Ga0105237_100329032 496
96 3300025925 Ga0207650_10027016 Ga0207650_100270162 496
97 3300025949 Ga0207667_10162070 Ga0207667_101620702 496
98 3300026041 Ga0207639_10002556 Ga0207639_100025564 496
99 3300031240 Ga0265320_10004419 Ga0265320_100044197 496
100 3300031711 Ga0265314_10016521 Ga0265314_100165214 496
101 3300031712 Ga0265342_10000274 Ga0265342_1000027411 496
102 3300039450 Ga0436363_0781848 Ga0436363_0781848_454_1971 496
103 3300041443 Ga0451789_0792627 Ga0451789_0792627_593_2125 496
104 3300041486 Ga0451807_0268277 Ga0451807_0268277_1410_2942 496
105 3300046683 Ga0495658_0008755 Ga0495658_0008755_661_2178 496
106 3300049583 Ga0501067_0006137 Ga0501067_0006137_37_1548 496
107 3300003320 rootH2_10135306 rootH2_101353063 497
108 3300005327 Ga0070658_10009447 Ga0070658_100094475 497
109 3300005337 Ga0070682_100016243 Ga0070682_1000162434 497
110 3300005530 Ga0070679_100000304 Ga0070679_1000003048 497
111 3300005530 Ga0070679_100107385 Ga0070679_1001073852 497
112 3300005543 Ga0070672_100000099 Ga0070672_10000009922 497
113 3300006358 Ga0068871_100090078 Ga0068871_1000900782 497
114 3300009093 Ga0105240_10000413 Ga0105240_1000041325 497
115 3300009093 Ga0105240_10069410 Ga0105240_100694104 497
116 3300009094 Ga0111539_10038191 Ga0111539_100381914 497
117 3300009545 Ga0105237_10000046 Ga0105237_10000046115 497
118 3300009551 Ga0105238_10083040 Ga0105238_100830402 497
119 3300014325 Ga0163163_10030253 Ga0163163_100302533 497
120 3300025913 Ga0207695_10027541 Ga0207695_100275414 497
121 3300025914 Ga0207671_10000268 Ga0207671_1000026852 497
122 3300025921 Ga0207652_10016680 Ga0207652_100166805 497
123 3300025940 Ga0207691_10000052 Ga0207691_1000005214 497
124 3300028577 Ga0265318_10000053 Ga0265318_1000005366 497
125 3300028577 Ga0265318_10000234 Ga0265318_1000023431 497
126 3300031235 Ga0265330_10000048 Ga0265330_1000004866 497
127 3300031235 Ga0265330_10002176 Ga0265330_100021769 497
128 3300031235 Ga0265330_10006653 Ga0265330_100066533 497
129 3300031238 Ga0265332_10000287 Ga0265332_1000028730 497
130 3300031238 Ga0265332_10000499 Ga0265332_1000049912 497
131 3300031239 Ga0265328_10001378 Ga0265328_100013788 497
132 3300031239 Ga0265328_10003915 Ga0265328_100039154 497
133 3300031240 Ga0265320_10000223 Ga0265320_100002236 497
134 3300031240 Ga0265320_10005166 Ga0265320_100051662 497
135 3300031242 Ga0265329_10000034 Ga0265329_1000003424 497
136 3300031247 Ga0265340_10002925 Ga0265340_100029255 497
137 3300031249 Ga0265339_10009584 Ga0265339_100095841 497
138 3300031249 Ga0265339_10057300 Ga0265339_100573002 497
139 3300031250 Ga0265331_10000615 Ga0265331_100006156 497
140 3300031250 Ga0265331_10000729 Ga0265331_1000072912 497
141 3300031344 Ga0265316_10001547 Ga0265316_100015478 497
142 3300031344 Ga0265316_10004257 Ga0265316_1000425710 497
143 3300031344 Ga0265316_10070929 Ga0265316_100709292 497
144 3300031595 Ga0265313_10000412 Ga0265313_1000041239 497
145 3300031595 Ga0265313_10005006 Ga0265313_100050062 497
146 3300031595 Ga0265313_10015300 Ga0265313_100153004 497
147 3300031595 Ga0265313_10022962 Ga0265313_100229623 497
148 3300031595 Ga0265313_10054171 Ga0265313_100541712 497
149 3300031711 Ga0265314_10000342 Ga0265314_1000034239 497
150 3300031711 Ga0265314_10003139 Ga0265314_100031392 497
151 3300031711 Ga0265314_10003507 Ga0265314_1000350711 497
152 3300031711 Ga0265314_10008074 Ga0265314_100080746 497
153 3300031712 Ga0265342_10068495 Ga0265342_100684952 497
154 3300031728 Ga0316578_10000705 Ga0316578_100007056 497
155 3300031728 Ga0316578_10028355 Ga0316578_100283553 497
156 3300034818 Ga0373950_0000021 Ga0373950_0000021_8525_10069 497
157 3300039437 Ga0436365_1425737 Ga0436365_1425737_697_2205 497
158 3300041512 Ga0451853_0321134 Ga0451853_0321134_9670_11232 497
159 3300044673 Ga0453683_0001812 Ga0453683_0001812_6870_8390 497
160 3300048903 Ga0496100_0032723 Ga0496100_0032723_1082_2614 497
161 3300048904 Ga0496101_0006132 Ga0496101_0006132_1379_2911 497
162 3300048917 Ga0496114_0000168 Ga0496114_0000168_21615_23147 497
163 3300048918 Ga0496115_0135529 Ga0496115_0135529_184_1716 497
164 3300049571 Ga0501034_0000059 Ga0501034_0000059_144318_145850 497
165 3300049579 Ga0501043_0000255 Ga0501043_0000255_971_2503 497
166 3300049580 Ga0501046_0000136 Ga0501046_0000136_27164_28696 497
167 3300049581 Ga0501047_0000035 Ga0501047_0000035_52304_53836 497
168 3300049582 Ga0501048_0001296 Ga0501048_0001296_12965_14497 497
169 3300049583 Ga0501067_0044118 Ga0501067_0044118_228_1742 497
170 3300049586 Ga0501070_0049768 Ga0501070_0049768_218_1750 497
171 3300049588 Ga0501072_0000014 Ga0501072_0000014_109999_111531 497
172 3300049589 Ga0501073_0007647 Ga0501073_0007647_1602_3134 497
173 3300049590 Ga0501074_0000478 Ga0501074_0000478_3583_5115 497
174 3300049741 Ga0501079_0000415 Ga0501079_0000415_4659_6191 497
175 3300049742 Ga0501080_0055818 Ga0501080_0055818_1205_2737 497
176 3300049744 Ga0501083_0000744 Ga0501083_0000744_18536_20068 497
177 3300050511 nmdc:mga08y16_86864_c1 nmdc:mga08y16_86864_c1_179_1690 497
178 3300054114 Ga0501084_0000008 Ga0501084_0000008_144192_145724 497
179 3300059424 Ga0590075_007893 Ga0590075_007893_446_1960 497
180 3300060353 Ga0501082_0002227 Ga0501082_0002227_13820_15352 497

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

21

84

0.92

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

26

523

0.86

PF01266

DAO

FAD dependent oxidoreductase

18

510

0.62

Structural Annotation

Top 5 Hits

ID Description Score Start End
4xrr-assembly1.cif.gz_A crystal structure of cals8 from micromonospora echinospora (p294s mutant) 0.9818 3 34
4xr9-assembly1.cif.gz_B crystal structure of cals8 from micromonospora echinospora cocrystallized with nad and tdp-glucose 0.9818 3 34
8oh5-assembly1.cif.gz_C cryo-em structure of the electron bifurcating transhydrogenase stnabc complex from sporomusa ovata (state 2) 0.9813 4 41
4xrr-assembly1.cif.gz_B crystal structure of cals8 from micromonospora echinospora (p294s mutant) 0.9807 3 34
3mog-assembly1.cif.gz_B crystal structure of 3-hydroxybutyryl-coa dehydrogenase from escherichia coli k12 substr. mg1655 0.9724 4 34
ID Description Score Start End Superfamily
af_I6XF25_1_136_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9981 5 34 3.40.50.720
af_A7YT47_359_542_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9963 4 34 3.40.50.720
2f1kD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9937 5 32 3.40.50.720
2hdhB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9865 4 32 3.40.50.720
4xr9B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9818 3 34 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2E5FPA6-F1-model_v4 Phytoene dehydrogenase 0.9728 5 225 GO:0016117
GO:0016491
AF-A0A2T4I7Z8-F1-model_v4 Phytoene desaturase 0.9723 4 492 GO:0016117
GO:0016491
AF-A0A7M3X3D2-F1-model_v4 Phytoene dehydrogenase 0.9711 135 492 GO:0016117
GO:0016627
AF-A0A6H2DLS3-F1-model_v4 Phytoene dehydrogenase 0.9705 2 492 GO:0016117
GO:0016627
AF-B5W1V0-F1-model_v4 Phytoene dehydrogenase 0.9686 5 488 GO:0016117
GO:0016627

Feature Viewer

pLDDT pTM Quality
90.12 0.91 High
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Predicted Structure (AlphaFold2)

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