F274170

General Info

Members Datasets Scaffolds Average Seq Length
179 124 358 336

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0978278|Ga0436364_0978278_4700_5881
Length 393
Sequence VTKRFEGENGWSMQMRLPWRFVPGRDEAGALDGWPASAKMGGKQNGGSEPMDDSRPVFHHPSPDQAWLDKGAAEPIIEPERPIIDPHHHLWERGGRYFLDELLADTGSGHNVVSTVFLQCAYGYREDGPEELRPVGETEFVAGIAREAERRGSRTRVCEGIVAFAELTLGDRVVPVLEAHIEAGEGRLRGIRQVTARSEAFVASIVPPPPAGVMADPAFRAGFAELGRFALSFDTWLYHTQLGELAELARAFPGTQIVLNHVGGPLGIGPYAGKRDEVFRAWSTAIQDLGRCGNVSVKLGGLAMLVAGFHFHRLGAPPSSETLAEAWRPYVETCIEAFGPERAMFESNFPVDKAMCSYTTLWNAFKRMAAGYAEQEKAALFHNTAARVYRLRA

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
46 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
67 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
68 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
69 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
70 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
71 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
72 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
73 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
77 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
78 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
79 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
84 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
85 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
86 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
87 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
88 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
89 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
92 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
93 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
94 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
95 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
96 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
97 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
98 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
103 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
106 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
107 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
108 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
110 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
111 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
112 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
113 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
114 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
115 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
116 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
117 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
118 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
119 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
120 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
121 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
122 2952252522 Salinicola sp. DM10 Isolate Unclassified
123 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
124 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.65
Metatranscriptomes 0
Isolates 3.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.35
Nodule 0.56
Rhizoplane 3.91
Rhizosphere 79.89
Stem 0
Stem Tuber 0
Unclassified 7.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_0978278 3300037853 Bacteria 15785
2 JGI25151J46595_10001395 3300003187 Bacteria 16606
3 Ga0070658_10022498 3300005327 Bacteria 5059
4 Ga0070658_10035409 3300005327 Bacteria 4021
5 Ga0070658_10035961 3300005327 Bacteria 3991
6 Ga0070680_100074390 3300005336 Bacteria 2796
7 Ga0068868_100229121 3300005338 Bacteria 1558
8 Ga0070660_100206342 3300005339 Bacteria 1595
9 Ga0070671_100005743 3300005355 Bacteria 9881
10 Ga0070671_100058581 3300005355 Bacteria 3206
11 Ga0070659_100391653 3300005366 Bacteria 1172
12 Ga0070709_10005365 3300005434 Bacteria 6944
13 Ga0070713_100139008 3300005436 Bacteria 2149
14 Ga0070713_100193183 3300005436 Bacteria 1835
15 Ga0070713_100232215 3300005436 Unclassified 1677
16 Ga0070710_10078173 3300005437 Bacteria 1924
17 Ga0070710_10091317 3300005437 Bacteria 1797
18 Ga0070710_10242845 3300005437 Unclassified 1154
19 Ga0070711_100050375 3300005439 Unclassified 2855
20 Ga0070711_100102389 3300005439 Bacteria 2086
21 Ga0070711_100114229 3300005439 Bacteria 1987
22 Ga0070711_100153393 3300005439 Bacteria 1739
23 Ga0070708_100040252 3300005445 Bacteria 4092
24 Ga0070663_100254447 3300005455 Bacteria 1391
25 Ga0070706_100015506 3300005467 Bacteria 7039
26 Ga0070707_100009735 3300005468 Bacteria 8934
27 Ga0070698_100011409 3300005471 Bacteria 9427
28 Ga0070679_100058616 3300005530 Bacteria 3837
29 Ga0068853_100015632 3300005539 Bacteria 6235
30 Ga0068855_100002993 3300005563 Bacteria 20655
31 Ga0068857_100132127 3300005577 Bacteria 2252
32 Ga0068856_100039552 3300005614 Bacteria 4630
33 Ga0068856_100059743 3300005614 Bacteria 3765
34 Ga0068856_100061738 3300005614 Bacteria 3702
35 Ga0070702_100225329 3300005615 Unclassified 1256
36 Ga0068852_100403380 3300005616 Bacteria 1345
37 Ga0068858_100013353 3300005842 Bacteria 7748
38 Ga0068860_100318146 3300005843 Bacteria 1527
39 Ga0081455_10000741 3300005937 Bacteria 42399
40 Ga0081455_10001391 3300005937 Bacteria 29870
41 Ga0081539_10020002 3300005985 Bacteria 4552
42 Ga0070717_10298190 3300006028 Bacteria 1433
43 Ga0075368_10030914 3300006042 Bacteria 2075
44 Ga0070712_100001054 3300006175 Bacteria 16643
45 Ga0075369_10004152 3300006186 Bacteria 5331
46 Ga0075435_100407024 3300007076 Bacteria 1170
47 Ga0099794_10077661 3300007265 Bacteria 1634
48 Ga0099795_10010843 3300007788 Bacteria 2700
49 Ga0114129_10297473 3300009147 Unclassified 2152
50 Ga0105248_10323203 3300009177 Bacteria 1738
51 Ga0105238_10098712 3300009551 Bacteria 2904
52 Ga0099796_10005813 3300010159 Bacteria 3108
53 Ga0157370_10075394 3300013104 Bacteria 3180
54 Ga0157370_10433226 3300013104 Bacteria 1209
55 Ga0157369_10055499 3300013105 Bacteria 4276
56 Ga0157369_10186744 3300013105 Bacteria 2179
57 Ga0157379_10288801 3300014968 Bacteria 1493
58 Ga0213876_10016623 3300021384 Bacteria 3888
59 Ga0213875_10003623 3300021388 Bacteria 8736
60 Ga0213875_10007173 3300021388 Bacteria 5788
61 Ga0209025_1000049 3300025294 Bacteria 333459
62 Ga0207699_10035650 3300025906 Bacteria 2832
63 Ga0207699_10050627 3300025906 Bacteria 2451
64 Ga0207699_10184609 3300025906 Bacteria 1404
65 Ga0207705_10017328 3300025909 Bacteria 5158
66 Ga0207705_10034438 3300025909 Bacteria 3621
67 Ga0207684_10009873 3300025910 Bacteria 8421
68 Ga0207707_10012194 3300025912 Bacteria 7473
69 Ga0207695_10027675 3300025913 Bacteria 6309
70 Ga0207693_10031501 3300025915 Bacteria 4189
71 Ga0207693_10038839 3300025915 Bacteria 3748
72 Ga0207693_10040050 3300025915 Bacteria 3690
73 Ga0207693_10068788 3300025915 Unclassified 2772
74 Ga0207693_10139446 3300025915 Bacteria 1907
75 Ga0207663_10090006 3300025916 Bacteria 2034
76 Ga0207663_10208684 3300025916 Bacteria 1414
77 Ga0207657_10096565 3300025919 Bacteria 2458
78 Ga0207646_10003847 3300025922 Bacteria 16671
79 Ga0207694_10170438 3300025924 Bacteria 1762
80 Ga0207700_10019343 3300025928 Bacteria 4597
81 Ga0207700_10029860 3300025928 Bacteria 3852
82 Ga0207700_10041026 3300025928 Bacteria 3383
83 Ga0207664_10102789 3300025929 Unclassified 2363
84 Ga0207664_10112682 3300025929 Bacteria 2265
85 Ga0207664_10183570 3300025929 Bacteria 1797
86 Ga0207664_10201691 3300025929 Bacteria 1717
87 Ga0207664_10221434 3300025929 Bacteria 1641
88 Ga0207644_10013692 3300025931 Bacteria 5414
89 Ga0207667_10005533 3300025949 Bacteria 15418
90 Ga0207703_10105587 3300026035 Bacteria 2394
91 Ga0207639_10012847 3300026041 Bacteria 5842
92 Ga0207678_10236998 3300026067 Bacteria 1562
93 Ga0207702_10033685 3300026078 Bacteria 4280
94 Ga0207702_10053663 3300026078 Bacteria 3413
95 Ga0207674_10047701 3300026116 Bacteria 4389
96 Ga0268265_10215699 3300028380 Bacteria 1676
97 Ga0373934_0027883 3300035086 Bacteria 2197
98 Ga0373957_0014582 3300035120 Bacteria 2689
99 Ga0373943_0016402 3300035170 Bacteria 3378
100 Ga0373943_0037860 3300035170 Bacteria 2317
101 Ga0373955_0016438 3300035172 Bacteria 3642
102 Ga0373931_0092497 3300035691 Bacteria 1687
103 Ga0373933_0010282 3300035724 Bacteria 5126
104 Ga0373933_0300261 3300035724 Bacteria 1039
105 Ga0373947_0101289 3300035725 Bacteria 1810
106 Ga0373937_0095430 3300036401 Bacteria 2757
107 Ga0373937_0272229 3300036401 Unclassified 1598
108 Ga0395898_0024613 3300037466 Bacteria 6072
109 Ga0436364_0066259 3300037853 Bacteria 5553
110 Ga0436364_0244108 3300037853 Bacteria 4807
111 Ga0436364_0989787 3300037853 Unclassified 2295
112 Ga0436364_1081164 3300037853 Bacteria 1298
113 Ga0436364_1373616 3300037853 Bacteria 99108
114 Ga0436365_0205420 3300039437 Bacteria 1530
115 Ga0436365_0265485 3300039437 Bacteria 1262
116 Ga0436365_0699062 3300039437 Bacteria 4657
117 Ga0436365_0874854 3300039437 Bacteria 6016
118 Ga0436365_1877809 3300039437 Bacteria 1436
119 Ga0436360_0067293 3300039438 Bacteria 3721
120 Ga0436360_0924712 3300039438 Bacteria 2030
121 Ga0436360_1309453 3300039438 Bacteria 3891
122 Ga0436361_0754097 3300039447 Bacteria 2591
123 Ga0436361_1158030 3300039447 Bacteria 1869
124 Ga0436363_0677534 3300039450 Bacteria 2687
125 Ga0436363_0823488 3300039450 Bacteria 1587
126 Ga0436362_0104339 3300039453 Bacteria 1283
127 Ga0436362_0384030 3300039453 Bacteria 3134
128 Ga0451577_0097500 3300042876 Bacteria 2626
129 Ga0466963_0089225 3300044694 Bacteria 2097
130 Ga0466967_0042406 3300045976 Bacteria 3932
131 Ga0495592_0100141 3300046454 Unclassified 2066
132 Ga0495583_0048660 3300046506 Bacteria 1945
133 Ga0495608_0164360 3300046511 Bacteria 1410
134 Ga0495648_0058235 3300046524 Bacteria 2311
135 Ga0495652_0078305 3300046529 Bacteria 2737
136 Ga0495652_0217827 3300046529 Unclassified 1436
137 Ga0495665_0143490 3300046531 Bacteria 1247
138 Ga0495640_0066711 3300046533 Bacteria 2427
139 Ga0495640_0093851 3300046533 Bacteria 1977
140 Ga0495645_0050031 3300046543 Unclassified 3043
141 Ga0495667_0003386 3300046559 Bacteria 10678
142 Ga0495625_0163043 3300046660 Bacteria 1492
143 Ga0495635_0005590 3300046663 Bacteria 8755
144 Ga0495646_0008006 3300046680 Bacteria 6716
145 Ga0495658_0111576 3300046683 Bacteria 1645
146 Ga0495604_0061999 3300047317 Bacteria 2859
147 Ga0495680_0158592 3300047322 Bacteria 1644
148 Ga0495675_0063567 3300047444 Bacteria 2335
149 Ga0496104_0150854 3300048907 Bacteria 2231
150 Ga0496108_0243505 3300048911 Bacteria 1564
151 Ga0496109_0066007 3300048912 Bacteria 3313
152 Ga0496112_0218480 3300048915 Bacteria 1862
153 Ga0496113_0113465 3300048916 Bacteria 2112
154 Ga0496113_0210970 3300048916 Bacteria 1546
155 Ga0496115_0173216 3300048918 Bacteria 1784
156 Ga0496119_0030480 3300048922 Bacteria 3635
157 Ga0496120_0060383 3300048923 Bacteria 2121
158 Ga0496126_0027354 3300048929 Bacteria 5449
159 Ga0496126_0101397 3300048929 Bacteria 2518
160 Ga0501034_0041736 3300049571 Bacteria 4642
161 Ga0501034_0151350 3300049571 Bacteria 2296
162 Ga0501071_0131238 3300049587 Bacteria 1861
163 Ga0501075_0180833 3300049591 Bacteria 1609
164 nmdc:mga0rr50_383840_c1 3300050513 Bacteria 1185
165 nmdc:mga0a205_122747_c1 3300050515 Bacteria 2497
166 nmdc:mga0a205_140604_c3 3300050515 Unclassified 1515
167 nmdc:mga0sz30_55109_c1 3300050516 Bacteria 1692
168 Ga0495601_0013050 3300053077 Bacteria 4993
169 Ga0495612_0128212 3300053078 Bacteria 1095
170 Ga0495595_0003909 3300053084 Bacteria 5946
171 Ga0495595_0149625 3300053084 Bacteria 1148
172 Ga0495619_0006136 3300053085 Bacteria 7613
173 Ga0500642_0097813 3300053130 Bacteria 1362
174 2904542190 2904541872 Bacteria 8915136
175 2929167475 2929160207 Bacteria 9075316
176 2939632519 2939631187 Bacteria 6118131
177 2952253882 2952252522 Bacteria 4171745
178 3000020354 3000017691 Bacteria 3772574
179 8055307938 8055301274 Bacteria 8587385
180 Ga0436364_0978278
181 JGI25151J46595_10001395
182 Ga0070658_10022498
183 Ga0070658_10035409
184 Ga0070658_10035961
185 Ga0070680_100074390
186 Ga0068868_100229121
187 Ga0070660_100206342
188 Ga0070671_100005743
189 Ga0070671_100058581
190 Ga0070659_100391653
191 Ga0070709_10005365
192 Ga0070713_100139008
193 Ga0070713_100193183
194 Ga0070713_100232215
195 Ga0070710_10078173
196 Ga0070710_10091317
197 Ga0070710_10242845
198 Ga0070711_100050375
199 Ga0070711_100102389
200 Ga0070711_100114229
201 Ga0070711_100153393
202 Ga0070708_100040252
203 Ga0070663_100254447
204 Ga0070706_100015506
205 Ga0070707_100009735
206 Ga0070698_100011409
207 Ga0070679_100058616
208 Ga0068853_100015632
209 Ga0068855_100002993
210 Ga0068857_100132127
211 Ga0068856_100039552
212 Ga0068856_100059743
213 Ga0068856_100061738
214 Ga0070702_100225329
215 Ga0068852_100403380
216 Ga0068858_100013353
217 Ga0068860_100318146
218 Ga0081455_10000741
219 Ga0081455_10001391
220 Ga0081539_10020002
221 Ga0070717_10298190
222 Ga0075368_10030914
223 Ga0070712_100001054
224 Ga0075369_10004152
225 Ga0075435_100407024
226 Ga0099794_10077661
227 Ga0099795_10010843
228 Ga0114129_10297473
229 Ga0105248_10323203
230 Ga0105238_10098712
231 Ga0099796_10005813
232 Ga0157370_10075394
233 Ga0157370_10433226
234 Ga0157369_10055499
235 Ga0157369_10186744
236 Ga0157379_10288801
237 Ga0213876_10016623
238 Ga0213875_10003623
239 Ga0213875_10007173
240 Ga0209025_1000049
241 Ga0207699_10035650
242 Ga0207699_10050627
243 Ga0207699_10184609
244 Ga0207705_10017328
245 Ga0207705_10034438
246 Ga0207684_10009873
247 Ga0207707_10012194
248 Ga0207695_10027675
249 Ga0207693_10031501
250 Ga0207693_10038839
251 Ga0207693_10040050
252 Ga0207693_10068788
253 Ga0207693_10139446
254 Ga0207663_10090006
255 Ga0207663_10208684
256 Ga0207657_10096565
257 Ga0207646_10003847
258 Ga0207694_10170438
259 Ga0207700_10019343
260 Ga0207700_10029860
261 Ga0207700_10041026
262 Ga0207664_10102789
263 Ga0207664_10112682
264 Ga0207664_10183570
265 Ga0207664_10201691
266 Ga0207664_10221434
267 Ga0207644_10013692
268 Ga0207667_10005533
269 Ga0207703_10105587
270 Ga0207639_10012847
271 Ga0207678_10236998
272 Ga0207702_10033685
273 Ga0207702_10053663
274 Ga0207674_10047701
275 Ga0268265_10215699
276 Ga0373934_0027883
277 Ga0373957_0014582
278 Ga0373943_0016402
279 Ga0373943_0037860
280 Ga0373955_0016438
281 Ga0373931_0092497
282 Ga0373933_0010282
283 Ga0373933_0300261
284 Ga0373947_0101289
285 Ga0373937_0095430
286 Ga0373937_0272229
287 Ga0395898_0024613
288 Ga0436364_0066259
289 Ga0436364_0244108
290 Ga0436364_0989787
291 Ga0436364_1081164
292 Ga0436364_1373616
293 Ga0436365_0205420
294 Ga0436365_0265485
295 Ga0436365_0699062
296 Ga0436365_0874854
297 Ga0436365_1877809
298 Ga0436360_0067293
299 Ga0436360_0924712
300 Ga0436360_1309453
301 Ga0436361_0754097
302 Ga0436361_1158030
303 Ga0436363_0677534
304 Ga0436363_0823488
305 Ga0436362_0104339
306 Ga0436362_0384030
307 Ga0451577_0097500
308 Ga0466963_0089225
309 Ga0466967_0042406
310 Ga0495592_0100141
311 Ga0495583_0048660
312 Ga0495608_0164360
313 Ga0495648_0058235
314 Ga0495652_0078305
315 Ga0495652_0217827
316 Ga0495665_0143490
317 Ga0495640_0066711
318 Ga0495640_0093851
319 Ga0495645_0050031
320 Ga0495667_0003386
321 Ga0495625_0163043
322 Ga0495635_0005590
323 Ga0495646_0008006
324 Ga0495658_0111576
325 Ga0495604_0061999
326 Ga0495680_0158592
327 Ga0495675_0063567
328 Ga0496104_0150854
329 Ga0496108_0243505
330 Ga0496109_0066007
331 Ga0496112_0218480
332 Ga0496113_0113465
333 Ga0496113_0210970
334 Ga0496115_0173216
335 Ga0496119_0030480
336 Ga0496120_0060383
337 Ga0496126_0027354
338 Ga0496126_0101397
339 Ga0501034_0041736
340 Ga0501034_0151350
341 Ga0501071_0131238
342 Ga0501075_0180833
343 nmdc:mga0rr50_383840_c1
344 nmdc:mga0a205_122747_c1
345 nmdc:mga0a205_140604_c3
346 nmdc:mga0sz30_55109_c1
347 Ga0495601_0013050
348 Ga0495612_0128212
349 Ga0495595_0003909
350 Ga0495595_0149625
351 Ga0495619_0006136
352 Ga0500642_0097813
353 2904542190
354 2929167475
355 2939632519
356 2952253882
357 3000020354
358 8055307938

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04909

Amidohydro_2

Amidohydrolase

84

391

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8pbn-assembly1.cif.gz_A-2 mutant r1789q of the dihydroorotase domain of human cad protein bound to the inhibitor fluoorotate 0.726 36 261
6hg3-assembly1.cif.gz_A-2 hybrid dihydroorotase domain of human cad with e. coli flexible loop, bound to dihydroorotate 0.7082 38 261
4c6n-assembly1.cif.gz_A-2 crystal structure of the dihydroorotase domain of human cad e1637t mutant bound to substrate at ph 6.0 0.6979 35 261
6gde-assembly1.cif.gz_A dihydroorotase from aquifex aeolicus standard (p,t) 0.6832 38 256
1xrf-assembly1.cif.gz_A the crystal structure of a novel, latent dihydroorotase from aquifex aeolicus at 1.7 a resolution 0.6652 38 256
ID Description Score Start End Superfamily
4c6lA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.6163 36 288 3.20.20.140
3cjpA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.6119 37 256 3.20.20.140
4do7B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.6099 38 330 3.20.20.140
4do7B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.6021 38 330 3.20.20.140
af_A0A0R0I5V7_77_195_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.6013 198 259 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A7W6T362-F1-model_v4 Putative TIM-barrel fold metal-dependent hydrolase 0.9819 35 293 GO:0016787
AF-A0A382AHS5-F1-model_v4 Amidohydrolase-related domain-containing protein 0.9785 20 293 GO:0016787
AF-A0A2N3E088-F1-model_v4 Amidohydrolase 0.972 21 249 GO:0016787
AF-A0A3D0ZZL1-F1-model_v4 Amidohydrolase 0.971 59 293 GO:0016787
AF-A0A2V6ZJS4-F1-model_v4 Amidohydrolase 0.9709 21 293 GO:0016787

Map