F274118

General Info

Members Datasets Scaffolds Average Seq Length
179 149 175 483

Family's Representative Sequence

Representative Sequence 3300035171|Ga0373946_0033853|Ga0373946_0033853_374_1987
Length 524
Sequence MWPNPGFSGAFAGIWRGRFTKNYALACFDRAENPQKSGRPMTMSVANIAEDASPLRGLLPLWVGVAIYGLFLLAGNRLLIDPDTMWQITVGQWILDHGAVPETDIYSFTMRGQPWISTQWLAQVIYAKAYALAGWSGPVVLAAGAIAATFALLTRFLSRRLGESTTLVFVAAALALTVPHLAWVGGLIAAADRREAPSFWLLPLMVLWANLHGGFVFGLMMIAPVALDAVLSADPKLRASLVLRWAAFGVAALVASCCTPYGWNSLLASQKILALGGALPLIMEWRPADFGSIGPFEICLLLGIGLALFRGVKLPPLRIVLLLGLLHMALSQGRAAEILALVAPLVLAAPLARQFGGAELSTSTGAQPIRSVLFAGLATLLVAGTVAYASVHRFEPHMRGSPVAAVAELKKLNLARVFNDYDFGGYLIANGVETFIDGRTELFGETFFVDHNAASGLMKPENLFRLLEQYNIEATLMRTQSAATKLLDHIDGWQKVYTDDIATIHVRKPGAVHRAEPAVDPKAK

Samples

Sample ID Description Type Environment
1 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
2 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
3 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
24 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
35 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
37 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
53 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
54 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
55 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
58 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
59 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
60 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
61 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
62 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
63 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
64 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
65 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
66 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
67 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
68 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
69 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
70 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
71 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
75 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
76 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
77 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
80 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
81 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
82 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
83 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
84 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
85 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
86 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
87 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
88 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
89 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
90 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
91 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
97 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
98 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
99 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
104 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
105 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
111 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
112 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
119 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
128 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
135 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
136 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
137 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
138 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
139 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
140 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
141 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
142 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
143 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
144 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
145 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
146 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
147 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
148 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
149 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.77
Metatranscriptomes 0
Isolates 2.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.29
Nodule 1.68
Rhizoplane 5.03
Rhizosphere 75.42
Stem 0
Stem Tuber 0
Unclassified 5.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10026964 3300001979 Bacteria 1917
2 JGI25406J46586_10000537 3300003203 Bacteria 17737
3 JGI25153J46596_10004990 3300003215 Bacteria 7044
4 rootL2_10028664 3300003322 Bacteria 2620
5 rootL2_10051326 3300003322 Bacteria 1957
6 Ga0070683_100038465 3300005329 Bacteria 4387
7 Ga0070660_100038775 3300005339 Bacteria 3618
8 Ga0070668_100081731 3300005347 Bacteria 2533
9 Ga0070674_100059994 3300005356 Bacteria 2650
10 Ga0070714_100020527 3300005435 Bacteria 5397
11 Ga0070684_100008832 3300005535 Bacteria 7900
12 Ga0068853_100026827 3300005539 Bacteria 4839
13 Ga0068857_100089364 3300005577 Bacteria 2756
14 Ga0068852_100157315 3300005616 Bacteria 2118
15 Ga0068861_100149079 3300005719 Bacteria 1917
16 Ga0068851_10022214 3300005834 Bacteria 3087
17 Ga0081455_10006378 3300005937 Bacteria 12662
18 Ga0081455_10062410 3300005937 Bacteria 3132
19 Ga0081540_1033870 3300005983 Bacteria 2765
20 Ga0081539_10000191 3300005985 Bacteria 142387
21 Ga0081539_10000321 3300005985 Bacteria 106887
22 Ga0070717_10000895 3300006028 Bacteria 19768
23 Ga0070717_10025171 3300006028 Bacteria 4729
24 Ga0099794_10014025 3300007265 Bacteria 3502
25 Ga0105250_10010001 3300009092 Bacteria 3972
26 Ga0105240_10044168 3300009093 Bacteria 5665
27 Ga0105240_10046966 3300009093 Bacteria 5466
28 Ga0105241_10002281 3300009174 Bacteria 14414
29 Ga0105237_10030294 3300009545 Bacteria 5497
30 Ga0105237_10183153 3300009545 Bacteria 2094
31 Ga0105238_10017785 3300009551 Bacteria 7227
32 Ga0105249_10254750 3300009553 Bacteria 1741
33 Ga0157369_10022416 3300013105 Bacteria 7047
34 Ga0157375_10115339 3300013308 Bacteria 2789
35 Ga0163163_10012414 3300014325 Bacteria 7761
36 Ga0157379_10055593 3300014968 Bacteria 3536
37 Ga0213871_10011875 3300021441 Bacteria 2008
38 Ga0209677_101244 3300025253 Bacteria 11496
39 Ga0209233_1002549 3300025261 Bacteria 6640
40 Ga0209455_1006766 3300025272 Bacteria 3341
41 Ga0209758_1016059 3300025297 Bacteria 3827
42 Ga0207699_10038610 3300025906 Bacteria 2738
43 Ga0207654_10017577 3300025911 Bacteria 3742
44 Ga0207707_10009394 3300025912 Bacteria 8483
45 Ga0207707_10100317 3300025912 Bacteria 2530
46 Ga0207695_10001543 3300025913 Bacteria 37956
47 Ga0207657_10012588 3300025919 Bacteria 8340
48 Ga0207694_10024505 3300025924 Bacteria 4583
49 Ga0207664_10048341 3300025929 Bacteria 3345
50 Ga0207689_10032785 3300025942 Bacteria 4318
51 Ga0207667_10031439 3300025949 Bacteria 5731
52 Ga0207678_10053722 3300026067 Bacteria 3471
53 Ga0207702_10000005 3300026078 Bacteria 420296
54 Ga0207674_10007409 3300026116 Bacteria 12786
55 Ga0207674_10042555 3300026116 Bacteria 4691
56 Ga0207698_10155925 3300026142 Bacteria 1989
57 Ga0265323_10001677 3300028653 Bacteria 10585
58 Ga0265336_10000169 3300028666 Bacteria 45875
59 Ga0265338_10000624 3300028800 Bacteria 61670
60 Ga0265339_10000560 3300031249 Bacteria 29070
61 Ga0307508_10064274 3300031616 Bacteria 3235
62 Ga0265314_10011990 3300031711 Bacteria 7108
63 Ga0265314_10040333 3300031711 Bacteria 3352
64 Ga0373923_0025906 3300035111 Bacteria 2329
65 Ga0373936_0008669 3300035113 Bacteria 3829
66 Ga0373953_0012764 3300035117 Bacteria 2983
67 Ga0373954_0011360 3300035118 Bacteria 3944
68 Ga0373956_0008941 3300035119 Bacteria 4059
69 Ga0373956_0012071 3300035119 Bacteria 3573
70 Ga0373957_0011962 3300035120 Bacteria 2910
71 Ga0373946_0033853 3300035171 Bacteria 2059
72 Ga0373955_0001714 3300035172 Bacteria 9379
73 Ga0373955_0025405 3300035172 Bacteria 3041
74 Ga0373924_0008927 3300035410 Bacteria 3662
75 Ga0373935_0000733 3300035692 Bacteria 17482
76 Ga0373927_0002264 3300035695 Bacteria 14111
77 Ga0373933_0001094 3300035724 Bacteria 16171
78 Ga0373933_0008813 3300035724 Bacteria 5499
79 Ga0373947_0002643 3300035725 Bacteria 10768
80 Ga0373937_0217257 3300036401 Bacteria 1799
81 Ga0373925_0003737 3300037068 Bacteria 11690
82 Ga0436364_1084217 3300037853 Bacteria 1527
83 Ga0436365_0223753 3300039437 Bacteria 3524
84 Ga0436365_1668331 3300039437 Bacteria 2286
85 Ga0436360_0071152 3300039438 Bacteria 2995
86 Ga0436361_0414806 3300039447 Bacteria 6935
87 Ga0436362_0431970 3300039453 Bacteria 4116
88 Ga0466967_0103741 3300045976 Bacteria 2602
89 Ga0495592_0003243 3300046454 Bacteria 11660
90 Ga0495592_0033767 3300046454 Bacteria 3858
91 Ga0495603_0002182 3300046455 Bacteria 11513
92 Ga0495629_0000226 3300046459 Bacteria 50363
93 Ga0495629_0010881 3300046459 Bacteria 6615
94 Ga0495641_0004116 3300046461 Bacteria 10477
95 Ga0495651_0015398 3300046462 Bacteria 5913
96 Ga0495653_0001440 3300046463 Bacteria 18560
97 Ga0495580_0002229 3300046472 Bacteria 16931
98 Ga0495582_0000106 3300046473 Bacteria 43588
99 Ga0495639_0000912 3300046475 Bacteria 13341
100 Ga0495662_0000112 3300046476 Bacteria 30326
101 Ga0495585_0038688 3300046492 Bacteria 2684
102 Ga0495594_0000233 3300046499 Bacteria 26932
103 Ga0495606_0001093 3300046507 Bacteria 38858
104 Ga0495608_0003778 3300046511 Bacteria 10874
105 Ga0495620_0016870 3300046515 Bacteria 3653
106 Ga0495628_0108736 3300046516 Bacteria 2134
107 Ga0495630_0005733 3300046517 Bacteria 8780
108 Ga0495644_0033577 3300046523 Bacteria 1938
109 Ga0495652_0011285 3300046529 Bacteria 8084
110 Ga0495665_0000254 3300046531 Bacteria 26918
111 Ga0495640_0003800 3300046533 Bacteria 12124
112 Ga0495640_0036600 3300046533 Bacteria 3467
113 Ga0495640_0058197 3300046533 Bacteria 2636
114 Ga0495587_0021099 3300046536 Bacteria 4017
115 Ga0495622_0007295 3300046557 Bacteria 5132
116 Ga0495667_0000942 3300046559 Bacteria 18781
117 Ga0495667_0082642 3300046559 Bacteria 2086
118 Ga0495634_0001436 3300046642 Bacteria 21216
119 Ga0495634_0011109 3300046642 Bacteria 6567
120 Ga0495635_0000551 3300046663 Bacteria 23870
121 Ga0495635_0003067 3300046663 Bacteria 11493
122 Ga0495588_0002805 3300046674 Bacteria 7489
123 Ga0495657_0004386 3300046675 Bacteria 11259
124 Ga0495646_0043693 3300046680 Bacteria 2742
125 Ga0495658_0000964 3300046683 Bacteria 15307
126 Ga0495613_0004538 3300046689 Bacteria 10410
127 Ga0495624_0005560 3300046690 Bacteria 9067
128 Ga0495600_0003636 3300046809 Bacteria 9093
129 Ga0495581_0000010 3300047315 Bacteria 64779
130 Ga0495674_0000082 3300047319 Bacteria 65609
131 Ga0495674_0017152 3300047319 Bacteria 6745
132 Ga0495676_0053854 3300047321 Bacteria 3203
133 Ga0495680_0013038 3300047322 Bacteria 7270
134 Ga0495675_0000922 3300047444 Bacteria 17875
135 Ga0495684_0003531 3300047471 Bacteria 12235
136 Ga0495684_0076323 3300047471 Bacteria 2545
137 Ga0495593_0000366 3300047673 Bacteria 24885
138 Ga0495593_0017141 3300047673 Bacteria 4076
139 Ga0495602_0030514 3300048088 Bacteria 5111
140 Ga0496101_0092628 3300048904 Bacteria 2250
141 Ga0496102_0297350 3300048905 Bacteria 1521
142 Ga0496104_0043661 3300048907 Bacteria 4210
143 Ga0496105_0099856 3300048908 Bacteria 2397
144 Ga0496109_0042787 3300048912 Bacteria 4105
145 Ga0496112_0000037 3300048915 Bacteria 96876
146 Ga0496112_0001776 3300048915 Bacteria 16939
147 Ga0496115_0039573 3300048918 Bacteria 3745
148 Ga0496115_0050607 3300048918 Bacteria 3329
149 Ga0496118_0018205 3300048921 Bacteria 6346
150 Ga0496121_0020182 3300048924 Bacteria 6613
151 Ga0496126_0063406 3300048929 Bacteria 3313
152 Ga0501037_0036915 3300049573 Bacteria 3601
153 Ga0501072_0021602 3300049588 Bacteria 4991
154 Ga0501044_0086347 3300049823 Bacteria 3169
155 nmdc:mga0rr50_81556_c1 3300050513 Bacteria 2496
156 Ga0500635_0002676 3300053080 Bacteria 4420
157 Ga0495595_0021841 3300053084 Bacteria 2801
158 Ga0495619_0000689 3300053085 Bacteria 22113
159 Ga0495619_0033470 3300053085 Bacteria 3338
160 Ga0500651_0027475 3300053093 Bacteria 3578
161 Ga0500566_0000319 3300053094 Bacteria 25989
162 Ga0500640_001670 3300053095 Bacteria 6893
163 Ga0500554_002295 3300053102 Bacteria 3741
164 Ga0500572_001180 3300053111 Bacteria 7478
165 Ga0500572_001353 3300053111 Bacteria 6795
166 Ga0500595_006028 3300053119 Bacteria 5205
167 Ga0500595_015720 3300053119 Bacteria 2835
168 Ga0500559_0003520 3300053136 Bacteria 7668
169 Ga0500603_000095 3300053150 Bacteria 20945
170 Ga0500603_005322 3300053150 Bacteria 2763
171 Ga0500630_004568 3300053159 Bacteria 6732
172 Ga0500639_000014 3300053163 Bacteria 122926
173 Ga0500637_0012014 3300053178 Bacteria 4500
174 Ga0500596_000663 3300053735 Bacteria 6657
175 Ga0500596_003556 3300053735 Bacteria 2942

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049573 Ga0501037_0036915 Ga0501037_0036915_1971_3428 420
2 3300049823 Ga0501044_0086347 Ga0501044_0086347_260_1717 420
3 3300046680 Ga0495646_0043693 Ga0495646_0043693_1414_2730 427
4 3300003322 rootL2_10028664 rootL2_100286642 428
5 3300048905 Ga0496102_0297350 Ga0496102_0297350_52_1491 433
6 3300046559 Ga0495667_0000942 Ga0495667_0000942_7993_9330 434
7 3300013308 Ga0157375_10115339 Ga0157375_101153393 437
8 3300014325 Ga0163163_10012414 Ga0163163_100124147 437
9 3300014968 Ga0157379_10055593 Ga0157379_100555933 437
10 3300048907 Ga0496104_0043661 Ga0496104_0043661_919_2412 437
11 3300048908 Ga0496105_0099856 Ga0496105_0099856_338_1831 437
12 3300048912 Ga0496109_0042787 Ga0496109_0042787_1707_3200 437
13 3300048915 Ga0496112_0001776 Ga0496112_0001776_4368_5861 437
14 3300048918 Ga0496115_0050607 Ga0496115_0050607_186_1679 437
15 3300048929 Ga0496126_0063406 Ga0496126_0063406_1978_3300 439
16 3300005937 Ga0081455_10062410 Ga0081455_100624101 445
17 3300053119 Ga0500595_006028 Ga0500595_006028_2173_3657 447
18 3300053093 Ga0500651_0027475 Ga0500651_0027475_1926_3410 448
19 3300048904 Ga0496101_0092628 Ga0496101_0092628_97_1590 450
20 3300003215 JGI25153J46596_10004990 JGI25153J46596_100049904 453
21 3300046492 Ga0495585_0038688 Ga0495585_0038688_17_1462 454
22 3300046515 Ga0495620_0016870 Ga0495620_0016870_1925_3370 454
23 3300046523 Ga0495644_0033577 Ga0495644_0033577_203_1648 454
24 3300005347 Ga0070668_100081731 Ga0070668_1000817311 455
25 3300005356 Ga0070674_100059994 Ga0070674_1000599942 455
26 3300026067 Ga0207678_10053722 Ga0207678_100537222 455
27 3300005719 Ga0068861_100149079 Ga0068861_1001490792 456
28 3300009092 Ga0105250_10010001 Ga0105250_100100012 456
29 3300009553 Ga0105249_10254750 Ga0105249_102547501 456
30 3300025942 Ga0207689_10032785 Ga0207689_100327852 456
31 3300049588 Ga0501072_0021602 Ga0501072_0021602_17_1483 456
32 3300028653 Ga0265323_10001677 Ga0265323_100016773 459
33 3300028666 Ga0265336_10000169 Ga0265336_1000016928 459
34 3300028800 Ga0265338_10000624 Ga0265338_1000062438 459
35 3300025297 Ga0209758_1016059 Ga0209758_10160594 460
36 3300003322 rootL2_10051326 rootL2_100513261 461
37 3300005937 Ga0081455_10006378 Ga0081455_100063781 462
38 3300053111 Ga0500572_001353 Ga0500572_001353_1119_2615 462
39 3300053136 Ga0500559_0003520 Ga0500559_0003520_1097_2593 462
40 3300053735 Ga0500596_003556 Ga0500596_003556_238_1734 462
41 3300009093 Ga0105240_10044168 Ga0105240_100441684 463
42 3300035119 Ga0373956_0012071 Ga0373956_0012071_428_1921 463
43 3300046533 Ga0495640_0036600 Ga0495640_0036600_1429_2922 463
44 3300005983 Ga0081540_1033870 Ga0081540_10338703 464
45 3300021441 Ga0213871_10011875 Ga0213871_100118752 464
46 3300035113 Ga0373936_0008669 Ga0373936_0008669_272_1771 464
47 3300053094 Ga0500566_0000319 Ga0500566_0000319_10061_11560 464
48 3300053095 Ga0500640_001670 Ga0500640_001670_5164_6663 464
49 3300053111 Ga0500572_001180 Ga0500572_001180_3202_4701 464
50 3300053150 Ga0500603_000095 Ga0500603_000095_14264_15763 464
51 3300053159 Ga0500630_004568 Ga0500630_004568_4728_6227 464
52 3300053163 Ga0500639_000014 Ga0500639_000014_75409_76908 464
53 3300053735 Ga0500596_000663 Ga0500596_000663_3769_5268 464
54 3300047321 Ga0495676_0053854 Ga0495676_0053854_757_2319 466
55 3300025912 Ga0207707_10009394 Ga0207707_100093945 467
56 3300036401 Ga0373937_0217257 Ga0373937_0217257_188_1720 467
57 3300053119 Ga0500595_015720 Ga0500595_015720_436_1920 467
58 3300005329 Ga0070683_100038465 Ga0070683_1000384653 468
59 3300005339 Ga0070660_100038775 Ga0070660_1000387751 468
60 3300005539 Ga0068853_100026827 Ga0068853_1000268272 468
61 3300025919 Ga0207657_10012588 Ga0207657_100125884 468
62 3300039437 Ga0436365_1668331 Ga0436365_1668331_66_1547 469
63 3300025253 Ga0209677_101244 Ga0209677_1012449 472
64 3300025272 Ga0209455_1006766 Ga0209455_10067662 472
65 3300031711 Ga0265314_10011990 Ga0265314_100119903 472
66 3300045976 Ga0466967_0103741 Ga0466967_0103741_13_1506 472
67 3300046809 Ga0495600_0003636 Ga0495600_0003636_7607_9058 472
68 3300048921 Ga0496118_0018205 Ga0496118_0018205_3039_4532 472
69 3300048924 Ga0496121_0020182 Ga0496121_0020182_3638_5131 472
70 3300003203 JGI25406J46586_10000537 JGI25406J46586_1000053720 473
71 3300005985 Ga0081539_10000321 Ga0081539_1000032144 473
72 3300025261 Ga0209233_1002549 Ga0209233_10025492 473
73 3300005435 Ga0070714_100020527 Ga0070714_1000205272 474
74 3300025906 Ga0207699_10038610 Ga0207699_100386101 474
75 3300025929 Ga0207664_10048341 Ga0207664_100483413 474
76 3300037853 Ga0436364_1084217 Ga0436364_1084217_18_1514 474
77 3300048915 Ga0496112_0000037 Ga0496112_0000037_48859_50340 474
78 iso_pu_bacteria 2922361189 2922366692 475
79 iso_pu_bacteria 8006984368 8006993109 475
80 3300046507 Ga0495606_0001093 Ga0495606_0001093_12443_13927 476
81 3300031249 Ga0265339_10000560 Ga0265339_100005608 477
82 3300053085 Ga0495619_0033470 Ga0495619_0033470_1642_3201 478
83 3300005985 Ga0081539_10000191 Ga0081539_1000019195 480
84 3300025912 Ga0207707_10100317 Ga0207707_101003173 480
85 3300039437 Ga0436365_0223753 Ga0436365_0223753_1526_3013 480
86 3300005535 Ga0070684_100008832 Ga0070684_1000088327 481
87 3300006028 Ga0070717_10000895 Ga0070717_1000089515 481
88 3300035724 Ga0373933_0001094 Ga0373933_0001094_14042_15535 481
89 3300039438 Ga0436360_0071152 Ga0436360_0071152_549_2081 481
90 3300039453 Ga0436362_0431970 Ga0436362_0431970_463_1995 481
91 3300048918 Ga0496115_0039573 Ga0496115_0039573_1987_3480 481
92 3300007265 Ga0099794_10014025 Ga0099794_100140253 482
93 3300009093 Ga0105240_10046966 Ga0105240_100469666 482
94 3300013105 Ga0157369_10022416 Ga0157369_100224162 482
95 3300026116 Ga0207674_10042555 Ga0207674_100425556 482
96 3300031616 Ga0307508_10064274 Ga0307508_100642743 482
97 3300031711 Ga0265314_10040333 Ga0265314_100403331 482
98 3300039447 Ga0436361_0414806 Ga0436361_0414806_3054_4550 482
99 3300053080 Ga0500635_0002676 Ga0500635_0002676_2181_3674 482
100 3300053102 Ga0500554_002295 Ga0500554_002295_160_1653 482
101 3300053150 Ga0500603_005322 Ga0500603_005322_1197_2690 482
102 3300053178 Ga0500637_0012014 Ga0500637_0012014_2253_3746 482
103 3300009545 Ga0105237_10030294 Ga0105237_100302944 483
104 3300035171 Ga0373946_0033853 Ga0373946_0033853_374_1987 483
105 3300035172 Ga0373955_0025405 Ga0373955_0025405_1337_2950 483
106 3300035692 Ga0373935_0000733 Ga0373935_0000733_13728_15341 483
107 3300035695 Ga0373927_0002264 Ga0373927_0002264_4474_6087 483
108 3300035725 Ga0373947_0002643 Ga0373947_0002643_1941_3554 483
109 3300037068 Ga0373925_0003737 Ga0373925_0003737_4454_6067 483
110 3300046454 Ga0495592_0033767 Ga0495592_0033767_165_1778 483
111 3300046455 Ga0495603_0002182 Ga0495603_0002182_2686_4299 483
112 3300046459 Ga0495629_0000226 Ga0495629_0000226_7187_8800 483
113 3300046461 Ga0495641_0004116 Ga0495641_0004116_6552_8165 483
114 3300046472 Ga0495580_0002229 Ga0495580_0002229_11012_12625 483
115 3300046473 Ga0495582_0000106 Ga0495582_0000106_7182_8795 483
116 3300046475 Ga0495639_0000912 Ga0495639_0000912_2470_4083 483
117 3300046476 Ga0495662_0000112 Ga0495662_0000112_5154_6767 483
118 3300046499 Ga0495594_0000233 Ga0495594_0000233_2135_3748 483
119 3300046517 Ga0495630_0005733 Ga0495630_0005733_1345_2958 483
120 3300046531 Ga0495665_0000254 Ga0495665_0000254_7371_8984 483
121 3300046533 Ga0495640_0003800 Ga0495640_0003800_7195_8808 483
122 3300046557 Ga0495622_0007295 Ga0495622_0007295_1267_2880 483
123 3300046559 Ga0495667_0082642 Ga0495667_0082642_116_1729 483
124 3300046642 Ga0495634_0001436 Ga0495634_0001436_15001_16614 483
125 3300046663 Ga0495635_0003067 Ga0495635_0003067_4648_6261 483
126 3300046674 Ga0495588_0002805 Ga0495588_0002805_3418_5031 483
127 3300046683 Ga0495658_0000964 Ga0495658_0000964_8911_10524 483
128 3300046689 Ga0495613_0004538 Ga0495613_0004538_4638_6251 483
129 3300046690 Ga0495624_0005560 Ga0495624_0005560_273_1886 483
130 3300047315 Ga0495581_0000010 Ga0495581_0000010_60909_62522 483
131 3300047319 Ga0495674_0000082 Ga0495674_0000082_56825_58438 483
132 3300047471 Ga0495684_0076323 Ga0495684_0076323_145_1758 483
133 3300047673 Ga0495593_0000366 Ga0495593_0000366_16089_17702 483
134 3300050513 nmdc:mga0rr50_81556_c1 nmdc:mga0rr50_81556_c1_210_1703 484
135 3300035111 Ga0373923_0025906 Ga0373923_0025906_84_1577 486
136 3300035118 Ga0373954_0011360 Ga0373954_0011360_688_2181 486
137 3300035119 Ga0373956_0008941 Ga0373956_0008941_961_2454 486
138 3300035120 Ga0373957_0011962 Ga0373957_0011962_64_1557 486
139 3300035172 Ga0373955_0001714 Ga0373955_0001714_958_2451 486
140 3300035410 Ga0373924_0008927 Ga0373924_0008927_54_1547 486
141 3300035724 Ga0373933_0008813 Ga0373933_0008813_2760_4253 486
142 3300046454 Ga0495592_0003243 Ga0495592_0003243_9704_11197 486
143 3300046459 Ga0495629_0010881 Ga0495629_0010881_2390_3883 486
144 3300046462 Ga0495651_0015398 Ga0495651_0015398_3839_5332 486
145 3300046463 Ga0495653_0001440 Ga0495653_0001440_14405_15898 486
146 3300046511 Ga0495608_0003778 Ga0495608_0003778_4396_5889 486
147 3300046516 Ga0495628_0108736 Ga0495628_0108736_294_1787 486
148 3300046529 Ga0495652_0011285 Ga0495652_0011285_5209_6702 486
149 3300046533 Ga0495640_0058197 Ga0495640_0058197_505_1998 486
150 3300046536 Ga0495587_0021099 Ga0495587_0021099_1293_2786 486
151 3300046642 Ga0495634_0011109 Ga0495634_0011109_1362_2855 486
152 3300046663 Ga0495635_0000551 Ga0495635_0000551_21058_22551 486
153 3300046675 Ga0495657_0004386 Ga0495657_0004386_4936_6429 486
154 3300047319 Ga0495674_0017152 Ga0495674_0017152_895_2388 486
155 3300047322 Ga0495680_0013038 Ga0495680_0013038_970_2463 486
156 3300047444 Ga0495675_0000922 Ga0495675_0000922_7210_8703 486
157 3300047471 Ga0495684_0003531 Ga0495684_0003531_6964_8457 486
158 3300047673 Ga0495593_0017141 Ga0495593_0017141_394_1887 486
159 3300048088 Ga0495602_0030514 Ga0495602_0030514_3165_4658 486
160 3300053084 Ga0495595_0021841 Ga0495595_0021841_684_2177 486
161 3300053085 Ga0495619_0000689 Ga0495619_0000689_2046_3539 486
162 3300006028 Ga0070717_10025171 Ga0070717_100251713 490
163 iso_pu_bacteria 2513237141 2513892142 490
164 iso_pu_bacteria 2508501128 2509151824 491
165 3300035117 Ga0373953_0012764 Ga0373953_0012764_1462_2955 496
166 3300001979 JGI24740J21852_10026964 JGI24740J21852_100269641 497
167 3300005577 Ga0068857_100089364 Ga0068857_1000893642 497
168 3300005616 Ga0068852_100157315 Ga0068852_1001573151 497
169 3300005834 Ga0068851_10022214 Ga0068851_100222143 497
170 3300009174 Ga0105241_10002281 Ga0105241_100022812 497
171 3300009545 Ga0105237_10183153 Ga0105237_101831532 497
172 3300009551 Ga0105238_10017785 Ga0105238_100177855 497
173 3300025911 Ga0207654_10017577 Ga0207654_100175773 497
174 3300025913 Ga0207695_10001543 Ga0207695_100015435 497
175 3300025924 Ga0207694_10024505 Ga0207694_100245053 497
176 3300025949 Ga0207667_10031439 Ga0207667_100314395 497
177 3300026078 Ga0207702_10000005 Ga0207702_10000005289 497
178 3300026116 Ga0207674_10007409 Ga0207674_1000740914 497
179 3300026142 Ga0207698_10155925 Ga0207698_101559252 497

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vu0-assembly1.cif.gz_A crystal structure of the c-terminal globular domain of oligosaccharyltransferase (afaglb-s2, af_0040, o30195_arcfu) from archaeoglobus fulgidus 0.7216 376 480
3vu0-assembly3.cif.gz_C crystal structure of the c-terminal globular domain of oligosaccharyltransferase (afaglb-s2, af_0040, o30195_arcfu) from archaeoglobus fulgidus 0.7088 376 480
3vu0-assembly2.cif.gz_B crystal structure of the c-terminal globular domain of oligosaccharyltransferase (afaglb-s2, af_0040, o30195_arcfu) from archaeoglobus fulgidus 0.6809 388 480
7oci-assembly1.cif.gz_F cryo-em structure of yeast ost6p containing oligosaccharyltransferase complex 0.6357 17 488
6s7t-assembly1.cif.gz_A cryo-em structure of human oligosaccharyltransferase complex ost-b 0.6258 14 497
ID Description Score Start End Superfamily
2grvB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.507 432 484 3.40.190.10
af_Q9JI51_1_100_1.20.58.400 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;t-snare proteins 0.3926 153 246 1.20.58.400
af_Q9JI51_1_100_1.20.58.400 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;t-snare proteins 0.3498 153 246 1.20.58.400
af_A0A1D6GQZ5_2_154_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.3339 113 255 1.25.10.10
af_G5EDW2_237_357_1.25.40.610 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.33 123 240 1.25.40.610
ID Description Score Start End GO Terms
AF-A0A0E4BTE6-F1-model_v4 Uncharacterized protein 0.9724 390 482
AF-Q6N7V7-F1-model_v4 Glycosyltransferase RgtA/B/C/D-like domain-containing protein 0.9669 19 479 GO:0016020
AF-A0A528CIA1-F1-model_v4 Glycosyltransferase RgtA/B/C/D-like domain-containing protein 0.9592 21 327 GO:0016020
AF-Q6N7V7-F1-model_v4 Glycosyltransferase RgtA/B/C/D-like domain-containing protein 0.9587 19 479 GO:0016020
AF-A0A1H1W109-F1-model_v4 Glycosyltransferase RgtA/B/C/D-like domain-containing protein 0.9576 1 494 GO:0016020

Feature Viewer

pLDDT pTM Quality
83.22 0.82 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map