F274105

General Info

Members Datasets Scaffolds Average Seq Length
179 65 350 327

Family's Representative Sequence

Representative Sequence 3300032126|Ga0307415_100233127|Ga0307415_1002331272
Length 389
Sequence MPAGSCTTGRISRSGIGAWPLTSTESSKAPNSRLARGTANEVRVSHKPQDGQADRRSDSAERAGAGGQGDQMKTILLLIGFIMANINITEAQQPTKIPRIGYVSGTGSATNQGPYIEALRQGLRDLGYVEGKNIAIEFRGAKGKNEEIPNLVKELVQDKVNVLVVPIPSAVRTAKQATRTIPIVIVGGDPVADGIVDSLARPGGNITGIAMLGKRLELIKQAIPRLSRVGVLQHIESKGISFAEYEAAARALKIQVQSLEVRGEIPDVERAFETAVKERLNALITVTTASLFLQRKRIADLAIKNRLPSMYHGSAWVESGGLMSYSANDMEAFRRAASYIDKILKGTKPADLPIEQPTKFEFVVNLKTAKQIGLTIPQSVLVRADRVIK

Samples

Sample ID Description Type Environment
1 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
10 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
13 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
18 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
23 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
24 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
27 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
28 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
29 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
30 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
31 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
32 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
33 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
34 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
35 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
36 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
37 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
38 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
39 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
40 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
41 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
42 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
43 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
44 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
45 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
46 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
47 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
48 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
49 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
50 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
51 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
52 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
53 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
54 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
55 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
56 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
57 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
58 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
59 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
60 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
61 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
62 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
63 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
64 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
65 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.56
Rhizosphere 99.44
Stem 0
Stem Tuber 0
Unclassified 29.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307415_100233127 3300032126 Unclassified 1484
2 Ga0065712_10000679 3300005290 Bacteria 13869
3 Ga0065715_10004651 3300005293 Bacteria 6592
4 Ga0065715_10094246 3300005293 Bacteria 4357
5 Ga0065707_10095281 3300005295 Bacteria 3397
6 Ga0065707_10180612 3300005295 Unclassified 1421
7 Ga0070683_100455157 3300005329 Bacteria 1221
8 Ga0070708_100049175 3300005445 Bacteria 3729
9 Ga0070662_100308066 3300005457 Bacteria 1288
10 Ga0070707_100060362 3300005468 Bacteria 3637
11 Ga0070707_100171794 3300005468 Unclassified 2112
12 Ga0070697_100038953 3300005536 Bacteria 3841
13 Ga0070664_100340900 3300005564 Bacteria 1361
14 Ga0081455_10000684 3300005937 Bacteria 44044
15 Ga0081455_10001144 3300005937 Bacteria 33205
16 Ga0081455_10027409 3300005937 Bacteria 5222
17 Ga0081455_10196039 3300005937 Bacteria 1517
18 Ga0081538_10023145 3300005981 Bacteria 4475
19 Ga0081538_10028824 3300005981 Bacteria 3808
20 Ga0081538_10102009 3300005981 Unclassified 1441
21 Ga0070716_100089937 3300006173 Unclassified 1856
22 Ga0075428_100146174 3300006844 Bacteria 2569
23 Ga0075428_100229561 3300006844 Unclassified 2003
24 Ga0075428_100272667 3300006844 Bacteria 1820
25 Ga0075428_100305727 3300006844 Unclassified 1709
26 Ga0075428_100349647 3300006844 Unclassified 1587
27 Ga0075428_100431659 3300006844 Bacteria 1412
28 Ga0075430_100153325 3300006846 Bacteria 1918
29 Ga0075431_100089271 3300006847 Unclassified 3182
30 Ga0075431_100093645 3300006847 Bacteria 3100
31 Ga0075431_100234151 3300006847 Bacteria 1870
32 Ga0075431_100357919 3300006847 Bacteria 1466
33 Ga0075433_10020866 3300006852 Bacteria 5484
34 Ga0075433_10025618 3300006852 Bacteria 4988
35 Ga0075433_10043949 3300006852 Bacteria 3880
36 Ga0075433_10047023 3300006852 Bacteria 3753
37 Ga0075433_10067281 3300006852 Bacteria 3144
38 Ga0075433_10086011 3300006852 Bacteria 2776
39 Ga0075433_10156464 3300006852 Bacteria 2028
40 Ga0075433_10245119 3300006852 Bacteria 1591
41 Ga0075433_10270636 3300006852 Bacteria 1505
42 Ga0075433_10327676 3300006852 Unclassified 1354
43 Ga0075433_10387832 3300006852 Bacteria 1233
44 Ga0075434_100076743 3300006871 Bacteria 3336
45 Ga0075434_100088106 3300006871 Bacteria 3105
46 Ga0075434_100117952 3300006871 Bacteria 2667
47 Ga0075434_100135453 3300006871 Bacteria 2482
48 Ga0075429_100103572 3300006880 Bacteria 2485
49 Ga0075429_100161963 3300006880 Unclassified 1959
50 Ga0075429_100249170 3300006880 Unclassified 1555
51 Ga0075429_100271121 3300006880 Unclassified 1486
52 Ga0075429_100540286 3300006880 Unclassified 1021
53 Ga0075435_100025485 3300007076 Unclassified 4604
54 Ga0075435_100123790 3300007076 Bacteria 2159
55 Ga0114129_10006922 3300009147 Bacteria 16127
56 Ga0114129_10022108 3300009147 Bacteria 9025
57 Ga0114129_10063597 3300009147 Bacteria 5152
58 Ga0114129_10069930 3300009147 Bacteria 4894
59 Ga0114129_10074949 3300009147 Bacteria 4712
60 Ga0114129_10158889 3300009147 Bacteria 3090
61 Ga0114129_10184015 3300009147 Bacteria 2841
62 Ga0114129_10230387 3300009147 Bacteria 2495
63 Ga0114129_10245689 3300009147 Bacteria 2404
64 Ga0114129_10280572 3300009147 Unclassified 2226
65 Ga0114129_10300593 3300009147 Unclassified 2139
66 Ga0114129_10491656 3300009147 Unclassified 1604
67 Ga0114129_10499829 3300009147 Bacteria 1588
68 Ga0114129_10538389 3300009147 Unclassified 1520
69 Ga0114129_10593882 3300009147 Bacteria 1435
70 Ga0114129_10855022 3300009147 Bacteria 1156
71 Ga0157378_10135571 3300013297 Bacteria 2282
72 Ga0157378_10266051 3300013297 Unclassified 1647
73 Ga0163162_10082721 3300013306 Bacteria 3283
74 Ga0207697_10099854 3300025315 Bacteria 1236
75 Ga0207646_10074604 3300025922 Bacteria 3030
76 Ga0207646_10114124 3300025922 Bacteria 2425
77 Ga0207428_10060154 3300027907 Bacteria 3010
78 Ga0307408_100033942 3300031548 Bacteria 3569
79 Ga0307408_100219586 3300031548 Bacteria 1550
80 Ga0307405_10114934 3300031731 Bacteria 1830
81 Ga0307410_10114127 3300031852 Unclassified 1960
82 Ga0307406_10108641 3300031901 Bacteria 1905
83 Ga0307409_100019573 3300031995 Unclassified 4588
84 Ga0307416_100022130 3300032002 Unclassified 4581
85 Ga0307416_100029383 3300032002 Unclassified 4106
86 Ga0307414_10006446 3300032004 Bacteria 6546
87 Ga0307411_10021728 3300032005 Unclassified 3762
88 Ga0307411_10125353 3300032005 Unclassified 1867
89 Ga0307411_10299444 3300032005 Bacteria 1289
90 Ga0307415_100160662 3300032126 Bacteria 1741
91 Ga0373932_0021199 3300035112 Bacteria 1714
92 Ga0373956_0070915 3300035119 Unclassified 1590
93 Ga0373931_0043022 3300035691 Bacteria 2377
94 Ga0373925_0112573 3300037068 Unclassified 2104
95 Ga0495580_0041271 3300046472 Bacteria 3291
96 Ga0496112_0002868 3300048915 Bacteria 14011
97 Ga0501033_0081658 3300049570 Bacteria 2371
98 Ga0501036_0073484 3300049572 Bacteria 2891
99 Ga0501038_0045256 3300049574 Bacteria 3821
100 Ga0501039_0003836 3300049575 Bacteria 11289
101 Ga0501040_0003318 3300049576 Bacteria 10407
102 Ga0501040_0026513 3300049576 Unclassified 3898
103 Ga0501041_0026067 3300049577 Bacteria 3514
104 Ga0501042_0002390 3300049578 Bacteria 11506
105 Ga0501042_0021956 3300049578 Bacteria 4455
106 Ga0501072_0001964 3300049588 Bacteria 15322
107 Ga0501072_0084307 3300049588 Unclassified 2519
108 Ga0501075_0018976 3300049591 Bacteria 4986
109 Ga0501075_0257035 3300049591 Bacteria 1331
110 Ga0501076_0000549 3300049592 Bacteria 23984
111 Ga0501077_0000628 3300049593 Bacteria 21396
112 Ga0501225_0076926 3300049705 Unclassified 954
113 Ga0501079_0001109 3300049741 Bacteria 18728
114 Ga0501079_0077024 3300049741 Bacteria 2579
115 Ga0501081_0001485 3300049743 Bacteria 14387
116 Ga0501081_0009947 3300049743 Bacteria 6199
117 Ga0501045_0015439 3300049824 Bacteria 5418
118 Ga0501045_0036275 3300049824 Unclassified 3580
119 nmdc:mga05p37_147570_c1 3300050507 Bacteria 2879
120 nmdc:mga05p37_169224_c1 3300050507 Bacteria 2666
121 nmdc:mga05p37_206563_c1 3300050507 Bacteria 2376
122 nmdc:mga05p37_220338_c1 3300050507 Bacteria 2290
123 nmdc:mga05p37_23078_c1 3300050507 Bacteria 7549
124 nmdc:mga05p37_23242_c1 3300050507 Bacteria 7519
125 nmdc:mga05p37_239165_c1 3300050507 Unclassified 2184
126 nmdc:mga05p37_357945_c1 3300050507 Unclassified 1717
127 nmdc:mga05p37_442560_c1 3300050507 Bacteria 1507
128 nmdc:mga05p37_519077_c1 3300050507 Unclassified 1363
129 nmdc:mga05p37_531033_c1 3300050507 Unclassified 1344
130 nmdc:mga05p37_573334_c1 3300050507 Bacteria 1280
131 nmdc:mga05p37_574085_c1 3300050507 Bacteria 1279
132 nmdc:mga05p37_57478_c1 3300050507 Unclassified 4791
133 nmdc:mga05p37_584451_c1 3300050507 Unclassified 1264
134 nmdc:mga05p37_68169_c1 3300050507 Unclassified 4376
135 nmdc:mga09592_113036_c1 3300050508 Bacteria 2330
136 nmdc:mga09592_124125_c1 3300050508 Bacteria 2219
137 nmdc:mga09592_208508_c1 3300050508 Unclassified 1693
138 nmdc:mga09592_241606_c1 3300050508 Unclassified 1565
139 nmdc:mga09592_353891_c1 3300050508 Bacteria 1271
140 nmdc:mga09592_86884_c1 3300050508 Bacteria 2669
141 nmdc:mga06r32_110004_c1 3300050510 Unclassified 2710
142 nmdc:mga06r32_214234_c1 3300050510 Bacteria 1914
143 nmdc:mga06r32_412094_c1 3300050510 Unclassified 1333
144 nmdc:mga08y16_93279_c1 3300050511 Bacteria 3137
145 nmdc:mga0n895_109985_c1 3300050512 Bacteria 2771
146 nmdc:mga0n895_121525_c1 3300050512 Bacteria 2633
147 nmdc:mga0n895_13585_c1 3300050512 Bacteria 7356
148 nmdc:mga0n895_172130_c1 3300050512 Bacteria 2197
149 nmdc:mga0n895_196466_c1 3300050512 Bacteria 2048
150 nmdc:mga0n895_351300_c1 3300050512 Bacteria 1493
151 nmdc:mga0n895_35911_c1 3300050512 Unclassified 4782
152 nmdc:mga0n895_579068_c1 3300050512 Bacteria 1126
153 nmdc:mga0n895_65453_c1 3300050512 Bacteria 3598
154 nmdc:mga0n895_89135_c1 3300050512 Bacteria 3086
155 nmdc:mga0rr50_21330_c1 3300050513 Unclassified 4420
156 nmdc:mga0a205_107591_c1 3300050515 Bacteria 2687
157 nmdc:mga0a205_136996_c1 3300050515 Bacteria 2349
158 nmdc:mga0a205_140777_c1 3300050515 Bacteria 2313
159 nmdc:mga0a205_146566_c1 3300050515 Unclassified 2261
160 nmdc:mga0a205_196216_c1 3300050515 Bacteria 1910
161 nmdc:mga0a205_29042_c1 3300050515 Bacteria 5291
162 nmdc:mga0a205_333757_c1 3300050515 Bacteria 1386
163 nmdc:mga0a205_342718_c1 3300050515 Unclassified 1363
164 nmdc:mga0a205_367388_c1 3300050515 Unclassified 1305
165 nmdc:mga0a205_392187_c1 3300050515 Bacteria 1253
166 nmdc:mga0a205_46233_c1 3300050515 Bacteria 4198
167 nmdc:mga0a205_677499_c1 3300050515 Unclassified 882
168 nmdc:mga0a205_7393_c1 3300050515 Bacteria 7094
169 Ga0501084_0005844 3300054114 Bacteria 10124
170 Ga0501084_0220305 3300054114 Bacteria 1601
171 Ga0501082_0005540 3300060353 Bacteria 10962
172 Ga0501082_0210507 3300060353 Bacteria 1691
173 Ga0530510_0000801 3300061734 Bacteria 20461
174 Ga0530510_0132209 3300061734 Unclassified 1836
175 Ga0530510_0243786 3300061734 Unclassified 1338
176 Ga0307415_100233127
177 Ga0065712_10000679
178 Ga0065715_10004651
179 Ga0065715_10094246
180 Ga0065707_10095281
181 Ga0065707_10180612
182 Ga0070683_100455157
183 Ga0070708_100049175
184 Ga0070662_100308066
185 Ga0070707_100060362
186 Ga0070707_100171794
187 Ga0070697_100038953
188 Ga0070664_100340900
189 Ga0081455_10000684
190 Ga0081455_10001144
191 Ga0081455_10027409
192 Ga0081455_10196039
193 Ga0081538_10023145
194 Ga0081538_10028824
195 Ga0081538_10102009
196 Ga0070716_100089937
197 Ga0075428_100146174
198 Ga0075428_100229561
199 Ga0075428_100272667
200 Ga0075428_100305727
201 Ga0075428_100349647
202 Ga0075428_100431659
203 Ga0075430_100153325
204 Ga0075431_100089271
205 Ga0075431_100093645
206 Ga0075431_100234151
207 Ga0075431_100357919
208 Ga0075433_10020866
209 Ga0075433_10025618
210 Ga0075433_10043949
211 Ga0075433_10047023
212 Ga0075433_10067281
213 Ga0075433_10086011
214 Ga0075433_10156464
215 Ga0075433_10245119
216 Ga0075433_10270636
217 Ga0075433_10327676
218 Ga0075433_10387832
219 Ga0075434_100076743
220 Ga0075434_100088106
221 Ga0075434_100117952
222 Ga0075434_100135453
223 Ga0075429_100103572
224 Ga0075429_100161963
225 Ga0075429_100249170
226 Ga0075429_100271121
227 Ga0075429_100540286
228 Ga0075435_100025485
229 Ga0075435_100123790
230 Ga0114129_10006922
231 Ga0114129_10022108
232 Ga0114129_10063597
233 Ga0114129_10069930
234 Ga0114129_10074949
235 Ga0114129_10158889
236 Ga0114129_10184015
237 Ga0114129_10230387
238 Ga0114129_10245689
239 Ga0114129_10280572
240 Ga0114129_10300593
241 Ga0114129_10491656
242 Ga0114129_10499829
243 Ga0114129_10538389
244 Ga0114129_10593882
245 Ga0114129_10855022
246 Ga0157378_10135571
247 Ga0157378_10266051
248 Ga0163162_10082721
249 Ga0207697_10099854
250 Ga0207646_10074604
251 Ga0207646_10114124
252 Ga0207428_10060154
253 Ga0307408_100033942
254 Ga0307408_100219586
255 Ga0307405_10114934
256 Ga0307410_10114127
257 Ga0307406_10108641
258 Ga0307409_100019573
259 Ga0307416_100022130
260 Ga0307416_100029383
261 Ga0307414_10006446
262 Ga0307411_10021728
263 Ga0307411_10125353
264 Ga0307411_10299444
265 Ga0307415_100160662
266 Ga0373932_0021199
267 Ga0373956_0070915
268 Ga0373931_0043022
269 Ga0373925_0112573
270 Ga0495580_0041271
271 Ga0496112_0002868
272 Ga0501033_0081658
273 Ga0501036_0073484
274 Ga0501038_0045256
275 Ga0501039_0003836
276 Ga0501040_0003318
277 Ga0501040_0026513
278 Ga0501041_0026067
279 Ga0501042_0002390
280 Ga0501042_0021956
281 Ga0501072_0001964
282 Ga0501072_0084307
283 Ga0501075_0018976
284 Ga0501075_0257035
285 Ga0501076_0000549
286 Ga0501077_0000628
287 Ga0501225_0076926
288 Ga0501079_0001109
289 Ga0501079_0077024
290 Ga0501081_0001485
291 Ga0501081_0009947
292 Ga0501045_0015439
293 Ga0501045_0036275
294 nmdc:mga05p37_147570_c1
295 nmdc:mga05p37_169224_c1
296 nmdc:mga05p37_206563_c1
297 nmdc:mga05p37_220338_c1
298 nmdc:mga05p37_23078_c1
299 nmdc:mga05p37_23242_c1
300 nmdc:mga05p37_239165_c1
301 nmdc:mga05p37_357945_c1
302 nmdc:mga05p37_442560_c1
303 nmdc:mga05p37_519077_c1
304 nmdc:mga05p37_531033_c1
305 nmdc:mga05p37_573334_c1
306 nmdc:mga05p37_574085_c1
307 nmdc:mga05p37_57478_c1
308 nmdc:mga05p37_584451_c1
309 nmdc:mga05p37_68169_c1
310 nmdc:mga09592_113036_c1
311 nmdc:mga09592_124125_c1
312 nmdc:mga09592_208508_c1
313 nmdc:mga09592_241606_c1
314 nmdc:mga09592_353891_c1
315 nmdc:mga09592_86884_c1
316 nmdc:mga06r32_110004_c1
317 nmdc:mga06r32_214234_c1
318 nmdc:mga06r32_412094_c1
319 nmdc:mga08y16_93279_c1
320 nmdc:mga0n895_109985_c1
321 nmdc:mga0n895_121525_c1
322 nmdc:mga0n895_13585_c1
323 nmdc:mga0n895_172130_c1
324 nmdc:mga0n895_196466_c1
325 nmdc:mga0n895_351300_c1
326 nmdc:mga0n895_35911_c1
327 nmdc:mga0n895_579068_c1
328 nmdc:mga0n895_65453_c1
329 nmdc:mga0n895_89135_c1
330 nmdc:mga0rr50_21330_c1
331 nmdc:mga0a205_107591_c1
332 nmdc:mga0a205_136996_c1
333 nmdc:mga0a205_140777_c1
334 nmdc:mga0a205_146566_c1
335 nmdc:mga0a205_196216_c1
336 nmdc:mga0a205_29042_c1
337 nmdc:mga0a205_333757_c1
338 nmdc:mga0a205_342718_c1
339 nmdc:mga0a205_367388_c1
340 nmdc:mga0a205_392187_c1
341 nmdc:mga0a205_46233_c1
342 nmdc:mga0a205_677499_c1
343 nmdc:mga0a205_7393_c1
344 Ga0501084_0005844
345 Ga0501084_0220305
346 Ga0501082_0005540
347 Ga0501082_0210507
348 Ga0530510_0000801
349 Ga0530510_0132209
350 Ga0530510_0243786

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04392

ABC_sub_bind

ABC transporter substrate binding protein

111

388

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lkv-assembly1.cif.gz_A-2 crystal structure of conserved domain protein from vibrio cholerae o1 biovar eltor str. n16961 0.8803 29 319
3lft-assembly1.cif.gz_A the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.8698 31 319
3lft-assembly2.cif.gz_B the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.8692 33 319
3lkv-assembly1.cif.gz_A-2 crystal structure of conserved domain protein from vibrio cholerae o1 biovar eltor str. n16961 0.8635 29 319
3lft-assembly2.cif.gz_B the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.8552 33 319
ID Description Score Start End Superfamily
3lkvA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8566 29 293 3.40.50.2300
3lkvA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8512 29 293 3.40.50.2300
3lkvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8367 148 319 3.40.50.2300
3lftA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8299 148 319 3.40.50.2300
3lkvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8047 148 319 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A2V8BD40-F1-model_v4 ABC transporter substrate-binding protein 0.9509 215 306
AF-A0A2V7BQC5-F1-model_v4 ABC transporter substrate-binding protein 0.9449 20 303
AF-A0A537W4R7-F1-model_v4 ABC transporter substrate-binding protein 0.9307 56 319
AF-A0A2V6UTF7-F1-model_v4 ABC transporter substrate-binding protein 0.9295 23 317
AF-A0A2V7CN02-F1-model_v4 ABC transporter substrate-binding protein 0.9274 21 299

Map