F274061

General Info

Members Datasets Scaffolds Average Seq Length
179 129 358 338

Family's Representative Sequence

Representative Sequence 3300031616|Ga0307508_10000131|Ga0307508_1000013145
Length 380
Sequence MCSSCPPSFSASSSNDTKRSRVLAASAGLRQPSVKAVPSGVARLPKSPRILTTTVGSYPIPDWLAALPSEQAVIDATRVVFDLQRQAGIDLPTDGELYRFDVNHPDTNGMIEYFIRPMAGISSVVGRSITGEFSRHSPMGFRRKPAGVVTGQLGEGSLNLLADCQRAASVAGGAFKFTVTSPYMLARTLLDHHYGSFDKLTLALGEVLAAQMPGLPATCLQVDEANIPGNPADGPLAAKSMNLVLDAIDRGTERAVHFCFGNYGGQTIQQGNWEKLLGFLNALHTDHLVLELAHRPASDLAALKRIDKKISLGVGVIDIKVNHIETPDEVARRIEAVEKKVGPDRVRWVHPDCGFWMLKRSIADRKMEALVRGRDKYLGR

Samples

Sample ID Description Type Environment
1 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
71 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
72 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
75 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
78 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
79 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
82 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
83 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
84 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
85 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
86 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
87 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
88 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
89 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
90 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
91 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
92 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
98 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
99 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
100 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
104 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
117 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
121 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
127 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
128 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
129 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.12
Nodule 0
Rhizoplane 3.91
Rhizosphere 93.85
Stem 0
Stem Tuber 0
Unclassified 7.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307508_10000131 3300031616 Bacteria 88984
2 MBSR1b_contig_688823 2162886012 Unclassified 1784
3 Ga0065715_10114351 3300005293 Bacteria 2452
4 Ga0065707_10087964 3300005295 Bacteria 4827
5 Ga0070658_10167804 3300005327 Unclassified 1843
6 Ga0070683_100000700 3300005329 Bacteria 24378
7 Ga0070670_100004042 3300005331 Bacteria 12247
8 Ga0070670_100020672 3300005331 Bacteria 5662
9 Ga0070666_10050041 3300005335 Bacteria 2810
10 Ga0070680_100309413 3300005336 Bacteria 1340
11 Ga0070689_100012631 3300005340 Bacteria 6090
12 Ga0070689_100170849 3300005340 Bacteria 1761
13 Ga0070661_100044640 3300005344 Bacteria 3238
14 Ga0070669_100001163 3300005353 Bacteria 19202
15 Ga0070671_100031518 3300005355 Bacteria 4380
16 Ga0070659_100136713 3300005366 Bacteria 1993
17 Ga0070667_100342504 3300005367 Bacteria 1352
18 Ga0070703_10049049 3300005406 Bacteria 1343
19 Ga0070709_10147441 3300005434 Bacteria 1623
20 Ga0070684_100000084 3300005535 Bacteria 61595
21 Ga0070697_100121088 3300005536 Bacteria 2189
22 Ga0070672_100164715 3300005543 Unclassified 1841
23 Ga0070693_100003707 3300005547 Bacteria 7147
24 Ga0070704_100051128 3300005549 Bacteria 2909
25 Ga0068855_100116983 3300005563 Bacteria 3055
26 Ga0068857_100013574 3300005577 Bacteria 7096
27 Ga0068852_100551420 3300005616 Bacteria 1153
28 Ga0068859_100678135 3300005617 Bacteria 1122
29 Ga0068864_100138641 3300005618 Unclassified 2192
30 Ga0068860_100000159 3300005843 Bacteria 110374
31 Ga0068860_100377831 3300005843 Bacteria 1398
32 Ga0068862_100095300 3300005844 Bacteria 2596
33 Ga0081455_10041547 3300005937 Bacteria 4042
34 Ga0081455_10158475 3300005937 Bacteria 1737
35 Ga0075428_100004781 3300006844 Bacteria 15003
36 Ga0075428_100031133 3300006844 Bacteria 5899
37 Ga0075430_100003642 3300006846 Bacteria 12925
38 Ga0075431_100004593 3300006847 Bacteria 13549
39 Ga0075431_100129631 3300006847 Unclassified 2602
40 Ga0075431_100293441 3300006847 Bacteria 1644
41 Ga0075433_10024628 3300006852 Bacteria 5083
42 Ga0075433_10107372 3300006852 Bacteria 2475
43 Ga0075433_10199706 3300006852 Bacteria 1778
44 Ga0075434_100001076 3300006871 Bacteria 22339
45 Ga0075429_100013285 3300006880 Bacteria 7142
46 Ga0075429_100161273 3300006880 Bacteria 1964
47 Ga0097620_100678056 3300006931 Bacteria 1122
48 Ga0075435_100107521 3300007076 Bacteria 2317
49 Ga0111539_10001539 3300009094 Bacteria 30721
50 Ga0111539_10021506 3300009094 Bacteria 7937
51 Ga0111539_10023319 3300009094 Bacteria 7603
52 Ga0111539_10099247 3300009094 Bacteria 3420
53 Ga0111539_10125296 3300009094 Bacteria 3010
54 Ga0111539_10207070 3300009094 Bacteria 2286
55 Ga0114129_10004447 3300009147 Bacteria 19780
56 Ga0114129_10038569 3300009147 Bacteria 6738
57 Ga0114129_10541607 3300009147 Bacteria 1515
58 Ga0105248_10009414 3300009177 Bacteria 10755
59 Ga0105248_10078551 3300009177 Bacteria 3709
60 Ga0105249_10003651 3300009553 Bacteria 13290
61 Ga0157374_10040758 3300013296 Bacteria 4278
62 Ga0163163_10000126 3300014325 Bacteria 79511
63 Ga0163163_10056335 3300014325 Bacteria 3885
64 Ga0163163_10376958 3300014325 Bacteria 1476
65 Ga0157377_10057942 3300014745 Bacteria 2204
66 Ga0157376_10002513 3300014969 Bacteria 12431
67 Ga0207649_10029295 3300025920 Bacteria 3251
68 Ga0207681_10012209 3300025923 Bacteria 5296
69 Ga0207650_10014525 3300025925 Bacteria 5472
70 Ga0207650_10016093 3300025925 Bacteria 5222
71 Ga0207644_10038673 3300025931 Bacteria 3363
72 Ga0207690_10097015 3300025932 Bacteria 2097
73 Ga0207690_10238686 3300025932 Unclassified 1399
74 Ga0207670_10067556 3300025936 Bacteria 2460
75 Ga0207704_10415134 3300025938 Bacteria 1066
76 Ga0207691_10067355 3300025940 Bacteria 3237
77 Ga0207691_10205002 3300025940 Unclassified 1715
78 Ga0207711_10020698 3300025941 Bacteria 5489
79 Ga0207711_10046841 3300025941 Bacteria 3695
80 Ga0207661_10070984 3300025944 Bacteria 2844
81 Ga0207712_10029311 3300025961 Bacteria 3691
82 Ga0207658_10297942 3300025986 Unclassified 1388
83 Ga0207708_10166416 3300026075 Bacteria 1743
84 Ga0207641_10365852 3300026088 Bacteria 1378
85 Ga0207676_10052178 3300026095 Bacteria 3196
86 Ga0207676_10318945 3300026095 Unclassified 1426
87 Ga0207674_10020884 3300026116 Bacteria 7066
88 Ga0268264_10000946 3300028381 Bacteria 30071
89 Ga0265322_10034279 3300028654 Bacteria 1447
90 Ga0265338_10205912 3300028800 Bacteria 1480
91 Ga0265320_10009419 3300031240 Bacteria 5893
92 Ga0265325_10020683 3300031241 Bacteria 3625
93 Ga0265327_10012673 3300031251 Bacteria 5667
94 Ga0265327_10013212 3300031251 Bacteria 5499
95 Ga0307408_100021094 3300031548 Bacteria 4404
96 Ga0307408_100085597 3300031548 Bacteria 2367
97 Ga0307408_100098811 3300031548 Bacteria 2220
98 Ga0307406_10064374 3300031901 Bacteria 2379
99 Ga0307412_10044642 3300031911 Bacteria 2892
100 Ga0307409_100024990 3300031995 Bacteria 4180
101 Ga0307416_100087452 3300032002 Bacteria 2660
102 Ga0373934_0051030 3300035086 Bacteria 1640
103 Ga0373927_0261604 3300035695 Bacteria 1138
104 Ga0373925_0120342 3300037068 Unclassified 2038
105 Ga0436364_0187229 3300037853 Bacteria 1584
106 Ga0439450_001808 3300042008 Bacteria 3220
107 Ga0439464_0031491 3300042439 Bacteria 1488
108 Ga0451577_0002350 3300042876 Bacteria 22734
109 Ga0451577_0288116 3300042876 Bacteria 1488
110 Ga0453684_0096176 3300044712 Bacteria 3639
111 Ga0453684_0235264 3300044712 Bacteria 2112
112 Ga0451576_0112003 3300045051 Bacteria 2840
113 Ga0451576_0326532 3300045051 Bacteria 1606
114 Ga0495592_0089037 3300046454 Bacteria 2217
115 Ga0495651_0093795 3300046462 Bacteria 2247
116 Ga0495580_0004640 3300046472 Bacteria 11531
117 Ga0495580_0119013 3300046472 Bacteria 1834
118 Ga0495664_0034599 3300046477 Bacteria 2972
119 Ga0495628_0067296 3300046516 Bacteria 2798
120 Ga0495630_0043050 3300046517 Bacteria 3372
121 Ga0495630_0180713 3300046517 Bacteria 1609
122 Ga0495630_0192857 3300046517 Bacteria 1554
123 Ga0495666_0113059 3300046526 Bacteria 1275
124 Ga0495652_0120258 3300046529 Bacteria 2096
125 Ga0495640_0052674 3300046533 Bacteria 2793
126 Ga0495587_0098853 3300046536 Bacteria 1682
127 Ga0495645_0008326 3300046543 Bacteria 7238
128 Ga0495667_0048632 3300046559 Bacteria 2800
129 Ga0495667_0083062 3300046559 Bacteria 2080
130 Ga0495635_0070636 3300046663 Bacteria 2393
131 Ga0495657_0114707 3300046675 Bacteria 1703
132 Ga0495599_0019138 3300046678 Bacteria 4269
133 Ga0495623_0090950 3300046679 Bacteria 1873
134 Ga0495646_0129830 3300046680 Bacteria 1419
135 Ga0495613_0011567 3300046689 Bacteria 6560
136 Ga0495674_0050574 3300047319 Bacteria 3667
137 Ga0495674_0202556 3300047319 Bacteria 1646
138 Ga0495680_0144512 3300047322 Bacteria 1738
139 Ga0495684_0023189 3300047471 Bacteria 4771
140 Ga0495602_0061992 3300048088 Bacteria 3247
141 Ga0496104_0019720 3300048907 Bacteria 6174
142 Ga0496108_0000350 3300048911 Bacteria 38965
143 Ga0496109_0000257 3300048912 Bacteria 51399
144 Ga0496110_0000390 3300048913 Bacteria 29574
145 Ga0496111_0006755 3300048914 Bacteria 7475
146 Ga0496112_0001179 3300048915 Bacteria 19594
147 Ga0496113_0041127 3300048916 Bacteria 3409
148 Ga0501034_0001307 3300049571 Bacteria 33716
149 Ga0501043_0000351 3300049579 Bacteria 41929
150 Ga0501046_0000020 3300049580 Bacteria 218268
151 Ga0501046_0114944 3300049580 Bacteria 2052
152 Ga0501048_0012791 3300049582 Bacteria 6236
153 Ga0501073_0185147 3300049589 Bacteria 1441
154 Ga0501083_0000005 3300049744 Bacteria 206200
155 Ga0501035_0005007 3300049822 Bacteria 12549
156 Ga0501044_0000050 3300049823 Bacteria 143754
157 Ga0501044_0166926 3300049823 Bacteria 2175
158 nmdc:mga05p37_509726_c1 3300050507 Bacteria 1379
159 nmdc:mga05p37_8525_c1 3300050507 Bacteria 12118
160 nmdc:mga09592_256069_c1 3300050508 Bacteria 1517
161 nmdc:mga09592_26776_c1 3300050508 Bacteria 4780
162 nmdc:mga0qj67_15460_c1 3300050509 Bacteria 5779
163 nmdc:mga0qj67_76065_c1 3300050509 Bacteria 2684
164 nmdc:mga06r32_16215_c1 3300050510 Bacteria 6786
165 nmdc:mga06r32_235792_c1 3300050510 Unclassified 1817
166 nmdc:mga06r32_2906_c1 3300050510 Bacteria 15376
167 nmdc:mga08y16_104109_c1 3300050511 Bacteria 2954
168 nmdc:mga08y16_19391_c1 3300050511 Bacteria 7171
169 nmdc:mga08y16_328754_c1 3300050511 Bacteria 1573
170 nmdc:mga08y16_351467_c1 3300050511 Unclassified 1514
171 nmdc:mga08y16_523288_c1 3300050511 Bacteria 1202
172 nmdc:mga08y16_9631_c1 3300050511 Bacteria 10144
173 nmdc:mga0n895_491201_c1 3300050512 Unclassified 1237
174 nmdc:mga0rr50_69813_c1 3300050513 Bacteria 2675
175 nmdc:mga0a205_13044_c1 3300050515 Bacteria 7716
176 nmdc:mga0a205_137184_c1 3300050515 Unclassified 2347
177 nmdc:mga0a205_155798_c1 3300050515 Bacteria 2183
178 Ga0500568_0002323 3300053139 Bacteria 11282
179 Ga0500616_0020391 3300053153 Bacteria 3724
180 Ga0307508_10000131
181 MBSR1b_contig_688823
182 Ga0065715_10114351
183 Ga0065707_10087964
184 Ga0070658_10167804
185 Ga0070683_100000700
186 Ga0070670_100004042
187 Ga0070670_100020672
188 Ga0070666_10050041
189 Ga0070680_100309413
190 Ga0070689_100012631
191 Ga0070689_100170849
192 Ga0070661_100044640
193 Ga0070669_100001163
194 Ga0070671_100031518
195 Ga0070659_100136713
196 Ga0070667_100342504
197 Ga0070703_10049049
198 Ga0070709_10147441
199 Ga0070684_100000084
200 Ga0070697_100121088
201 Ga0070672_100164715
202 Ga0070693_100003707
203 Ga0070704_100051128
204 Ga0068855_100116983
205 Ga0068857_100013574
206 Ga0068852_100551420
207 Ga0068859_100678135
208 Ga0068864_100138641
209 Ga0068860_100000159
210 Ga0068860_100377831
211 Ga0068862_100095300
212 Ga0081455_10041547
213 Ga0081455_10158475
214 Ga0075428_100004781
215 Ga0075428_100031133
216 Ga0075430_100003642
217 Ga0075431_100004593
218 Ga0075431_100129631
219 Ga0075431_100293441
220 Ga0075433_10024628
221 Ga0075433_10107372
222 Ga0075433_10199706
223 Ga0075434_100001076
224 Ga0075429_100013285
225 Ga0075429_100161273
226 Ga0097620_100678056
227 Ga0075435_100107521
228 Ga0111539_10001539
229 Ga0111539_10021506
230 Ga0111539_10023319
231 Ga0111539_10099247
232 Ga0111539_10125296
233 Ga0111539_10207070
234 Ga0114129_10004447
235 Ga0114129_10038569
236 Ga0114129_10541607
237 Ga0105248_10009414
238 Ga0105248_10078551
239 Ga0105249_10003651
240 Ga0157374_10040758
241 Ga0163163_10000126
242 Ga0163163_10056335
243 Ga0163163_10376958
244 Ga0157377_10057942
245 Ga0157376_10002513
246 Ga0207649_10029295
247 Ga0207681_10012209
248 Ga0207650_10014525
249 Ga0207650_10016093
250 Ga0207644_10038673
251 Ga0207690_10097015
252 Ga0207690_10238686
253 Ga0207670_10067556
254 Ga0207704_10415134
255 Ga0207691_10067355
256 Ga0207691_10205002
257 Ga0207711_10020698
258 Ga0207711_10046841
259 Ga0207661_10070984
260 Ga0207712_10029311
261 Ga0207658_10297942
262 Ga0207708_10166416
263 Ga0207641_10365852
264 Ga0207676_10052178
265 Ga0207676_10318945
266 Ga0207674_10020884
267 Ga0268264_10000946
268 Ga0265322_10034279
269 Ga0265338_10205912
270 Ga0265320_10009419
271 Ga0265325_10020683
272 Ga0265327_10012673
273 Ga0265327_10013212
274 Ga0307408_100021094
275 Ga0307408_100085597
276 Ga0307408_100098811
277 Ga0307406_10064374
278 Ga0307412_10044642
279 Ga0307409_100024990
280 Ga0307416_100087452
281 Ga0373934_0051030
282 Ga0373927_0261604
283 Ga0373925_0120342
284 Ga0436364_0187229
285 Ga0439450_001808
286 Ga0439464_0031491
287 Ga0451577_0002350
288 Ga0451577_0288116
289 Ga0453684_0096176
290 Ga0453684_0235264
291 Ga0451576_0112003
292 Ga0451576_0326532
293 Ga0495592_0089037
294 Ga0495651_0093795
295 Ga0495580_0004640
296 Ga0495580_0119013
297 Ga0495664_0034599
298 Ga0495628_0067296
299 Ga0495630_0043050
300 Ga0495630_0180713
301 Ga0495630_0192857
302 Ga0495666_0113059
303 Ga0495652_0120258
304 Ga0495640_0052674
305 Ga0495587_0098853
306 Ga0495645_0008326
307 Ga0495667_0048632
308 Ga0495667_0083062
309 Ga0495635_0070636
310 Ga0495657_0114707
311 Ga0495599_0019138
312 Ga0495623_0090950
313 Ga0495646_0129830
314 Ga0495613_0011567
315 Ga0495674_0050574
316 Ga0495674_0202556
317 Ga0495680_0144512
318 Ga0495684_0023189
319 Ga0495602_0061992
320 Ga0496104_0019720
321 Ga0496108_0000350
322 Ga0496109_0000257
323 Ga0496110_0000390
324 Ga0496111_0006755
325 Ga0496112_0001179
326 Ga0496113_0041127
327 Ga0501034_0001307
328 Ga0501043_0000351
329 Ga0501046_0000020
330 Ga0501046_0114944
331 Ga0501048_0012791
332 Ga0501073_0185147
333 Ga0501083_0000005
334 Ga0501035_0005007
335 Ga0501044_0000050
336 Ga0501044_0166926
337 nmdc:mga05p37_509726_c1
338 nmdc:mga05p37_8525_c1
339 nmdc:mga09592_256069_c1
340 nmdc:mga09592_26776_c1
341 nmdc:mga0qj67_15460_c1
342 nmdc:mga0qj67_76065_c1
343 nmdc:mga06r32_16215_c1
344 nmdc:mga06r32_235792_c1
345 nmdc:mga06r32_2906_c1
346 nmdc:mga08y16_104109_c1
347 nmdc:mga08y16_19391_c1
348 nmdc:mga08y16_328754_c1
349 nmdc:mga08y16_351467_c1
350 nmdc:mga08y16_523288_c1
351 nmdc:mga08y16_9631_c1
352 nmdc:mga0n895_491201_c1
353 nmdc:mga0rr50_69813_c1
354 nmdc:mga0a205_13044_c1
355 nmdc:mga0a205_137184_c1
356 nmdc:mga0a205_155798_c1
357 Ga0500568_0002323
358 Ga0500616_0020391

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01717

Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

201

374

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2nq5-assembly1.cif.gz_A crystal structure of methyltransferase from streptococcus mutans 0.8248 5 334
3rpd-assembly2.cif.gz_B the structure of a b12-independent methionine synthase from shewanella sp. w3-18-1 in complex with selenomethionine. 0.8247 7 331
3ppc-assembly2.cif.gz_B crystal structure of the candida albicans methionine synthase by surface entropy reduction, tyrosine variant with zinc 0.8217 5 334
4l61-assembly1.cif.gz_A crystal structure of the candida albicans methionine synthase in complex with methionine 0.817 5 334
3l7r-assembly1.cif.gz_A crystal structure of mete from streptococcus mutans 0.8097 5 331
ID Description Score Start End Superfamily
af_K7MME4_84_171_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8732 255 331 3.20.20.210
af_K7KK03_1_110_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.861 225 334 3.20.20.210
2nq5A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8425 5 334 3.20.20.210
4l61A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8272 3 334 3.20.20.210
af_Q58868_1_307_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.799 7 331 3.20.20.210
ID Description Score Start End GO Terms
AF-A0A2V5WGA0-F1-model_v4 Methionine synthase 0.9796 108 203
AF-A0A3M1G665-F1-model_v4 Methionine synthase 0.975 243 337 GO:0003871
GO:0008270
GO:0009086
AF-A0A258B4A7-F1-model_v4 Methionine synthase 0.9723 7 334 GO:0003871
GO:0008270
GO:0009086
AF-A0A2A2RKR3-F1-model_v4 Methionine synthase 0.9675 1 334 GO:0003871
GO:0008270
GO:0009086
AF-A0A836UCJ4-F1-model_v4 Uncharacterized protein 0.9657 74 174

Map