F273837
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 179 | 138 | 178 | 204 |
Family's Representative Sequence
| Representative Sequence | 3300013307|Ga0157372_10066606|Ga0157372_100666062 |
| Length | 232 |
| Sequence | VLEHRRSGHPSADCRSVAWHPDEVNAEPSAEVESPGYRRSARTPRGEARREELLIRVTDDLAAHGLVDFSLRRAARAAGTTHKVLLYHFENVDDLLAQAMFRLRERRIDNALTAVRVRDHPTLAGRVRAIWPILAADETGLRVIDQAIGLVMYDPARYADLGRQTATQYLPGLLALCPDGWSEQRKFEVAEMIMAVMRGFLMDWRTTGEAARIEAGMEALARALEREEAQPA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2995463766 | Streptacidiphilus fuscans NEAU-YB345 | Isolate | Unclassified |
| 2 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 3 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 4 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 5 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 6 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 7 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 9 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 22 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 23 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 26 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 27 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 28 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 29 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 30 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 31 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 32 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 34 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 36 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 48 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 49 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 69 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 70 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 71 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 72 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 73 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 74 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 75 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 76 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 77 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 78 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 79 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 80 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 81 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 82 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 83 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 84 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 85 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 86 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 87 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 88 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 89 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 104 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 105 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 106 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 107 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 109 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 110 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 111 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 112 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 138 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.88 |
| Metatranscriptomes | 0.56 |
| Isolates | 0.56 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 5.59 |
| Rhizosphere | 88.27 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 6.15 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10033396 | 3300001979 | Bacteria | 1634 |
| 2 | JGI24739J22299_10014194 | 3300001989 | Bacteria | 2899 |
| 3 | JGI24737J22298_10008828 | 3300001990 | Bacteria | 3365 |
| 4 | JGI24735J21928_10099038 | 3300002067 | Bacteria | 837 |
| 5 | rootH2_10028436 | 3300003320 | Bacteria | 3994 |
| 6 | Ga0070658_10257339 | 3300005327 | Bacteria | 1482 |
| 7 | Ga0070683_100003918 | 3300005329 | Bacteria | 12165 |
| 8 | Ga0070682_100571092 | 3300005337 | Bacteria | 888 |
| 9 | Ga0070668_100290884 | 3300005347 | Bacteria | 1367 |
| 10 | Ga0070667_100257619 | 3300005367 | Bacteria | 1561 |
| 11 | Ga0070709_10204526 | 3300005434 | Bacteria | 1400 |
| 12 | Ga0070714_100981231 | 3300005435 | Bacteria | 822 |
| 13 | Ga0070713_100009889 | 3300005436 | Bacteria | 6863 |
| 14 | Ga0070713_100034243 | 3300005436 | Bacteria | 4078 |
| 15 | Ga0070710_10596959 | 3300005437 | Bacteria | 768 |
| 16 | Ga0070711_100392851 | 3300005439 | Bacteria | 1124 |
| 17 | Ga0070708_100409191 | 3300005445 | Bacteria | 1279 |
| 18 | Ga0070663_100006488 | 3300005455 | Bacteria | 7043 |
| 19 | Ga0070678_100672650 | 3300005456 | Bacteria | 930 |
| 20 | Ga0070699_100596361 | 3300005518 | Bacteria | 1007 |
| 21 | Ga0070679_100009833 | 3300005530 | Bacteria | 9049 |
| 22 | Ga0068853_100748510 | 3300005539 | Bacteria | 934 |
| 23 | Ga0070693_100295167 | 3300005547 | Bacteria | 1090 |
| 24 | Ga0070665_100230790 | 3300005548 | Unclassified | 1851 |
| 25 | Ga0068855_100035631 | 3300005563 | Bacteria | 5927 |
| 26 | Ga0068855_101100010 | 3300005563 | Bacteria | 831 |
| 27 | Ga0068857_100104974 | 3300005577 | Bacteria | 2537 |
| 28 | Ga0068857_100307054 | 3300005577 | Bacteria | 1463 |
| 29 | Ga0068857_100481485 | 3300005577 | Bacteria | 1163 |
| 30 | Ga0068857_100672418 | 3300005577 | Bacteria | 982 |
| 31 | Ga0068854_100027668 | 3300005578 | Bacteria | 3911 |
| 32 | Ga0068856_100188370 | 3300005614 | Bacteria | 2077 |
| 33 | Ga0068852_100030931 | 3300005616 | Bacteria | 4412 |
| 34 | Ga0068852_100436517 | 3300005616 | Unclassified | 1294 |
| 35 | Ga0068852_100448216 | 3300005616 | Bacteria | 1277 |
| 36 | Ga0068859_100950524 | 3300005617 | Bacteria | 943 |
| 37 | Ga0081455_10232462 | 3300005937 | Bacteria | 1360 |
| 38 | Ga0070717_10071597 | 3300006028 | Bacteria | 2893 |
| 39 | Ga0070712_100204846 | 3300006175 | Bacteria | 1552 |
| 40 | Ga0097620_100950429 | 3300006931 | Bacteria | 943 |
| 41 | Ga0099794_10206525 | 3300007265 | Bacteria | 1007 |
| 42 | Ga0105240_11069808 | 3300009093 | Bacteria | 860 |
| 43 | Ga0105245_10047282 | 3300009098 | Bacteria | 3846 |
| 44 | Ga0105241_10003731 | 3300009174 | Bacteria | 11314 |
| 45 | Ga0105237_10065573 | 3300009545 | Bacteria | 3627 |
| 46 | Ga0105238_10033384 | 3300009551 | Bacteria | 5238 |
| 47 | Ga0105238_10384102 | 3300009551 | Bacteria | 1396 |
| 48 | Ga0105239_10029768 | 3300010375 | Bacteria | 6003 |
| 49 | Ga0157370_10674494 | 3300013104 | Unclassified | 944 |
| 50 | Ga0157369_10673374 | 3300013105 | Unclassified | 1066 |
| 51 | Ga0157369_11028607 | 3300013105 | Bacteria | 843 |
| 52 | Ga0157374_10056082 | 3300013296 | Bacteria | 3678 |
| 53 | Ga0157372_10066606 | 3300013307 | Bacteria | 4046 |
| 54 | Ga0157372_10066701 | 3300013307 | Bacteria | 4043 |
| 55 | Ga0157372_10708674 | 3300013307 | Unclassified | 1171 |
| 56 | Ga0163163_10050724 | 3300014325 | Bacteria | 4087 |
| 57 | Ga0163163_10667876 | 3300014325 | Unclassified | 1103 |
| 58 | Ga0213875_10004143 | 3300021388 | Bacteria | 8031 |
| 59 | Ga0224712_10254418 | 3300022467 | Bacteria | 812 |
| 60 | Ga0207647_10012786 | 3300025904 | Bacteria | 5832 |
| 61 | Ga0207647_10015699 | 3300025904 | Bacteria | 5186 |
| 62 | Ga0207647_10023393 | 3300025904 | Bacteria | 4086 |
| 63 | Ga0207699_10086286 | 3300025906 | Bacteria | 1960 |
| 64 | Ga0207699_10157040 | 3300025906 | Bacteria | 1511 |
| 65 | Ga0207684_10219508 | 3300025910 | Bacteria | 1641 |
| 66 | Ga0207695_10026614 | 3300025913 | Bacteria | 6455 |
| 67 | Ga0207671_10001878 | 3300025914 | Bacteria | 23349 |
| 68 | Ga0207663_10119072 | 3300025916 | Bacteria | 1805 |
| 69 | Ga0207663_10608784 | 3300025916 | Unclassified | 859 |
| 70 | Ga0207652_10614400 | 3300025921 | Bacteria | 974 |
| 71 | Ga0207694_10002815 | 3300025924 | Bacteria | 14036 |
| 72 | Ga0207694_10926807 | 3300025924 | Bacteria | 737 |
| 73 | Ga0207687_10058841 | 3300025927 | Bacteria | 2705 |
| 74 | Ga0207664_10032795 | 3300025929 | Bacteria | 3984 |
| 75 | Ga0207664_10641085 | 3300025929 | Bacteria | 955 |
| 76 | Ga0207711_11032281 | 3300025941 | Bacteria | 762 |
| 77 | Ga0207661_10011694 | 3300025944 | Bacteria | 6370 |
| 78 | Ga0207668_10094600 | 3300025972 | Bacteria | 2203 |
| 79 | Ga0207640_10067115 | 3300025981 | Bacteria | 2399 |
| 80 | Ga0207658_10161495 | 3300025986 | Bacteria | 1837 |
| 81 | Ga0207639_10039817 | 3300026041 | Bacteria | 3504 |
| 82 | Ga0207639_10305712 | 3300026041 | Bacteria | 1407 |
| 83 | Ga0207678_10043289 | 3300026067 | Bacteria | 3896 |
| 84 | Ga0207702_10074690 | 3300026078 | Bacteria | 2926 |
| 85 | Ga0207674_10319596 | 3300026116 | Bacteria | 1502 |
| 86 | Ga0207674_10691156 | 3300026116 | Bacteria | 985 |
| 87 | Ga0307515_10107385 | 3300028794 | Bacteria | 3300 |
| 88 | Ga0307513_10510604 | 3300031456 | Bacteria | 918 |
| 89 | Ga0307513_10576444 | 3300031456 | Bacteria | 836 |
| 90 | Ga0307508_10087425 | 3300031616 | Bacteria | 2701 |
| 91 | Ga0307508_10177327 | 3300031616 | Bacteria | 1734 |
| 92 | Ga0307518_10063795 | 3300031838 | Bacteria | 2674 |
| 93 | Ga0307406_10149834 | 3300031901 | Bacteria | 1663 |
| 94 | Ga0373951_0000387 | 3300035091 | Bacteria | 13110 |
| 95 | Ga0373931_0352804 | 3300035691 | Bacteria | 921 |
| 96 | Ga0373927_0041357 | 3300035695 | Bacteria | 2990 |
| 97 | Ga0436364_1026390 | 3300037853 | Bacteria | 7729 |
| 98 | Ga0436362_1013921 | 3300039453 | Bacteria | 1293 |
| 99 | Ga0466969_0112553 | 3300044656 | Bacteria | 1273 |
| 100 | Ga0466972_0101301 | 3300044658 | Bacteria | 1363 |
| 101 | Ga0466965_0131098 | 3300044683 | Bacteria | 1300 |
| 102 | Ga0466966_0092338 | 3300044684 | Bacteria | 1878 |
| 103 | Ga0466966_0261267 | 3300044684 | Bacteria | 1042 |
| 104 | Ga0466961_0006177 | 3300044693 | Bacteria | 7605 |
| 105 | Ga0466961_0060939 | 3300044693 | Bacteria | 2399 |
| 106 | Ga0466961_0313354 | 3300044693 | Bacteria | 957 |
| 107 | Ga0466963_0120012 | 3300044694 | Bacteria | 1809 |
| 108 | Ga0466963_0435438 | 3300044694 | Unclassified | 925 |
| 109 | Ga0466963_0450002 | 3300044694 | Bacteria | 909 |
| 110 | Ga0466971_0109643 | 3300044719 | Unclassified | 1273 |
| 111 | Ga0466970_0005746 | 3300044765 | Bacteria | 6166 |
| 112 | Ga0466970_0170569 | 3300044765 | Bacteria | 1206 |
| 113 | Ga0466957_0433118 | 3300044842 | Unclassified | 904 |
| 114 | Ga0466957_0442364 | 3300044842 | Bacteria | 895 |
| 115 | Ga0466959_0018548 | 3300045049 | Bacteria | 5111 |
| 116 | Ga0466967_0352875 | 3300045976 | Bacteria | 1424 |
| 117 | Ga0495592_0093363 | 3300046454 | Bacteria | 2155 |
| 118 | Ga0495603_0002018 | 3300046455 | Bacteria | 11949 |
| 119 | Ga0495603_0016687 | 3300046455 | Bacteria | 4442 |
| 120 | Ga0495629_0000882 | 3300046459 | Bacteria | 24204 |
| 121 | Ga0495629_0380838 | 3300046459 | Bacteria | 960 |
| 122 | Ga0495651_0003977 | 3300046462 | Bacteria | 11299 |
| 123 | Ga0495651_0370077 | 3300046462 | Bacteria | 942 |
| 124 | Ga0495585_0034786 | 3300046492 | Bacteria | 2848 |
| 125 | Ga0495628_0080365 | 3300046516 | Bacteria | 2534 |
| 126 | Ga0495652_0002743 | 3300046529 | Bacteria | 17828 |
| 127 | Ga0495645_0003335 | 3300046543 | Bacteria | 10882 |
| 128 | Ga0495645_0086638 | 3300046543 | Bacteria | 2241 |
| 129 | Ga0495623_0092213 | 3300046679 | Bacteria | 1857 |
| 130 | Ga0495613_0001016 | 3300046689 | Bacteria | 21322 |
| 131 | Ga0495600_0011163 | 3300046809 | Bacteria | 5593 |
| 132 | Ga0495604_0090318 | 3300047317 | Bacteria | 2275 |
| 133 | Ga0495604_0306084 | 3300047317 | Bacteria | 1066 |
| 134 | Ga0495676_0005845 | 3300047321 | Bacteria | 11297 |
| 135 | Ga0495614_0001828 | 3300048089 | Bacteria | 9318 |
| 136 | Ga0496100_0405787 | 3300048903 | Bacteria | 1039 |
| 137 | Ga0496102_0001351 | 3300048905 | Bacteria | 21958 |
| 138 | Ga0496102_0988591 | 3300048905 | Bacteria | 762 |
| 139 | Ga0496104_0509311 | 3300048907 | Bacteria | 1115 |
| 140 | Ga0496105_0399496 | 3300048908 | Bacteria | 1091 |
| 141 | Ga0496108_0599748 | 3300048911 | Unclassified | 960 |
| 142 | Ga0496109_0074569 | 3300048912 | Bacteria | 3119 |
| 143 | Ga0496110_0027399 | 3300048913 | Bacteria | 4885 |
| 144 | Ga0496112_0018673 | 3300048915 | Bacteria | 6535 |
| 145 | Ga0496112_0171832 | 3300048915 | Unclassified | 2132 |
| 146 | Ga0496126_0000013 | 3300048929 | Bacteria | 690046 |
| 147 | Ga0501031_0000868 | 3300049568 | Bacteria | 18195 |
| 148 | Ga0501032_0006313 | 3300049569 | Bacteria | 8731 |
| 149 | Ga0501033_0001897 | 3300049570 | Bacteria | 18179 |
| 150 | Ga0501034_0002121 | 3300049571 | Bacteria | 24658 |
| 151 | Ga0501036_0001217 | 3300049572 | Bacteria | 19673 |
| 152 | Ga0501037_0000750 | 3300049573 | Bacteria | 24514 |
| 153 | Ga0501037_0069753 | 3300049573 | Bacteria | 2558 |
| 154 | Ga0501038_0000873 | 3300049574 | Bacteria | 26691 |
| 155 | Ga0501039_0000620 | 3300049575 | Bacteria | 25663 |
| 156 | Ga0501042_0040593 | 3300049578 | Bacteria | 3308 |
| 157 | Ga0501043_0000111 | 3300049579 | Bacteria | 76773 |
| 158 | Ga0501046_0000307 | 3300049580 | Bacteria | 49550 |
| 159 | Ga0501047_0000254 | 3300049581 | Bacteria | 63304 |
| 160 | Ga0501047_0000289 | 3300049581 | Bacteria | 57793 |
| 161 | Ga0501047_0027037 | 3300049581 | Bacteria | 5526 |
| 162 | Ga0501048_0000376 | 3300049582 | Bacteria | 30941 |
| 163 | Ga0501067_0126311 | 3300049583 | Bacteria | 1423 |
| 164 | Ga0501069_0002364 | 3300049585 | Bacteria | 9563 |
| 165 | Ga0501070_0000909 | 3300049586 | Bacteria | 26947 |
| 166 | Ga0501073_0031611 | 3300049589 | Bacteria | 3776 |
| 167 | Ga0501074_0000374 | 3300049590 | Bacteria | 26435 |
| 168 | Ga0501080_0000244 | 3300049742 | Bacteria | 40757 |
| 169 | Ga0501083_0003478 | 3300049744 | Bacteria | 11016 |
| 170 | Ga0501035_0000498 | 3300049822 | Bacteria | 44178 |
| 171 | Ga0501044_0168281 | 3300049823 | Bacteria | 2164 |
| 172 | Ga0501044_0256479 | 3300049823 | Bacteria | 1688 |
| 173 | Ga0501044_0771629 | 3300049823 | Bacteria | 842 |
| 174 | Ga0495601_0382045 | 3300053077 | Bacteria | 914 |
| 175 | Ga0495595_0187234 | 3300053084 | Bacteria | 1028 |
| 176 | Ga0495619_0042340 | 3300053085 | Bacteria | 2982 |
| 177 | Ga0501084_0000705 | 3300054114 | Bacteria | 25579 |
| 178 | Ga0466962_0025613 | 3300061719 | Bacteria | 2832 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300013104 | Ga0157370_10674494 | Ga0157370_106744942 | 153 |
| 2 | 3300049823 | Ga0501044_0771629 | Ga0501044_0771629_91_609 | 154 |
| 3 | 3300044694 | Ga0466963_0435438 | Ga0466963_0435438_331_855 | 156 |
| 4 | 3300044719 | Ga0466971_0109643 | Ga0466971_0109643_733_1257 | 156 |
| 5 | 3300048911 | Ga0496108_0599748 | Ga0496108_0599748_393_926 | 159 |
| 6 | 3300044842 | Ga0466957_0442364 | Ga0466957_0442364_314_868 | 161 |
| 7 | 3300005614 | Ga0068856_100188370 | Ga0068856_1001883702 | 171 |
| 8 | 3300005518 | Ga0070699_100596361 | Ga0070699_1005963612 | 174 |
| 9 | 3300025910 | Ga0207684_10219508 | Ga0207684_102195082 | 174 |
| 10 | 3300048905 | Ga0496102_0001351 | Ga0496102_0001351_12593_13312 | 175 |
| 11 | 3300005577 | Ga0068857_100481485 | Ga0068857_1004814852 | 176 |
| 12 | 3300044658 | Ga0466972_0101301 | Ga0466972_0101301_221_922 | 176 |
| 13 | 3300005329 | Ga0070683_100003918 | Ga0070683_10000391810 | 179 |
| 14 | 3300005577 | Ga0068857_100307054 | Ga0068857_1003070542 | 179 |
| 15 | 3300025944 | Ga0207661_10011694 | Ga0207661_100116945 | 179 |
| 16 | 3300026041 | Ga0207639_10039817 | Ga0207639_100398172 | 179 |
| 17 | 3300026116 | Ga0207674_10319596 | Ga0207674_103195962 | 179 |
| 18 | 3300005455 | Ga0070663_100006488 | Ga0070663_1000064887 | 180 |
| 19 | 3300005563 | Ga0068855_100035631 | Ga0068855_1000356313 | 180 |
| 20 | 3300005578 | Ga0068854_100027668 | Ga0068854_1000276682 | 180 |
| 21 | 3300005616 | Ga0068852_100030931 | Ga0068852_1000309313 | 180 |
| 22 | 3300009174 | Ga0105241_10003731 | Ga0105241_100037319 | 180 |
| 23 | 3300009545 | Ga0105237_10065573 | Ga0105237_100655732 | 180 |
| 24 | 3300009551 | Ga0105238_10033384 | Ga0105238_100333844 | 180 |
| 25 | 3300010375 | Ga0105239_10029768 | Ga0105239_100297682 | 180 |
| 26 | 3300013296 | Ga0157374_10056082 | Ga0157374_100560822 | 180 |
| 27 | 3300025904 | Ga0207647_10012786 | Ga0207647_100127862 | 180 |
| 28 | 3300025913 | Ga0207695_10026614 | Ga0207695_100266142 | 180 |
| 29 | 3300025914 | Ga0207671_10001878 | Ga0207671_1000187813 | 180 |
| 30 | 3300025921 | Ga0207652_10614400 | Ga0207652_106144001 | 180 |
| 31 | 3300025924 | Ga0207694_10002815 | Ga0207694_100028152 | 180 |
| 32 | 3300025981 | Ga0207640_10067115 | Ga0207640_100671152 | 180 |
| 33 | 3300026067 | Ga0207678_10043289 | Ga0207678_100432892 | 180 |
| 34 | 3300026078 | Ga0207702_10074690 | Ga0207702_100746904 | 180 |
| 35 | 3300035091 | Ga0373951_0000387 | Ga0373951_0000387_7035_7634 | 180 |
| 36 | 3300044684 | Ga0466966_0261267 | Ga0466966_0261267_61_654 | 180 |
| 37 | 3300044693 | Ga0466961_0060939 | Ga0466961_0060939_151_744 | 180 |
| 38 | 3300005937 | Ga0081455_10232462 | Ga0081455_102324622 | 181 |
| 39 | 3300031901 | Ga0307406_10149834 | Ga0307406_101498341 | 181 |
| 40 | 3300044694 | Ga0466963_0120012 | Ga0466963_0120012_973_1578 | 181 |
| 41 | 3300046492 | Ga0495585_0034786 | Ga0495585_0034786_1741_2343 | 181 |
| 42 | 3300005456 | Ga0070678_100672650 | Ga0070678_1006726502 | 182 |
| 43 | 3300005563 | Ga0068855_101100010 | Ga0068855_1011000102 | 182 |
| 44 | 3300005616 | Ga0068852_100448216 | Ga0068852_1004482162 | 182 |
| 45 | 3300049581 | Ga0501047_0027037 | Ga0501047_0027037_3833_4606 | 182 |
| 46 | 3300031456 | Ga0307513_10510604 | Ga0307513_105106042 | 183 |
| 47 | 3300031616 | Ga0307508_10087425 | Ga0307508_100874252 | 183 |
| 48 | 3300044693 | Ga0466961_0313354 | Ga0466961_0313354_243_863 | 183 |
| 49 | 3300005436 | Ga0070713_100009889 | Ga0070713_1000098895 | 184 |
| 50 | 3300025906 | Ga0207699_10157040 | Ga0207699_101570401 | 184 |
| 51 | 3300025916 | Ga0207663_10608784 | Ga0207663_106087841 | 184 |
| 52 | 3300025929 | Ga0207664_10032795 | Ga0207664_100327954 | 184 |
| 53 | 3300039453 | Ga0436362_1013921 | Ga0436362_1013921_343_948 | 184 |
| 54 | 3300046455 | Ga0495603_0016687 | Ga0495603_0016687_1044_1742 | 184 |
| 55 | 3300046689 | Ga0495613_0001016 | Ga0495613_0001016_919_1617 | 184 |
| 56 | 3300047321 | Ga0495676_0005845 | Ga0495676_0005845_868_1566 | 184 |
| 57 | 3300048089 | Ga0495614_0001828 | Ga0495614_0001828_7764_8462 | 184 |
| 58 | 3300035691 | Ga0373931_0352804 | Ga0373931_0352804_168_776 | 185 |
| 59 | 3300001989 | JGI24739J22299_10014194 | JGI24739J22299_100141941 | 186 |
| 60 | 3300001990 | JGI24737J22298_10008828 | JGI24737J22298_100088282 | 186 |
| 61 | 3300002067 | JGI24735J21928_10099038 | JGI24735J21928_100990381 | 186 |
| 62 | 3300005367 | Ga0070667_100257619 | Ga0070667_1002576192 | 186 |
| 63 | 3300005539 | Ga0068853_100748510 | Ga0068853_1007485101 | 186 |
| 64 | 3300005577 | Ga0068857_100104974 | Ga0068857_1001049743 | 186 |
| 65 | 3300005617 | Ga0068859_100950524 | Ga0068859_1009505242 | 186 |
| 66 | 3300006931 | Ga0097620_100950429 | Ga0097620_1009504292 | 186 |
| 67 | 3300013105 | Ga0157369_11028607 | Ga0157369_110286072 | 186 |
| 68 | 3300013307 | Ga0157372_10066701 | Ga0157372_100667012 | 186 |
| 69 | 3300025904 | Ga0207647_10023393 | Ga0207647_100233933 | 186 |
| 70 | 3300025986 | Ga0207658_10161495 | Ga0207658_101614952 | 186 |
| 71 | 3300026041 | Ga0207639_10305712 | Ga0207639_103057122 | 186 |
| 72 | 3300031456 | Ga0307513_10576444 | Ga0307513_105764442 | 186 |
| 73 | 3300044693 | Ga0466961_0006177 | Ga0466961_0006177_3320_3964 | 186 |
| 74 | 3300044765 | Ga0466970_0170569 | Ga0466970_0170569_28_651 | 186 |
| 75 | iso_pu_bacteria | 2995463766 | 2995470224 | 186 |
| 76 | 3300005347 | Ga0070668_100290884 | Ga0070668_1002908842 | 187 |
| 77 | 3300005548 | Ga0070665_100230790 | Ga0070665_1002307902 | 187 |
| 78 | 3300009551 | Ga0105238_10384102 | Ga0105238_103841021 | 187 |
| 79 | 3300014325 | Ga0163163_10050724 | Ga0163163_100507242 | 187 |
| 80 | 3300014325 | Ga0163163_10667876 | Ga0163163_106678762 | 187 |
| 81 | 3300021388 | Ga0213875_10004143 | Ga0213875_1000414310 | 187 |
| 82 | 3300025924 | Ga0207694_10926807 | Ga0207694_109268071 | 187 |
| 83 | 3300025941 | Ga0207711_11032281 | Ga0207711_110322811 | 187 |
| 84 | 3300025972 | Ga0207668_10094600 | Ga0207668_100946003 | 187 |
| 85 | 3300031838 | Ga0307518_10063795 | Ga0307518_100637952 | 187 |
| 86 | 3300037853 | Ga0436364_1026390 | Ga0436364_1026390_5309_5929 | 187 |
| 87 | 3300044656 | Ga0466969_0112553 | Ga0466969_0112553_272_895 | 187 |
| 88 | 3300046543 | Ga0495645_0086638 | Ga0495645_0086638_1036_1716 | 187 |
| 89 | 3300048908 | Ga0496105_0399496 | Ga0496105_0399496_79_699 | 187 |
| 90 | 3300048915 | Ga0496112_0018673 | Ga0496112_0018673_4535_5155 | 187 |
| 91 | 3300048915 | Ga0496112_0171832 | Ga0496112_0171832_232_852 | 187 |
| 92 | 3300005434 | Ga0070709_10204526 | Ga0070709_102045261 | 188 |
| 93 | 3300005435 | Ga0070714_100981231 | Ga0070714_1009812311 | 188 |
| 94 | 3300005436 | Ga0070713_100034243 | Ga0070713_1000342434 | 188 |
| 95 | 3300005437 | Ga0070710_10596959 | Ga0070710_105969591 | 188 |
| 96 | 3300005439 | Ga0070711_100392851 | Ga0070711_1003928511 | 188 |
| 97 | 3300006175 | Ga0070712_100204846 | Ga0070712_1002048462 | 188 |
| 98 | 3300009093 | Ga0105240_11069808 | Ga0105240_110698081 | 188 |
| 99 | 3300022467 | Ga0224712_10254418 | Ga0224712_102544181 | 188 |
| 100 | 3300025906 | Ga0207699_10086286 | Ga0207699_100862862 | 188 |
| 101 | 3300025916 | Ga0207663_10119072 | Ga0207663_101190722 | 188 |
| 102 | 3300025929 | Ga0207664_10641085 | Ga0207664_106410851 | 188 |
| 103 | 3300028794 | Ga0307515_10107385 | Ga0307515_101073852 | 188 |
| 104 | 3300035695 | Ga0373927_0041357 | Ga0373927_0041357_520_1155 | 188 |
| 105 | 3300044683 | Ga0466965_0131098 | Ga0466965_0131098_600_1226 | 188 |
| 106 | 3300044684 | Ga0466966_0092338 | Ga0466966_0092338_146_778 | 188 |
| 107 | 3300044694 | Ga0466963_0450002 | Ga0466963_0450002_150_830 | 188 |
| 108 | 3300044842 | Ga0466957_0433118 | Ga0466957_0433118_64_690 | 188 |
| 109 | 3300045976 | Ga0466967_0352875 | Ga0466967_0352875_398_1039 | 188 |
| 110 | 3300046454 | Ga0495592_0093363 | Ga0495592_0093363_311_946 | 188 |
| 111 | 3300046455 | Ga0495603_0002018 | Ga0495603_0002018_6795_7439 | 188 |
| 112 | 3300046459 | Ga0495629_0380838 | Ga0495629_0380838_79_708 | 188 |
| 113 | 3300046462 | Ga0495651_0003977 | Ga0495651_0003977_636_1271 | 188 |
| 114 | 3300046516 | Ga0495628_0080365 | Ga0495628_0080365_856_1491 | 188 |
| 115 | 3300046529 | Ga0495652_0002743 | Ga0495652_0002743_4828_5463 | 188 |
| 116 | 3300046543 | Ga0495645_0003335 | Ga0495645_0003335_10203_10838 | 188 |
| 117 | 3300046809 | Ga0495600_0011163 | Ga0495600_0011163_1366_2001 | 188 |
| 118 | 3300047317 | Ga0495604_0306084 | Ga0495604_0306084_254_889 | 188 |
| 119 | 3300048929 | Ga0496126_0000013 | Ga0496126_0000013_468635_469261 | 188 |
| 120 | 3300049568 | Ga0501031_0000868 | Ga0501031_0000868_14227_14841 | 188 |
| 121 | 3300049569 | Ga0501032_0006313 | Ga0501032_0006313_7807_8421 | 188 |
| 122 | 3300049570 | Ga0501033_0001897 | Ga0501033_0001897_7655_8269 | 188 |
| 123 | 3300049571 | Ga0501034_0002121 | Ga0501034_0002121_19643_20257 | 188 |
| 124 | 3300049572 | Ga0501036_0001217 | Ga0501036_0001217_15391_16005 | 188 |
| 125 | 3300049573 | Ga0501037_0000750 | Ga0501037_0000750_1368_1982 | 188 |
| 126 | 3300049574 | Ga0501038_0000873 | Ga0501038_0000873_7741_8355 | 188 |
| 127 | 3300049575 | Ga0501039_0000620 | Ga0501039_0000620_17377_17991 | 188 |
| 128 | 3300049579 | Ga0501043_0000111 | Ga0501043_0000111_36168_36782 | 188 |
| 129 | 3300049580 | Ga0501046_0000307 | Ga0501046_0000307_19886_20500 | 188 |
| 130 | 3300049581 | Ga0501047_0000289 | Ga0501047_0000289_39856_40470 | 188 |
| 131 | 3300049582 | Ga0501048_0000376 | Ga0501048_0000376_22805_23419 | 188 |
| 132 | 3300049583 | Ga0501067_0126311 | Ga0501067_0126311_438_1052 | 188 |
| 133 | 3300049585 | Ga0501069_0002364 | Ga0501069_0002364_4685_5299 | 188 |
| 134 | 3300049586 | Ga0501070_0000909 | Ga0501070_0000909_24410_25024 | 188 |
| 135 | 3300049589 | Ga0501073_0031611 | Ga0501073_0031611_392_1006 | 188 |
| 136 | 3300049590 | Ga0501074_0000374 | Ga0501074_0000374_18381_18995 | 188 |
| 137 | 3300049742 | Ga0501080_0000244 | Ga0501080_0000244_38189_38803 | 188 |
| 138 | 3300049744 | Ga0501083_0003478 | Ga0501083_0003478_4401_5015 | 188 |
| 139 | 3300049822 | Ga0501035_0000498 | Ga0501035_0000498_39523_40137 | 188 |
| 140 | 3300049823 | Ga0501044_0168281 | Ga0501044_0168281_1240_1854 | 188 |
| 141 | 3300054114 | Ga0501084_0000705 | Ga0501084_0000705_7537_8151 | 188 |
| 142 | 3300061719 | Ga0466962_0025613 | Ga0466962_0025613_1691_2317 | 188 |
| 143 | 3300005616 | Ga0068852_100436517 | Ga0068852_1004365172 | 189 |
| 144 | 3300013105 | Ga0157369_10673374 | Ga0157369_106733742 | 189 |
| 145 | 3300013307 | Ga0157372_10708674 | Ga0157372_107086742 | 189 |
| 146 | 3300031616 | Ga0307508_10177327 | Ga0307508_101773273 | 189 |
| 147 | 3300046462 | Ga0495651_0370077 | Ga0495651_0370077_244_882 | 189 |
| 148 | 3300049573 | Ga0501037_0069753 | Ga0501037_0069753_1309_1962 | 189 |
| 149 | 3300049578 | Ga0501042_0040593 | Ga0501042_0040593_2379_3032 | 189 |
| 150 | 3300049581 | Ga0501047_0000254 | Ga0501047_0000254_16546_17199 | 189 |
| 151 | 3300049823 | Ga0501044_0256479 | Ga0501044_0256479_240_893 | 189 |
| 152 | 3300003320 | rootH2_10028436 | rootH2_100284363 | 190 |
| 153 | 3300005445 | Ga0070708_100409191 | Ga0070708_1004091911 | 190 |
| 154 | 3300005547 | Ga0070693_100295167 | Ga0070693_1002951672 | 190 |
| 155 | 3300005577 | Ga0068857_100672418 | Ga0068857_1006724181 | 190 |
| 156 | 3300007265 | Ga0099794_10206525 | Ga0099794_102065252 | 190 |
| 157 | 3300009098 | Ga0105245_10047282 | Ga0105245_100472823 | 190 |
| 158 | 3300013307 | Ga0157372_10066606 | Ga0157372_100666062 | 190 |
| 159 | 3300025927 | Ga0207687_10058841 | Ga0207687_100588413 | 190 |
| 160 | 3300026116 | Ga0207674_10691156 | Ga0207674_106911561 | 190 |
| 161 | 3300044765 | Ga0466970_0005746 | Ga0466970_0005746_830_1462 | 190 |
| 162 | 3300045049 | Ga0466959_0018548 | Ga0466959_0018548_4037_4669 | 190 |
| 163 | 3300046459 | Ga0495629_0000882 | Ga0495629_0000882_1110_1751 | 190 |
| 164 | 3300046679 | Ga0495623_0092213 | Ga0495623_0092213_572_1222 | 190 |
| 165 | 3300047317 | Ga0495604_0090318 | Ga0495604_0090318_1560_2210 | 190 |
| 166 | 3300048903 | Ga0496100_0405787 | Ga0496100_0405787_23_652 | 190 |
| 167 | 3300048905 | Ga0496102_0988591 | Ga0496102_0988591_86_715 | 190 |
| 168 | 3300048907 | Ga0496104_0509311 | Ga0496104_0509311_193_891 | 190 |
| 169 | 3300048912 | Ga0496109_0074569 | Ga0496109_0074569_1620_2318 | 190 |
| 170 | 3300048913 | Ga0496110_0027399 | Ga0496110_0027399_2437_3066 | 190 |
| 171 | 3300053077 | Ga0495601_0382045 | Ga0495601_0382045_85_705 | 190 |
| 172 | 3300053084 | Ga0495595_0187234 | Ga0495595_0187234_116_793 | 190 |
| 173 | 3300053085 | Ga0495619_0042340 | Ga0495619_0042340_2009_2629 | 190 |
| 174 | 3300006028 | Ga0070717_10071597 | Ga0070717_100715972 | 191 |
| 175 | 3300001979 | JGI24740J21852_10033396 | JGI24740J21852_100333961 | 194 |
| 176 | 3300005327 | Ga0070658_10257339 | Ga0070658_102573393 | 194 |
| 177 | 3300005337 | Ga0070682_100571092 | Ga0070682_1005710921 | 194 |
| 178 | 3300005530 | Ga0070679_100009833 | Ga0070679_1000098334 | 194 |
| 179 | 3300025904 | Ga0207647_10015699 | Ga0207647_100156994 | 194 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2dg8-assembly1.cif.gz_D | crystal structure of the putative trasncriptional regulator sco7518 from streptomyces coelicolor a3(2) | 0.7097 | 25 | 169 |
| 3bhq-assembly1.cif.gz_B | crystal structure of a putative tetr-family transcriptional regulator (mlr_4833) from mesorhizobium loti maff303099 at 1.54 a resolution | 0.708 | 19 | 150 |
| 5icj-assembly1.cif.gz_B | crystal structure of the mycobacterium tuberculosis transcriptional repressor ethr2 in complex with bdm41420 | 0.7069 | 23 | 170 |
| 3bti-assembly1.cif.gz_A | crystal structure of qacr(e58q) bound to berberine | 0.6994 | 26 | 173 |
| 1qvu-assembly1.cif.gz_A | crystal structure of the multidrug binding transcriptional repressor qacr bound to two drugs: ethidium and proflavine | 0.6981 | 26 | 173 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2ibdA01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.9058 | 23 | 65 | 1.10.10.60 |
| 5gpcC01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.8673 | 25 | 67 | 1.10.10.60 |
| 2raeA01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.8658 | 26 | 65 | 1.10.10.60 |
| 1qpiA01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.8648 | 26 | 78 | 1.10.10.60 |
| 3whcE01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.8629 | 23 | 67 | 1.10.10.60 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1W9K178-F1-model_v4 | deleted | 0.7937 | 23 | 184 |
|
| AF-A0A7V0SEX3-F1-model_v4 | TetR/AcrR family transcriptional regulator | 0.7918 | 19 | 150 |
GO:0003677
|
| AF-A0A258RLZ5-F1-model_v4 | HTH tetR-type domain-containing protein | 0.7778 | 23 | 187 |
GO:0003677
|
| AF-A0A3S0GXQ5-F1-model_v4 | TetR family transcriptional regulator | 0.7758 | 19 | 150 |
GO:0000976
GO:0003700 |
| AF-A0A1H8JH61-F1-model_v4 | Transcriptional regulator, TetR family | 0.7732 | 1 | 188 |
|
Predicted Structure (AlphaFold2)
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