F273309

General Info

Members Datasets Scaffolds Average Seq Length
179 136 175 387

Family's Representative Sequence

Representative Sequence 3300005355|Ga0070671_100052003|Ga0070671_1000520032
Length 409
Sequence MKKRTWIYVGTAGVGAAALLAWAFAPRPVEVEVAQVTQGHFETTVDEDGKTRLRDRYVISAPLSGRLNRIVLREGDAVTANAVVATLTPVLPAMLDDRTQREQQLRVEITEAQVQRATARGEGAKVALLQAGNDLRRSEQLAKQGFIAPNKLESDRLAALAAQKELDAANQERHVAGHEVEQARAALMAVRGSGLAGARGFTVRAPTAGRVLRIAQASETVVTLGMPLLEVGDTQSLEVVAELLTSDALQARPGARVLIERWGGSVPLEGRVRLVEPSAFTKVSALGVEEQRVKVLIDITSPSAQWAALGDGFRVGVRIVTIVVEDAVKVPASAVFPLPQGSNDSVGGMAAFVVENGLARLVSVEIGARNASDAWVRRGLSAGATVIVYPPPAMKDGLRVKQRSVQSAA

Samples

Sample ID Description Type Environment
1 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
2 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
3 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
4 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
5 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
6 2929520902 Variovorax beijingensis 502 Isolate Unclassified
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
13 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
40 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
41 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
42 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
93 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
94 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
97 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
98 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
99 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
100 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
101 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
102 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
107 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
115 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
122 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
123 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
124 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
125 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
126 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
127 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
128 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
129 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
130 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
131 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
132 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
133 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
134 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
135 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
136 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.65
Metatranscriptomes 0
Isolates 3.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.44
Nodule 0.56
Rhizoplane 3.91
Rhizosphere 63.69
Stem 0
Stem Tuber 0
Unclassified 13.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10006053 3300003316 Bacteria 5708
2 rootH1_10006053 3300003323 Bacteria 2711
3 rootH2_10183620 3300003320 Bacteria 4757
4 rootL2_10010090 3300003322 Bacteria 35147
5 rootL2_10112843 3300003322 Bacteria 2618
6 rootH1_10004661 3300003316 Bacteria 2885
7 rootH1_10004661 3300003323 Bacteria 2697
8 rootH1_10317727 3300003323 Bacteria 1494
9 Ga0065165_1004260 3300005262 Bacteria 9040
10 Ga0065707_10093381 3300005295 Bacteria 3621
11 Ga0070690_100016658 3300005330 Bacteria 4407
12 Ga0070670_100044773 3300005331 Bacteria 3804
13 Ga0070677_10020175 3300005333 Bacteria 2424
14 Ga0068868_100005441 3300005338 Bacteria 8949
15 Ga0068868_100066896 3300005338 Bacteria 2859
16 Ga0070668_100200833 3300005347 Unclassified 1637
17 Ga0070669_100125159 3300005353 Bacteria 1966
18 Ga0070675_100004775 3300005354 Bacteria 10338
19 Ga0070671_100020708 3300005355 Bacteria 5365
20 Ga0070671_100052003 3300005355 Bacteria 3407
21 Ga0070674_100100124 3300005356 Bacteria 2110
22 Ga0070667_100007654 3300005367 Bacteria 8955
23 Ga0070667_100170731 3300005367 Bacteria 1920
24 Ga0070663_100008735 3300005455 Bacteria 6246
25 Ga0070663_100012078 3300005455 Bacteria 5450
26 Ga0070662_100002599 3300005457 Bacteria 11131
27 Ga0068867_100000006 3300005459 Bacteria 152530
28 Ga0068867_100073807 3300005459 Bacteria 2555
29 Ga0068867_100177279 3300005459 Bacteria 1692
30 Ga0070672_100078829 3300005543 Bacteria 2636
31 Ga0070665_100117768 3300005548 Bacteria 2659
32 Ga0068855_100186849 3300005563 Bacteria 2340
33 Ga0070664_100231830 3300005564 Bacteria 1655
34 Ga0068854_100184106 3300005578 Bacteria 1633
35 Ga0068856_100042091 3300005614 Bacteria 4492
36 Ga0068852_100128842 3300005616 Bacteria 2328
37 Ga0068859_100065865 3300005617 Bacteria 3656
38 Ga0068864_100079597 3300005618 Bacteria 2869
39 Ga0068851_10087542 3300005834 Bacteria 1636
40 Ga0068863_100112965 3300005841 Bacteria 2587
41 Ga0068858_100041209 3300005842 Bacteria 4282
42 Ga0068860_100109767 3300005843 Bacteria 2636
43 Ga0075368_10052582 3300006042 Bacteria 1621
44 Ga0075363_100001810 3300006048 Bacteria 8372
45 Ga0075364_10001526 3300006051 Bacteria 12611
46 Ga0075432_10017974 3300006058 Bacteria 2411
47 Ga0075367_10026871 3300006178 Bacteria 3268
48 Ga0075367_10067341 3300006178 Bacteria 2147
49 Ga0075367_10107387 3300006178 Bacteria 1711
50 Ga0075369_10007649 3300006186 Bacteria 4127
51 Ga0075366_10001876 3300006195 Bacteria 10600
52 Ga0075366_10002794 3300006195 Bacteria 9026
53 Ga0075366_10007449 3300006195 Bacteria 6047
54 Ga0097621_100014435 3300006237 Bacteria 5910
55 Ga0075370_10000129 3300006353 Bacteria 25189
56 Ga0075370_10000900 3300006353 Bacteria 12177
57 Ga0075370_10037958 3300006353 Bacteria 2710
58 Ga0075370_10118647 3300006353 Bacteria 1539
59 Ga0068871_100059001 3300006358 Bacteria 3126
60 Ga0097620_100065866 3300006931 Bacteria 3656
61 Ga0079104_1009095 3300006946 Bacteria 3395
62 Ga0105240_10003453 3300009093 Bacteria 24519
63 Ga0105240_10098591 3300009093 Bacteria 3558
64 Ga0105243_10002248 3300009148 Bacteria 16227
65 Ga0105248_10000917 3300009177 Bacteria 32799
66 Ga0105248_10021201 3300009177 Bacteria 7199
67 Ga0105248_10058490 3300009177 Bacteria 4329
68 Ga0105237_10000850 3300009545 Bacteria 41539
69 Ga0105237_10022484 3300009545 Bacteria 6469
70 Ga0105238_10085665 3300009551 Bacteria 3139
71 Ga0105239_10003220 3300010375 Bacteria 20190
72 Ga0105239_10027666 3300010375 Bacteria 6238
73 Ga0163163_10068586 3300014325 Bacteria 3529
74 Ga0157377_10000013 3300014745 Bacteria 267125
75 Ga0157377_10033855 3300014745 Bacteria 2792
76 Ga0157379_10004850 3300014968 Bacteria 11549
77 Ga0157376_10002496 3300014969 Bacteria 12460
78 Ga0163161_10126021 3300017792 Bacteria 1928
79 Ga0209673_1013026 3300025273 Bacteria 3308
80 Ga0209050_1000517 3300025298 Bacteria 64833
81 Ga0207656_10065638 3300025321 Bacteria 1602
82 Ga0207645_10033188 3300025907 Bacteria 3318
83 Ga0207695_10006862 3300025913 Bacteria 14656
84 Ga0207671_10010058 3300025914 Bacteria 7842
85 Ga0207671_10013010 3300025914 Bacteria 6655
86 Ga0207694_10045072 3300025924 Bacteria 3406
87 Ga0207650_10048153 3300025925 Bacteria 3143
88 Ga0207706_10003472 3300025933 Bacteria 15042
89 Ga0207706_10018798 3300025933 Bacteria 6215
90 Ga0207711_10053271 3300025941 Bacteria 3470
91 Ga0207689_10058425 3300025942 Bacteria 3173
92 Ga0207689_10064427 3300025942 Bacteria 3015
93 Ga0207651_10005288 3300025960 Bacteria 6607
94 Ga0207712_10098806 3300025961 Bacteria 2166
95 Ga0207658_10080541 3300025986 Bacteria 2494
96 Ga0207677_10030974 3300026023 Bacteria 3422
97 Ga0207677_10120662 3300026023 Bacteria 1972
98 Ga0207703_10048688 3300026035 Bacteria 3422
99 Ga0207703_10082742 3300026035 Bacteria 2680
100 Ga0207678_10006602 3300026067 Bacteria 10285
101 Ga0207641_10049639 3300026088 Bacteria 3547
102 Ga0207648_10000006 3300026089 Bacteria 223855
103 Ga0207648_10072019 3300026089 Bacteria 3012
104 Ga0207676_10005046 3300026095 Bacteria 9343
105 Ga0207674_10270953 3300026116 Bacteria 1645
106 Ga0207675_100195732 3300026118 Bacteria 1940
107 Ga0207683_10005109 3300026121 Bacteria 11262
108 Ga0207698_10038659 3300026142 Bacteria 3527
109 Ga0209813_10051013 3300027866 Bacteria 1293
110 Ga0268266_10039055 3300028379 Bacteria 4043
111 Ga0268265_10210646 3300028380 Unclassified 1693
112 Ga0268264_10326731 3300028381 Bacteria 1452
113 Ga0265336_10000010 3300028666 Bacteria 277947
114 Ga0307515_10001417 3300028794 Bacteria 54238
115 Ga0307515_10004586 3300028794 Bacteria 28443
116 Ga0307515_10306618 3300028794 Bacteria 1267
117 Ga0265324_10000910 3300029957 Bacteria 18714
118 Ga0307512_10115130 3300030522 Bacteria 1752
119 Ga0307509_10017438 3300031507 Bacteria 8266
120 Ga0307509_10147731 3300031507 Bacteria 2272
121 Ga0307408_100052479 3300031548 Bacteria 2941
122 Ga0307508_10000041 3300031616 Bacteria 147868
123 Ga0307508_10000082 3300031616 Bacteria 111720
124 Ga0307508_10060588 3300031616 Bacteria 3346
125 Ga0307508_10072243 3300031616 Bacteria 3024
126 Ga0307514_10005328 3300031649 Bacteria 11526
127 Ga0307516_10235737 3300031730 Bacteria 1531
128 Ga0307409_100010158 3300031995 Bacteria 5832
129 Ga0307415_100053030 3300032126 Bacteria 2761
130 Ga0307507_10042909 3300033179 Bacteria 4496
131 Ga0307510_10000881 3300033180 Bacteria 31584
132 Ga0373927_0050155 3300035695 Bacteria 2698
133 Ga0373925_0011660 3300037068 Bacteria 6357
134 Ga0373925_0025561 3300037068 Bacteria 4315
135 Ga0395905_0032803 3300037471 Bacteria 4882
136 Ga0451853_2799837 3300041512 Bacteria 2507
137 Ga0450898_000464 3300042134 Bacteria 4755
138 Ga0451577_0008014 3300042876 Bacteria 10312
139 Ga0466972_0043566 3300044658 Bacteria 2179
140 Ga0453684_0043835 3300044712 Bacteria 6004
141 Ga0453684_0259941 3300044712 Bacteria 1989
142 Ga0451576_0075257 3300045051 Bacteria 3513
143 Ga0495650_0007878 3300046471 Bacteria 6325
144 Ga0495625_0035359 3300046660 Bacteria 3683
145 Ga0495671_0039203 3300046692 Bacteria 2393
146 Ga0495687_004879 3300047443 Bacteria 8801
147 Ga0496102_0165179 3300048905 Bacteria 2083
148 Ga0496108_0046503 3300048911 Bacteria 3626
149 Ga0496108_0116697 3300048911 Bacteria 2287
150 Ga0496109_0343989 3300048912 Bacteria 1408
151 Ga0496110_0279859 3300048913 Bacteria 1519
152 Ga0496112_0006861 3300048915 Bacteria 10040
153 Ga0496113_0042780 3300048916 Bacteria 3348
154 Ga0501198_000047 3300049649 Bacteria 40126
155 Ga0501222_000056 3300049662 Bacteria 40303
156 Ga0501253_028525 3300049683 Bacteria 1046
157 Ga0501257_002131 3300049686 Bacteria 4136
158 Ga0501083_0036826 3300049744 Bacteria 3335
159 nmdc:mga03n38_5711_c1 3300050490 Bacteria 4262
160 nmdc:mga0yw44_3299_c1 3300050492 Bacteria 7133
161 nmdc:mga0k408_11542_c1 3300050493 Bacteria 3168
162 nmdc:mga0k408_12911_c1 3300050493 Bacteria 4574
163 nmdc:mga0k408_23589_c1 3300050493 Bacteria 3473
164 nmdc:mga0k408_50093_c1 3300050493 Bacteria 2418
165 nmdc:mga06z11_19994_c1 3300050494 Bacteria 3088
166 nmdc:mga06z11_4286_c2 3300050494 Bacteria 4521
167 nmdc:mga07m45_17976_c1 3300050496 Bacteria 3807
168 nmdc:mga07m45_33452_c1 3300050496 Bacteria 2855
169 nmdc:mga07m45_38378_c1 3300050496 Bacteria 2673
170 nmdc:mga07m45_39510_c1 3300050496 Bacteria 1539
171 Ga0500658_0008036 3300053134 Bacteria 3900
172 Ga0500568_0006673 3300053139 Bacteria 5769
173 Ga0500627_0044933 3300053158 Bacteria 1910
174 Ga0590071_009833 3300059421 Bacteria 2242
175 Ga0501082_0022716 3300060353 Bacteria 5402

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049683 Ga0501253_028525 Ga0501253_028525_15_890 264
2 3300048913 Ga0496110_0279859 Ga0496110_0279859_269_1465 314
3 3300060353 Ga0501082_0022716 Ga0501082_0022716_1692_2900 319
4 3300048911 Ga0496108_0116697 Ga0496108_0116697_502_1701 323
5 3300048912 Ga0496109_0343989 Ga0496109_0343989_114_1313 323
6 3300046692 Ga0495671_0039203 Ga0495671_0039203_202_1419 326
7 3300031649 Ga0307514_10005328 Ga0307514_100053285 327
8 3300049744 Ga0501083_0036826 Ga0501083_0036826_523_1764 327
9 3300028794 Ga0307515_10004586 Ga0307515_1000458621 328
10 3300031616 Ga0307508_10000082 Ga0307508_1000008217 328
11 3300030522 Ga0307512_10115130 Ga0307512_101151302 330
12 3300031548 Ga0307408_100052479 Ga0307408_1000524792 330
13 3300053158 Ga0500627_0044933 Ga0500627_0044933_668_1873 330
14 3300003322 rootL2_10112843 rootL2_101128432 331
15 3300005331 Ga0070670_100044773 Ga0070670_1000447732 332
16 3300028794 Ga0307515_10001417 Ga0307515_1000141721 332
17 3300041512 Ga0451853_2799837 Ga0451853_2799837_54_1262 332
18 3300005457 Ga0070662_100002599 Ga0070662_1000025995 333
19 3300025933 Ga0207706_10003472 Ga0207706_100034727 333
20 3300028666 Ga0265336_10000010 Ga0265336_10000010186 333
21 3300029957 Ga0265324_10000910 Ga0265324_100009108 333
22 3300003323 rootH1_10004661 rootH1_100046612 335
23 3300006237 Ga0097621_100014435 Ga0097621_1000144357 335
24 3300006358 Ga0068871_100059001 Ga0068871_1000590012 335
25 3300005356 Ga0070674_100100124 Ga0070674_1001001242 338
26 3300005843 Ga0068860_100109767 Ga0068860_1001097673 338
27 3300025961 Ga0207712_10098806 Ga0207712_100988062 338
28 3300028380 Ga0268265_10210646 Ga0268265_102106462 338
29 3300028381 Ga0268264_10326731 Ga0268264_103267311 338
30 3300045051 Ga0451576_0075257 Ga0451576_0075257_984_2177 338
31 3300003323 rootH1_10317727 rootH1_103177271 339
32 3300005614 Ga0068856_100042091 Ga0068856_1000420912 339
33 3300035695 Ga0373927_0050155 Ga0373927_0050155_582_1808 340
34 3300037068 Ga0373925_0011660 Ga0373925_0011660_2687_3913 340
35 3300005543 Ga0070672_100078829 Ga0070672_1000788292 341
36 3300006195 Ga0075366_10001876 Ga0075366_100018765 341
37 3300031995 Ga0307409_100010158 Ga0307409_1000101582 341
38 3300032126 Ga0307415_100053030 Ga0307415_1000530302 341
39 3300031730 Ga0307516_10235737 Ga0307516_102357371 343
40 3300005459 Ga0068867_100000006 Ga0068867_10000000622 344
41 3300009148 Ga0105243_10002248 Ga0105243_100022483 344
42 3300014745 Ga0157377_10000013 Ga0157377_1000001385 344
43 3300026089 Ga0207648_10000006 Ga0207648_10000006167 344
44 3300005459 Ga0068867_100073807 Ga0068867_1000738072 346
45 3300006048 Ga0075363_100001810 Ga0075363_1000018103 346
46 3300006178 Ga0075367_10026871 Ga0075367_100268713 346
47 3300006186 Ga0075369_10007649 Ga0075369_100076492 346
48 3300006353 Ga0075370_10037958 Ga0075370_100379582 346
49 3300026089 Ga0207648_10072019 Ga0207648_100720192 346
50 3300042876 Ga0451577_0008014 Ga0451577_0008014_234_1433 346
51 3300050493 nmdc:mga0k408_50093_c1 nmdc:mga0k408_50093_c1_384_1613 346
52 3300050494 nmdc:mga06z11_4286_c2 nmdc:mga06z11_4286_c2_2900_4129 346
53 3300050496 nmdc:mga07m45_33452_c1 nmdc:mga07m45_33452_c1_745_1974 346
54 3300049686 Ga0501257_002131 Ga0501257_002131_1745_2944 347
55 3300050493 nmdc:mga0k408_12911_c1 nmdc:mga0k408_12911_c1_30_1175 348
56 3300053139 Ga0500568_0006673 Ga0500568_0006673_1475_2704 349
57 3300003320 rootH2_10183620 rootH2_101836204 350
58 3300005338 Ga0068868_100066896 Ga0068868_1000668962 351
59 3300026023 Ga0207677_10120662 Ga0207677_101206622 351
60 3300026035 Ga0207703_10082742 Ga0207703_100827421 351
61 3300005353 Ga0070669_100125159 Ga0070669_1001251592 352
62 3300014969 Ga0157376_10002496 Ga0157376_100024965 352
63 3300031616 Ga0307508_10072243 Ga0307508_100722433 352
64 3300046471 Ga0495650_0007878 Ga0495650_0007878_479_1708 352
65 3300005841 Ga0068863_100112965 Ga0068863_1001129652 353
66 3300009177 Ga0105248_10000917 Ga0105248_1000091730 353
67 3300025941 Ga0207711_10053271 Ga0207711_100532711 353
68 3300048905 Ga0496102_0165179 Ga0496102_0165179_273_1472 353
69 3300048911 Ga0496108_0046503 Ga0496108_0046503_1205_2404 353
70 3300048915 Ga0496112_0006861 Ga0496112_0006861_926_2125 353
71 3300048916 Ga0496113_0042780 Ga0496113_0042780_2009_3208 353
72 3300005455 Ga0070663_100008735 Ga0070663_1000087354 357
73 3300005564 Ga0070664_100231830 Ga0070664_1002318301 357
74 3300006051 Ga0075364_10001526 Ga0075364_100015269 357
75 3300006178 Ga0075367_10107387 Ga0075367_101073872 357
76 3300006946 Ga0079104_1009095 Ga0079104_10090953 357
77 3300026067 Ga0207678_10006602 Ga0207678_100066022 357
78 3300050490 nmdc:mga03n38_5711_c1 nmdc:mga03n38_5711_c1_2171_3370 357
79 3300050492 nmdc:mga0yw44_3299_c1 nmdc:mga0yw44_3299_c1_5340_6539 357
80 3300059421 Ga0590071_009833 Ga0590071_009833_750_1997 358
81 3300005295 Ga0065707_10093381 Ga0065707_100933815 359
82 3300028379 Ga0268266_10039055 Ga0268266_100390553 361
83 3300044658 Ga0466972_0043566 Ga0466972_0043566_327_1526 361
84 3300005262 Ga0065165_1004260 Ga0065165_10042603 362
85 3300025273 Ga0209673_1013026 Ga0209673_10130262 362
86 3300028794 Ga0307515_10306618 Ga0307515_103066181 362
87 3300031616 Ga0307508_10000041 Ga0307508_100000418 362
88 3300033180 Ga0307510_10000881 Ga0307510_1000088110 362
89 3300025298 Ga0209050_1000517 Ga0209050_100051719 363
90 3300026118 Ga0207675_100195732 Ga0207675_1001957322 363
91 3300037471 Ga0395905_0032803 Ga0395905_0032803_491_1684 363
92 3300042134 Ga0450898_000464 Ga0450898_000464_2997_4193 364
93 3300009093 Ga0105240_10003453 Ga0105240_1000345320 366
94 3300009545 Ga0105237_10000850 Ga0105237_1000085045 366
95 3300009551 Ga0105238_10085665 Ga0105238_100856652 366
96 3300010375 Ga0105239_10003220 Ga0105239_100032207 366
97 3300025913 Ga0207695_10006862 Ga0207695_100068628 366
98 3300025914 Ga0207671_10010058 Ga0207671_100100582 366
99 3300025924 Ga0207694_10045072 Ga0207694_100450721 366
100 3300026088 Ga0207641_10049639 Ga0207641_100496393 366
101 iso_pu_bacteria 2585428062 2587756404 366
102 iso_pu_bacteria 2643221639 2644217433 366
103 iso_pu_bacteria 2643221654 2644302194 366
104 iso_pu_bacteria 2929520902 2929522433 366
105 3300050496 nmdc:mga07m45_38378_c1 nmdc:mga07m45_38378_c1_392_1612 367
106 iso_pu_bacteria 2585428058 2587734182 368
107 iso_pu_bacteria 2588253510 2588295585 368
108 3300044712 Ga0453684_0043835 Ga0453684_0043835_1765_2961 369
109 3300003316 rootH1_10006053 rootH1_100060533 370
110 3300003322 rootL2_10010090 rootL2_100100903 370
111 3300005330 Ga0070690_100016658 Ga0070690_1000166584 370
112 3300005333 Ga0070677_10020175 Ga0070677_100201752 370
113 3300005338 Ga0068868_100005441 Ga0068868_1000054416 370
114 3300005347 Ga0070668_100200833 Ga0070668_1002008331 370
115 3300005354 Ga0070675_100004775 Ga0070675_1000047752 370
116 3300005355 Ga0070671_100020708 Ga0070671_1000207084 370
117 3300005355 Ga0070671_100052003 Ga0070671_1000520032 370
118 3300005367 Ga0070667_100007654 Ga0070667_1000076544 370
119 3300005367 Ga0070667_100170731 Ga0070667_1001707312 370
120 3300005455 Ga0070663_100012078 Ga0070663_1000120783 370
121 3300005459 Ga0068867_100177279 Ga0068867_1001772792 370
122 3300005548 Ga0070665_100117768 Ga0070665_1001177682 370
123 3300005563 Ga0068855_100186849 Ga0068855_1001868492 370
124 3300005578 Ga0068854_100184106 Ga0068854_1001841061 370
125 3300005616 Ga0068852_100128842 Ga0068852_1001288422 370
126 3300005617 Ga0068859_100065865 Ga0068859_1000658654 370
127 3300005618 Ga0068864_100079597 Ga0068864_1000795974 370
128 3300005834 Ga0068851_10087542 Ga0068851_100875422 370
129 3300005842 Ga0068858_100041209 Ga0068858_1000412093 370
130 3300006042 Ga0075368_10052582 Ga0075368_100525821 370
131 3300006058 Ga0075432_10017974 Ga0075432_100179742 370
132 3300006178 Ga0075367_10067341 Ga0075367_100673413 370
133 3300006195 Ga0075366_10002794 Ga0075366_1000279410 370
134 3300006195 Ga0075366_10007449 Ga0075366_100074493 370
135 3300006353 Ga0075370_10000129 Ga0075370_1000012924 370
136 3300006353 Ga0075370_10000900 Ga0075370_1000090012 370
137 3300006353 Ga0075370_10118647 Ga0075370_101186471 370
138 3300006931 Ga0097620_100065866 Ga0097620_1000658662 370
139 3300009093 Ga0105240_10098591 Ga0105240_100985912 370
140 3300009177 Ga0105248_10021201 Ga0105248_1002120110 370
141 3300009177 Ga0105248_10058490 Ga0105248_100584902 370
142 3300009545 Ga0105237_10022484 Ga0105237_100224844 370
143 3300010375 Ga0105239_10027666 Ga0105239_100276664 370
144 3300014325 Ga0163163_10068586 Ga0163163_100685863 370
145 3300014745 Ga0157377_10033855 Ga0157377_100338553 370
146 3300014968 Ga0157379_10004850 Ga0157379_1000485012 370
147 3300017792 Ga0163161_10126021 Ga0163161_101260212 370
148 3300025321 Ga0207656_10065638 Ga0207656_100656382 370
149 3300025907 Ga0207645_10033188 Ga0207645_100331883 370
150 3300025914 Ga0207671_10013010 Ga0207671_100130103 370
151 3300025925 Ga0207650_10048153 Ga0207650_100481532 370
152 3300025933 Ga0207706_10018798 Ga0207706_100187982 370
153 3300025942 Ga0207689_10058425 Ga0207689_100584252 370
154 3300025942 Ga0207689_10064427 Ga0207689_100644273 370
155 3300025960 Ga0207651_10005288 Ga0207651_100052885 370
156 3300025986 Ga0207658_10080541 Ga0207658_100805412 370
157 3300026023 Ga0207677_10030974 Ga0207677_100309743 370
158 3300026035 Ga0207703_10048688 Ga0207703_100486882 370
159 3300026095 Ga0207676_10005046 Ga0207676_100050462 370
160 3300026116 Ga0207674_10270953 Ga0207674_102709532 370
161 3300026121 Ga0207683_10005109 Ga0207683_1000510913 370
162 3300026142 Ga0207698_10038659 Ga0207698_100386593 370
163 3300027866 Ga0209813_10051013 Ga0209813_100510131 370
164 3300031507 Ga0307509_10017438 Ga0307509_100174387 370
165 3300031507 Ga0307509_10147731 Ga0307509_101477312 370
166 3300031616 Ga0307508_10060588 Ga0307508_100605882 370
167 3300033179 Ga0307507_10042909 Ga0307507_100429092 370
168 3300037068 Ga0373925_0025561 Ga0373925_0025561_692_1909 370
169 3300044712 Ga0453684_0259941 Ga0453684_0259941_511_1716 370
170 3300046660 Ga0495625_0035359 Ga0495625_0035359_1790_3019 370
171 3300047443 Ga0495687_004879 Ga0495687_004879_3419_4648 370
172 3300049649 Ga0501198_000047 Ga0501198_000047_13248_14456 370
173 3300049662 Ga0501222_000056 Ga0501222_000056_13249_14457 370
174 3300050493 nmdc:mga0k408_11542_c1 nmdc:mga0k408_11542_c1_1251_2468 370
175 3300050493 nmdc:mga0k408_23589_c1 nmdc:mga0k408_23589_c1_1539_2768 370
176 3300050494 nmdc:mga06z11_19994_c1 nmdc:mga06z11_19994_c1_1402_2631 370
177 3300050496 nmdc:mga07m45_17976_c1 nmdc:mga07m45_17976_c1_297_1526 370
178 3300050496 nmdc:mga07m45_39510_c1 nmdc:mga07m45_39510_c1_232_1452 370
179 3300053134 Ga0500658_0008036 Ga0500658_0008036_2280_3509 370

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13437

HlyD_3

HlyD family secretion protein

202

310

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2x3x-assembly2.cif.gz_B structure of mouse syndapin i (crystal form 1) 0.9287 97 163
5gu9-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138i mutant 0.9145 58 202
5gua-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138y mutant 0.9129 55 202
2d5d-assembly1.cif.gz_A structure of biotin carboxyl carrier protein (74val start) from pyrococcus horikoshi ot3 ligand free form ii 0.9081 58 202
7wta-assembly1.cif.gz_D cryo-em structure of human pyruvate carboxylase in apo state 0.9077 58 201
ID Description Score Start End Superfamily
af_Q71LX4_2207_2375_1.20.1410.10 Mainly Alpha;Up-down Bundle;I/LWEQ domain;I/LWEQ domain 0.9689 102 155 1.20.1410.10
1vf7M03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9576 102 158 1.10.287.470
af_Q6AHQ8_8_294_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.9503 101 162 1.20.1270.60
1vf7B03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9451 102 158 1.10.287.470
2f1mC03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9449 101 162 1.10.287.470
ID Description Score Start End GO Terms
AF-A0A386PEN4-F1-model_v4 deleted 0.8265 1 369
AF-A0A386PEN4-F1-model_v4 deleted 0.8238 1 369
AF-A0A6N7B3C2-F1-model_v4 RND family efflux transporter MFP subunit 0.8061 29 356 GO:0005886
GO:0022857
GO:0030313
AF-A0A7X8GTF0-F1-model_v4 Efflux RND transporter periplasmic adaptor subunit 0.7821 2 366 GO:0015562
GO:1990281
AF-A0A833AZF6-F1-model_v4 deleted 0.7788 26 368

Feature Viewer

pLDDT pTM Quality
87.25 0.61 Medium
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Predicted Structure (AlphaFold2)

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