F272851

General Info

Members Datasets Scaffolds Average Seq Length
178 122 356 456

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0000574|Ga0500616_0000574_16550_18142
Length 530
Sequence VLEAVRSVFEPSFVHPAEPTTSSTVXXXTRVLGTAVDVSQLPSIGPFGVRRREGPPVHSGAMRGILSAAAYVPYRRLDRAEIRATFGKGGGKGHRTVASYDEDATTLAVDAARLALRAAPDHPAATPESLWFTTTTPPYADKTNATAVHAALRLDRTVPAVDAVGASRSAVGTLRNALSGGPTTLVCSADLRSGAPTSADEAAGGDAGAALLVGEGSEQLVLAEYLGGASLTEEFLERWRAPGDASSKVWEERFGESIYVPLGREAFDLALKAAALTADDVERVAVVGLHGRANKAIARKLGVADGAVADDFSSTIGNTGAASAGLALTALLETAQPGQVLALLSLADGADAFVFRATDALASWSPARSVADQVEAGAPVGYGTFLSWRGEVAVQPPNRPEPQRAAAPPSARRTEWKFGFVGSRDPSGALSLPPARISYADGTIDEGQAAPMADVPATIVTFTIDHLAYSPSPPIVFAVVDFDGGGRFPVELTDVDPASLAIGDRVEMTFRRLTSADGVHNYFWKAKPLR

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
4 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
5 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
6 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
21 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
45 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
49 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
50 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
51 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
54 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
55 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
56 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
57 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
58 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
59 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
60 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
61 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
62 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
67 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
68 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
69 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
72 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
73 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
74 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
75 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
76 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
77 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
78 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
79 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
80 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
81 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
82 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
83 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
84 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
85 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
98 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
99 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
100 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
101 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
102 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
105 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
106 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
107 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
110 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
111 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
112 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
113 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
114 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
115 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
116 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
117 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
118 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
119 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
120 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
121 2773857933 Frankia sp. BMG5.30 Isolate Nodule
122 8054913762 Frankia gtarii Agncl-10 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.19
Metatranscriptomes 0.56
Isolates 2.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.74
Nodule 1.12
Rhizoplane 3.37
Rhizosphere 81.46
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0000574 3300053153 Bacteria 44690
2 Ga0070668_100078921 3300005347 Bacteria 2576
3 Ga0070705_100020771 3300005440 Bacteria 3482
4 Ga0070708_100021409 3300005445 Bacteria 5467
5 Ga0070708_100064312 3300005445 Bacteria 3287
6 Ga0070698_100056445 3300005471 Bacteria 3979
7 Ga0070699_100256128 3300005518 Bacteria 1564
8 Ga0068853_100080947 3300005539 Bacteria 2843
9 Ga0070696_100100958 3300005546 Bacteria 2068
10 Ga0070665_100024624 3300005548 Bacteria 6066
11 Ga0070665_100080112 3300005548 Bacteria 3271
12 Ga0070665_100100730 3300005548 Bacteria 2893
13 Ga0068855_100160950 3300005563 Bacteria 2548
14 Ga0068854_100001290 3300005578 Bacteria 15083
15 Ga0068856_100023982 3300005614 Bacteria 5934
16 Ga0075365_10000229 3300006038 Bacteria 19102
17 Ga0075364_10017433 3300006051 Bacteria 4486
18 Ga0075428_100000002 3300006844 Bacteria 546374
19 Ga0075428_100013465 3300006844 Bacteria 9102
20 Ga0075430_100002101 3300006846 Bacteria 16477
21 Ga0075431_100003157 3300006847 Bacteria 15931
22 Ga0075431_100020557 3300006847 Bacteria 6745
23 Ga0075431_100150070 3300006847 Bacteria 2400
24 Ga0075431_100214795 3300006847 Bacteria 1963
25 Ga0075433_10035509 3300006852 Bacteria 4287
26 Ga0075429_100006806 3300006880 Bacteria 9920
27 Ga0075429_100026669 3300006880 Bacteria 5017
28 Ga0075429_100046130 3300006880 Bacteria 3792
29 Ga0075436_100135739 3300006914 Bacteria 1727
30 Ga0075436_100149716 3300006914 Bacteria 1642
31 Ga0075435_100021776 3300007076 Bacteria 4937
32 Ga0075435_100101418 3300007076 Bacteria 2385
33 Ga0105240_10030956 3300009093 Bacteria 6947
34 Ga0105240_10033216 3300009093 Bacteria 6670
35 Ga0111539_10003282 3300009094 Bacteria 21390
36 Ga0111539_10042307 3300009094 Bacteria 5472
37 Ga0111539_10121530 3300009094 Bacteria 3060
38 Ga0105245_10059153 3300009098 Bacteria 3450
39 Ga0114129_10000111 3300009147 Bacteria 81023
40 Ga0114129_10007852 3300009147 Bacteria 15181
41 Ga0114129_10468705 3300009147 Bacteria 1650
42 Ga0105243_10075009 3300009148 Bacteria 2744
43 Ga0105241_10007703 3300009174 Bacteria 7918
44 Ga0105242_10041872 3300009176 Bacteria 3696
45 Ga0105238_10008305 3300009551 Bacteria 10383
46 Ga0105239_10013704 3300010375 Bacteria 9004
47 Ga0105239_10068787 3300010375 Bacteria 3891
48 Ga0157369_10150015 3300013105 Bacteria 2464
49 Ga0157380_10155791 3300014326 Bacteria 1980
50 Ga0157379_10004124 3300014968 Bacteria 12397
51 Ga0213876_10019585 3300021384 Bacteria 3575
52 Ga0213876_10021306 3300021384 Bacteria 3428
53 Ga0224712_10001502 3300022467 Bacteria 5402
54 Ga0207684_10097050 3300025910 Bacteria 2516
55 Ga0207695_10018681 3300025913 Bacteria 8007
56 Ga0207695_10047026 3300025913 Bacteria 4570
57 Ga0207695_10056595 3300025913 Bacteria 4079
58 Ga0207671_10001844 3300025914 Bacteria 23655
59 Ga0207671_10008145 3300025914 Bacteria 8942
60 Ga0207694_10039569 3300025924 Bacteria 3628
61 Ga0207709_10149529 3300025935 Bacteria 1616
62 Ga0207661_10071492 3300025944 Bacteria 2836
63 Ga0207667_10068298 3300025949 Bacteria 3701
64 Ga0207639_10050994 3300026041 Bacteria 3145
65 Ga0207428_10004839 3300027907 Bacteria 12712
66 Ga0207428_10111793 3300027907 Bacteria 2102
67 Ga0268266_10057728 3300028379 Bacteria 3341
68 Ga0268264_10075060 3300028381 Bacteria 2874
69 Ga0265338_10002027 3300028800 Bacteria 31415
70 Ga0265338_10049237 3300028800 Bacteria 3822
71 Ga0307511_10080483 3300030521 Bacteria 2295
72 Ga0265325_10001030 3300031241 Bacteria 20087
73 Ga0265329_10024643 3300031242 Bacteria 1996
74 Ga0265339_10000911 3300031249 Bacteria 22722
75 Ga0265327_10000001 3300031251 Bacteria 894475
76 Ga0265327_10000252 3300031251 Bacteria 106339
77 Ga0265327_10006082 3300031251 Bacteria 9792
78 Ga0265313_10001925 3300031595 Bacteria 18831
79 Ga0316576_10018053 3300031727 Bacteria 4807
80 Ga0373926_0037310 3300035083 Bacteria 1728
81 Ga0316574_0006190 3300035398 Bacteria 6445
82 Ga0316574_0011087 3300035398 Bacteria 5113
83 Ga0373935_0010178 3300035692 Bacteria 5633
84 Ga0373933_0063067 3300035724 Bacteria 2240
85 Ga0373947_0029867 3300035725 Bacteria 3200
86 Ga0373947_0057463 3300035725 Bacteria 2354
87 Ga0373947_0064043 3300035725 Bacteria 2241
88 Ga0316582_0079091 3300036647 Bacteria 2143
89 Ga0316584_0004052 3300036712 Bacteria 9644
90 Ga0373925_0000304 3300037068 Bacteria 51583
91 Ga0373925_0015303 3300037068 Bacteria 5547
92 Ga0395901_0047941 3300038443 Bacteria 4436
93 Ga0400483_007399 3300039062 Bacteria 21290
94 Ga0400483_254542 3300039062 Bacteria 10178
95 Ga0400483_262753 3300039062 Bacteria 9432
96 Ga0436365_0116389 3300039437 Bacteria 3336
97 Ga0436365_1583948 3300039437 Bacteria 4566
98 Ga0436365_1759310 3300039437 Bacteria 7496
99 Ga0436360_1094247 3300039438 Bacteria 5471
100 Ga0436361_1211018 3300039447 Bacteria 3531
101 Ga0436362_1173356 3300039453 Bacteria 8840
102 Ga0495638_0020925 3300046460 Bacteria 4319
103 Ga0495651_0000176 3300046462 Bacteria 47308
104 Ga0495580_0003803 3300046472 Bacteria 12792
105 Ga0495580_0112469 3300046472 Bacteria 1891
106 Ga0495628_0027239 3300046516 Bacteria 4654
107 Ga0495630_0011556 3300046517 Bacteria 6392
108 Ga0495652_0001006 3300046529 Bacteria 32271
109 Ga0495622_0014429 3300046557 Bacteria 3668
110 Ga0495624_0061686 3300046690 Bacteria 2348
111 Ga0495600_0006519 3300046809 Bacteria 7104
112 Ga0495593_0038728 3300047673 Bacteria 2574
113 Ga0496108_0094770 3300048911 Bacteria 2541
114 Ga0496109_0039805 3300048912 Bacteria 4256
115 Ga0496111_0058612 3300048914 Bacteria 2788
116 Ga0496112_0012898 3300048915 Bacteria 7696
117 Ga0496112_0037348 3300048915 Bacteria 4741
118 Ga0496113_0013705 3300048916 Bacteria 5505
119 Ga0496126_0000267 3300048929 Bacteria 110994
120 Ga0496126_0001481 3300048929 Bacteria 36491
121 Ga0501032_0006077 3300049569 Bacteria 8897
122 Ga0501032_0021780 3300049569 Bacteria 4452
123 Ga0501033_0033996 3300049570 Bacteria 3826
124 Ga0501034_0001582 3300049571 Bacteria 29653
125 Ga0501034_0027354 3300049571 Bacteria 5800
126 Ga0501034_0034431 3300049571 Bacteria 5134
127 Ga0501037_0004645 3300049573 Bacteria 9980
128 Ga0501037_0054564 3300049573 Bacteria 2923
129 Ga0501038_0006217 3300049574 Bacteria 11042
130 Ga0501039_0028129 3300049575 Bacteria 4325
131 Ga0501040_0015199 3300049576 Bacteria 5086
132 Ga0501041_0012649 3300049577 Bacteria 4999
133 Ga0501043_0010041 3300049579 Bacteria 7426
134 Ga0501072_0017828 3300049588 Bacteria 5459
135 Ga0501072_0025157 3300049588 Bacteria 4635
136 Ga0501075_0036219 3300049591 Bacteria 3683
137 Ga0501076_0009508 3300049592 Bacteria 7180
138 Ga0501076_0030437 3300049592 Bacteria 4204
139 Ga0501077_0040410 3300049593 Bacteria 2971
140 Ga0501079_0022695 3300049741 Bacteria 4815
141 Ga0501080_0165718 3300049742 Bacteria 2039
142 Ga0501081_0021434 3300049743 Bacteria 4312
143 Ga0501083_0032917 3300049744 Bacteria 3552
144 Ga0501035_0070574 3300049822 Bacteria 3094
145 Ga0501044_0012434 3300049823 Bacteria 9217
146 Ga0501045_0006067 3300049824 Bacteria 8369
147 nmdc:mga03n38_22671_c1 3300050490 Bacteria 2545
148 nmdc:mga00v17_17416_c1 3300050491 Bacteria 4068
149 nmdc:mga00v17_2915_c1 3300050491 Bacteria 8769
150 nmdc:mga00v17_41028_c1 3300050491 Bacteria 2778
151 nmdc:mga00v17_43352_c1 3300050491 Bacteria 2709
152 nmdc:mga0yw44_18147_c1 3300050492 Bacteria 3848
153 nmdc:mga0yw44_2213_c1 3300050492 Bacteria 8194
154 nmdc:mga05p37_402228_c1 3300050507 Bacteria 1599
155 nmdc:mga05p37_5839_c1 3300050507 Bacteria 14477
156 nmdc:mga09592_18731_c1 3300050508 Bacteria 5679
157 nmdc:mga09592_236223_c1 3300050508 Bacteria 1584
158 nmdc:mga0qj67_46583_c1 3300050509 Bacteria 3424
159 nmdc:mga0qj67_92481_c1 3300050509 Bacteria 2432
160 nmdc:mga06r32_1048_c1 3300050510 Bacteria 24943
161 nmdc:mga06r32_19230_c1 3300050510 Bacteria 6269
162 nmdc:mga06r32_57998_c1 3300050510 Bacteria 3721
163 nmdc:mga08y16_62454_c1 3300050511 Bacteria 3890
164 nmdc:mga08y16_7478_c1 3300050511 Bacteria 11441
165 nmdc:mga0n895_65718_c1 3300050512 Bacteria 3591
166 nmdc:mga08x19_46216_c1 3300050514 Bacteria 2784
167 nmdc:mga0a205_786_c1 3300050515 Bacteria 25722
168 Ga0500566_0000096 3300053094 Bacteria 44026
169 Ga0500616_0001779 3300053153 Bacteria 19685
170 Ga0501084_0000059 3300054114 Bacteria 86630
171 Ga0501084_0026786 3300054114 Bacteria 4815
172 Ga0530510_0007090 3300061734 Bacteria 7801
173 Ga0530510_0021921 3300061734 Bacteria 4547
174 Ga0530510_0078847 3300061734 Bacteria 2395
175 2738705594 2738541274 Bacteria 6909446
176 2739332391 2738543028 Bacteria 6917070
177 2774905748 2773857933 Bacteria 5818019
178 8054918343 8054913762 Bacteria 7713009
179 Ga0500616_0000574
180 Ga0070668_100078921
181 Ga0070705_100020771
182 Ga0070708_100021409
183 Ga0070708_100064312
184 Ga0070698_100056445
185 Ga0070699_100256128
186 Ga0068853_100080947
187 Ga0070696_100100958
188 Ga0070665_100024624
189 Ga0070665_100080112
190 Ga0070665_100100730
191 Ga0068855_100160950
192 Ga0068854_100001290
193 Ga0068856_100023982
194 Ga0075365_10000229
195 Ga0075364_10017433
196 Ga0075428_100000002
197 Ga0075428_100013465
198 Ga0075430_100002101
199 Ga0075431_100003157
200 Ga0075431_100020557
201 Ga0075431_100150070
202 Ga0075431_100214795
203 Ga0075433_10035509
204 Ga0075429_100006806
205 Ga0075429_100026669
206 Ga0075429_100046130
207 Ga0075436_100135739
208 Ga0075436_100149716
209 Ga0075435_100021776
210 Ga0075435_100101418
211 Ga0105240_10030956
212 Ga0105240_10033216
213 Ga0111539_10003282
214 Ga0111539_10042307
215 Ga0111539_10121530
216 Ga0105245_10059153
217 Ga0114129_10000111
218 Ga0114129_10007852
219 Ga0114129_10468705
220 Ga0105243_10075009
221 Ga0105241_10007703
222 Ga0105242_10041872
223 Ga0105238_10008305
224 Ga0105239_10013704
225 Ga0105239_10068787
226 Ga0157369_10150015
227 Ga0157380_10155791
228 Ga0157379_10004124
229 Ga0213876_10019585
230 Ga0213876_10021306
231 Ga0224712_10001502
232 Ga0207684_10097050
233 Ga0207695_10018681
234 Ga0207695_10047026
235 Ga0207695_10056595
236 Ga0207671_10001844
237 Ga0207671_10008145
238 Ga0207694_10039569
239 Ga0207709_10149529
240 Ga0207661_10071492
241 Ga0207667_10068298
242 Ga0207639_10050994
243 Ga0207428_10004839
244 Ga0207428_10111793
245 Ga0268266_10057728
246 Ga0268264_10075060
247 Ga0265338_10002027
248 Ga0265338_10049237
249 Ga0307511_10080483
250 Ga0265325_10001030
251 Ga0265329_10024643
252 Ga0265339_10000911
253 Ga0265327_10000001
254 Ga0265327_10000252
255 Ga0265327_10006082
256 Ga0265313_10001925
257 Ga0316576_10018053
258 Ga0373926_0037310
259 Ga0316574_0006190
260 Ga0316574_0011087
261 Ga0373935_0010178
262 Ga0373933_0063067
263 Ga0373947_0029867
264 Ga0373947_0057463
265 Ga0373947_0064043
266 Ga0316582_0079091
267 Ga0316584_0004052
268 Ga0373925_0000304
269 Ga0373925_0015303
270 Ga0395901_0047941
271 Ga0400483_007399
272 Ga0400483_254542
273 Ga0400483_262753
274 Ga0436365_0116389
275 Ga0436365_1583948
276 Ga0436365_1759310
277 Ga0436360_1094247
278 Ga0436361_1211018
279 Ga0436362_1173356
280 Ga0495638_0020925
281 Ga0495651_0000176
282 Ga0495580_0003803
283 Ga0495580_0112469
284 Ga0495628_0027239
285 Ga0495630_0011556
286 Ga0495652_0001006
287 Ga0495622_0014429
288 Ga0495624_0061686
289 Ga0495600_0006519
290 Ga0495593_0038728
291 Ga0496108_0094770
292 Ga0496109_0039805
293 Ga0496111_0058612
294 Ga0496112_0012898
295 Ga0496112_0037348
296 Ga0496113_0013705
297 Ga0496126_0000267
298 Ga0496126_0001481
299 Ga0501032_0006077
300 Ga0501032_0021780
301 Ga0501033_0033996
302 Ga0501034_0001582
303 Ga0501034_0027354
304 Ga0501034_0034431
305 Ga0501037_0004645
306 Ga0501037_0054564
307 Ga0501038_0006217
308 Ga0501039_0028129
309 Ga0501040_0015199
310 Ga0501041_0012649
311 Ga0501043_0010041
312 Ga0501072_0017828
313 Ga0501072_0025157
314 Ga0501075_0036219
315 Ga0501076_0009508
316 Ga0501076_0030437
317 Ga0501077_0040410
318 Ga0501079_0022695
319 Ga0501080_0165718
320 Ga0501081_0021434
321 Ga0501083_0032917
322 Ga0501035_0070574
323 Ga0501044_0012434
324 Ga0501045_0006067
325 nmdc:mga03n38_22671_c1
326 nmdc:mga00v17_17416_c1
327 nmdc:mga00v17_2915_c1
328 nmdc:mga00v17_41028_c1
329 nmdc:mga00v17_43352_c1
330 nmdc:mga0yw44_18147_c1
331 nmdc:mga0yw44_2213_c1
332 nmdc:mga05p37_402228_c1
333 nmdc:mga05p37_5839_c1
334 nmdc:mga09592_18731_c1
335 nmdc:mga09592_236223_c1
336 nmdc:mga0qj67_46583_c1
337 nmdc:mga0qj67_92481_c1
338 nmdc:mga06r32_1048_c1
339 nmdc:mga06r32_19230_c1
340 nmdc:mga06r32_57998_c1
341 nmdc:mga08y16_62454_c1
342 nmdc:mga08y16_7478_c1
343 nmdc:mga0n895_65718_c1
344 nmdc:mga08x19_46216_c1
345 nmdc:mga0a205_786_c1
346 Ga0500566_0000096
347 Ga0500616_0001779
348 Ga0501084_0000059
349 Ga0501084_0026786
350 Ga0530510_0007090
351 Ga0530510_0021921
352 Ga0530510_0078847
353 2738705594
354 2739332391
355 2774905748
356 8054918343

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01796

OB_aCoA_assoc

DUF35 OB-fold domain, acyl-CoA-associated

450

511

0.95

PF08541

ACP_syn_III_C

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal

271

355

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6esq-assembly1.cif.gz_J structure of the acetoacetyl-coa thiolase/hmg-coa synthase complex from methanothermococcus thermolithotrophicus soaked with acetyl-coa 0.8836 2 306
2ebd-assembly1.cif.gz_B crystal structure of 3-oxoacyl-[acyl-carrier-protein] synthase iii from aquifex aeolicus vf5 0.8596 1 268
3h76-assembly1.cif.gz_B crystal structure of pqsd, a key enzyme in pseudomonas aeruginosa quinolone signal biosynthesis pathway 0.8562 2 270
3h77-assembly1.cif.gz_A crystal structure of pseudomonas aeruginosa pqsd in a covalent complex with anthranilate 0.8554 2 270
1xpm-assembly1.cif.gz_B crystal structure of staphylococcus aureus hmg-coa synthase with hmg-coa and acetoacetyl-coa and acetylated cysteine 0.8455 1 302
ID Description Score Start End Superfamily
af_Q58941_1_344_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8717 1 305 3.40.47.10
4ewpF01 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8584 2 126 3.40.47.10
3gweB01 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8565 2 127 3.40.47.10
af_Q2FZS0_1_313_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8528 2 270 3.40.47.10
2qnyA01 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8463 2 127 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A0A0V050-F1-model_v4 DUF35 domain-containing protein 0.979 351 434
AF-A0A0F5VKE0-F1-model_v4 Hydroxymethylglutaryl-CoA synthase 0.9742 182 286 GO:0016747
AF-A0A0A0V050-F1-model_v4 DUF35 domain-containing protein 0.9677 351 434
AF-A0A538LAF1-F1-model_v4 Hydroxymethylglutaryl-CoA synthase 0.9664 145 298 GO:0016746
AF-A0A534ZH19-F1-model_v4 3-hydroxy-3-methylglutaryl CoA synthase 0.9644 360 433

Map