F272507

General Info

Members Datasets Scaffolds Average Seq Length
178 123 356 651

Family's Representative Sequence

Representative Sequence 3300046453|Ga0495627_000918|Ga0495627_000918_16991_19096
Length 701
Sequence VSRDPCQVLACTSFFHETGNRDRETVKANTAKIRHFLSEITRLGEAAIPDDDFTPRLGRGRPKEGKATVKYGGRILAASRLAGTKTGITSKRFDGSRIGRGASMGRLLSSRDRLAGFRGRRAVVKASLVRMAGKGGLAARAHMRYIQRDGVTRDGLPGELYGPATDRADGEEFLARTAGDRHQFRFIVSAEDGTEYPDLKPYVRRLMTQVEEDLGTKLDWVAVDHFNTERPHTHVVLRGVDDQGDNLVIAREYISHGLRERASELVTLDLGPRTDQEIEARLRHDVDQERLTAIDRRLLRRMDAAREVSAADNDPFQQSVAAGRLRKLKAMDLAEDVGGGRYQLAEGIEDTLRRMGERGDIIRLMQRELTARRLDRSGVEQVIATDLREPLVGRLIQRGFSDEHRDRHYMIVDGIDGRVHYIDIGKGDATPAVSENAALRIELAKVAISPADRTVDAVARASSGRYSVDLHLAHDPQASEAYAQSHIRRLEAMRRVGAGPERQPDGSWTIPADHLDRAEAFAQRQQRDWPVSLSVLSRTPVAELAAKGAPTWLDRELATGSTSAVRDAGFGHEVRVALAARRQWLVEQELADGAGPAFRLRSGALERLGQHELEGAGGRLSEQIGKPFAPARNGDRIEGVIARRVDLESGSYALVERARDFTLVPWRDVLERNIGKAAAGIMRTDGISWHFGRDRAGPTIS

Samples

Sample ID Description Type Environment
1 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
6 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
7 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
8 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
9 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
50 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
82 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
83 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
84 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
85 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
86 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
87 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
88 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
89 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
90 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
91 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
94 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
95 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
96 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
97 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
98 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
99 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
100 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
101 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
102 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
103 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
104 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
105 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
106 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
107 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
108 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
109 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
110 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
111 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
112 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
113 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
114 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
115 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
116 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
117 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
118 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
119 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
120 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
121 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
122 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
123 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.07
Metatranscriptomes 0
Isolates 3.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.1
Nodule 0
Rhizoplane 0.56
Rhizosphere 71.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495627_000918 3300046453 Bacteria 20385
2 JGI24739J22299_10000722 3300001989 Bacteria 11971
3 JGI24739J22299_10001711 3300001989 Bacteria 8351
4 JGI24737J22298_10001800 3300001990 Bacteria 7675
5 JGI24735J21928_10000559 3300002067 Bacteria 13091
6 JGI24735J21928_10001708 3300002067 Bacteria 7751
7 JGI24735J21928_10005030 3300002067 Bacteria 4400
8 JGI24738J21930_10000159 3300002075 Bacteria 17004
9 Ga0055530_10002182 3300003791 Bacteria 12969
10 Ga0055540_1000618 3300003792 Bacteria 25319
11 Ga0055531_10000297 3300003794 Bacteria 49449
12 Ga0065165_1000213 3300005262 Bacteria 100746
13 Ga0070658_10000701 3300005327 Bacteria 29088
14 Ga0070658_10003721 3300005327 Bacteria 12474
15 Ga0070661_100000018 3300005344 Bacteria 135723
16 Ga0070674_100000013 3300005356 Bacteria 121838
17 Ga0070659_100002237 3300005366 Bacteria 13758
18 Ga0070659_100061867 3300005366 Bacteria 2959
19 Ga0070678_100000004 3300005456 Bacteria 72981
20 Ga0070662_100004358 3300005457 Bacteria 8945
21 Ga0070662_100006448 3300005457 Bacteria 7563
22 Ga0070662_100007962 3300005457 Bacteria 6895
23 Ga0070679_100001239 3300005530 Bacteria 22452
24 Ga0070679_100019640 3300005530 Bacteria 6575
25 Ga0070665_100000051 3300005548 Bacteria 249317
26 Ga0068855_100000648 3300005563 Bacteria 42506
27 Ga0068855_100002703 3300005563 Bacteria 21855
28 Ga0068855_100011474 3300005563 Bacteria 10709
29 Ga0068855_100047073 3300005563 Bacteria 5096
30 Ga0070664_100110941 3300005564 Bacteria 2394
31 Ga0068857_100000235 3300005577 Bacteria 37173
32 Ga0068854_100000071 3300005578 Bacteria 73211
33 Ga0068854_100001613 3300005578 Bacteria 13707
34 Ga0068852_100002804 3300005616 Bacteria 12075
35 Ga0068859_100000269 3300005617 Bacteria 51775
36 Ga0068864_100111340 3300005618 Bacteria 2439
37 Ga0068861_100000017 3300005719 Bacteria 78362
38 Ga0068851_10000145 3300005834 Bacteria 37857
39 Ga0068863_100000069 3300005841 Bacteria 116525
40 Ga0068863_100000339 3300005841 Bacteria 47676
41 Ga0075368_10000350 3300006042 Bacteria 13520
42 Ga0075363_100000043 3300006048 Bacteria 24265
43 Ga0075364_10000007 3300006051 Bacteria 73806
44 Ga0075362_10000027 3300006177 Bacteria 58346
45 Ga0075367_10000010 3300006178 Bacteria 43233
46 Ga0075367_10012367 3300006178 Bacteria 4548
47 Ga0075369_10000412 3300006186 Bacteria 12944
48 Ga0075366_10051274 3300006195 Bacteria 2452
49 Ga0097621_100008742 3300006237 Bacteria 7317
50 Ga0075370_10000024 3300006353 Bacteria 52434
51 Ga0097620_100000269 3300006931 Bacteria 51775
52 Ga0105240_10002001 3300009093 Bacteria 33626
53 Ga0105240_10003796 3300009093 Bacteria 23330
54 Ga0105240_10005353 3300009093 Bacteria 19142
55 Ga0105240_10015440 3300009093 Bacteria 10385
56 Ga0105240_10031160 3300009093 Bacteria 6920
57 Ga0105237_10050756 3300009545 Bacteria 4168
58 Ga0105238_10003671 3300009551 Bacteria 15290
59 Ga0105238_10014261 3300009551 Bacteria 8033
60 Ga0105238_10033589 3300009551 Bacteria 5221
61 Ga0105238_10141945 3300009551 Bacteria 2378
62 Ga0105148_100176 3300009978 Bacteria 9401
63 Ga0105239_10017217 3300010375 Bacteria 7990
64 Ga0105239_10017310 3300010375 Bacteria 7971
65 Ga0105239_10076921 3300010375 Bacteria 3671
66 Ga0157371_10000011 3300013102 Bacteria 377608
67 Ga0157371_10009452 3300013102 Bacteria 7671
68 Ga0157370_10000266 3300013104 Bacteria 66475
69 Ga0157369_10000632 3300013105 Bacteria 45648
70 Ga0157369_10001267 3300013105 Bacteria 31362
71 Ga0157372_10000908 3300013307 Bacteria 32182
72 Ga0209676_1000526 3300025292 Bacteria 59863
73 Ga0209564_1002029 3300025295 Bacteria 17560
74 Ga0209758_1000017 3300025297 Bacteria 754393
75 Ga0209050_1000001 3300025298 Bacteria 3563507
76 Ga0209051_1000395 3300025303 Bacteria 60692
77 Ga0209257_1000111 3300025304 Bacteria 234809
78 Ga0207656_10000058 3300025321 Bacteria 43858
79 Ga0207647_10004224 3300025904 Bacteria 10648
80 Ga0207647_10018709 3300025904 Bacteria 4677
81 Ga0207705_10000266 3300025909 Bacteria 50282
82 Ga0207705_10003178 3300025909 Bacteria 12506
83 Ga0207705_10010604 3300025909 Bacteria 6696
84 Ga0207695_10001678 3300025913 Bacteria 35629
85 Ga0207695_10006598 3300025913 Bacteria 15002
86 Ga0207695_10011601 3300025913 Bacteria 10655
87 Ga0207657_10043068 3300025919 Bacteria 3979
88 Ga0207649_10000034 3300025920 Bacteria 136049
89 Ga0207652_10000991 3300025921 Bacteria 26244
90 Ga0207652_10007443 3300025921 Bacteria 8822
91 Ga0207694_10038666 3300025924 Bacteria 3669
92 Ga0207694_10083873 3300025924 Bacteria 2506
93 Ga0207690_10005955 3300025932 Bacteria 7221
94 Ga0207706_10006679 3300025933 Bacteria 10669
95 Ga0207706_10010129 3300025933 Bacteria 8626
96 Ga0207706_10021551 3300025933 Bacteria 5785
97 Ga0207669_10000011 3300025937 Bacteria 142774
98 Ga0207711_10005358 3300025941 Bacteria 10864
99 Ga0207667_10001647 3300025949 Bacteria 28143
100 Ga0207667_10006258 3300025949 Bacteria 14449
101 Ga0207668_10015230 3300025972 Bacteria 4772
102 Ga0207640_10000086 3300025981 Bacteria 73224
103 Ga0207640_10000504 3300025981 Bacteria 23627
104 Ga0207702_10000470 3300026078 Bacteria 45673
105 Ga0207641_10000112 3300026088 Bacteria 120365
106 Ga0207641_10000165 3300026088 Bacteria 93436
107 Ga0207674_10007929 3300026116 Bacteria 12330
108 Ga0207675_100000546 3300026118 Bacteria 36690
109 Ga0207683_10000043 3300026121 Bacteria 92526
110 Ga0207698_10001606 3300026142 Bacteria 13152
111 Ga0209813_10000143 3300027866 Bacteria 24903
112 Ga0268266_10000002 3300028379 Bacteria 3059047
113 Ga0307408_100000928 3300031548 Bacteria 22856
114 Ga0307405_10000549 3300031731 Bacteria 14262
115 Ga0307406_10002281 3300031901 Bacteria 10434
116 Ga0307406_10005470 3300031901 Bacteria 6952
117 Ga0307412_10000483 3300031911 Bacteria 23799
118 Ga0307412_10000637 3300031911 Bacteria 20435
119 Ga0307414_10000135 3300032004 Bacteria 50571
120 Ga0237819_00411 3300038705 Bacteria 14820
121 Ga0495627_009625 3300046453 Bacteria 3547
122 Ga0495610_0000165 3300046512 Bacteria 73467
123 Ga0495610_0000213 3300046512 Bacteria 62796
124 Ga0495610_0001289 3300046512 Bacteria 22367
125 Ga0495610_0015105 3300046512 Bacteria 4503
126 Ga0495637_0004826 3300046520 Bacteria 6950
127 Ga0495643_0000054 3300046522 Bacteria 198757
128 Ga0495633_0000054 3300046558 Bacteria 151646
129 Ga0495670_0000008 3300046691 Bacteria 219555
130 Ga0495687_000200 3300047443 Bacteria 85752
131 Ga0495681_0000036 3300047470 Bacteria 124207
132 Ga0495681_0034601 3300047470 Bacteria 2516
133 Ga0495686_0001037 3300047472 Bacteria 33361
134 Ga0495686_0011158 3300047472 Bacteria 6340
135 Ga0495626_0001229 3300048091 Bacteria 21051
136 Ga0496116_0001227 3300048919 Bacteria 29879
137 Ga0496121_0004505 3300048924 Bacteria 18665
138 Ga0496121_0031638 3300048924 Bacteria 4829
139 Ga0496122_0015032 3300048925 Bacteria 7432
140 Ga0496123_0011996 3300048926 Bacteria 7434
141 Ga0496123_0021432 3300048926 Bacteria 5023
142 Ga0496124_0000469 3300048927 Bacteria 69682
143 Ga0496124_0005568 3300048927 Bacteria 14102
144 Ga0496125_0009089 3300048928 Bacteria 10279
145 Ga0496125_0015212 3300048928 Bacteria 7450
146 Ga0496126_0000202 3300048929 Bacteria 132786
147 Ga0496126_0002551 3300048929 Bacteria 24383
148 Ga0501223_000001 3300049663 Bacteria 156895
149 Ga0501224_000003 3300049664 Bacteria 189031
150 Ga0501233_000007 3300049668 Bacteria 39665
151 Ga0501233_000021 3300049668 Bacteria 24527
152 Ga0501235_000014 3300049669 Bacteria 32546
153 Ga0501249_000397 3300049679 Bacteria 11196
154 Ga0501225_0000001 3300049705 Bacteria 185804
155 Ga0501225_0000190 3300049705 Bacteria 19078
156 Ga0501281_00001 3300049777 Bacteria 41708
157 Ga0501226_000013 3300049853 Bacteria 175177
158 nmdc:mga03683_39_c1 3300050489 Bacteria 62423
159 nmdc:mga03n38_3_c1 3300050490 Bacteria 77674
160 nmdc:mga00v17_29_c1 3300050491 Bacteria 89620
161 nmdc:mga06z11_23_c1 3300050494 Bacteria 67588
162 nmdc:mga06z11_7232_c1 3300050494 Bacteria 4559
163 nmdc:mga04h51_15_c1 3300050495 Bacteria 76646
164 nmdc:mga07m45_5_c2 3300050496 Bacteria 297012
165 nmdc:mga0sz30_37_c3 3300050516 Bacteria 27761
166 Ga0500643_000689 3300053087 Bacteria 22541
167 Ga0500643_007391 3300053087 Bacteria 4439
168 Ga0500643_011207 3300053087 Bacteria 3284
169 Ga0500562_007456 3300053108 Bacteria 2760
170 Ga0500627_0000207 3300053158 Bacteria 16974
171 Ga0500625_000016 3300053729 Bacteria 102090
172 2600227284 2599185359 Bacteria 4772316
173 2778125400 2775507255 Bacteria 3945731
174 2819713812 2818991466 Bacteria 4748179
175 2928103072 2928100450 Bacteria 4837635
176 2928963367 2928959182 Bacteria 4725774
177 8054303625 8054302542 Bacteria 5698134
178 8057105217 8057101203 Bacteria 5034064
179 Ga0495627_000918
180 JGI24739J22299_10000722
181 JGI24739J22299_10001711
182 JGI24737J22298_10001800
183 JGI24735J21928_10000559
184 JGI24735J21928_10001708
185 JGI24735J21928_10005030
186 JGI24738J21930_10000159
187 Ga0055530_10002182
188 Ga0055540_1000618
189 Ga0055531_10000297
190 Ga0065165_1000213
191 Ga0070658_10000701
192 Ga0070658_10003721
193 Ga0070661_100000018
194 Ga0070674_100000013
195 Ga0070659_100002237
196 Ga0070659_100061867
197 Ga0070678_100000004
198 Ga0070662_100004358
199 Ga0070662_100006448
200 Ga0070662_100007962
201 Ga0070679_100001239
202 Ga0070679_100019640
203 Ga0070665_100000051
204 Ga0068855_100000648
205 Ga0068855_100002703
206 Ga0068855_100011474
207 Ga0068855_100047073
208 Ga0070664_100110941
209 Ga0068857_100000235
210 Ga0068854_100000071
211 Ga0068854_100001613
212 Ga0068852_100002804
213 Ga0068859_100000269
214 Ga0068864_100111340
215 Ga0068861_100000017
216 Ga0068851_10000145
217 Ga0068863_100000069
218 Ga0068863_100000339
219 Ga0075368_10000350
220 Ga0075363_100000043
221 Ga0075364_10000007
222 Ga0075362_10000027
223 Ga0075367_10000010
224 Ga0075367_10012367
225 Ga0075369_10000412
226 Ga0075366_10051274
227 Ga0097621_100008742
228 Ga0075370_10000024
229 Ga0097620_100000269
230 Ga0105240_10002001
231 Ga0105240_10003796
232 Ga0105240_10005353
233 Ga0105240_10015440
234 Ga0105240_10031160
235 Ga0105237_10050756
236 Ga0105238_10003671
237 Ga0105238_10014261
238 Ga0105238_10033589
239 Ga0105238_10141945
240 Ga0105148_100176
241 Ga0105239_10017217
242 Ga0105239_10017310
243 Ga0105239_10076921
244 Ga0157371_10000011
245 Ga0157371_10009452
246 Ga0157370_10000266
247 Ga0157369_10000632
248 Ga0157369_10001267
249 Ga0157372_10000908
250 Ga0209676_1000526
251 Ga0209564_1002029
252 Ga0209758_1000017
253 Ga0209050_1000001
254 Ga0209051_1000395
255 Ga0209257_1000111
256 Ga0207656_10000058
257 Ga0207647_10004224
258 Ga0207647_10018709
259 Ga0207705_10000266
260 Ga0207705_10003178
261 Ga0207705_10010604
262 Ga0207695_10001678
263 Ga0207695_10006598
264 Ga0207695_10011601
265 Ga0207657_10043068
266 Ga0207649_10000034
267 Ga0207652_10000991
268 Ga0207652_10007443
269 Ga0207694_10038666
270 Ga0207694_10083873
271 Ga0207690_10005955
272 Ga0207706_10006679
273 Ga0207706_10010129
274 Ga0207706_10021551
275 Ga0207669_10000011
276 Ga0207711_10005358
277 Ga0207667_10001647
278 Ga0207667_10006258
279 Ga0207668_10015230
280 Ga0207640_10000086
281 Ga0207640_10000504
282 Ga0207702_10000470
283 Ga0207641_10000112
284 Ga0207641_10000165
285 Ga0207674_10007929
286 Ga0207675_100000546
287 Ga0207683_10000043
288 Ga0207698_10001606
289 Ga0209813_10000143
290 Ga0268266_10000002
291 Ga0307408_100000928
292 Ga0307405_10000549
293 Ga0307406_10002281
294 Ga0307406_10005470
295 Ga0307412_10000483
296 Ga0307412_10000637
297 Ga0307414_10000135
298 Ga0237819_00411
299 Ga0495627_009625
300 Ga0495610_0000165
301 Ga0495610_0000213
302 Ga0495610_0001289
303 Ga0495610_0015105
304 Ga0495637_0004826
305 Ga0495643_0000054
306 Ga0495633_0000054
307 Ga0495670_0000008
308 Ga0495687_000200
309 Ga0495681_0000036
310 Ga0495681_0034601
311 Ga0495686_0001037
312 Ga0495686_0011158
313 Ga0495626_0001229
314 Ga0496116_0001227
315 Ga0496121_0004505
316 Ga0496121_0031638
317 Ga0496122_0015032
318 Ga0496123_0011996
319 Ga0496123_0021432
320 Ga0496124_0000469
321 Ga0496124_0005568
322 Ga0496125_0009089
323 Ga0496125_0015212
324 Ga0496126_0000202
325 Ga0496126_0002551
326 Ga0501223_000001
327 Ga0501224_000003
328 Ga0501233_000007
329 Ga0501233_000021
330 Ga0501235_000014
331 Ga0501249_000397
332 Ga0501225_0000001
333 Ga0501225_0000190
334 Ga0501281_00001
335 Ga0501226_000013
336 nmdc:mga03683_39_c1
337 nmdc:mga03n38_3_c1
338 nmdc:mga00v17_29_c1
339 nmdc:mga06z11_23_c1
340 nmdc:mga06z11_7232_c1
341 nmdc:mga04h51_15_c1
342 nmdc:mga07m45_5_c2
343 nmdc:mga0sz30_37_c3
344 Ga0500643_000689
345 Ga0500643_007391
346 Ga0500643_011207
347 Ga0500562_007456
348 Ga0500627_0000207
349 Ga0500625_000016
350 2600227284
351 2778125400
352 2819713812
353 2928103072
354 2928963367
355 8054303625
356 8057105217

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11843

DUF3363

Protein of unknown function (DUF3363)

321

698

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gop-assembly2.cif.gz_Y structure and conformational change of a replication protein a heterotrimer bound to ssdna 0.7603 341 395
2zjq-assembly1.cif.gz_A interaction of l7 with l11 induced by microccocin binding to the deinococcus radiodurans 50s subunit 0.6965 342 389
5jvh-assembly1.cif.gz_A the crystal structure large ribosomal subunit (50s) of deinococcus radiodurans in complex with evernimicin 0.6864 342 389
1ts4-assembly2.cif.gz_B q139k mutant of toxic shock syndrome toxin-1 from s. aureus 0.6786 336 401
4mtd-assembly1.cif.gz_B zinc uptake regulator complexed with zinc and dna 0.6615 400 462
ID Description Score Start End Superfamily
4gopY00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.7603 341 395 2.40.50.140
af_P09833_289_351_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.7272 336 391 2.40.50.100
af_A0A1D6LAF5_392_610_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.7033 340 392 2.40.50.140
af_Q7XPB2_2_100_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.6985 403 465 1.10.10.10
1saxB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.6926 400 462 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A529LFJ4-F1-model_v4 Conjugal transfer protein TraI 0.9907 95 208
AF-A0A529VU36-F1-model_v4 Conjugal transfer protein TraI 0.9871 64 231
AF-A0A529QBX4-F1-model_v4 Conjugal transfer protein TraI 0.9831 65 253
AF-A0A530BDJ2-F1-model_v4 Conjugal transfer protein TraI 0.9796 82 212
AF-A0A529VU36-F1-model_v4 Conjugal transfer protein TraI 0.9756 64 231

Map