F271638

General Info

Members Datasets Scaffolds Average Seq Length
178 131 356 606

Family's Representative Sequence

Representative Sequence 3300005535|Ga0070684_100000126|Ga0070684_1000001267
Length 672
Sequence MREIADQADRFGGWIGFQLRDQIEGFHGVEVEVEDDQLRTRLRLFESFGVVLHELQRKAGAFRSFAQLDREKQIAHYSEDSLSLIWHTDTVFSKRTRSEITEDGTFEFYHETMDLHSYARPDRVRVEHVDLDLHVDFDRRILDGTATLSFKRYEGAELILDTRDLTIHDVENAVGFEVGEAHPIFGAPLHIRLGGDGPVRVRYSTAPGASGLQWLEPAQTAGKRSPFLFTQSQAIHARSWIPLQDSPGVRITYTARVHTPEGLRAVMSAEQQADGSFRLDRPIPSYLIALAAGDLARREIGPRSAIFAEPSVVDAAAREFEDTEAMIAAVEGLYGPYRWGRYDILVLPPSFPFGGMENPLLTFATPTVIAGDKSLVSLVAHELAHSWSGNLVTNATWSDFWLNEGFTVYVERRIIEKLYGPERAAMEAVLGRRELDRNLEQLPAADRILHIDLAGRDPDDGVTLVPYEKGALLLLTIEQAVGRERFDEFLREYFDHFAFQSITTAEFLEYIRLKLPNSVPLDEWIYQPPIPEGAFELRSDAFDRIGAGWPSDTAQWSTHEWLHFLRTRENPDLARLDREFHLTESGNSEIVAQWLQMAVAADYAPAMPKLEEFLCSVGRRKFLKPLYTELMRTAAGRDRAIRIYAKARAGYHPIAQSTLDAIVRAGLKSRAD

Samples

Sample ID Description Type Environment
1 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
91 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
92 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
96 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
97 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
98 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
102 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
114 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
115 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
116 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
119 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
120 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
121 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
122 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
123 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
124 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
125 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
126 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
127 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
128 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
129 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
130 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
131 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.07
Metatranscriptomes 0
Isolates 3.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.81
Nodule 0.56
Rhizoplane 4.49
Rhizosphere 88.2
Stem 0
Stem Tuber 0
Unclassified 0.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070684_100000126 3300005535 Bacteria 50767
2 LJQas_1000160 3300000549 Bacteria 11924
3 JGI25406J46586_10001319 3300003203 Bacteria 11666
4 Ga0055531_10019947 3300003794 Bacteria 2680
5 Ga0065707_10085748 3300005295 Bacteria 5908
6 Ga0070683_100000063 3300005329 Bacteria 79423
7 Ga0070670_100000914 3300005331 Bacteria 23199
8 Ga0070670_100025019 3300005331 Bacteria 5136
9 Ga0070670_100045422 3300005331 Bacteria 3776
10 Ga0070666_10000539 3300005335 Bacteria 22827
11 Ga0070689_100043110 3300005340 Bacteria 3466
12 Ga0070669_100004929 3300005353 Bacteria 9642
13 Ga0070675_100005995 3300005354 Bacteria 9313
14 Ga0070675_100026917 3300005354 Bacteria 4617
15 Ga0070671_100046881 3300005355 Bacteria 3594
16 Ga0070667_100004144 3300005367 Bacteria 12254
17 Ga0070667_100074801 3300005367 Bacteria 2890
18 Ga0070703_10000204 3300005406 Bacteria 28691
19 Ga0070709_10052809 3300005434 Bacteria 2556
20 Ga0070713_100052304 3300005436 Bacteria 3382
21 Ga0070694_100005280 3300005444 Bacteria 7810
22 Ga0070694_100007096 3300005444 Bacteria 6820
23 Ga0070708_100010960 3300005445 Bacteria 7365
24 Ga0070663_100033730 3300005455 Bacteria 3539
25 Ga0068867_100040104 3300005459 Bacteria 3416
26 Ga0070707_100000252 3300005468 Bacteria 53706
27 Ga0070707_100001260 3300005468 Bacteria 24895
28 Ga0070707_100060805 3300005468 Bacteria 3623
29 Ga0070672_100005439 3300005543 Bacteria 8442
30 Ga0070672_100053540 3300005543 Bacteria 3155
31 Ga0070686_100069931 3300005544 Bacteria 2294
32 Ga0070665_100023523 3300005548 Bacteria 6203
33 Ga0070704_100001069 3300005549 Bacteria 14167
34 Ga0070704_100011651 3300005549 Bacteria 5399
35 Ga0070704_100030954 3300005549 Bacteria 3592
36 Ga0070664_100124812 3300005564 Bacteria 2257
37 Ga0068856_100001107 3300005614 Bacteria 28449
38 Ga0068859_100000005 3300005617 Bacteria 430800
39 Ga0068859_100004244 3300005617 Bacteria 14630
40 Ga0068859_100013049 3300005617 Bacteria 8349
41 Ga0068864_100013186 3300005618 Bacteria 6842
42 Ga0068864_100037026 3300005618 Bacteria 4161
43 Ga0068861_100007466 3300005719 Bacteria 7494
44 Ga0068870_10005161 3300005840 Bacteria 5685
45 Ga0068863_100016612 3300005841 Bacteria 7063
46 Ga0068863_100020811 3300005841 Bacteria 6265
47 Ga0068858_100002381 3300005842 Bacteria 19006
48 Ga0068858_100134045 3300005842 Bacteria 2323
49 Ga0068860_100000666 3300005843 Bacteria 39791
50 Ga0068860_100083427 3300005843 Bacteria 3039
51 Ga0068860_100103901 3300005843 Bacteria 2712
52 Ga0068860_100115690 3300005843 Bacteria 2565
53 Ga0081455_10001512 3300005937 Bacteria 28688
54 Ga0081455_10022193 3300005937 Bacteria 5938
55 Ga0081539_10000108 3300005985 Bacteria 195322
56 Ga0081539_10001041 3300005985 Bacteria 50862
57 Ga0097621_100035008 3300006237 Bacteria 4010
58 Ga0075433_10008350 3300006852 Bacteria 8259
59 Ga0075434_100008405 3300006871 Bacteria 9601
60 Ga0068865_100078955 3300006881 Bacteria 2356
61 Ga0075436_100033979 3300006914 Bacteria 3514
62 Ga0097620_100000005 3300006931 Bacteria 430800
63 Ga0097620_100004244 3300006931 Bacteria 14630
64 Ga0097620_100013049 3300006931 Bacteria 8349
65 Ga0105240_10000381 3300009093 Bacteria 83148
66 Ga0105240_10032862 3300009093 Bacteria 6710
67 Ga0105240_10058254 3300009093 Bacteria 4822
68 Ga0111539_10018047 3300009094 Bacteria 8740
69 Ga0111539_10060476 3300009094 Bacteria 4490
70 Ga0111539_10168009 3300009094 Bacteria 2563
71 Ga0114129_10002354 3300009147 Bacteria 26222
72 Ga0114129_10079038 3300009147 Bacteria 4574
73 Ga0114129_10082713 3300009147 Unclassified 4460
74 Ga0105243_10000069 3300009148 Bacteria 121944
75 Ga0105243_10028095 3300009148 Bacteria 4315
76 Ga0105243_10041475 3300009148 Bacteria 3600
77 Ga0105242_10000023 3300009176 Bacteria 111152
78 Ga0105242_10000344 3300009176 Bacteria 37518
79 Ga0105248_10027023 3300009177 Bacteria 6384
80 Ga0105237_10000591 3300009545 Bacteria 50563
81 Ga0157374_10006338 3300013296 Bacteria 10034
82 Ga0157378_10002725 3300013297 Bacteria 15732
83 Ga0157378_10014383 3300013297 Bacteria 6927
84 Ga0157378_10070717 3300013297 Bacteria 3133
85 Ga0157378_10107974 3300013297 Bacteria 2548
86 Ga0157375_10000927 3300013308 Bacteria 25442
87 Ga0157375_10058422 3300013308 Bacteria 3816
88 Ga0163163_10002547 3300014325 Bacteria 15441
89 Ga0157377_10031559 3300014745 Bacteria 2880
90 Ga0157379_10006462 3300014968 Bacteria 10106
91 Ga0157376_10014044 3300014969 Bacteria 5995
92 Ga0163161_10001980 3300017792 Bacteria 14861
93 Ga0209257_1000067 3300025304 Bacteria 342468
94 Ga0207653_10000014 3300025885 Bacteria 152002
95 Ga0207645_10013442 3300025907 Bacteria 5515
96 Ga0207643_10008792 3300025908 Bacteria 5417
97 Ga0207684_10043459 3300025910 Bacteria 3810
98 Ga0207695_10003584 3300025913 Bacteria 21730
99 Ga0207695_10031847 3300025913 Bacteria 5777
100 Ga0207646_10001738 3300025922 Bacteria 26503
101 Ga0207646_10009873 3300025922 Bacteria 9394
102 Ga0207646_10053674 3300025922 Bacteria 3605
103 Ga0207650_10000872 3300025925 Bacteria 22890
104 Ga0207659_10089974 3300025926 Bacteria 2290
105 Ga0207706_10013488 3300025933 Bacteria 7427
106 Ga0207686_10000025 3300025934 Bacteria 169534
107 Ga0207686_10000160 3300025934 Bacteria 51361
108 Ga0207709_10000024 3300025935 Bacteria 369177
109 Ga0207709_10028837 3300025935 Bacteria 3212
110 Ga0207670_10032149 3300025936 Bacteria 3372
111 Ga0207691_10009729 3300025940 Bacteria 9226
112 Ga0207691_10018475 3300025940 Bacteria 6607
113 Ga0207711_10001949 3300025941 Bacteria 18732
114 Ga0207711_10115537 3300025941 Bacteria 2391
115 Ga0207689_10039792 3300025942 Bacteria 3892
116 Ga0207661_10000020 3300025944 Bacteria 216011
117 Ga0207679_10094371 3300025945 Bacteria 2323
118 Ga0207667_10092447 3300025949 Bacteria 3124
119 Ga0207640_10055207 3300025981 Bacteria 2601
120 Ga0207658_10002024 3300025986 Bacteria 15134
121 Ga0207703_10017511 3300026035 Bacteria 5592
122 Ga0207678_10039514 3300026067 Bacteria 4095
123 Ga0207678_10070652 3300026067 Bacteria 2993
124 Ga0207708_10024879 3300026075 Bacteria 4531
125 Ga0207702_10016648 3300026078 Bacteria 6085
126 Ga0207641_10010576 3300026088 Bacteria 7571
127 Ga0207676_10063274 3300026095 Bacteria 2938
128 Ga0207675_100009195 3300026118 Bacteria 9271
129 Ga0207683_10002494 3300026121 Bacteria 16051
130 Ga0207428_10004771 3300027907 Bacteria 12808
131 Ga0207428_10013170 3300027907 Bacteria 7240
132 Ga0268266_10145753 3300028379 Bacteria 2129
133 Ga0268264_10003861 3300028381 Bacteria 12860
134 Ga0268264_10111585 3300028381 Bacteria 2396
135 Ga0265331_10034381 3300031250 Bacteria 2501
136 Ga0265316_10034810 3300031344 Bacteria 4089
137 Ga0265342_10046724 3300031712 Bacteria 2601
138 Ga0307414_10001515 3300032004 Bacteria 12072
139 Ga0373937_0015357 3300036401 Bacteria 6773
140 Ga0237819_01720 3300038705 Bacteria 5251
141 Ga0451800_0507779 3300041459 Bacteria 6712
142 Ga0451806_378965 3300041462 Bacteria 11217
143 Ga0451849_0258968 3300041505 Bacteria 2383
144 Ga0451576_0023948 3300045051 Bacteria 6600
145 Ga0495592_0008771 3300046454 Bacteria 7593
146 Ga0495608_0056495 3300046511 Bacteria 2592
147 Ga0495618_0056134 3300046514 Bacteria 2494
148 Ga0495630_0012497 3300046517 Bacteria 6166
149 Ga0495587_0025735 3300046536 Bacteria 3595
150 Ga0495645_0002785 3300046543 Bacteria 11859
151 Ga0495686_0012074 3300047472 Bacteria 6066
152 Ga0496106_0004682 3300048909 Bacteria 10142
153 Ga0496107_0007385 3300048910 Bacteria 7578
154 Ga0496108_0088653 3300048911 Bacteria 2629
155 Ga0496109_0000156 3300048912 Bacteria 66509
156 Ga0496110_0046459 3300048913 Bacteria 3799
157 Ga0496113_0036207 3300048916 Bacteria 3615
158 Ga0496118_0043794 3300048921 Bacteria 3513
159 Ga0496122_0002817 3300048925 Bacteria 23835
160 Ga0501067_0019820 3300049583 Bacteria 3723
161 nmdc:mga05p37_35514_c1 3300050507 Bacteria 6112
162 nmdc:mga05p37_357591_c1 3300050507 Bacteria 1718
163 nmdc:mga08y16_132536_c1 3300050511 Bacteria 2591
164 nmdc:mga08y16_19940_c1 3300050511 Bacteria 7074
165 nmdc:mga0rr50_43379_c1 3300050513 Bacteria 3291
166 nmdc:mga08x19_24223_c1 3300050514 Bacteria 3769
167 nmdc:mga0a205_612_c1 3300050515 Bacteria 28422
168 Ga0495595_0028015 3300053084 Bacteria 2513
169 Ga0500643_007107 3300053087 Bacteria 4579
170 Ga0500555_010842 3300053103 Bacteria 2615
171 Ga0500568_0001186 3300053139 Bacteria 17420
172 2547501643 2547132130 Bacteria 4660562
173 2578456951 2576861471 Bacteria 4648976
174 2643997927 2643221598 Bacteria 4578346
175 2816518422 2816332141 Bacteria 4436036
176 2842394469 2842391507 Bacteria 4486072
177 2852687226 2852684882 Bacteria 5463342
178 2919137016 2919134579 Bacteria 4480386
179 Ga0070684_100000126
180 LJQas_1000160
181 JGI25406J46586_10001319
182 Ga0055531_10019947
183 Ga0065707_10085748
184 Ga0070683_100000063
185 Ga0070670_100000914
186 Ga0070670_100025019
187 Ga0070670_100045422
188 Ga0070666_10000539
189 Ga0070689_100043110
190 Ga0070669_100004929
191 Ga0070675_100005995
192 Ga0070675_100026917
193 Ga0070671_100046881
194 Ga0070667_100004144
195 Ga0070667_100074801
196 Ga0070703_10000204
197 Ga0070709_10052809
198 Ga0070713_100052304
199 Ga0070694_100005280
200 Ga0070694_100007096
201 Ga0070708_100010960
202 Ga0070663_100033730
203 Ga0068867_100040104
204 Ga0070707_100000252
205 Ga0070707_100001260
206 Ga0070707_100060805
207 Ga0070672_100005439
208 Ga0070672_100053540
209 Ga0070686_100069931
210 Ga0070665_100023523
211 Ga0070704_100001069
212 Ga0070704_100011651
213 Ga0070704_100030954
214 Ga0070664_100124812
215 Ga0068856_100001107
216 Ga0068859_100000005
217 Ga0068859_100004244
218 Ga0068859_100013049
219 Ga0068864_100013186
220 Ga0068864_100037026
221 Ga0068861_100007466
222 Ga0068870_10005161
223 Ga0068863_100016612
224 Ga0068863_100020811
225 Ga0068858_100002381
226 Ga0068858_100134045
227 Ga0068860_100000666
228 Ga0068860_100083427
229 Ga0068860_100103901
230 Ga0068860_100115690
231 Ga0081455_10001512
232 Ga0081455_10022193
233 Ga0081539_10000108
234 Ga0081539_10001041
235 Ga0097621_100035008
236 Ga0075433_10008350
237 Ga0075434_100008405
238 Ga0068865_100078955
239 Ga0075436_100033979
240 Ga0097620_100000005
241 Ga0097620_100004244
242 Ga0097620_100013049
243 Ga0105240_10000381
244 Ga0105240_10032862
245 Ga0105240_10058254
246 Ga0111539_10018047
247 Ga0111539_10060476
248 Ga0111539_10168009
249 Ga0114129_10002354
250 Ga0114129_10079038
251 Ga0114129_10082713
252 Ga0105243_10000069
253 Ga0105243_10028095
254 Ga0105243_10041475
255 Ga0105242_10000023
256 Ga0105242_10000344
257 Ga0105248_10027023
258 Ga0105237_10000591
259 Ga0157374_10006338
260 Ga0157378_10002725
261 Ga0157378_10014383
262 Ga0157378_10070717
263 Ga0157378_10107974
264 Ga0157375_10000927
265 Ga0157375_10058422
266 Ga0163163_10002547
267 Ga0157377_10031559
268 Ga0157379_10006462
269 Ga0157376_10014044
270 Ga0163161_10001980
271 Ga0209257_1000067
272 Ga0207653_10000014
273 Ga0207645_10013442
274 Ga0207643_10008792
275 Ga0207684_10043459
276 Ga0207695_10003584
277 Ga0207695_10031847
278 Ga0207646_10001738
279 Ga0207646_10009873
280 Ga0207646_10053674
281 Ga0207650_10000872
282 Ga0207659_10089974
283 Ga0207706_10013488
284 Ga0207686_10000025
285 Ga0207686_10000160
286 Ga0207709_10000024
287 Ga0207709_10028837
288 Ga0207670_10032149
289 Ga0207691_10009729
290 Ga0207691_10018475
291 Ga0207711_10001949
292 Ga0207711_10115537
293 Ga0207689_10039792
294 Ga0207661_10000020
295 Ga0207679_10094371
296 Ga0207667_10092447
297 Ga0207640_10055207
298 Ga0207658_10002024
299 Ga0207703_10017511
300 Ga0207678_10039514
301 Ga0207678_10070652
302 Ga0207708_10024879
303 Ga0207702_10016648
304 Ga0207641_10010576
305 Ga0207676_10063274
306 Ga0207675_100009195
307 Ga0207683_10002494
308 Ga0207428_10004771
309 Ga0207428_10013170
310 Ga0268266_10145753
311 Ga0268264_10003861
312 Ga0268264_10111585
313 Ga0265331_10034381
314 Ga0265316_10034810
315 Ga0265342_10046724
316 Ga0307414_10001515
317 Ga0373937_0015357
318 Ga0237819_01720
319 Ga0451800_0507779
320 Ga0451806_378965
321 Ga0451849_0258968
322 Ga0451576_0023948
323 Ga0495592_0008771
324 Ga0495608_0056495
325 Ga0495618_0056134
326 Ga0495630_0012497
327 Ga0495587_0025735
328 Ga0495645_0002785
329 Ga0495686_0012074
330 Ga0496106_0004682
331 Ga0496107_0007385
332 Ga0496108_0088653
333 Ga0496109_0000156
334 Ga0496110_0046459
335 Ga0496113_0036207
336 Ga0496118_0043794
337 Ga0496122_0002817
338 Ga0501067_0019820
339 nmdc:mga05p37_35514_c1
340 nmdc:mga05p37_357591_c1
341 nmdc:mga08y16_132536_c1
342 nmdc:mga08y16_19940_c1
343 nmdc:mga0rr50_43379_c1
344 nmdc:mga08x19_24223_c1
345 nmdc:mga0a205_612_c1
346 Ga0495595_0028015
347 Ga0500643_007107
348 Ga0500555_010842
349 Ga0500568_0001186
350 2547501643
351 2578456951
352 2643997927
353 2816518422
354 2842394469
355 2852687226
356 2919137016

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09127

Leuk-A4-hydro_C

Leukotriene A4 hydrolase, C-terminal

556

663

0.92

PF01433

Peptidase_M1

Peptidase family M1 domain

318

522

0.89

PF17900

Peptidase_M1_N

Peptidase M1 N-terminal domain

125

286

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
5nie-assembly1.cif.gz_A crystal structure of human lta4h mutant r563a in open conformation 0.9282 43 639
3cia-assembly4.cif.gz_D crystal structure of cold-aminopeptidase from colwellia psychrerythraea 0.918 42 639
3cia-assembly2.cif.gz_B crystal structure of cold-aminopeptidase from colwellia psychrerythraea 0.9174 42 639
2xpy-assembly1.cif.gz_A structure of native leukotriene a4 hydrolase from saccharomyces cerevisiae 0.9166 43 638
3cia-assembly4.cif.gz_D crystal structure of cold-aminopeptidase from colwellia psychrerythraea 0.9165 42 639
ID Description Score Start End Superfamily
3ciaD03 Mainly Alpha;Orthogonal Bundle;Neutral Protease; domain 2;Neutral Protease Domain 2 0.9885 342 496 1.10.390.10
3ciaD03 Mainly Alpha;Orthogonal Bundle;Neutral Protease; domain 2;Neutral Protease Domain 2 0.9822 342 496 1.10.390.10
3ciaA01 Mainly Beta;Sandwich;Immunoglobulin-like;tricorn interacting facor f3 domain 0.9603 53 244 2.60.40.1730
3fulA02 Alpha Beta;2-Layer Sandwich;Zincin-like; 0.96 246 341 3.30.2010.30
3ciaA01 Mainly Beta;Sandwich;Immunoglobulin-like;tricorn interacting facor f3 domain 0.9552 53 244 2.60.40.1730
ID Description Score Start End GO Terms
AF-A0A4Q3CNP0-F1-model_v4 Aminopeptidase 0.991 546 639 GO:0004177
GO:0008237
GO:0008270
AF-A0A0F9JBI2-F1-model_v4 Peptidase M1 leukotriene A4 hydrolase/aminopeptidase C-terminal domain-containing protein 0.977 73 637 GO:0005737
GO:0006508
GO:0008237
GO:0008270
AF-A0A6P1SHE7-F1-model_v4 deleted 0.9752 43 638
AF-A0A4Q3CNP0-F1-model_v4 Aminopeptidase 0.9705 546 639 GO:0004177
GO:0008237
GO:0008270
AF-A0A3D5EAS6-F1-model_v4 Aminopeptidase 0.969 497 639 GO:0004177
GO:0008237
GO:0008270

Map