F271129

General Info

Members Datasets Scaffolds Average Seq Length
177 146 354 318

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3006425503|3006426958
Length 381
Sequence GPTGPTGPTGPTGPAGPTGPTGPTAPSHASPTPAGPAAPATTGPASPAPPGPVSRTRSQGPEPVAELTVLRKERAADGVVALTLGRPGGAPLPAWAPGAHVDLDLGDGLVRQYSLCGDPADRATWRVAVLRERDGRGGSAYVHERLAEGGRVQVRGPRNHFALEPAGRYLFVAGGIGITPLLPMVAAAEAAGADWRLLYGGRARASMAFLGELDRHGERVTVCPQDEYGLLDLAAALAEPAPGTLVYACGPEPLLAAVEQRCGESWPPGALRLERFRRADPEPADGAGPPAADEGFEVELALSGKTLRVEAGRSILETVEEAGVDVLSSCREGTCGTCETDVLEGEPDHRDVLLTEEERAAGDTMMICVSRCRGGRLVLDL

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
4 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
5 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
6 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
7 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
8 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
9 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
10 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
11 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
12 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
13 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
14 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
15 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
16 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
17 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
18 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
27 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
28 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
29 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
30 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
31 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
32 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
33 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
34 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
35 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
36 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
37 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
38 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
39 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
40 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
41 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
42 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
43 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
44 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
45 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
46 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
47 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
48 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
49 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
50 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
51 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
52 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
53 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
54 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
55 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
56 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
57 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
58 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
59 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
60 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
61 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
62 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
63 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
64 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
65 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
66 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
67 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
68 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
69 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
70 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
71 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
72 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
73 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
74 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
75 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
76 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
77 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
78 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
79 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
80 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
81 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
82 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
83 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
84 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
85 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
86 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
87 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
88 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
89 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
90 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
91 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
94 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
95 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
96 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
97 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
98 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
110 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
111 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
112 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
113 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
114 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
115 2506783011 Frankia datiscae Dg1 Isolate Nodule
116 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
117 2599185319 Pseudomonas sp. NFACC24-1 Isolate Rhizoplane
118 2599185323 Pseudomonas sp. NFACC37-1 Isolate Rhizoplane
119 2643221647 Streptomyces sp. Root369 Isolate Unclassified
120 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
121 2773857933 Frankia sp. BMG5.30 Isolate Nodule
122 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
123 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
124 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
125 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
126 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
127 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
128 2862574272 Streptomyces sp. AcE210 Isolate Nodule
129 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
130 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
131 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
132 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
133 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
134 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
135 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
136 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
137 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
138 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
139 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
140 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
141 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
142 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
143 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
144 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
145 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
146 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.66
Metatranscriptomes 1.69
Isolates 18.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.69
Nodule 2.26
Rhizoplane 2.82
Rhizosphere 73.45
Stem 0
Stem Tuber 0
Unclassified 0.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10072156 3300003320 Bacteria 7351
2 Ga0070670_100007734 3300005331 Bacteria 9141
3 Ga0070713_100012484 3300005436 Bacteria 6233
4 Ga0070711_100019311 3300005439 Bacteria 4372
5 Ga0070711_100062588 3300005439 Bacteria 2594
6 Ga0068853_100054677 3300005539 Bacteria 3441
7 Ga0068859_100000337 3300005617 Bacteria 46850
8 Ga0068859_100081843 3300005617 Bacteria 3271
9 Ga0068862_100000124 3300005844 Bacteria 89843
10 Ga0075363_100004599 3300006048 Bacteria 6056
11 Ga0097620_100000337 3300006931 Bacteria 46850
12 Ga0097620_100081841 3300006931 Bacteria 3271
13 Ga0105251_10000182 3300009011 Bacteria 63096
14 Ga0105238_10362322 3300009551 Bacteria 1439
15 Ga0105249_10001583 3300009553 Bacteria 19966
16 Ga0163162_10000398 3300013306 Bacteria 39865
17 Ga0182008_10005327 3300014497 Bacteria 7348
18 Ga0182007_10000778 3300015262 Bacteria 17793
19 Ga0163161_10000427 3300017792 Bacteria 35484
20 Ga0224712_10017010 3300022467 Bacteria 2402
21 Ga0207713_1000168 3300025735 Bacteria 95191
22 Ga0207713_1000417 3300025735 Bacteria 45375
23 Ga0207681_10055042 3300025923 Bacteria 2708
24 Ga0207650_10004890 3300025925 Bacteria 9153
25 Ga0207700_10003650 3300025928 Bacteria 8976
26 Ga0207664_10172297 3300025929 Bacteria 1853
27 Ga0207712_10005756 3300025961 Bacteria 7813
28 Ga0207639_10019389 3300026041 Bacteria 4851
29 Ga0207639_10086123 3300026041 Bacteria 2501
30 Ga0268265_10000306 3300028380 Bacteria 54682
31 Ga0307517_10155587 3300028786 Bacteria 1552
32 Ga0307508_10006664 3300031616 Bacteria 10843
33 Ga0316575_10012508 3300031665 Bacteria 3158
34 Ga0316576_10175736 3300031727 Bacteria 1615
35 Ga0316578_10070952 3300031728 Bacteria 2062
36 Ga0316577_10010352 3300031733 Bacteria 5033
37 Ga0316580_10016807 3300032139 Bacteria 2246
38 Ga0316588_1005415 3300033528 Bacteria 2485
39 Ga0316596_1008533 3300033541 Bacteria 2444
40 Ga0316574_0170232 3300035398 Bacteria 1402
41 Ga0373935_0005383 3300035692 Bacteria 7544
42 Ga0316582_0013415 3300036647 Bacteria 4610
43 Ga0316584_0045658 3300036712 Bacteria 3270
44 Ga0395900_0222644 3300037418 Bacteria 1901
45 Ga0395898_0069873 3300037466 Bacteria 3396
46 Ga0395901_0286845 3300038443 Bacteria 1709
47 Ga0439436_0017831 3300041404 Bacteria 2124
48 Ga0451797_1400433 3300041453 Bacteria 1717
49 Ga0451853_1131593 3300041512 Bacteria 5263
50 Ga0451853_2995972 3300041512 Bacteria 2150
51 Ga0439433_0010664 3300041999 Bacteria 2009
52 Ga0439448_0025847 3300042005 Bacteria 1843
53 Ga0439449_0024702 3300042007 Bacteria 2246
54 Ga0439457_001242 3300042014 Bacteria 7659
55 Ga0450898_007102 3300042134 Bacteria 1737
56 Ga0450899_006657 3300042135 Bacteria 1252
57 Ga0450903_000601 3300042138 Bacteria 7330
58 Ga0450906_003190 3300042145 Bacteria 3545
59 Ga0439458_0000244 3300042157 Bacteria 13132
60 Ga0450908_000906 3300042184 Bacteria 5706
61 Ga0466969_0001522 3300044656 Bacteria 12485
62 Ga0466969_0003813 3300044656 Bacteria 8007
63 Ga0466969_0013838 3300044656 Bacteria 4247
64 Ga0466969_0016166 3300044656 Bacteria 3908
65 Ga0466972_0001806 3300044658 Bacteria 10491
66 Ga0466972_0153258 3300044658 Bacteria 1083
67 Ga0466966_0013714 3300044684 Bacteria 5363
68 Ga0466966_0028651 3300044684 Bacteria 3625
69 Ga0466966_0088511 3300044684 Bacteria 1924
70 Ga0466961_0023803 3300044693 Bacteria 3941
71 Ga0466961_0206265 3300044693 Bacteria 1214
72 Ga0466963_0084808 3300044694 Bacteria 2150
73 Ga0466963_0341944 3300044694 Bacteria 1054
74 Ga0466971_0115700 3300044719 Bacteria 1239
75 Ga0466970_0061637 3300044765 Bacteria 2010
76 Ga0466970_0123709 3300044765 Bacteria 1418
77 Ga0466959_0005188 3300045049 Bacteria 8883
78 Ga0466959_0006152 3300045049 Bacteria 8294
79 Ga0466958_0046308 3300045836 Bacteria 2624
80 Ga0466967_0043249 3300045976 Bacteria 3899
81 Ga0466967_0447430 3300045976 Bacteria 1262
82 Ga0495592_0089204 3300046454 Bacteria 2215
83 Ga0495603_0002970 3300046455 Bacteria 10027
84 Ga0495603_0025306 3300046455 Bacteria 3589
85 Ga0495651_0001117 3300046462 Bacteria 20737
86 Ga0495650_0028101 3300046471 Bacteria 2589
87 Ga0495585_0076140 3300046492 Bacteria 1823
88 Ga0495594_0210777 3300046499 Bacteria 1108
89 Ga0495618_0126110 3300046514 Bacteria 1639
90 Ga0495628_0021395 3300046516 Bacteria 5321
91 Ga0495652_0000984 3300046529 Bacteria 32577
92 Ga0495597_0047852 3300046542 Bacteria 1893
93 Ga0495645_0084541 3300046543 Bacteria 2272
94 Ga0495611_0087079 3300046648 Bacteria 1441
95 Ga0495635_0014620 3300046663 Bacteria 5490
96 Ga0495646_0032110 3300046680 Bacteria 3268
97 Ga0495613_0013127 3300046689 Bacteria 6154
98 Ga0495589_0001319 3300046794 Bacteria 14568
99 Ga0495589_0012800 3300046794 Bacteria 4337
100 Ga0495600_0029232 3300046809 Bacteria 3568
101 Ga0495636_0004915 3300047318 Bacteria 5239
102 Ga0495636_0013921 3300047318 Bacteria 3196
103 Ga0495676_0044683 3300047321 Bacteria 3613
104 Ga0495676_0046589 3300047321 Bacteria 3516
105 Ga0495683_0018473 3300047323 Bacteria 3605
106 Ga0495685_016773 3300047447 Bacteria 2503
107 Ga0495615_0002120 3300048090 Bacteria 3116
108 Ga0496101_0177805 3300048904 Bacteria 1638
109 Ga0496117_0000354 3300048920 Bacteria 80757
110 Ga0496117_0001406 3300048920 Bacteria 34957
111 Ga0496117_0001734 3300048920 Bacteria 30187
112 Ga0496118_0005202 3300048921 Bacteria 14885
113 Ga0496118_0060376 3300048921 Bacteria 2815
114 Ga0496119_0000303 3300048922 Bacteria 68844
115 Ga0496119_0004538 3300048922 Bacteria 13774
116 Ga0496120_0000437 3300048923 Bacteria 66014
117 Ga0496121_0003173 3300048924 Bacteria 23702
118 Ga0496122_0000379 3300048925 Bacteria 95139
119 Ga0496123_0000313 3300048926 Bacteria 93165
120 Ga0496124_0000398 3300048927 Bacteria 79279
121 Ga0496124_0097445 3300048927 Bacteria 2388
122 Ga0496124_0197228 3300048927 Unclassified 1534
123 Ga0496125_0002004 3300048928 Bacteria 27613
124 Ga0496126_0001389 3300048929 Bacteria 38297
125 Ga0501031_0028245 3300049568 Bacteria 3657
126 Ga0501032_0015199 3300049569 Bacteria 5434
127 Ga0501033_0002910 3300049570 Bacteria 14330
128 Ga0501033_0020570 3300049570 Bacteria 4987
129 Ga0501034_0054602 3300049571 Bacteria 4021
130 Ga0501037_0035074 3300049573 Bacteria 3700
131 Ga0501039_0347973 3300049575 Bacteria 1165
132 Ga0501043_0008006 3300049579 Bacteria 8342
133 Ga0501046_0009101 3300049580 Bacteria 8604
134 Ga0501047_0107922 3300049581 Bacteria 2665
135 Ga0501047_0269516 3300049581 Bacteria 1549
136 Ga0501048_0027631 3300049582 Bacteria 4121
137 Ga0501035_0000193 3300049822 Bacteria 74546
138 Ga0501035_0064843 3300049822 Bacteria 3245
139 Ga0501044_0092349 3300049823 Bacteria 3052
140 nmdc:mga06z11_46457_c1 3300050494 Bacteria 2201
141 Ga0495601_0001187 3300053077 Bacteria 14248
142 Ga0495601_0036976 3300053077 Bacteria 3051
143 Ga0500573_0071600 3300053140 Bacteria 1977
144 Ga0466962_0113622 3300061719 Bacteria 1304
145 3006426958 3006425503 Bacteria 6491253
146 2506867416 2506783011 Bacteria 5323186
147 2585315341 2582581314 Bacteria 11452267
148 2600042946 2599185319 Bacteria 6637840
149 2600066232 2599185323 Bacteria 6688755
150 2644267019 2643221647 Bacteria 10741251
151 2644438063 2643221678 Bacteria 9540101
152 2774902216 2773857933 Bacteria 5818019
153 2785365848 2784746768 Bacteria 10036182
154 2786674100 2786546132 Bacteria 10419719
155 2816510718 2816332139 Bacteria 9138787
156 2831937724 2831935698 Bacteria 5963223
157 2832007017 2832004796 Bacteria 6538017
158 2862283166 2862281513 Bacteria 9621493
159 2862576768 2862574272 Bacteria 10567477
160 2863407394 2863404153 Bacteria 9672205
161 2866065193 2866065130 Bacteria 6518152
162 2867512451 2867507094 Bacteria 6506033
163 2877676795 2877676314 Bacteria 9512378
164 2880490440 2880489317 Bacteria 7096270
165 2880502078 2880495981 Bacteria 7340502
166 2954381733 2954380949 Bacteria 10050426
167 2954681312 2954673503 Bacteria 9685905
168 2954682846 2954682443 Bacteria 9862841
169 2954692566 2954691527 Bacteria 10720516
170 2954707638 2954701450 Bacteria 10834262
171 8008581974 8008574985 Bacteria 7815457
172 8047896731 8047893842 Bacteria 11723082
173 8048362191 8048356638 Bacteria 11044339
174 8048373744 8048369669 Bacteria 11666822
175 8048384484 8048379754 Bacteria 11877923
176 8054734116 8054727385 Bacteria 7558670
177 8056836010 8056829672 Bacteria 9045328
178 rootH2_10072156
179 Ga0070670_100007734
180 Ga0070713_100012484
181 Ga0070711_100019311
182 Ga0070711_100062588
183 Ga0068853_100054677
184 Ga0068859_100000337
185 Ga0068859_100081843
186 Ga0068862_100000124
187 Ga0075363_100004599
188 Ga0097620_100000337
189 Ga0097620_100081841
190 Ga0105251_10000182
191 Ga0105238_10362322
192 Ga0105249_10001583
193 Ga0163162_10000398
194 Ga0182008_10005327
195 Ga0182007_10000778
196 Ga0163161_10000427
197 Ga0224712_10017010
198 Ga0207713_1000168
199 Ga0207713_1000417
200 Ga0207681_10055042
201 Ga0207650_10004890
202 Ga0207700_10003650
203 Ga0207664_10172297
204 Ga0207712_10005756
205 Ga0207639_10019389
206 Ga0207639_10086123
207 Ga0268265_10000306
208 Ga0307517_10155587
209 Ga0307508_10006664
210 Ga0316575_10012508
211 Ga0316576_10175736
212 Ga0316578_10070952
213 Ga0316577_10010352
214 Ga0316580_10016807
215 Ga0316588_1005415
216 Ga0316596_1008533
217 Ga0316574_0170232
218 Ga0373935_0005383
219 Ga0316582_0013415
220 Ga0316584_0045658
221 Ga0395900_0222644
222 Ga0395898_0069873
223 Ga0395901_0286845
224 Ga0439436_0017831
225 Ga0451797_1400433
226 Ga0451853_1131593
227 Ga0451853_2995972
228 Ga0439433_0010664
229 Ga0439448_0025847
230 Ga0439449_0024702
231 Ga0439457_001242
232 Ga0450898_007102
233 Ga0450899_006657
234 Ga0450903_000601
235 Ga0450906_003190
236 Ga0439458_0000244
237 Ga0450908_000906
238 Ga0466969_0001522
239 Ga0466969_0003813
240 Ga0466969_0013838
241 Ga0466969_0016166
242 Ga0466972_0001806
243 Ga0466972_0153258
244 Ga0466966_0013714
245 Ga0466966_0028651
246 Ga0466966_0088511
247 Ga0466961_0023803
248 Ga0466961_0206265
249 Ga0466963_0084808
250 Ga0466963_0341944
251 Ga0466971_0115700
252 Ga0466970_0061637
253 Ga0466970_0123709
254 Ga0466959_0005188
255 Ga0466959_0006152
256 Ga0466958_0046308
257 Ga0466967_0043249
258 Ga0466967_0447430
259 Ga0495592_0089204
260 Ga0495603_0002970
261 Ga0495603_0025306
262 Ga0495651_0001117
263 Ga0495650_0028101
264 Ga0495585_0076140
265 Ga0495594_0210777
266 Ga0495618_0126110
267 Ga0495628_0021395
268 Ga0495652_0000984
269 Ga0495597_0047852
270 Ga0495645_0084541
271 Ga0495611_0087079
272 Ga0495635_0014620
273 Ga0495646_0032110
274 Ga0495613_0013127
275 Ga0495589_0001319
276 Ga0495589_0012800
277 Ga0495600_0029232
278 Ga0495636_0004915
279 Ga0495636_0013921
280 Ga0495676_0044683
281 Ga0495676_0046589
282 Ga0495683_0018473
283 Ga0495685_016773
284 Ga0495615_0002120
285 Ga0496101_0177805
286 Ga0496117_0000354
287 Ga0496117_0001406
288 Ga0496117_0001734
289 Ga0496118_0005202
290 Ga0496118_0060376
291 Ga0496119_0000303
292 Ga0496119_0004538
293 Ga0496120_0000437
294 Ga0496121_0003173
295 Ga0496122_0000379
296 Ga0496123_0000313
297 Ga0496124_0000398
298 Ga0496124_0097445
299 Ga0496124_0197228
300 Ga0496125_0002004
301 Ga0496126_0001389
302 Ga0501031_0028245
303 Ga0501032_0015199
304 Ga0501033_0002910
305 Ga0501033_0020570
306 Ga0501034_0054602
307 Ga0501037_0035074
308 Ga0501039_0347973
309 Ga0501043_0008006
310 Ga0501046_0009101
311 Ga0501047_0107922
312 Ga0501047_0269516
313 Ga0501048_0027631
314 Ga0501035_0000193
315 Ga0501035_0064843
316 Ga0501044_0092349
317 nmdc:mga06z11_46457_c1
318 Ga0495601_0001187
319 Ga0495601_0036976
320 Ga0500573_0071600
321 Ga0466962_0113622
322 3006426958
323 2506867416
324 2585315341
325 2600042946
326 2600066232
327 2644267019
328 2644438063
329 2774902216
330 2785365848
331 2786674100
332 2816510718
333 2831937724
334 2832007017
335 2862283166
336 2862576768
337 2863407394
338 2866065193
339 2867512451
340 2877676795
341 2880490440
342 2880502078
343 2954381733
344 2954681312
345 2954682846
346 2954692566
347 2954707638
348 8008581974
349 8047896731
350 8048362191
351 8048373744
352 8048384484
353 8054734116
354 8056836010

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00111

Fer2

2Fe-2S iron-sulfur cluster binding domain

298

373

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6icm-assembly1.cif.gz_D-2 pseudomonas putida cbb5 ndma with ferredoxin domain of ndmd 0.9426 222 309
6icm-assembly1.cif.gz_D-2 pseudomonas putida cbb5 ndma with ferredoxin domain of ndmd 0.9324 222 309
4n59-assembly3.cif.gz_B the crystal structure of pectocin m2 at 2.3 angstroms 0.867 222 307
4n58-assembly1.cif.gz_A crystal structure of pectocin m2 at 1.86 angstroms 0.8651 222 307
4n59-assembly3.cif.gz_A the crystal structure of pectocin m2 at 2.3 angstroms 0.8522 222 307
ID Description Score Start End Superfamily
af_P76254_226_321_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.937 218 309 3.10.20.30
2piaA03 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.9254 211 309 3.10.20.30
af_O86347_1_100_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9244 4 101 2.40.30.10
af_O86347_224_309_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.9237 221 309 3.10.20.30
2piaA03 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.9163 211 309 3.10.20.30
ID Description Score Start End GO Terms
AF-A0A645APD0-F1-model_v4 Carnitine monooxygenase reductase subunit (EC 1.14.13.-) 0.9908 221 309 GO:0004497
GO:0051537
AF-A0A5C7YIE6-F1-model_v4 2Fe-2S iron-sulfur cluster binding domain-containing protein 0.9857 223 309 GO:0051537
AF-A0A0F9BSW7-F1-model_v4 2Fe-2S ferredoxin-type domain-containing protein 0.9793 220 309 GO:0051537
AF-W1HXX4-F1-model_v4 deleted 0.9769 222 309
AF-A0A7W6BNL1-F1-model_v4 Ferredoxin 0.9689 223 309 GO:0051537

Map