F270347

General Info

Members Datasets Scaffolds Average Seq Length
177 118 354 377

Family's Representative Sequence

Representative Sequence 3300025929|Ga0207664_10094892|Ga0207664_100948923
Length 417
Sequence MPVRQPLLHPPQPGGIRVTGVADSSHLADLAGIGAVAPARPLPPFTEESERLRLEMRAWVEAELAPHAAEWERAHYFPDWVFEKCAQAGWIGLKFPKELGGGDDELAAAVWAQELARCGSGGLGAGIGAHTGIALPPVWKFGTPDQHERYLVPGIRGEKIAALGITEPDAGSDVAGIKTRARRVEGGFLVNGSKMFITNGVRADFVVTAVKTTEAGGHHGISFLIVDRGEGVSATPIEKMGWHASDTGLISFDDVFVPEENLLGPEHEGFKLIMANFQWERLMMALGAVGAMEALFERTLAFATRREQFGRPIGSNQAIRHKLAEVALALETGRAITYHALRLHLAGMNAVQEVTMAKLATQRAAFEAGDACLQIHGGAGYLEENGIARAVRDLRLGPIGGGTDEIMREILGKTLGL

Samples

Sample ID Description Type Environment
1 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
23 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
24 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
25 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
26 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
42 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
43 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
44 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
45 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
46 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
47 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
48 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
49 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
50 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
51 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
52 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
53 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
54 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
55 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
56 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
57 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
58 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
59 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
60 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
61 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
62 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
65 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
66 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
67 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
68 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
69 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
70 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
71 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
72 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
73 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
74 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
75 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
76 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
77 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
78 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
79 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
80 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
81 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
82 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
83 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
84 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
85 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
86 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
87 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
99 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
103 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
104 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
107 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
110 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
111 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
112 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
113 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
114 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
115 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
116 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
117 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
118 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.52
Nodule 0
Rhizoplane 9.04
Rhizosphere 84.18
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207664_10094892 3300025929 Bacteria 2453
2 JGI25407J50210_10015453 3300003373 Bacteria 1972
3 Ga0070683_100226805 3300005329 Bacteria 1776
4 Ga0070660_100154774 3300005339 Bacteria 1845
5 Ga0070659_100000008 3300005366 Bacteria 204009
6 Ga0070714_100003068 3300005435 Bacteria 12393
7 Ga0070714_100003642 3300005435 Bacteria 11535
8 Ga0070714_100029765 3300005435 Bacteria 4541
9 Ga0070714_100086381 3300005435 Bacteria 2741
10 Ga0070713_100325543 3300005436 Bacteria 1420
11 Ga0070710_10000010 3300005437 Bacteria 141733
12 Ga0070710_10204301 3300005437 Bacteria 1249
13 Ga0070684_100032743 3300005535 Bacteria 4433
14 Ga0070664_100222625 3300005564 Bacteria 1689
15 Ga0068856_100277091 3300005614 Bacteria 1694
16 Ga0081455_10034026 3300005937 Bacteria 4572
17 Ga0081455_10073987 3300005937 Bacteria 2815
18 Ga0081455_10109575 3300005937 Bacteria 2197
19 Ga0081538_10000034 3300005981 Bacteria 120557
20 Ga0081538_10020285 3300005981 Bacteria 4901
21 Ga0070717_10034827 3300006028 Bacteria 4072
22 Ga0070717_10109586 3300006028 Bacteria 2354
23 Ga0075365_10120077 3300006038 Bacteria 1813
24 Ga0070712_100000006 3300006175 Bacteria 161357
25 Ga0070712_100118747 3300006175 Bacteria 1986
26 Ga0070712_100119482 3300006175 Bacteria 1981
27 Ga0075367_10029977 3300006178 Bacteria 3115
28 Ga0075367_10131584 3300006178 Bacteria 1546
29 Ga0075435_100042360 3300007076 Bacteria 3642
30 Ga0111539_10031933 3300009094 Bacteria 6397
31 Ga0114129_10390058 3300009147 Bacteria 1837
32 Ga0105243_10143663 3300009148 Bacteria 2039
33 Ga0105246_10044142 3300011119 Bacteria 3028
34 Ga0157375_10013959 3300013308 Bacteria 7163
35 Ga0157380_10087271 3300014326 Bacteria 2565
36 Ga0157377_10127673 3300014745 Bacteria 1549
37 Ga0207692_10000006 3300025898 Bacteria 294686
38 Ga0207705_10125866 3300025909 Bacteria 1905
39 Ga0207693_10000078 3300025915 Bacteria 86652
40 Ga0207693_10077570 3300025915 Bacteria 2602
41 Ga0207693_10179048 3300025915 Bacteria 1668
42 Ga0207657_10003502 3300025919 Bacteria 16764
43 Ga0207657_10033629 3300025919 Bacteria 4619
44 Ga0207681_10010307 3300025923 Bacteria 5716
45 Ga0207700_10073727 3300025928 Bacteria 2637
46 Ga0207664_10000020 3300025929 Bacteria 218362
47 Ga0207664_10019968 3300025929 Bacteria 4960
48 Ga0207664_10042112 3300025929 Bacteria 3563
49 Ga0207690_10000050 3300025932 Bacteria 110472
50 Ga0207706_10153546 3300025933 Bacteria 2025
51 Ga0207689_10067325 3300025942 Bacteria 2943
52 Ga0207661_10095978 3300025944 Bacteria 2480
53 Ga0207661_10310733 3300025944 Bacteria 1415
54 Ga0207712_10245409 3300025961 Bacteria 1445
55 Ga0207668_10284445 3300025972 Bacteria 1358
56 Ga0207708_10034042 3300026075 Bacteria 3874
57 Ga0207675_100011109 3300026118 Bacteria 8437
58 Ga0207675_100418617 3300026118 Bacteria 1323
59 Ga0207698_10080652 3300026142 Bacteria 2622
60 Ga0207428_10098865 3300027907 Bacteria 2257
61 Ga0265334_10000003 3300028573 Bacteria 244354
62 Ga0265336_10000848 3300028666 Bacteria 15913
63 Ga0265338_10003904 3300028800 Bacteria 20589
64 Ga0373937_0093198 3300036401 Bacteria 2792
65 Ga0436365_0810704 3300039437 Bacteria 1510
66 Ga0436363_0747952 3300039450 Bacteria 1384
67 Ga0436363_0902037 3300039450 Bacteria 1268
68 Ga0436362_0322434 3300039453 Bacteria 2049
69 Ga0451847_0529639 3300041503 Bacteria 1027
70 Ga0439440_0003031 3300042993 Bacteria 3202
71 Ga0466969_0025865 3300044656 Bacteria 3014
72 Ga0466969_0033341 3300044656 Bacteria 2615
73 Ga0466969_0049702 3300044656 Bacteria 2068
74 Ga0466965_0043494 3300044683 Bacteria 2218
75 Ga0466966_0028925 3300044684 Bacteria 3608
76 Ga0466966_0032064 3300044684 Bacteria 3408
77 Ga0466966_0038968 3300044684 Bacteria 3061
78 Ga0466966_0058128 3300044684 Bacteria 2445
79 Ga0466961_0004775 3300044693 Bacteria 8533
80 Ga0466961_0005535 3300044693 Bacteria 7967
81 Ga0466961_0027630 3300044693 Bacteria 3650
82 Ga0466963_0017310 3300044694 Bacteria 4492
83 Ga0466963_0047301 3300044694 Bacteria 2839
84 Ga0466963_0206322 3300044694 Bacteria 1374
85 Ga0466971_0002588 3300044719 Bacteria 7649
86 Ga0466971_0062317 3300044719 Bacteria 1687
87 Ga0466968_0018609 3300044735 Bacteria 2788
88 Ga0466968_0047379 3300044735 Bacteria 1828
89 Ga0466970_0038066 3300044765 Bacteria 2551
90 Ga0466957_0033338 3300044842 Bacteria 3090
91 Ga0466957_0077930 3300044842 Bacteria 2060
92 Ga0466957_0137395 3300044842 Bacteria 1572
93 Ga0466960_0030707 3300044901 Bacteria 2475
94 Ga0466959_0003086 3300045049 Bacteria 10794
95 Ga0466959_0011229 3300045049 Bacteria 6427
96 Ga0466959_0012336 3300045049 Bacteria 6172
97 Ga0466959_0095435 3300045049 Bacteria 2133
98 Ga0466959_0171933 3300045049 Bacteria 1519
99 Ga0466958_0001387 3300045836 Bacteria 11462
100 Ga0466958_0010860 3300045836 Bacteria 5113
101 Ga0466958_0011792 3300045836 Bacteria 4934
102 Ga0466958_0012615 3300045836 Bacteria 4790
103 Ga0466958_0028910 3300045836 Bacteria 3289
104 Ga0466958_0047276 3300045836 Bacteria 2598
105 Ga0466958_0061048 3300045836 Bacteria 2295
106 Ga0466958_0102757 3300045836 Bacteria 1779
107 Ga0466958_0191853 3300045836 Bacteria 1299
108 Ga0466967_0001141 3300045976 Bacteria 14830
109 Ga0466967_0126718 3300045976 Bacteria 2366
110 Ga0495651_0123243 3300046462 Bacteria 1901
111 Ga0495653_0171781 3300046463 Bacteria 1496
112 Ga0495608_0019368 3300046511 Bacteria 4684
113 Ga0495640_0074883 3300046533 Bacteria 2262
114 Ga0495587_0040264 3300046536 Bacteria 2794
115 Ga0495667_0007162 3300046559 Bacteria 7567
116 Ga0495656_0023756 3300046615 Bacteria 2415
117 Ga0495668_0046537 3300046616 Bacteria 2410
118 Ga0495635_0051364 3300046663 Bacteria 2841
119 Ga0495657_0127326 3300046675 Bacteria 1598
120 Ga0495589_0075300 3300046794 Bacteria 1646
121 Ga0495600_0140749 3300046809 Bacteria 1565
122 Ga0495604_0011981 3300047317 Bacteria 6893
123 Ga0495680_0097968 3300047322 Bacteria 2188
124 Ga0495686_0013831 3300047472 Bacteria 5587
125 Ga0496101_0048699 3300048904 Bacteria 3046
126 Ga0496105_0114179 3300048908 Bacteria 2228
127 Ga0496105_0246952 3300048908 Bacteria 1447
128 Ga0496109_0008204 3300048912 Bacteria 8861
129 Ga0496109_0204102 3300048912 Bacteria 1858
130 Ga0496110_0019611 3300048913 Bacteria 5694
131 Ga0496110_0065326 3300048913 Bacteria 3216
132 Ga0496110_0291717 3300048913 Bacteria 1486
133 Ga0496111_0270643 3300048914 Bacteria 1260
134 Ga0496112_0000209 3300048915 Bacteria 38008
135 Ga0496112_0019224 3300048915 Bacteria 6443
136 Ga0496112_0455142 3300048915 Bacteria 1217
137 Ga0496113_0046098 3300048916 Bacteria 3236
138 Ga0496113_0106835 3300048916 Bacteria 2174
139 Ga0496113_0114667 3300048916 Bacteria 2101
140 Ga0496114_0215457 3300048917 Bacteria 1685
141 Ga0501031_0016422 3300049568 Bacteria 4808
142 Ga0501032_0029342 3300049569 Bacteria 3774
143 Ga0501033_0010185 3300049570 Bacteria 7219
144 Ga0501034_0051399 3300049571 Bacteria 4155
145 Ga0501034_0296435 3300049571 Bacteria 1554
146 Ga0501037_0014758 3300049573 Bacteria 5746
147 Ga0501038_0015133 3300049574 Bacteria 7018
148 Ga0501039_0005065 3300049575 Bacteria 9992
149 Ga0501043_0028826 3300049579 Bacteria 4358
150 Ga0501046_0010400 3300049580 Bacteria 7994
151 Ga0501047_0210376 3300049581 Bacteria 1803
152 Ga0501048_0035814 3300049582 Bacteria 3569
153 Ga0501068_0046241 3300049584 Bacteria 2624
154 Ga0501069_0017016 3300049585 Bacteria 3908
155 Ga0501070_0014772 3300049586 Bacteria 6569
156 Ga0501072_0142103 3300049588 Bacteria 1914
157 Ga0501073_0011162 3300049589 Bacteria 6569
158 Ga0501074_0102942 3300049590 Bacteria 2044
159 Ga0501079_0027525 3300049741 Bacteria 4360
160 Ga0501080_0037625 3300049742 Bacteria 4519
161 Ga0501080_0119908 3300049742 Bacteria 2438
162 Ga0501083_0013909 3300049744 Bacteria 5626
163 Ga0501083_0077785 3300049744 Bacteria 2201
164 Ga0501035_0045060 3300049822 Bacteria 3969
165 Ga0501044_0056694 3300049823 Bacteria 4022
166 Ga0501045_0063331 3300049824 Bacteria 2714
167 nmdc:mga03n38_10935_c1 3300050490 Bacteria 3363
168 nmdc:mga00v17_11641_c1 3300050491 Bacteria 4837
169 nmdc:mga08y16_8040_c1 3300050511 Bacteria 11035
170 nmdc:mga0a205_34418_c1 3300050515 Bacteria 4860
171 Ga0500556_0001161 3300053104 Bacteria 12688
172 Ga0500616_0010376 3300053153 Bacteria 5576
173 Ga0500599_001152 3300053736 Bacteria 2995
174 Ga0501082_0009511 3300060353 Bacteria 8366
175 Ga0501082_0164211 3300060353 Bacteria 1930
176 Ga0466962_0005339 3300061719 Bacteria 6175
177 Ga0466962_0021862 3300061719 Bacteria 3071
178 Ga0207664_10094892
179 JGI25407J50210_10015453
180 Ga0070683_100226805
181 Ga0070660_100154774
182 Ga0070659_100000008
183 Ga0070714_100003068
184 Ga0070714_100003642
185 Ga0070714_100029765
186 Ga0070714_100086381
187 Ga0070713_100325543
188 Ga0070710_10000010
189 Ga0070710_10204301
190 Ga0070684_100032743
191 Ga0070664_100222625
192 Ga0068856_100277091
193 Ga0081455_10034026
194 Ga0081455_10073987
195 Ga0081455_10109575
196 Ga0081538_10000034
197 Ga0081538_10020285
198 Ga0070717_10034827
199 Ga0070717_10109586
200 Ga0075365_10120077
201 Ga0070712_100000006
202 Ga0070712_100118747
203 Ga0070712_100119482
204 Ga0075367_10029977
205 Ga0075367_10131584
206 Ga0075435_100042360
207 Ga0111539_10031933
208 Ga0114129_10390058
209 Ga0105243_10143663
210 Ga0105246_10044142
211 Ga0157375_10013959
212 Ga0157380_10087271
213 Ga0157377_10127673
214 Ga0207692_10000006
215 Ga0207705_10125866
216 Ga0207693_10000078
217 Ga0207693_10077570
218 Ga0207693_10179048
219 Ga0207657_10003502
220 Ga0207657_10033629
221 Ga0207681_10010307
222 Ga0207700_10073727
223 Ga0207664_10000020
224 Ga0207664_10019968
225 Ga0207664_10042112
226 Ga0207690_10000050
227 Ga0207706_10153546
228 Ga0207689_10067325
229 Ga0207661_10095978
230 Ga0207661_10310733
231 Ga0207712_10245409
232 Ga0207668_10284445
233 Ga0207708_10034042
234 Ga0207675_100011109
235 Ga0207675_100418617
236 Ga0207698_10080652
237 Ga0207428_10098865
238 Ga0265334_10000003
239 Ga0265336_10000848
240 Ga0265338_10003904
241 Ga0373937_0093198
242 Ga0436365_0810704
243 Ga0436363_0747952
244 Ga0436363_0902037
245 Ga0436362_0322434
246 Ga0451847_0529639
247 Ga0439440_0003031
248 Ga0466969_0025865
249 Ga0466969_0033341
250 Ga0466969_0049702
251 Ga0466965_0043494
252 Ga0466966_0028925
253 Ga0466966_0032064
254 Ga0466966_0038968
255 Ga0466966_0058128
256 Ga0466961_0004775
257 Ga0466961_0005535
258 Ga0466961_0027630
259 Ga0466963_0017310
260 Ga0466963_0047301
261 Ga0466963_0206322
262 Ga0466971_0002588
263 Ga0466971_0062317
264 Ga0466968_0018609
265 Ga0466968_0047379
266 Ga0466970_0038066
267 Ga0466957_0033338
268 Ga0466957_0077930
269 Ga0466957_0137395
270 Ga0466960_0030707
271 Ga0466959_0003086
272 Ga0466959_0011229
273 Ga0466959_0012336
274 Ga0466959_0095435
275 Ga0466959_0171933
276 Ga0466958_0001387
277 Ga0466958_0010860
278 Ga0466958_0011792
279 Ga0466958_0012615
280 Ga0466958_0028910
281 Ga0466958_0047276
282 Ga0466958_0061048
283 Ga0466958_0102757
284 Ga0466958_0191853
285 Ga0466967_0001141
286 Ga0466967_0126718
287 Ga0495651_0123243
288 Ga0495653_0171781
289 Ga0495608_0019368
290 Ga0495640_0074883
291 Ga0495587_0040264
292 Ga0495667_0007162
293 Ga0495656_0023756
294 Ga0495668_0046537
295 Ga0495635_0051364
296 Ga0495657_0127326
297 Ga0495589_0075300
298 Ga0495600_0140749
299 Ga0495604_0011981
300 Ga0495680_0097968
301 Ga0495686_0013831
302 Ga0496101_0048699
303 Ga0496105_0114179
304 Ga0496105_0246952
305 Ga0496109_0008204
306 Ga0496109_0204102
307 Ga0496110_0019611
308 Ga0496110_0065326
309 Ga0496110_0291717
310 Ga0496111_0270643
311 Ga0496112_0000209
312 Ga0496112_0019224
313 Ga0496112_0455142
314 Ga0496113_0046098
315 Ga0496113_0106835
316 Ga0496113_0114667
317 Ga0496114_0215457
318 Ga0501031_0016422
319 Ga0501032_0029342
320 Ga0501033_0010185
321 Ga0501034_0051399
322 Ga0501034_0296435
323 Ga0501037_0014758
324 Ga0501038_0015133
325 Ga0501039_0005065
326 Ga0501043_0028826
327 Ga0501046_0010400
328 Ga0501047_0210376
329 Ga0501048_0035814
330 Ga0501068_0046241
331 Ga0501069_0017016
332 Ga0501070_0014772
333 Ga0501072_0142103
334 Ga0501073_0011162
335 Ga0501074_0102942
336 Ga0501079_0027525
337 Ga0501080_0037625
338 Ga0501080_0119908
339 Ga0501083_0013909
340 Ga0501083_0077785
341 Ga0501035_0045060
342 Ga0501044_0056694
343 Ga0501045_0063331
344 nmdc:mga03n38_10935_c1
345 nmdc:mga00v17_11641_c1
346 nmdc:mga08y16_8040_c1
347 nmdc:mga0a205_34418_c1
348 Ga0500556_0001161
349 Ga0500616_0010376
350 Ga0500599_001152
351 Ga0501082_0009511
352 Ga0501082_0164211
353 Ga0466962_0005339
354 Ga0466962_0021862

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

267

416

0.99

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

46

158

0.96

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

282

399

0.93

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

162

255

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3r7k-assembly1.cif.gz_D crystal structure of a probable acyl coa dehydrogenase from mycobacterium abscessus atcc 19977 / dsm 44196 0.9631 17 386
1ivh-assembly1.cif.gz_B structure of human isovaleryl-coa dehydrogenase at 2.6 angstroms resolution: structural basis for substrate specificity 0.9589 15 387
2pg0-assembly1.cif.gz_A crystal structure of acyl-coa dehydrogenase from geobacillus kaustophilus 0.9574 12 388
3oib-assembly1.cif.gz_A crystal structure of a putative acyl-coa dehydrogenase from mycobacterium smegmatis, iodide soak 0.9564 16 387
5lnx-assembly2.cif.gz_G crystal structure of mmgc, an acyl-coa dehydrogenase from bacillus subtilis. 0.9514 22 386
ID Description Score Start End Superfamily
af_P96397_240_357_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9647 246 358 1.20.140.10
af_A0A0K3AQR2_269_362_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9595 246 333 1.20.140.10
af_O33229_243_386_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9537 246 388 1.20.140.10
6fahD03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9537 250 386 1.20.140.10
af_P28330_285_428_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9524 246 388 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A357RNQ1-F1-model_v4 deleted 0.9808 242 333
AF-N8YKB8-F1-model_v4 Acyl-CoA dehydrogenase 0.9709 16 387 GO:0003995
GO:0005737
GO:0033539
GO:0050660
AF-A0A1H4XSY0-F1-model_v4 Acyl-[acyl-carrier-protein] dehydrogenase MbtN (Mycobactin synthase protein N) 0.9656 16 388 GO:0003995
GO:0005737
GO:0033539
GO:0050660
AF-A0A333W808-F1-model_v4 Acyl-CoA dehydrogenase (EC 1.3.8.1) 0.9654 16 387 GO:0005737
GO:0016937
GO:0033539
GO:0050660
AF-A0A0Q8X651-F1-model_v4 Acyl-CoA dehydrogenase 0.9654 16 388 GO:0003995
GO:0050660

Map