F270280

General Info

Members Datasets Scaffolds Average Seq Length
177 131 354 812

Family's Representative Sequence

Representative Sequence 3300017792|Ga0163161_10000424|Ga0163161_1000042424
Length 858
Sequence VNVLRTTLAVPNVNSMNPNLICQRRRLRGRSAAVQLLLLCILLCPAVSFAQEKTRLNTNWEFLKGDLGGIWEAVRPFKAGGSETVPLWEKVNLPHCFNATDAVDPDLNYYEGPGWYRTQLSIQDRYPKGRTLLHFEGAGQKTSVYIYDKKVGEHVGGYDEWTVDITDAVAEFRKTAVYKQQFNEKIPLSVRCDNSRDLEMIPSDLSDFNVYGGIYRYLNLVYVPEISASQVFAKATVDADGKNGKISISANWYHPHRIADAQLRVTLKDPQGKTVKNWKGSLKYLKEAASSPQAESGQQQIWETGILKPQLWSPDKPLLYTLTLSTTVDGQTSIHTEKLGFRNFEFVTKGPFLLNGKRLLLKGTHRHEDHAGVAAAMTAGMIRTEMKMMKEMGVNFIRLGHYQQSRIVLDLCDSLGILVWEEIPWCRGGLGGEVYQAQAKRMLSNMIQQHYNHPAVIIWGLGNENDWPGDFKTFDEQKIRAFLKELNDLSHRLDPSRKTAIRRCDFAKDIVDVYSPSIWAGWYRGIYTEYADAAREEFNKVDHFIHMEWGGDSHAGRHSETPDKALSLVKTGSGADERAGDASLYGGGARVSKDGDWSESYLSNLIDWHLKEQEKMPWLTGSAYWPFKDFSTPVRPENPVPYMNQKGVVERDFKKKESYYVFQSYWTSKPMAHIYGHSWPVRWGDAKELKMVKVYSNCDEAELFVNGKSQGLKKRDSQDFPAAGLRWMVNYQEGNNEIRVVAAKGKQKVTDQLTQIYQTAKWGKPVKMTLTKIAGNADTTTIEVKLFDAEQVLCLDASQYVTFGYTGEGKLIDNQGTSAGSRKVQLYNGRAVISIQKSKGKGVASVKSEGLATALLEL

Samples

Sample ID Description Type Environment
1 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
6 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
30 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
37 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
38 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
39 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
40 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
41 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
42 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
44 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
45 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
56 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
57 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
58 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
59 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
63 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
66 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
67 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
68 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
69 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
70 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
71 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
72 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
73 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
74 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
78 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
79 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
80 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
81 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
82 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
83 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
84 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
85 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
86 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
87 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
88 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
89 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
90 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
91 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
92 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
93 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
94 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
95 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
96 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
99 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
100 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
101 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
102 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
103 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
104 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
105 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
106 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
107 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
108 2738541283 Pedobacter sp. OK701 Isolate Unclassified
109 2738541284 Pedobacter sp. YR016 Isolate Unclassified
110 2738543023 Pedobacter sp. OK628 Isolate Unclassified
111 2739367651 Pedobacter sp. OK291 Isolate Unclassified
112 2739367656 Pedobacter sp. CF523 Isolate Unclassified
113 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
114 2818991444 Filimonas endophytica 3197 Isolate Unclassified
115 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
116 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
117 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
118 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
119 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
120 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
121 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
122 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
123 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
124 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
125 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
126 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
127 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
128 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
129 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
130 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
131 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 84.75
Metatranscriptomes 0
Isolates 15.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.3
Nodule 0
Rhizoplane 0.56
Rhizosphere 74.01
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163161_10000424 3300017792 Bacteria 35586
2 SwRhRL2b_contig_3434072 2162886007 Bacteria 11355
3 JGI24739J22299_10000730 3300001989 Bacteria 11919
4 JGI24751J29686_10001501 3300002459 Bacteria 4851
5 JGI25152J39213_1000128 3300002773 Bacteria 51965
6 JGI25150J39212_1000021 3300002774 Bacteria 133190
7 JGI25151J46595_10000078 3300003187 Bacteria 133190
8 JGI25153J46596_10000057 3300003215 Bacteria 133190
9 rootL2_10256416 3300003322 Bacteria 6187
10 rootH1_10038624 3300003323 Bacteria 7924
11 Ga0055536_1000009 3300003781 Bacteria 311572
12 Ga0065714_10004010 3300005288 Bacteria 21481
13 Ga0065714_10004794 3300005288 Bacteria 6071
14 Ga0065704_10000214 3300005289 Bacteria 119751
15 Ga0065704_10082149 3300005289 Bacteria 3639
16 Ga0070658_10000926 3300005327 Bacteria 25076
17 Ga0070680_100001555 3300005336 Bacteria 16760
18 Ga0070691_10019746 3300005341 Bacteria 3111
19 Ga0070679_100017580 3300005530 Bacteria 6922
20 Ga0070679_100040369 3300005530 Bacteria 4643
21 Ga0070684_100044228 3300005535 Bacteria 3850
22 Ga0068853_100011936 3300005539 Bacteria 7065
23 Ga0068855_100008106 3300005563 Bacteria 12695
24 Ga0068855_100022014 3300005563 Bacteria 7644
25 Ga0068855_100037199 3300005563 Bacteria 5790
26 Ga0075366_10003998 3300006195 Bacteria 7880
27 Ga0105240_10023073 3300009093 Bacteria 8241
28 Ga0114129_10001614 3300009147 Bacteria 30617
29 Ga0105243_10000004 3300009148 Bacteria 601266
30 Ga0105241_10002033 3300009174 Bacteria 15305
31 Ga0105237_10000061 3300009545 Bacteria 146107
32 Ga0105237_10003906 3300009545 Bacteria 17475
33 Ga0105249_10005298 3300009553 Bacteria 11138
34 Ga0105239_10000679 3300010375 Bacteria 48522
35 Ga0105239_10001893 3300010375 Bacteria 27361
36 Ga0157373_10000188 3300013100 Bacteria 50875
37 Ga0157373_10001903 3300013100 Bacteria 15849
38 Ga0157373_10036434 3300013100 Bacteria 3531
39 Ga0157371_10001445 3300013102 Bacteria 24641
40 Ga0157371_10001763 3300013102 Bacteria 21923
41 Ga0157371_10003076 3300013102 Bacteria 15476
42 Ga0157371_10003569 3300013102 Bacteria 14023
43 Ga0157371_10006349 3300013102 Bacteria 9775
44 Ga0157371_10030135 3300013102 Bacteria 3915
45 Ga0157370_10002273 3300013104 Bacteria 23305
46 Ga0157370_10002723 3300013104 Bacteria 21143
47 Ga0157370_10004377 3300013104 Bacteria 16218
48 Ga0157370_10008702 3300013104 Bacteria 10923
49 Ga0157370_10011711 3300013104 Bacteria 9155
50 Ga0157369_10000002 3300013105 Bacteria 524510
51 Ga0157369_10000439 3300013105 Bacteria 55404
52 Ga0157372_10000087 3300013307 Bacteria 95840
53 Ga0157372_10000449 3300013307 Bacteria 45309
54 Ga0157372_10003044 3300013307 Bacteria 18067
55 Ga0157372_10055019 3300013307 Bacteria 4442
56 Ga0157372_10073325 3300013307 Bacteria 3859
57 Ga0157372_10087277 3300013307 Bacteria 3539
58 Ga0157375_10035215 3300013308 Bacteria 4777
59 Ga0182008_10001461 3300014497 Bacteria 15794
60 Ga0182006_1001691 3300015261 Bacteria 12905
61 Ga0182007_10000001 3300015262 Bacteria 1127301
62 Ga0163161_10000108 3300017792 Bacteria 78805
63 Ga0163161_10000138 3300017792 Bacteria 68614
64 Ga0163161_10000814 3300017792 Bacteria 24471
65 Ga0209437_100041 3300025233 Bacteria 444465
66 Ga0207425_1000004 3300025245 Bacteria 1092421
67 Ga0209026_1000258 3300025250 Bacteria 65976
68 Ga0209129_1000048 3300025258 Bacteria 270192
69 Ga0209676_1000001 3300025292 Bacteria 1852142
70 Ga0209025_1000009 3300025294 Bacteria 1092561
71 Ga0209758_1000010 3300025297 Bacteria 1092782
72 Ga0209050_1000018 3300025298 Bacteria 723263
73 Ga0207705_10000494 3300025909 Bacteria 33635
74 Ga0207707_10000449 3300025912 Bacteria 42875
75 Ga0207671_10003045 3300025914 Bacteria 17161
76 Ga0207671_10003416 3300025914 Bacteria 15871
77 Ga0207652_10000043 3300025921 Bacteria 128581
78 Ga0207709_10000010 3300025935 Bacteria 601305
79 Ga0207667_10001665 3300025949 Bacteria 27992
80 Ga0207667_10004106 3300025949 Bacteria 17891
81 Ga0207667_10086853 3300025949 Bacteria 3236
82 Ga0207712_10010143 3300025961 Bacteria 5974
83 Ga0207676_10020741 3300026095 Bacteria 4812
84 Ga0207674_10077454 3300026116 Bacteria 3331
85 Ga0307517_10000129 3300028786 Bacteria 114359
86 Ga0307515_10000069 3300028794 Bacteria 240743
87 Ga0307515_10002950 3300028794 Bacteria 36073
88 Ga0316176_1029193 3300030732 Bacteria 11200
89 Ga0316183_1025751 3300030742 Bacteria 35611
90 Ga0316182_1138364 3300030745 Bacteria 5409
91 Ga0307408_100001844 3300031548 Bacteria 15438
92 Ga0307408_100002443 3300031548 Bacteria 13053
93 Ga0307405_10000031 3300031731 Bacteria 99176
94 Ga0307407_10000036 3300031903 Bacteria 76457
95 Ga0307412_10000026 3300031911 Bacteria 228930
96 Ga0307416_100000007 3300032002 Bacteria 433284
97 Ga0307416_100065504 3300032002 Bacteria 2986
98 Ga0307414_10001676 3300032004 Bacteria 11519
99 Ga0307510_10000107 3300033180 Bacteria 65945
100 Ga0395899_0000204 3300037312 Bacteria 87147
101 Ga0395899_0032422 3300037312 Bacteria 3924
102 Ga0395900_0041617 3300037418 Bacteria 4736
103 Ga0395898_0013560 3300037466 Bacteria 8389
104 Ga0439457_000976 3300042014 Bacteria 8607
105 Ga0451577_0000015 3300042876 Bacteria 538333
106 Ga0451577_0011613 3300042876 Bacteria 8318
107 Ga0466972_0000558 3300044658 Bacteria 18208
108 Ga0453683_0000143 3300044673 Bacteria 104632
109 Ga0453683_0010582 3300044673 Bacteria 6108
110 Ga0466961_0034985 3300044693 Bacteria 3225
111 Ga0453684_0000081 3300044712 Bacteria 402985
112 Ga0453684_0000651 3300044712 Bacteria 125123
113 Ga0451576_0000080 3300045051 Bacteria 242782
114 Ga0451576_0000294 3300045051 Bacteria 122276
115 Ga0495650_0000003 3300046471 Bacteria 900730
116 Ga0495585_0000585 3300046492 Bacteria 34224
117 Ga0495585_0000677 3300046492 Bacteria 31155
118 Ga0495606_0000002 3300046507 Bacteria 554637
119 Ga0495610_0000064 3300046512 Bacteria 125922
120 Ga0495616_0007388 3300046513 Bacteria 6574
121 Ga0495648_0011391 3300046524 Bacteria 6700
122 Ga0495609_0002668 3300046538 Bacteria 10806
123 Ga0495633_0000388 3300046558 Bacteria 46365
124 Ga0495668_0000127 3300046616 Bacteria 114097
125 Ga0495668_0004857 3300046616 Bacteria 9343
126 Ga0495625_0000005 3300046660 Bacteria 596135
127 Ga0495625_0000691 3300046660 Bacteria 48010
128 Ga0495625_0001121 3300046660 Bacteria 34662
129 Ga0495625_0015538 3300046660 Bacteria 6027
130 Ga0495625_0061908 3300046660 Bacteria 2646
131 Ga0495661_0002222 3300046665 Bacteria 15090
132 Ga0495649_0000003 3300046694 Bacteria 880817
133 Ga0495686_0000454 3300047472 Bacteria 61738
134 Ga0496116_0002188 3300048919 Bacteria 20824
135 Ga0496122_0000435 3300048925 Bacteria 87533
136 Ga0496124_0008528 3300048927 Bacteria 10699
137 Ga0501300_000127 3300049523 Bacteria 11249
138 Ga0501257_003229 3300049686 Bacteria 3481
139 Ga0501241_002328 3300049758 Bacteria 3684
140 Ga0501264_000022 3300049761 Bacteria 24436
141 Ga0501044_0005643 3300049823 Bacteria 13896
142 Ga0501044_0012507 3300049823 Bacteria 9190
143 nmdc:mga05p37_3198_c1 3300050507 Bacteria 19062
144 Ga0500651_0000983 3300053093 Bacteria 14036
145 Ga0500562_000018 3300053108 Bacteria 126890
146 Ga0500608_001566 3300053122 Bacteria 8207
147 Ga0500618_000036 3300053125 Bacteria 118803
148 Ga0500622_0000114 3300053156 Bacteria 83162
149 Ga0500622_0002591 3300053156 Bacteria 12881
150 Ga0500611_000066 3300053727 Bacteria 42948
151 2586206911 2585427687 Bacteria 5544917
152 2599477906 2599185184 Bacteria 6430550
153 2722727555 2721755487 Bacteria 6357185
154 2738757425 2738541283 Bacteria 7222293
155 2738762487 2738541284 Bacteria 5199923
156 2739300059 2738543023 Bacteria 6767879
157 2739588980 2739367651 Bacteria 6359826
158 2739614110 2739367656 Bacteria 5152243
159 2776614065 2775506987 Bacteria 5373360
160 2819585859 2818991444 Bacteria 6968812
161 2842726407 2842722452 Bacteria 6263924
162 2842907107 2842903701 Bacteria 6986368
163 2842910657 2842909656 Bacteria 6185908
164 2849284582 2849281842 Bacteria 6065644
165 2852628772 2852627209 Bacteria 5896285
166 2896089353 2896085136 Bacteria 6129793
167 2896111104 2896109856 Bacteria 7140722
168 2902051448 2902048731 Bacteria 4976191
169 2919186381 2919186247 Bacteria 6244071
170 2919439153 2919437846 Bacteria 6199444
171 2928079868 2928078545 Bacteria 6534839
172 2928147679 2928147474 Bacteria 6512076
173 2929159399 2929154850 Bacteria 6753285
174 2939666349 2939664404 Bacteria 6364494
175 2946000976 2945997725 Bacteria 6404843
176 2954018226 2954016120 Bacteria 6446024
177 2977232927 2977232053 Bacteria 5485925
178 Ga0163161_10000424
179 SwRhRL2b_contig_3434072
180 JGI24739J22299_10000730
181 JGI24751J29686_10001501
182 JGI25152J39213_1000128
183 JGI25150J39212_1000021
184 JGI25151J46595_10000078
185 JGI25153J46596_10000057
186 rootL2_10256416
187 rootH1_10038624
188 Ga0055536_1000009
189 Ga0065714_10004010
190 Ga0065714_10004794
191 Ga0065704_10000214
192 Ga0065704_10082149
193 Ga0070658_10000926
194 Ga0070680_100001555
195 Ga0070691_10019746
196 Ga0070679_100017580
197 Ga0070679_100040369
198 Ga0070684_100044228
199 Ga0068853_100011936
200 Ga0068855_100008106
201 Ga0068855_100022014
202 Ga0068855_100037199
203 Ga0075366_10003998
204 Ga0105240_10023073
205 Ga0114129_10001614
206 Ga0105243_10000004
207 Ga0105241_10002033
208 Ga0105237_10000061
209 Ga0105237_10003906
210 Ga0105249_10005298
211 Ga0105239_10000679
212 Ga0105239_10001893
213 Ga0157373_10000188
214 Ga0157373_10001903
215 Ga0157373_10036434
216 Ga0157371_10001445
217 Ga0157371_10001763
218 Ga0157371_10003076
219 Ga0157371_10003569
220 Ga0157371_10006349
221 Ga0157371_10030135
222 Ga0157370_10002273
223 Ga0157370_10002723
224 Ga0157370_10004377
225 Ga0157370_10008702
226 Ga0157370_10011711
227 Ga0157369_10000002
228 Ga0157369_10000439
229 Ga0157372_10000087
230 Ga0157372_10000449
231 Ga0157372_10003044
232 Ga0157372_10055019
233 Ga0157372_10073325
234 Ga0157372_10087277
235 Ga0157375_10035215
236 Ga0182008_10001461
237 Ga0182006_1001691
238 Ga0182007_10000001
239 Ga0163161_10000108
240 Ga0163161_10000138
241 Ga0163161_10000814
242 Ga0209437_100041
243 Ga0207425_1000004
244 Ga0209026_1000258
245 Ga0209129_1000048
246 Ga0209676_1000001
247 Ga0209025_1000009
248 Ga0209758_1000010
249 Ga0209050_1000018
250 Ga0207705_10000494
251 Ga0207707_10000449
252 Ga0207671_10003045
253 Ga0207671_10003416
254 Ga0207652_10000043
255 Ga0207709_10000010
256 Ga0207667_10001665
257 Ga0207667_10004106
258 Ga0207667_10086853
259 Ga0207712_10010143
260 Ga0207676_10020741
261 Ga0207674_10077454
262 Ga0307517_10000129
263 Ga0307515_10000069
264 Ga0307515_10002950
265 Ga0316176_1029193
266 Ga0316183_1025751
267 Ga0316182_1138364
268 Ga0307408_100001844
269 Ga0307408_100002443
270 Ga0307405_10000031
271 Ga0307407_10000036
272 Ga0307412_10000026
273 Ga0307416_100000007
274 Ga0307416_100065504
275 Ga0307414_10001676
276 Ga0307510_10000107
277 Ga0395899_0000204
278 Ga0395899_0032422
279 Ga0395900_0041617
280 Ga0395898_0013560
281 Ga0439457_000976
282 Ga0451577_0000015
283 Ga0451577_0011613
284 Ga0466972_0000558
285 Ga0453683_0000143
286 Ga0453683_0010582
287 Ga0466961_0034985
288 Ga0453684_0000081
289 Ga0453684_0000651
290 Ga0451576_0000080
291 Ga0451576_0000294
292 Ga0495650_0000003
293 Ga0495585_0000585
294 Ga0495585_0000677
295 Ga0495606_0000002
296 Ga0495610_0000064
297 Ga0495616_0007388
298 Ga0495648_0011391
299 Ga0495609_0002668
300 Ga0495633_0000388
301 Ga0495668_0000127
302 Ga0495668_0004857
303 Ga0495625_0000005
304 Ga0495625_0000691
305 Ga0495625_0001121
306 Ga0495625_0015538
307 Ga0495625_0061908
308 Ga0495661_0002222
309 Ga0495649_0000003
310 Ga0495686_0000454
311 Ga0496116_0002188
312 Ga0496122_0000435
313 Ga0496124_0008528
314 Ga0501300_000127
315 Ga0501257_003229
316 Ga0501241_002328
317 Ga0501264_000022
318 Ga0501044_0005643
319 Ga0501044_0012507
320 nmdc:mga05p37_3198_c1
321 Ga0500651_0000983
322 Ga0500562_000018
323 Ga0500608_001566
324 Ga0500618_000036
325 Ga0500622_0000114
326 Ga0500622_0002591
327 Ga0500611_000066
328 2586206911
329 2599477906
330 2722727555
331 2738757425
332 2738762487
333 2739300059
334 2739588980
335 2739614110
336 2776614065
337 2819585859
338 2842726407
339 2842907107
340 2842910657
341 2849284582
342 2852628772
343 2896089353
344 2896111104
345 2902051448
346 2919186381
347 2919439153
348 2928079868
349 2928147679
350 2929159399
351 2939666349
352 2946000976
353 2954018226
354 2977232927

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16355

DUF4982

Domain of unknown function (DUF4982)

687

750

0.89

PF00703

Glyco_hydro_2

Glycosyl hydrolases family 2

225

342

0.86

PF02837

Glyco_hydro_2_N

Glycosyl hydrolases family 2, sugar binding domain

76

224

0.84

PF02836

Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

346

669

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6dxu-assembly1.cif.gz_A crystal structure of parabacteroides merdae beta-glucuronidase (gus) 0.9634 23 794
6d7j-assembly3.cif.gz_D the crystal structure of parabacteroides merdae beta-glucuronidase (gus) with glycerol in active-site 0.9601 23 794
6d7j-assembly1.cif.gz_C the crystal structure of parabacteroides merdae beta-glucuronidase (gus) with glycerol in active-site 0.9584 23 794
6d1p-assembly1.cif.gz_A apo structure of bacteroides uniformis beta-glucuronidase 3 0.9537 23 794
6d1p-assembly1.cif.gz_B apo structure of bacteroides uniformis beta-glucuronidase 3 0.9504 23 794
ID Description Score Start End Superfamily
5z1aA01 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.8719 22 194 2.60.120.260
5z1aA04 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8702 632 718 2.60.40.10
6mvfF01 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.8669 21 195 2.60.120.260
3fn9D02 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8593 196 304 2.60.40.10
af_P06864_208_318_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8569 197 303 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A520H5P5-F1-model_v4 Glycoside hydrolase family 2 0.9796 80 458 GO:0004553
GO:0005975
AF-A0A4Q3RFT9-F1-model_v4 Glycoside hydrolase family 2 0.9776 90 352 GO:0004553
GO:0005975
AF-A0A520H5P5-F1-model_v4 Glycoside hydrolase family 2 0.9771 80 458 GO:0004553
GO:0005975
AF-A0A520CK73-F1-model_v4 Glycoside hydrolase family 2 0.9714 19 226 GO:0004553
GO:0005975
AF-A0A519MPP5-F1-model_v4 Glycoside hydrolase family 2 0.967 12 524 GO:0004553
GO:0005975

Map