F270148
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 177 | 134 | 175 | 200 |
Family's Representative Sequence
| Representative Sequence | 3300009174|Ga0105241_10120452|Ga0105241_101204523 |
| Length | 224 |
| Sequence | MCRTAKLSRRVAWPIPTAVFRSEDLISTLQITTAAIRRGGRLLFHGVSLTLAAGQACALTGPNGSGKTSLLRAVAGLVRLEAGEIGFGGVDPTEARGDGLHLVGHADGLKPARTAREELAFWTRWCGGTEASAAAAAQTLELTPLMDLEVRRLSAGQRRRLAMARLLAAPRPLWLLDEPLSPLDARWRDAFGALMREHLAGGGLILAAVHDPLPVHAVSLELAA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2928972540 | Brevundimonas sp. 1080 | Isolate | Rhizosphere |
| 2 | 2977240413 | Brevundimonas vesicularis SORGH_AS 431 | Isolate | Unclassified |
| 3 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 4 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 5 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 6 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 7 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 8 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 9 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 10 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 23 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 25 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 26 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 27 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 28 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 29 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 30 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 32 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 33 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 34 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 36 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 45 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 46 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 70 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 71 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 72 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 73 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 74 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 75 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 76 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 77 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 78 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 79 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 80 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 81 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 82 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 83 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 84 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 85 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 86 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 87 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 88 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 89 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 90 | 3300041456 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG | Metagenome | Rhizoplane |
| 91 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 92 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 93 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 94 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 104 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 105 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 106 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 107 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 108 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 109 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 110 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 111 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 112 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 113 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 119 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 120 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 121 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 122 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 124 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 125 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 126 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 127 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 128 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 129 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 130 | 3300053138 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere | Metagenome | Endosphere |
| 131 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 132 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 133 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 134 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.74 |
| Metatranscriptomes | 1.13 |
| Isolates | 1.13 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 19.77 |
| Nodule | 0 |
| Rhizoplane | 2.26 |
| Rhizosphere | 65.54 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 12.43 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25153J46596_10027676 | 3300003215 | Bacteria | 1981 |
| 2 | Ga0006562J51391_1106068 | 3300003578 | Bacteria | 11360 |
| 3 | Ga0006562J51391_1106070 | 3300003578 | Bacteria | 4700 |
| 4 | Ga0055536_1025943 | 3300003781 | Bacteria | 1656 |
| 5 | Ga0055530_10000039 | 3300003791 | Bacteria | 115587 |
| 6 | Ga0055531_10026497 | 3300003794 | Bacteria | 2066 |
| 7 | Ga0065165_1000856 | 3300005262 | Bacteria | 39851 |
| 8 | Ga0065165_1040915 | 3300005262 | Bacteria | 1378 |
| 9 | Ga0070690_100279036 | 3300005330 | Bacteria | 1191 |
| 10 | Ga0070666_10110815 | 3300005335 | Bacteria | 1898 |
| 11 | Ga0070680_100038348 | 3300005336 | Bacteria | 3875 |
| 12 | Ga0070660_100518105 | 3300005339 | Bacteria | 993 |
| 13 | Ga0070661_100112522 | 3300005344 | Bacteria | 2034 |
| 14 | Ga0070671_100188012 | 3300005355 | Bacteria | 1750 |
| 15 | Ga0070674_100334818 | 3300005356 | Bacteria | 1217 |
| 16 | Ga0070674_100634961 | 3300005356 | Bacteria | 906 |
| 17 | Ga0070713_100047068 | 3300005436 | Bacteria | 3543 |
| 18 | Ga0070700_100291699 | 3300005441 | Bacteria | 1187 |
| 19 | Ga0070663_100310911 | 3300005455 | Bacteria | 1264 |
| 20 | Ga0070662_100075712 | 3300005457 | Bacteria | 2493 |
| 21 | Ga0070693_100172318 | 3300005547 | Bacteria | 1387 |
| 22 | Ga0070665_100001531 | 3300005548 | Bacteria | 26744 |
| 23 | Ga0068855_100092293 | 3300005563 | Bacteria | 3492 |
| 24 | Ga0068855_100128673 | 3300005563 | Bacteria | 2893 |
| 25 | Ga0070664_100194352 | 3300005564 | Bacteria | 1808 |
| 26 | Ga0068857_100872218 | 3300005577 | Bacteria | 862 |
| 27 | Ga0068854_100145453 | 3300005578 | Bacteria | 1823 |
| 28 | Ga0068854_100218780 | 3300005578 | Bacteria | 1506 |
| 29 | Ga0068856_100108812 | 3300005614 | Bacteria | 2768 |
| 30 | Ga0068856_100773878 | 3300005614 | Bacteria | 980 |
| 31 | Ga0068852_100608958 | 3300005616 | Bacteria | 1097 |
| 32 | Ga0068858_100292512 | 3300005842 | Bacteria | 1553 |
| 33 | Ga0068858_100806266 | 3300005842 | Bacteria | 916 |
| 34 | Ga0068860_100000477 | 3300005843 | Bacteria | 49839 |
| 35 | Ga0070717_10469047 | 3300006028 | Bacteria | 1136 |
| 36 | Ga0075363_100276769 | 3300006048 | Bacteria | 970 |
| 37 | Ga0075364_10001878 | 3300006051 | Bacteria | 11665 |
| 38 | Ga0075367_10000927 | 3300006178 | Bacteria | 11877 |
| 39 | Ga0097621_100836097 | 3300006237 | Bacteria | 855 |
| 40 | Ga0075430_100000276 | 3300006846 | Bacteria | 36027 |
| 41 | Ga0105240_10002568 | 3300009093 | Bacteria | 29102 |
| 42 | Ga0105240_10045926 | 3300009093 | Bacteria | 5538 |
| 43 | Ga0105240_10056265 | 3300009093 | Bacteria | 4922 |
| 44 | Ga0105240_10116767 | 3300009093 | Bacteria | 3219 |
| 45 | Ga0105240_10709440 | 3300009093 | Bacteria | 1097 |
| 46 | Ga0105241_10120452 | 3300009174 | Bacteria | 2112 |
| 47 | Ga0105241_10348556 | 3300009174 | Bacteria | 1285 |
| 48 | Ga0105238_10069604 | 3300009551 | Bacteria | 3519 |
| 49 | Ga0105238_10089150 | 3300009551 | Bacteria | 3072 |
| 50 | Ga0105239_10569558 | 3300010375 | Bacteria | 1291 |
| 51 | Ga0105239_10675267 | 3300010375 | Bacteria | 1180 |
| 52 | Ga0105239_11079144 | 3300010375 | Bacteria | 924 |
| 53 | Ga0157371_10023583 | 3300013102 | Bacteria | 4499 |
| 54 | Ga0157370_10024227 | 3300013104 | Bacteria | 6013 |
| 55 | Ga0157370_10537888 | 3300013104 | Bacteria | 1071 |
| 56 | Ga0157370_10537889 | 3300013104 | Bacteria | 1071 |
| 57 | Ga0157369_10012128 | 3300013105 | Bacteria | 9784 |
| 58 | Ga0157369_11286655 | 3300013105 | Bacteria | 745 |
| 59 | Ga0157372_10582719 | 3300013307 | Bacteria | 1304 |
| 60 | Ga0213876_10092803 | 3300021384 | Bacteria | 1599 |
| 61 | Ga0209026_1008681 | 3300025250 | Bacteria | 2090 |
| 62 | Ga0209148_1008871 | 3300025254 | Bacteria | 1995 |
| 63 | Ga0209676_1001571 | 3300025292 | Bacteria | 20402 |
| 64 | Ga0209758_1007552 | 3300025297 | Bacteria | 7353 |
| 65 | Ga0209050_1000073 | 3300025298 | Bacteria | 292046 |
| 66 | Ga0209257_1000099 | 3300025304 | Bacteria | 255304 |
| 67 | Ga0209257_1005734 | 3300025304 | Bacteria | 8499 |
| 68 | Ga0207654_10048306 | 3300025911 | Bacteria | 2435 |
| 69 | Ga0207707_10022544 | 3300025912 | Bacteria | 5504 |
| 70 | Ga0207695_10006813 | 3300025913 | Bacteria | 14728 |
| 71 | Ga0207695_10006913 | 3300025913 | Bacteria | 14586 |
| 72 | Ga0207695_10016959 | 3300025913 | Bacteria | 8499 |
| 73 | Ga0207695_10074305 | 3300025913 | Bacteria | 3461 |
| 74 | Ga0207695_10116315 | 3300025913 | Bacteria | 2648 |
| 75 | Ga0207660_10027026 | 3300025917 | Bacteria | 3912 |
| 76 | Ga0207660_10271618 | 3300025917 | Bacteria | 1343 |
| 77 | Ga0207660_10538016 | 3300025917 | Bacteria | 949 |
| 78 | Ga0207652_10065674 | 3300025921 | Bacteria | 3143 |
| 79 | Ga0207694_10299928 | 3300025924 | Bacteria | 1323 |
| 80 | Ga0207694_11085462 | 3300025924 | Bacteria | 677 |
| 81 | Ga0207706_10202174 | 3300025933 | Bacteria | 1742 |
| 82 | Ga0207669_10494233 | 3300025937 | Bacteria | 978 |
| 83 | Ga0207667_10039023 | 3300025949 | Bacteria | 5063 |
| 84 | Ga0207667_10075528 | 3300025949 | Bacteria | 3499 |
| 85 | Ga0207667_10906886 | 3300025949 | Bacteria | 873 |
| 86 | Ga0207640_10300575 | 3300025981 | Bacteria | 1269 |
| 87 | Ga0207703_10285632 | 3300026035 | Bacteria | 1500 |
| 88 | Ga0207703_10553352 | 3300026035 | Bacteria | 1085 |
| 89 | Ga0207639_10267262 | 3300026041 | Bacteria | 1498 |
| 90 | Ga0207678_10194430 | 3300026067 | Bacteria | 1734 |
| 91 | Ga0207702_10493673 | 3300026078 | Bacteria | 1193 |
| 92 | Ga0207702_10633847 | 3300026078 | Bacteria | 1051 |
| 93 | Ga0207641_10595527 | 3300026088 | Bacteria | 1082 |
| 94 | Ga0207674_10855145 | 3300026116 | Bacteria | 877 |
| 95 | Ga0207698_10264915 | 3300026142 | Bacteria | 1581 |
| 96 | Ga0207698_10268719 | 3300026142 | Bacteria | 1571 |
| 97 | Ga0207698_10520281 | 3300026142 | Bacteria | 1161 |
| 98 | Ga0268266_10004813 | 3300028379 | Bacteria | 12825 |
| 99 | Ga0307511_10026857 | 3300030521 | Bacteria | 5273 |
| 100 | Ga0265327_10001561 | 3300031251 | Bacteria | 28114 |
| 101 | Ga0307513_10103752 | 3300031456 | Bacteria | 2859 |
| 102 | Ga0307508_10000045 | 3300031616 | Bacteria | 142824 |
| 103 | Ga0265342_10050001 | 3300031712 | Bacteria | 2499 |
| 104 | Ga0307410_10733397 | 3300031852 | Bacteria | 835 |
| 105 | Ga0307406_10007598 | 3300031901 | Bacteria | 6019 |
| 106 | Ga0307412_10001893 | 3300031911 | Bacteria | 11575 |
| 107 | Ga0307414_10339470 | 3300032004 | Bacteria | 1285 |
| 108 | Ga0307414_10482722 | 3300032004 | Bacteria | 1093 |
| 109 | Ga0307411_10620390 | 3300032005 | Bacteria | 932 |
| 110 | Ga0307507_10009183 | 3300033179 | Bacteria | 13279 |
| 111 | Ga0373926_0062909 | 3300035083 | Bacteria | 1355 |
| 112 | Ga0373936_0012649 | 3300035113 | Bacteria | 3212 |
| 113 | Ga0373935_0048451 | 3300035692 | Bacteria | 2690 |
| 114 | Ga0373927_0009521 | 3300035695 | Bacteria | 6514 |
| 115 | Ga0373947_0045526 | 3300035725 | Bacteria | 2626 |
| 116 | Ga0395900_0575535 | 3300037418 | Bacteria | 1068 |
| 117 | Ga0395898_0426624 | 3300037466 | Bacteria | 1263 |
| 118 | Ga0395905_0075803 | 3300037471 | Bacteria | 3152 |
| 119 | Ga0395905_0152672 | 3300037471 | Bacteria | 2172 |
| 120 | Ga0395905_0708088 | 3300037471 | Bacteria | 909 |
| 121 | Ga0436365_1489701 | 3300039437 | Bacteria | 10510 |
| 122 | Ga0436363_0248719 | 3300039450 | Bacteria | 788 |
| 123 | Ga0451795_0964132 | 3300041456 | Bacteria | 718 |
| 124 | Ga0451853_3314725 | 3300041512 | Bacteria | 958 |
| 125 | Ga0439445_0058190 | 3300042004 | Bacteria | 1053 |
| 126 | Ga0466961_0184680 | 3300044693 | Bacteria | 1294 |
| 127 | Ga0495638_0009308 | 3300046460 | Bacteria | 6904 |
| 128 | Ga0495606_0267090 | 3300046507 | Bacteria | 942 |
| 129 | Ga0495648_0003200 | 3300046524 | Bacteria | 14540 |
| 130 | Ga0495633_0001326 | 3300046558 | Bacteria | 19437 |
| 131 | Ga0495668_0071263 | 3300046616 | Bacteria | 1910 |
| 132 | Ga0495625_0122761 | 3300046660 | Bacteria | 1766 |
| 133 | Ga0495669_0023716 | 3300046684 | Bacteria | 2673 |
| 134 | Ga0495649_0001171 | 3300046694 | Bacteria | 20335 |
| 135 | Ga0495686_0011032 | 3300047472 | Bacteria | 6392 |
| 136 | Ga0496106_0001644 | 3300048909 | Bacteria | 16771 |
| 137 | Ga0496109_0098872 | 3300048912 | Bacteria | 2706 |
| 138 | Ga0496115_0728864 | 3300048918 | Bacteria | 777 |
| 139 | Ga0496117_0071151 | 3300048920 | Bacteria | 2332 |
| 140 | Ga0496118_0014458 | 3300048921 | Bacteria | 7387 |
| 141 | Ga0496121_0000870 | 3300048924 | Bacteria | 54546 |
| 142 | Ga0496121_0090129 | 3300048924 | Bacteria | 2398 |
| 143 | Ga0496122_0003140 | 3300048925 | Bacteria | 22131 |
| 144 | Ga0496123_0000716 | 3300048926 | Bacteria | 54191 |
| 145 | Ga0496123_0203350 | 3300048926 | Bacteria | 1013 |
| 146 | Ga0496124_0002001 | 3300048927 | Bacteria | 27769 |
| 147 | Ga0496126_0013415 | 3300048929 | Bacteria | 8337 |
| 148 | Ga0496126_0306901 | 3300048929 | Bacteria | 1307 |
| 149 | Ga0501033_0077160 | 3300049570 | Bacteria | 2445 |
| 150 | Ga0501037_0289203 | 3300049573 | Bacteria | 1140 |
| 151 | Ga0501047_0408985 | 3300049581 | Bacteria | 1189 |
| 152 | Ga0501047_0473596 | 3300049581 | Bacteria | 1080 |
| 153 | Ga0501048_0208094 | 3300049582 | Bacteria | 1387 |
| 154 | Ga0501035_0380805 | 3300049822 | Bacteria | 1177 |
| 155 | nmdc:mga00v17_14876_c1 | 3300050491 | Bacteria | 4353 |
| 156 | nmdc:mga0k408_332948_c1 | 3300050493 | Bacteria | 905 |
| 157 | nmdc:mga0k408_61246_c1 | 3300050493 | Bacteria | 2187 |
| 158 | nmdc:mga04h51_3070_c1 | 3300050495 | Bacteria | 2067 |
| 159 | nmdc:mga07m45_1093_c1 | 3300050496 | Bacteria | 12097 |
| 160 | nmdc:mga07m45_212706_c1 | 3300050496 | Bacteria | 1125 |
| 161 | nmdc:mga07m45_77221_c1 | 3300050496 | Bacteria | 1899 |
| 162 | nmdc:mga0qj67_18_c1 | 3300050509 | Bacteria | 120268 |
| 163 | nmdc:mga0sz30_98188_c1 | 3300050516 | Bacteria | 1278 |
| 164 | Ga0500646_0066169 | 3300053090 | Bacteria | 1075 |
| 165 | Ga0500651_0042496 | 3300053093 | Bacteria | 2864 |
| 166 | Ga0500651_0335726 | 3300053093 | Bacteria | 860 |
| 167 | Ga0500566_0042970 | 3300053094 | Bacteria | 2605 |
| 168 | Ga0500641_0074239 | 3300053096 | Bacteria | 1436 |
| 169 | Ga0500562_000801 | 3300053108 | Bacteria | 7677 |
| 170 | Ga0500595_018295 | 3300053119 | Bacteria | 2566 |
| 171 | Ga0500564_158626 | 3300053138 | Bacteria | 959 |
| 172 | Ga0500590_156985 | 3300053148 | Bacteria | 1019 |
| 173 | Ga0500616_0000244 | 3300053153 | Bacteria | 85079 |
| 174 | Ga0500637_0055730 | 3300053178 | Bacteria | 2258 |
| 175 | Ga0500645_002071 | 3300053730 | Bacteria | 9298 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300031712 | Ga0265342_10050001 | Ga0265342_100500012 | 175 |
| 2 | 3300048912 | Ga0496109_0098872 | Ga0496109_0098872_385_921 | 175 |
| 3 | 3300005330 | Ga0070690_100279036 | Ga0070690_1002790362 | 176 |
| 4 | 3300005344 | Ga0070661_100112522 | Ga0070661_1001125223 | 176 |
| 5 | 3300005355 | Ga0070671_100188012 | Ga0070671_1001880122 | 176 |
| 6 | 3300005441 | Ga0070700_100291699 | Ga0070700_1002916992 | 176 |
| 7 | 3300005455 | Ga0070663_100310911 | Ga0070663_1003109112 | 176 |
| 8 | 3300005457 | Ga0070662_100075712 | Ga0070662_1000757123 | 176 |
| 9 | 3300005547 | Ga0070693_100172318 | Ga0070693_1001723182 | 176 |
| 10 | 3300005564 | Ga0070664_100194352 | Ga0070664_1001943522 | 176 |
| 11 | 3300005578 | Ga0068854_100145453 | Ga0068854_1001454532 | 176 |
| 12 | 3300005616 | Ga0068852_100608958 | Ga0068852_1006089582 | 176 |
| 13 | 3300013307 | Ga0157372_10582719 | Ga0157372_105827191 | 176 |
| 14 | 3300025933 | Ga0207706_10202174 | Ga0207706_102021743 | 176 |
| 15 | 3300026067 | Ga0207678_10194430 | Ga0207678_101944302 | 176 |
| 16 | 3300026142 | Ga0207698_10268719 | Ga0207698_102687192 | 176 |
| 17 | 3300009093 | Ga0105240_10116767 | Ga0105240_101167672 | 181 |
| 18 | 3300025913 | Ga0207695_10116315 | Ga0207695_101163152 | 181 |
| 19 | 3300035083 | Ga0373926_0062909 | Ga0373926_0062909_759_1313 | 181 |
| 20 | 3300035113 | Ga0373936_0012649 | Ga0373936_0012649_2145_2747 | 181 |
| 21 | 3300035692 | Ga0373935_0048451 | Ga0373935_0048451_377_931 | 181 |
| 22 | 3300035695 | Ga0373927_0009521 | Ga0373927_0009521_1542_2096 | 181 |
| 23 | 3300035725 | Ga0373947_0045526 | Ga0373947_0045526_21_575 | 181 |
| 24 | 3300053094 | Ga0500566_0042970 | Ga0500566_0042970_67_621 | 181 |
| 25 | 3300053138 | Ga0500564_158626 | Ga0500564_158626_346_900 | 181 |
| 26 | 3300053148 | Ga0500590_156985 | Ga0500590_156985_230_784 | 181 |
| 27 | 3300053178 | Ga0500637_0055730 | Ga0500637_0055730_351_905 | 181 |
| 28 | 3300009174 | Ga0105241_10348556 | Ga0105241_103485562 | 182 |
| 29 | 3300010375 | Ga0105239_11079144 | Ga0105239_110791441 | 182 |
| 30 | 3300048909 | Ga0496106_0001644 | Ga0496106_0001644_13954_14511 | 182 |
| 31 | 3300048920 | Ga0496117_0071151 | Ga0496117_0071151_708_1265 | 182 |
| 32 | 3300048921 | Ga0496118_0014458 | Ga0496118_0014458_1193_1750 | 182 |
| 33 | 3300048924 | Ga0496121_0000870 | Ga0496121_0000870_9562_10119 | 182 |
| 34 | 3300048927 | Ga0496124_0002001 | Ga0496124_0002001_5082_5639 | 182 |
| 35 | 3300048929 | Ga0496126_0013415 | Ga0496126_0013415_3281_3838 | 182 |
| 36 | 3300005614 | Ga0068856_100108812 | Ga0068856_1001088124 | 183 |
| 37 | 3300053090 | Ga0500646_0066169 | Ga0500646_0066169_345_1043 | 186 |
| 38 | 3300013104 | Ga0157370_10024227 | Ga0157370_100242272 | 187 |
| 39 | 3300013104 | Ga0157370_10537888 | Ga0157370_105378882 | 187 |
| 40 | 3300025912 | Ga0207707_10022544 | Ga0207707_100225448 | 187 |
| 41 | 3300041512 | Ga0451853_3314725 | Ga0451853_3314725_202_825 | 187 |
| 42 | 3300046460 | Ga0495638_0009308 | Ga0495638_0009308_5033_5791 | 187 |
| 43 | 3300046507 | Ga0495606_0267090 | Ga0495606_0267090_174_746 | 187 |
| 44 | 3300046524 | Ga0495648_0003200 | Ga0495648_0003200_9292_9864 | 187 |
| 45 | 3300048924 | Ga0496121_0090129 | Ga0496121_0090129_1220_1792 | 187 |
| 46 | 3300048929 | Ga0496126_0306901 | Ga0496126_0306901_566_1138 | 187 |
| 47 | 3300009093 | Ga0105240_10002568 | Ga0105240_1000256832 | 188 |
| 48 | 3300025913 | Ga0207695_10016959 | Ga0207695_100169592 | 188 |
| 49 | 3300053096 | Ga0500641_0074239 | Ga0500641_0074239_387_1148 | 189 |
| 50 | 3300037471 | Ga0395905_0075803 | Ga0395905_0075803_2256_2858 | 193 |
| 51 | iso_pu_bacteria | 2928972540 | 2928974421 | 195 |
| 52 | iso_pu_bacteria | 2977240413 | 2977243344 | 195 |
| 53 | 3300005436 | Ga0070713_100047068 | Ga0070713_1000470686 | 196 |
| 54 | 3300006028 | Ga0070717_10469047 | Ga0070717_104690472 | 196 |
| 55 | 3300032004 | Ga0307414_10339470 | Ga0307414_103394701 | 196 |
| 56 | 3300039450 | Ga0436363_0248719 | Ga0436363_0248719_26_628 | 196 |
| 57 | 3300005356 | Ga0070674_100634961 | Ga0070674_1006349612 | 197 |
| 58 | 3300005843 | Ga0068860_100000477 | Ga0068860_10000047751 | 197 |
| 59 | 3300006237 | Ga0097621_100836097 | Ga0097621_1008360972 | 197 |
| 60 | 3300009093 | Ga0105240_10709440 | Ga0105240_107094402 | 197 |
| 61 | 3300009551 | Ga0105238_10069604 | Ga0105238_100696042 | 197 |
| 62 | 3300026088 | Ga0207641_10595527 | Ga0207641_105955272 | 197 |
| 63 | 3300031456 | Ga0307513_10103752 | Ga0307513_101037521 | 197 |
| 64 | 3300031616 | Ga0307508_10000045 | Ga0307508_1000004549 | 197 |
| 65 | 3300033179 | Ga0307507_10009183 | Ga0307507_100091837 | 197 |
| 66 | 3300049570 | Ga0501033_0077160 | Ga0501033_0077160_1320_1916 | 197 |
| 67 | 3300049573 | Ga0501037_0289203 | Ga0501037_0289203_309_905 | 197 |
| 68 | 3300049581 | Ga0501047_0473596 | Ga0501047_0473596_421_1017 | 197 |
| 69 | 3300050493 | nmdc:mga0k408_332948_c1 | nmdc:mga0k408_332948_c1_256_852 | 197 |
| 70 | 3300005356 | Ga0070674_100334818 | Ga0070674_1003348182 | 198 |
| 71 | 3300005577 | Ga0068857_100872218 | Ga0068857_1008722181 | 198 |
| 72 | 3300021384 | Ga0213876_10092803 | Ga0213876_100928032 | 198 |
| 73 | 3300025937 | Ga0207669_10494233 | Ga0207669_104942332 | 198 |
| 74 | 3300026078 | Ga0207702_10493673 | Ga0207702_104936732 | 198 |
| 75 | 3300026116 | Ga0207674_10855145 | Ga0207674_108551451 | 198 |
| 76 | 3300039437 | Ga0436365_1489701 | Ga0436365_1489701_1751_2350 | 198 |
| 77 | 3300049582 | Ga0501048_0208094 | Ga0501048_0208094_504_1103 | 198 |
| 78 | 3300003578 | Ga0006562J51391_1106068 | Ga0006562J51391_11060683 | 199 |
| 79 | 3300003578 | Ga0006562J51391_1106070 | Ga0006562J51391_11060701 | 199 |
| 80 | 3300005335 | Ga0070666_10110815 | Ga0070666_101108152 | 199 |
| 81 | 3300005336 | Ga0070680_100038348 | Ga0070680_1000383482 | 199 |
| 82 | 3300005339 | Ga0070660_100518105 | Ga0070660_1005181051 | 199 |
| 83 | 3300005563 | Ga0068855_100092293 | Ga0068855_1000922932 | 199 |
| 84 | 3300005563 | Ga0068855_100128673 | Ga0068855_1001286732 | 199 |
| 85 | 3300005578 | Ga0068854_100218780 | Ga0068854_1002187802 | 199 |
| 86 | 3300005842 | Ga0068858_100292512 | Ga0068858_1002925122 | 199 |
| 87 | 3300005842 | Ga0068858_100806266 | Ga0068858_1008062661 | 199 |
| 88 | 3300009093 | Ga0105240_10045926 | Ga0105240_1004592610 | 199 |
| 89 | 3300009093 | Ga0105240_10056265 | Ga0105240_100562659 | 199 |
| 90 | 3300009551 | Ga0105238_10089150 | Ga0105238_100891504 | 199 |
| 91 | 3300013102 | Ga0157371_10023583 | Ga0157371_100235832 | 199 |
| 92 | 3300013104 | Ga0157370_10537889 | Ga0157370_105378892 | 199 |
| 93 | 3300013105 | Ga0157369_10012128 | Ga0157369_100121285 | 199 |
| 94 | 3300013105 | Ga0157369_11286655 | Ga0157369_112866551 | 199 |
| 95 | 3300025254 | Ga0209148_1008871 | Ga0209148_10088712 | 199 |
| 96 | 3300025913 | Ga0207695_10006813 | Ga0207695_1000681315 | 199 |
| 97 | 3300025913 | Ga0207695_10006913 | Ga0207695_1000691316 | 199 |
| 98 | 3300025913 | Ga0207695_10074305 | Ga0207695_100743052 | 199 |
| 99 | 3300025917 | Ga0207660_10027026 | Ga0207660_100270263 | 199 |
| 100 | 3300025917 | Ga0207660_10271618 | Ga0207660_102716182 | 199 |
| 101 | 3300025917 | Ga0207660_10538016 | Ga0207660_105380161 | 199 |
| 102 | 3300025921 | Ga0207652_10065674 | Ga0207652_100656742 | 199 |
| 103 | 3300025924 | Ga0207694_11085462 | Ga0207694_110854621 | 199 |
| 104 | 3300025949 | Ga0207667_10039023 | Ga0207667_100390233 | 199 |
| 105 | 3300025949 | Ga0207667_10075528 | Ga0207667_100755283 | 199 |
| 106 | 3300025949 | Ga0207667_10906886 | Ga0207667_109068862 | 199 |
| 107 | 3300025981 | Ga0207640_10300575 | Ga0207640_103005752 | 199 |
| 108 | 3300026035 | Ga0207703_10285632 | Ga0207703_102856322 | 199 |
| 109 | 3300026035 | Ga0207703_10553352 | Ga0207703_105533522 | 199 |
| 110 | 3300026041 | Ga0207639_10267262 | Ga0207639_102672622 | 199 |
| 111 | 3300026078 | Ga0207702_10633847 | Ga0207702_106338472 | 199 |
| 112 | 3300026142 | Ga0207698_10264915 | Ga0207698_102649152 | 199 |
| 113 | 3300031251 | Ga0265327_10001561 | Ga0265327_1000156117 | 199 |
| 114 | 3300031852 | Ga0307410_10733397 | Ga0307410_107333971 | 199 |
| 115 | 3300037418 | Ga0395900_0575535 | Ga0395900_0575535_148_750 | 199 |
| 116 | 3300037466 | Ga0395898_0426624 | Ga0395898_0426624_213_815 | 199 |
| 117 | 3300037471 | Ga0395905_0152672 | Ga0395905_0152672_608_1210 | 199 |
| 118 | 3300037471 | Ga0395905_0708088 | Ga0395905_0708088_168_770 | 199 |
| 119 | 3300041456 | Ga0451795_0964132 | Ga0451795_0964132_18_641 | 199 |
| 120 | 3300044693 | Ga0466961_0184680 | Ga0466961_0184680_657_1259 | 199 |
| 121 | 3300046558 | Ga0495633_0001326 | Ga0495633_0001326_8260_8883 | 199 |
| 122 | 3300046694 | Ga0495649_0001171 | Ga0495649_0001171_2309_2932 | 199 |
| 123 | 3300048918 | Ga0496115_0728864 | Ga0496115_0728864_122_724 | 199 |
| 124 | 3300048925 | Ga0496122_0003140 | Ga0496122_0003140_19279_19902 | 199 |
| 125 | 3300048926 | Ga0496123_0000716 | Ga0496123_0000716_14583_15206 | 199 |
| 126 | 3300048926 | Ga0496123_0203350 | Ga0496123_0203350_140_763 | 199 |
| 127 | 3300049822 | Ga0501035_0380805 | Ga0501035_0380805_351_953 | 199 |
| 128 | 3300053093 | Ga0500651_0042496 | Ga0500651_0042496_279_902 | 199 |
| 129 | 3300053108 | Ga0500562_000801 | Ga0500562_000801_900_1502 | 199 |
| 130 | 3300005548 | Ga0070665_100001531 | Ga0070665_10000153117 | 200 |
| 131 | 3300005614 | Ga0068856_100773878 | Ga0068856_1007738782 | 200 |
| 132 | 3300010375 | Ga0105239_10569558 | Ga0105239_105695582 | 200 |
| 133 | 3300028379 | Ga0268266_10004813 | Ga0268266_100048135 | 200 |
| 134 | 3300006846 | Ga0075430_100000276 | Ga0075430_10000027634 | 202 |
| 135 | 3300050509 | nmdc:mga0qj67_18_c1 | nmdc:mga0qj67_18_c1_64688_65311 | 202 |
| 136 | 3300003781 | Ga0055536_1025943 | Ga0055536_10259432 | 206 |
| 137 | 3300006048 | Ga0075363_100276769 | Ga0075363_1002767692 | 206 |
| 138 | 3300006051 | Ga0075364_10001878 | Ga0075364_100018787 | 206 |
| 139 | 3300006178 | Ga0075367_10000927 | Ga0075367_1000092712 | 206 |
| 140 | 3300025292 | Ga0209676_1001571 | Ga0209676_100157122 | 206 |
| 141 | 3300025924 | Ga0207694_10299928 | Ga0207694_102999282 | 206 |
| 142 | 3300031901 | Ga0307406_10007598 | Ga0307406_100075984 | 206 |
| 143 | 3300031911 | Ga0307412_10001893 | Ga0307412_1000189313 | 206 |
| 144 | 3300046684 | Ga0495669_0023716 | Ga0495669_0023716_1214_1837 | 206 |
| 145 | 3300049581 | Ga0501047_0408985 | Ga0501047_0408985_386_1051 | 206 |
| 146 | 3300050491 | nmdc:mga00v17_14876_c1 | nmdc:mga00v17_14876_c1_809_1432 | 206 |
| 147 | 3300050493 | nmdc:mga0k408_61246_c1 | nmdc:mga0k408_61246_c1_1162_1785 | 206 |
| 148 | 3300050495 | nmdc:mga04h51_3070_c1 | nmdc:mga04h51_3070_c1_453_1076 | 206 |
| 149 | 3300050496 | nmdc:mga07m45_1093_c1 | nmdc:mga07m45_1093_c1_8970_9593 | 206 |
| 150 | 3300050496 | nmdc:mga07m45_212706_c1 | nmdc:mga07m45_212706_c1_360_983 | 206 |
| 151 | 3300050516 | nmdc:mga0sz30_98188_c1 | nmdc:mga0sz30_98188_c1_458_1081 | 206 |
| 152 | 3300053093 | Ga0500651_0335726 | Ga0500651_0335726_151_801 | 206 |
| 153 | 3300030521 | Ga0307511_10026857 | Ga0307511_100268572 | 211 |
| 154 | 3300046616 | Ga0495668_0071263 | Ga0495668_0071263_1135_1773 | 211 |
| 155 | 3300050496 | nmdc:mga07m45_77221_c1 | nmdc:mga07m45_77221_c1_891_1529 | 211 |
| 156 | 3300053119 | Ga0500595_018295 | Ga0500595_018295_1083_1721 | 211 |
| 157 | 3300026142 | Ga0207698_10520281 | Ga0207698_105202812 | 212 |
| 158 | 3300003215 | JGI25153J46596_10027676 | JGI25153J46596_100276761 | 213 |
| 159 | 3300003791 | Ga0055530_10000039 | Ga0055530_1000003926 | 213 |
| 160 | 3300003794 | Ga0055531_10026497 | Ga0055531_100264973 | 213 |
| 161 | 3300005262 | Ga0065165_1000856 | Ga0065165_10008561 | 213 |
| 162 | 3300005262 | Ga0065165_1040915 | Ga0065165_10409152 | 213 |
| 163 | 3300009174 | Ga0105241_10120452 | Ga0105241_101204523 | 213 |
| 164 | 3300010375 | Ga0105239_10675267 | Ga0105239_106752672 | 213 |
| 165 | 3300025250 | Ga0209026_1008681 | Ga0209026_10086812 | 213 |
| 166 | 3300025297 | Ga0209758_1007552 | Ga0209758_10075524 | 213 |
| 167 | 3300025298 | Ga0209050_1000073 | Ga0209050_100007382 | 213 |
| 168 | 3300025304 | Ga0209257_1000099 | Ga0209257_1000099215 | 213 |
| 169 | 3300025304 | Ga0209257_1005734 | Ga0209257_100573411 | 213 |
| 170 | 3300025911 | Ga0207654_10048306 | Ga0207654_100483063 | 213 |
| 171 | 3300032004 | Ga0307414_10482722 | Ga0307414_104827222 | 213 |
| 172 | 3300032005 | Ga0307411_10620390 | Ga0307411_106203902 | 213 |
| 173 | 3300042004 | Ga0439445_0058190 | Ga0439445_0058190_156_800 | 213 |
| 174 | 3300046660 | Ga0495625_0122761 | Ga0495625_0122761_859_1503 | 213 |
| 175 | 3300047472 | Ga0495686_0011032 | Ga0495686_0011032_540_1184 | 213 |
| 176 | 3300053153 | Ga0500616_0000244 | Ga0500616_0000244_54074_54730 | 213 |
| 177 | 3300053730 | Ga0500645_002071 | Ga0500645_002071_8321_8965 | 213 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7o17-assembly1.cif.gz_B | abc transporter nosdfy e154q, atp-bound in lipid nanodisc | 0.9319 | 19 | 201 |
| 7e7q-assembly1.cif.gz_A | cryo-em structure of human abca4 in atp-bound state | 0.9139 | 16 | 212 |
| 7oji-assembly1.cif.gz_A | abcg2 topotecan turnover-2 state | 0.9052 | 17 | 201 |
| 5x40-assembly1.cif.gz_B | structure of a cbio dimer bound with amppcp | 0.9022 | 19 | 212 |
| 8ce5-assembly1.cif.gz_A | cytochrome c maturation complex ccmabcd, e154q, atp-bound | 0.8991 | 19 | 213 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P33931_1_204_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9314 | 19 | 213 | 3.40.50.300 |
| af_A0A096TX75_2_202_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9299 | 17 | 209 | 3.40.50.300 |
| af_E7F3Y5_15_267_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9235 | 17 | 199 | 3.40.50.300 |
| af_Q2FXB7_1_229_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9189 | 16 | 212 | 3.40.50.300 |
| af_Q2FVB4_1_230_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9137 | 19 | 212 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7U1EAJ7-F1-model_v4 | deleted | 0.9964 | 39 | 210 |
|
| AF-A0A2G4JT35-F1-model_v4 | deleted | 0.9938 | 16 | 213 |
|
| AF-A0A1G2WKL2-F1-model_v4 | deleted | 0.9867 | 16 | 154 |
|
| AF-A0A1G2WKL2-F1-model_v4 | deleted | 0.9661 | 16 | 154 |
|
| AF-A0A2E3ZJV6-F1-model_v4 | Heme ABC transporter ATP-binding protein CcmA | 0.9648 | 18 | 213 |
GO:0005524
GO:0015439 GO:0016020 GO:0016887 GO:0017004 |
Predicted Structure (AlphaFold2)
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