F270133

General Info

Members Datasets Scaffolds Average Seq Length
177 91 175 428

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10003549|Ga0114129_1000354915
Length 500
Sequence MTAIRSLDPLLPQEVSGHSTVKVVENIRASNWFTVGSRNCQATARRKGEATMKIGFLSLPVTGHLNSMTGLARKLQSRGHEVVFIGVPDTERAIRAADLQFVPFCENEYPPGSIGKSWGAVANLRGLDVIRYSARVLVPELLSAAVKHLPGKIAETGVEALVLDSLCFAEIVPIHLRMPYVLIWSVLHLDFSGATPLSLYGWPHETTPEALARNVAGLQTFGELRGPVLAIAQAYADRNELEIDLSNPAATSCELATITQTPKEFDFPIPELPAGFHYAGPLHDSEGREPIPFSWEKLTGKPLIYASMGTLVNGLKNVYRTILEAVSEFPEMQMVLSVGRNVDPNDLGPNPANTIVVPIAPQIELLKRATLCITHAGLNTTLEALAQGVPLVAIPIGYDQPGVASRIAYHGVGEFVELGDLSKQRLSELIAKVTSNPSYRDKARWFQNVLREKHGLDVAADIIEKVFRSRKRSSELIDESLGVRKKVSAATGSSSIRSQP

Samples

Sample ID Description Type Environment
1 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
39 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
40 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
41 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
42 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
65 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
68 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
69 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
70 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
71 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
77 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
78 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
79 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
82 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
83 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
84 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
87 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
88 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
89 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
90 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
91 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.56
Nodule 0
Rhizoplane 3.39
Rhizosphere 87.57
Stem 0
Stem Tuber 0
Unclassified 8.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJNas_1000931 3300000546 Unclassified 4703
2 JGI25404J52841_10004044 3300003659 Bacteria 2946
3 Ga0065712_10020636 3300005290 Bacteria 1672
4 Ga0070676_10042376 3300005328 Bacteria 2643
5 Ga0070683_100020858 3300005329 Bacteria 5840
6 Ga0068869_100012860 3300005334 Bacteria 5541
7 Ga0070671_100043235 3300005355 Bacteria 3744
8 Ga0070674_100172744 3300005356 Unclassified 1649
9 Ga0070709_10023679 3300005434 Bacteria 3609
10 Ga0070709_10092292 3300005434 Bacteria 1999
11 Ga0070713_100021181 3300005436 Bacteria 4995
12 Ga0070713_100306086 3300005436 Bacteria 1464
13 Ga0070706_100039723 3300005467 Bacteria 4343
14 Ga0070706_100044273 3300005467 Bacteria 4111
15 Ga0070706_100044506 3300005467 Bacteria 4101
16 Ga0070706_100173392 3300005467 Bacteria 2014
17 Ga0070706_100344971 3300005467 Unclassified 1388
18 Ga0070707_100117144 3300005468 Archaea 2586
19 Ga0070707_100206295 3300005468 Bacteria 1916
20 Ga0070707_100288825 3300005468 Bacteria 1594
21 Ga0070698_100042931 3300005471 Bacteria 4637
22 Ga0070698_100046805 3300005471 Plasmid 4422
23 Ga0070698_100148542 3300005471 Unclassified 2292
24 Ga0070697_100032875 3300005536 Bacteria 4176
25 Ga0068853_100000002 3300005539 Bacteria 485323
26 Ga0068853_100272068 3300005539 Bacteria 1560
27 Ga0070702_100053681 3300005615 Bacteria 2316
28 Ga0068858_100015174 3300005842 Bacteria 7246
29 Ga0068860_100041822 3300005843 Bacteria 4378
30 Ga0081455_10030943 3300005937 Bacteria 4852
31 Ga0081540_1001169 3300005983 Bacteria 23052
32 Ga0081540_1003984 3300005983 Bacteria 11456
33 Ga0081540_1019239 3300005983 Bacteria 4159
34 Ga0081540_1030560 3300005983 Unclassified 2980
35 Ga0081540_1060348 3300005983 Bacteria 1814
36 Ga0081540_1068993 3300005983 Unclassified 1645
37 Ga0070717_10139172 3300006028 Bacteria 2093
38 Ga0070716_100004551 3300006173 Bacteria 6647
39 Ga0070712_100005491 3300006175 Bacteria 7849
40 Ga0070712_100036960 3300006175 Bacteria 3325
41 Ga0070712_100038833 3300006175 Bacteria 3256
42 Ga0070712_100045691 3300006175 Bacteria 3025
43 Ga0070712_100093656 3300006175 Unclassified 2206
44 Ga0075433_10240179 3300006852 Bacteria 1608
45 Ga0075434_100016131 3300006871 Bacteria 7178
46 Ga0075434_100155394 3300006871 Unclassified 2307
47 Ga0105245_10028884 3300009098 Bacteria 4896
48 Ga0114129_10003549 3300009147 Bacteria 21958
49 Ga0114129_10241473 3300009147 Bacteria 2428
50 Ga0105243_10123442 3300009148 Unclassified 2187
51 Ga0105242_10128938 3300009176 Unclassified 2181
52 Ga0105248_10048544 3300009177 Unclassified 4762
53 Ga0105248_10245057 3300009177 Bacteria 2017
54 Ga0105248_10276211 3300009177 Bacteria 1892
55 Ga0105249_10110502 3300009553 Bacteria 2597
56 Ga0099796_10036415 3300010159 Unclassified 1638
57 Ga0099796_10047630 3300010159 Unclassified 1475
58 Ga0105239_10019192 3300010375 Bacteria 7552
59 Ga0157374_10003117 3300013296 Bacteria 13923
60 Ga0157374_10046127 3300013296 Bacteria 4035
61 Ga0157374_10122067 3300013296 Bacteria 2515
62 Ga0157374_10158493 3300013296 Unclassified 2204
63 Ga0157378_10000968 3300013297 Bacteria 26320
64 Ga0157378_10047448 3300013297 Bacteria 3819
65 Ga0157378_10048472 3300013297 Bacteria 3778
66 Ga0157378_10096561 3300013297 Bacteria 2693
67 Ga0157378_10124819 3300013297 Bacteria 2377
68 Ga0157378_10134744 3300013297 Bacteria 2289
69 Ga0157378_10169448 3300013297 Unclassified 2047
70 Ga0163162_10050794 3300013306 Bacteria 4159
71 Ga0163162_10281072 3300013306 Unclassified 1796
72 Ga0157376_10006403 3300014969 Bacteria 8319
73 Ga0157376_10008238 3300014969 Bacteria 7507
74 Ga0157376_10016613 3300014969 Bacteria 5593
75 Ga0157376_10018937 3300014969 Bacteria 5293
76 Ga0157376_10128530 3300014969 Bacteria 2257
77 Ga0213872_10000080 3300021361 Bacteria 88817
78 Ga0213872_10011973 3300021361 Bacteria 4093
79 Ga0213872_10013330 3300021361 Bacteria 3854
80 Ga0213872_10025175 3300021361 Bacteria 2736
81 Ga0213876_10006409 3300021384 Bacteria 6415
82 Ga0213876_10025133 3300021384 Unclassified 3144
83 Ga0213876_10034712 3300021384 Bacteria 2660
84 Ga0213871_10029605 3300021441 Bacteria 1420
85 Ga0228598_1004529 3300024227 Bacteria 2940
86 Ga0207647_10012127 3300025904 Bacteria 6014
87 Ga0207699_10013650 3300025906 Bacteria 4164
88 Ga0207645_10027512 3300025907 Bacteria 3670
89 Ga0207684_10005325 3300025910 Bacteria 11895
90 Ga0207684_10006675 3300025910 Bacteria 10484
91 Ga0207684_10071504 3300025910 Bacteria 2948
92 Ga0207684_10118040 3300025910 Bacteria 2273
93 Ga0207684_10126332 3300025910 Bacteria 2195
94 Ga0207693_10008933 3300025915 Bacteria 8179
95 Ga0207693_10013046 3300025915 Bacteria 6705
96 Ga0207693_10021412 3300025915 Bacteria 5138
97 Ga0207693_10026998 3300025915 Bacteria 4541
98 Ga0207693_10043780 3300025915 Bacteria 3520
99 Ga0207693_10044812 3300025915 Bacteria 3476
100 Ga0207693_10049171 3300025915 Bacteria 3311
101 Ga0207693_10066864 3300025915 Bacteria 2814
102 Ga0207663_10007784 3300025916 Bacteria 5581
103 Ga0207663_10030397 3300025916 Bacteria 3186
104 Ga0207663_10032624 3300025916 Bacteria 3094
105 Ga0207663_10059401 3300025916 Bacteria 2418
106 Ga0207681_10037460 3300025923 Bacteria 3206
107 Ga0207700_10044984 3300025928 Bacteria 3254
108 Ga0207644_10151571 3300025931 Unclassified 1794
109 Ga0207706_10239591 3300025933 Bacteria 1586
110 Ga0207709_10127919 3300025935 Bacteria 1726
111 Ga0207665_10155499 3300025939 Bacteria 1641
112 Ga0207711_10051343 3300025941 Bacteria 3531
113 Ga0207689_10010141 3300025942 Bacteria 8121
114 Ga0207661_10036423 3300025944 Bacteria 3841
115 Ga0207661_10229873 3300025944 Bacteria 1642
116 Ga0207658_10123136 3300025986 Bacteria 2071
117 Ga0207677_10186946 3300026023 Bacteria 1635
118 Ga0207703_10005683 3300026035 Bacteria 10009
119 Ga0207639_10000012 3300026041 Bacteria 344067
120 Ga0207683_10010879 3300026121 Bacteria 7761
121 Ga0268264_10003046 3300028381 Bacteria 14528
122 Ga0268264_10003257 3300028381 Bacteria 14044
123 Ga0265338_10007129 3300028800 Bacteria 13998
124 Ga0265338_10087351 3300028800 Bacteria 2591
125 Ga0265328_10007897 3300031239 Unclassified 4419
126 Ga0265320_10002457 3300031240 Bacteria 12894
127 Ga0265320_10014485 3300031240 Bacteria 4485
128 Ga0265339_10006430 3300031249 Bacteria 7705
129 Ga0265339_10011223 3300031249 Bacteria 5526
130 Ga0265314_10005673 3300031711 Bacteria 11206
131 Ga0265314_10069675 3300031711 Bacteria 2359
132 Ga0265342_10001079 3300031712 Bacteria 26449
133 Ga0265342_10009018 3300031712 Bacteria 7084
134 Ga0373955_0002728 3300035172 Bacteria 7735
135 Ga0373933_0003060 3300035724 Bacteria 9334
136 Ga0373937_0007029 3300036401 Bacteria 9716
137 Ga0373937_0269202 3300036401 Unclassified 1608
138 Ga0395898_0029841 3300037466 Bacteria 5459
139 Ga0436364_0612159 3300037853 Bacteria 6370
140 Ga0436364_0881125 3300037853 Unclassified 3002
141 Ga0436364_1039576 3300037853 Bacteria 3170
142 Ga0436364_1269197 3300037853 Bacteria 1898
143 Ga0395901_0068485 3300038443 Bacteria 3697
144 Ga0436365_0226896 3300039437 Bacteria 15496
145 Ga0436365_0625239 3300039437 Bacteria 1582
146 Ga0436365_1197382 3300039437 Bacteria 2896
147 Ga0436365_1385742 3300039437 Bacteria 5180
148 Ga0436365_1739553 3300039437 Bacteria 31804
149 Ga0436365_1890429 3300039437 Bacteria 14871
150 Ga0436360_1029516 3300039438 Bacteria 3820
151 Ga0436361_0014087 3300039447 Bacteria 1915
152 Ga0436361_0022533 3300039447 Bacteria 4047
153 Ga0436361_0107925 3300039447 Bacteria 3273
154 Ga0436361_0247001 3300039447 Bacteria 107036
155 Ga0436361_0497604 3300039447 Bacteria 4122
156 Ga0436361_1046218 3300039447 Bacteria 10500
157 Ga0436361_1199494 3300039447 Bacteria 2108
158 Ga0436363_0281163 3300039450 Unclassified 1810
159 Ga0436362_0871592 3300039453 Unclassified 3676
160 Ga0466967_0137262 3300045976 Unclassified 2275
161 Ga0496102_0007443 3300048905 Bacteria 9355
162 Ga0496102_0061363 3300048905 Bacteria 3441
163 Ga0496103_0061572 3300048906 Bacteria 2334
164 Ga0496106_0165958 3300048909 Bacteria 1748
165 Ga0496107_0136165 3300048910 Bacteria 1814
166 Ga0496112_0024604 3300048915 Bacteria 5770
167 Ga0496126_0000004 3300048929 Bacteria 925026
168 nmdc:mga0yw44_917_c1 3300050492 Bacteria 11155
169 nmdc:mga05p37_180772_c1 3300050507 Bacteria 2566
170 nmdc:mga05p37_63722_c1 3300050507 Bacteria 4536
171 nmdc:mga06r32_258278_c1 3300050510 Bacteria 1730
172 nmdc:mga0n895_106789_c1 3300050512 Unclassified 2813
173 nmdc:mga0n895_23904_c1 3300050512 Bacteria 5751
174 nmdc:mga0n895_81858_c1 3300050512 Bacteria 3217
175 nmdc:mga0rr50_42535_c1 3300050513 Bacteria 2837

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048905 Ga0496102_0007443 Ga0496102_0007443_6781_7866 304
2 3300048906 Ga0496103_0061572 Ga0496103_0061572_627_1712 304
3 3300048909 Ga0496106_0165958 Ga0496106_0165958_89_1174 304
4 3300050513 nmdc:mga0rr50_42535_c1 nmdc:mga0rr50_42535_c1_66_1184 304
5 3300050512 nmdc:mga0n895_23904_c1 nmdc:mga0n895_23904_c1_4517_5704 318
6 3300009098 Ga0105245_10028884 Ga0105245_100288844 337
7 3300009177 Ga0105248_10245057 Ga0105248_102450572 337
8 3300010375 Ga0105239_10019192 Ga0105239_100191924 337
9 3300013297 Ga0157378_10000968 Ga0157378_100009689 337
10 3300037853 Ga0436364_0612159 Ga0436364_0612159_4786_5997 343
11 3300009148 Ga0105243_10123442 Ga0105243_101234421 347
12 3300021384 Ga0213876_10006409 Ga0213876_100064093 347
13 3300025935 Ga0207709_10127919 Ga0207709_101279191 347
14 3300039437 Ga0436365_1890429 Ga0436365_1890429_637_1896 347
15 3300006871 Ga0075434_100016131 Ga0075434_1000161313 349
16 3300005467 Ga0070706_100173392 Ga0070706_1001733921 353
17 3300005467 Ga0070706_100344971 Ga0070706_1003449711 353
18 3300045976 Ga0466967_0137262 Ga0466967_0137262_35_1312 353
19 3300013296 Ga0157374_10003117 Ga0157374_100031175 354
20 3300013297 Ga0157378_10096561 Ga0157378_100965614 354
21 3300014969 Ga0157376_10016613 Ga0157376_100166134 354
22 3300050512 nmdc:mga0n895_106789_c1 nmdc:mga0n895_106789_c1_933_2201 354
23 3300021441 Ga0213871_10029605 Ga0213871_100296051 358
24 3300039438 Ga0436360_1029516 Ga0436360_1029516_1363_2697 358
25 3300005436 Ga0070713_100306086 Ga0070713_1003060861 359
26 3300005468 Ga0070707_100117144 Ga0070707_1001171442 359
27 3300014969 Ga0157376_10008238 Ga0157376_100082383 359
28 3300025910 Ga0207684_10005325 Ga0207684_100053254 359
29 3300005468 Ga0070707_100288825 Ga0070707_1002888251 362
30 3300005471 Ga0070698_100148542 Ga0070698_1001485421 362
31 3300048915 Ga0496112_0024604 Ga0496112_0024604_174_1469 362
32 3300005290 Ga0065712_10020636 Ga0065712_100206361 363
33 3300005329 Ga0070683_100020858 Ga0070683_1000208584 363
34 3300005467 Ga0070706_100039723 Ga0070706_1000397235 363
35 3300005615 Ga0070702_100053681 Ga0070702_1000536812 363
36 3300005983 Ga0081540_1030560 Ga0081540_10305602 363
37 3300014969 Ga0157376_10128530 Ga0157376_101285302 363
38 3300025944 Ga0207661_10036423 Ga0207661_100364231 363
39 3300025944 Ga0207661_10229873 Ga0207661_102298732 363
40 3300028800 Ga0265338_10007129 Ga0265338_100071299 363
41 3300028800 Ga0265338_10087351 Ga0265338_100873513 363
42 3300031239 Ga0265328_10007897 Ga0265328_100078974 363
43 3300031240 Ga0265320_10002457 Ga0265320_100024578 363
44 3300031240 Ga0265320_10014485 Ga0265320_100144854 363
45 3300031249 Ga0265339_10006430 Ga0265339_100064302 363
46 3300031249 Ga0265339_10011223 Ga0265339_100112235 363
47 3300031711 Ga0265314_10005673 Ga0265314_100056732 363
48 3300031711 Ga0265314_10069675 Ga0265314_100696752 363
49 3300031712 Ga0265342_10001079 Ga0265342_1000107924 363
50 3300031712 Ga0265342_10009018 Ga0265342_100090184 363
51 3300035172 Ga0373955_0002728 Ga0373955_0002728_4266_5525 363
52 3300035724 Ga0373933_0003060 Ga0373933_0003060_1900_3159 363
53 3300036401 Ga0373937_0007029 Ga0373937_0007029_1079_2338 363
54 3300036401 Ga0373937_0269202 Ga0373937_0269202_308_1567 363
55 3300039447 Ga0436361_0022533 Ga0436361_0022533_590_1846 363
56 3300039447 Ga0436361_0497604 Ga0436361_0497604_1728_3011 363
57 3300039437 Ga0436365_0625239 Ga0436365_0625239_214_1497 364
58 3300005539 Ga0068853_100000002 Ga0068853_1000000025 366
59 3300025986 Ga0207658_10123136 Ga0207658_101231362 366
60 3300026041 Ga0207639_10000012 Ga0207639_1000001242 366
61 3300037853 Ga0436364_1269197 Ga0436364_1269197_329_1621 366
62 3300039453 Ga0436362_0871592 Ga0436362_0871592_1409_2701 366
63 3300037853 Ga0436364_0881125 Ga0436364_0881125_1464_2777 367
64 3300050492 nmdc:mga0yw44_917_c1 nmdc:mga0yw44_917_c1_6632_7894 367
65 3300010159 Ga0099796_10047630 Ga0099796_100476301 368
66 3300014969 Ga0157376_10006403 Ga0157376_100064038 368
67 3300037466 Ga0395898_0029841 Ga0395898_0029841_2289_3545 368
68 3300038443 Ga0395901_0068485 Ga0395901_0068485_754_2010 368
69 3300003659 JGI25404J52841_10004044 JGI25404J52841_100040443 369
70 3300005328 Ga0070676_10042376 Ga0070676_100423762 369
71 3300005355 Ga0070671_100043235 Ga0070671_1000432354 369
72 3300005356 Ga0070674_100172744 Ga0070674_1001727441 369
73 3300005434 Ga0070709_10023679 Ga0070709_100236793 369
74 3300005983 Ga0081540_1001169 Ga0081540_10011698 369
75 3300006175 Ga0070712_100045691 Ga0070712_1000456912 369
76 3300009147 Ga0114129_10003549 Ga0114129_1000354915 369
77 3300010159 Ga0099796_10036415 Ga0099796_100364151 369
78 3300013296 Ga0157374_10046127 Ga0157374_100461274 369
79 3300013296 Ga0157374_10122067 Ga0157374_101220672 369
80 3300013297 Ga0157378_10047448 Ga0157378_100474484 369
81 3300013297 Ga0157378_10124819 Ga0157378_101248192 369
82 3300013297 Ga0157378_10134744 Ga0157378_101347442 369
83 3300013297 Ga0157378_10169448 Ga0157378_101694481 369
84 3300013306 Ga0163162_10050794 Ga0163162_100507943 369
85 3300014969 Ga0157376_10018937 Ga0157376_100189373 369
86 3300025907 Ga0207645_10027512 Ga0207645_100275123 369
87 3300025910 Ga0207684_10118040 Ga0207684_101180402 369
88 3300025915 Ga0207693_10026998 Ga0207693_100269984 369
89 3300025915 Ga0207693_10044812 Ga0207693_100448124 369
90 3300025916 Ga0207663_10059401 Ga0207663_100594012 369
91 3300025923 Ga0207681_10037460 Ga0207681_100374603 369
92 3300025931 Ga0207644_10151571 Ga0207644_101515711 369
93 3300025939 Ga0207665_10155499 Ga0207665_101554992 369
94 3300026121 Ga0207683_10010879 Ga0207683_100108797 369
95 3300039437 Ga0436365_0226896 Ga0436365_0226896_7291_8580 369
96 3300039437 Ga0436365_1385742 Ga0436365_1385742_972_2249 369
97 3300039450 Ga0436363_0281163 Ga0436363_0281163_102_1409 369
98 3300048905 Ga0496102_0061363 Ga0496102_0061363_95_1393 369
99 3300048910 Ga0496107_0136165 Ga0496107_0136165_161_1456 369
100 3300050507 nmdc:mga05p37_180772_c1 nmdc:mga05p37_180772_c1_133_1482 369
101 3300000546 LJNas_1000931 LJNas_10009313 370
102 3300005334 Ga0068869_100012860 Ga0068869_1000128601 370
103 3300005434 Ga0070709_10092292 Ga0070709_100922922 370
104 3300005436 Ga0070713_100021181 Ga0070713_1000211812 370
105 3300005467 Ga0070706_100044273 Ga0070706_1000442732 370
106 3300005467 Ga0070706_100044506 Ga0070706_1000445061 370
107 3300005468 Ga0070707_100206295 Ga0070707_1002062951 370
108 3300005471 Ga0070698_100042931 Ga0070698_1000429316 370
109 3300005471 Ga0070698_100046805 Ga0070698_1000468052 370
110 3300005536 Ga0070697_100032875 Ga0070697_1000328752 370
111 3300005539 Ga0068853_100272068 Ga0068853_1002720681 370
112 3300005842 Ga0068858_100015174 Ga0068858_1000151745 370
113 3300005843 Ga0068860_100041822 Ga0068860_1000418223 370
114 3300005937 Ga0081455_10030943 Ga0081455_100309432 370
115 3300005983 Ga0081540_1001169 Ga0081540_10011693 370
116 3300005983 Ga0081540_1003984 Ga0081540_10039844 370
117 3300005983 Ga0081540_1019239 Ga0081540_10192392 370
118 3300005983 Ga0081540_1060348 Ga0081540_10603481 370
119 3300005983 Ga0081540_1068993 Ga0081540_10689932 370
120 3300006028 Ga0070717_10139172 Ga0070717_101391723 370
121 3300006173 Ga0070716_100004551 Ga0070716_1000045514 370
122 3300006175 Ga0070712_100005491 Ga0070712_1000054913 370
123 3300006175 Ga0070712_100036960 Ga0070712_1000369603 370
124 3300006175 Ga0070712_100038833 Ga0070712_1000388331 370
125 3300006175 Ga0070712_100038833 Ga0070712_1000388332 370
126 3300006175 Ga0070712_100093656 Ga0070712_1000936562 370
127 3300006852 Ga0075433_10240179 Ga0075433_102401791 370
128 3300006871 Ga0075434_100155394 Ga0075434_1001553942 370
129 3300009147 Ga0114129_10241473 Ga0114129_102414732 370
130 3300009176 Ga0105242_10128938 Ga0105242_101289383 370
131 3300009177 Ga0105248_10048544 Ga0105248_100485441 370
132 3300009177 Ga0105248_10276211 Ga0105248_102762112 370
133 3300009553 Ga0105249_10110502 Ga0105249_101105022 370
134 3300013296 Ga0157374_10158493 Ga0157374_101584931 370
135 3300013297 Ga0157378_10048472 Ga0157378_100484723 370
136 3300013306 Ga0163162_10281072 Ga0163162_102810721 370
137 3300021361 Ga0213872_10000080 Ga0213872_1000008075 370
138 3300021361 Ga0213872_10011973 Ga0213872_100119732 370
139 3300021361 Ga0213872_10013330 Ga0213872_100133302 370
140 3300021361 Ga0213872_10025175 Ga0213872_100251752 370
141 3300021384 Ga0213876_10025133 Ga0213876_100251331 370
142 3300021384 Ga0213876_10034712 Ga0213876_100347121 370
143 3300024227 Ga0228598_1004529 Ga0228598_10045293 370
144 3300025904 Ga0207647_10012127 Ga0207647_100121271 370
145 3300025906 Ga0207699_10013650 Ga0207699_100136505 370
146 3300025910 Ga0207684_10006675 Ga0207684_100066751 370
147 3300025910 Ga0207684_10071504 Ga0207684_100715042 370
148 3300025910 Ga0207684_10126332 Ga0207684_101263321 370
149 3300025915 Ga0207693_10008933 Ga0207693_100089338 370
150 3300025915 Ga0207693_10013046 Ga0207693_100130469 370
151 3300025915 Ga0207693_10021412 Ga0207693_100214126 370
152 3300025915 Ga0207693_10043780 Ga0207693_100437801 370
153 3300025915 Ga0207693_10049171 Ga0207693_100491712 370
154 3300025915 Ga0207693_10066864 Ga0207693_100668642 370
155 3300025916 Ga0207663_10007784 Ga0207663_100077846 370
156 3300025916 Ga0207663_10030397 Ga0207663_100303973 370
157 3300025916 Ga0207663_10032624 Ga0207663_100326243 370
158 3300025928 Ga0207700_10044984 Ga0207700_100449843 370
159 3300025933 Ga0207706_10239591 Ga0207706_102395912 370
160 3300025941 Ga0207711_10051343 Ga0207711_100513434 370
161 3300025942 Ga0207689_10010141 Ga0207689_1001014112 370
162 3300026023 Ga0207677_10186946 Ga0207677_101869461 370
163 3300026035 Ga0207703_10005683 Ga0207703_100056838 370
164 3300028381 Ga0268264_10003046 Ga0268264_1000304613 370
165 3300028381 Ga0268264_10003257 Ga0268264_100032575 370
166 3300037853 Ga0436364_1039576 Ga0436364_1039576_130_1464 370
167 3300039437 Ga0436365_1197382 Ga0436365_1197382_1388_2710 370
168 3300039437 Ga0436365_1739553 Ga0436365_1739553_18719_20053 370
169 3300039447 Ga0436361_0014087 Ga0436361_0014087_434_1753 370
170 3300039447 Ga0436361_0107925 Ga0436361_0107925_1680_3014 370
171 3300039447 Ga0436361_0247001 Ga0436361_0247001_40302_41636 370
172 3300039447 Ga0436361_1046218 Ga0436361_1046218_8588_9889 370
173 3300039447 Ga0436361_1199494 Ga0436361_1199494_781_2097 370
174 3300048929 Ga0496126_0000004 Ga0496126_0000004_535191_536483 370
175 3300050507 nmdc:mga05p37_63722_c1 nmdc:mga05p37_63722_c1_2329_3660 370
176 3300050510 nmdc:mga06r32_258278_c1 nmdc:mga06r32_258278_c1_229_1560 370
177 3300050512 nmdc:mga0n895_81858_c1 nmdc:mga0n895_81858_c1_1613_2911 370

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00201

UDPGT

UDP-glucoronosyl and UDP-glucosyl transferase

230

472

0.85

PF06722

EryCIII-like_C

Erythromycin biosynthesis protein CIII-like, C-terminal domain

320

464

0.85

PF04101

Glyco_tran_28_C

Glycosyltransferase family 28 C-terminal domain

313

455

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vlb-assembly2.cif.gz_B crystal structure of ugt109a1 from bacillus 0.8685 1 368
7vm0-assembly1.cif.gz_A crystal structure of yojk from b.subtilis in complex with udp 0.8578 1 369
2iya-assembly2.cif.gz_B the crystal structure of macrolide glycosyltransferases: a blueprint for antibiotic engineering 0.8518 2 369
6kqx-assembly1.cif.gz_A crystal structure of yijc from b. subtilis in complex with udp 0.8471 2 369
7yan-assembly2.cif.gz_D-2 udp-glucuronosyltransferase2b17 c-terminal domain 0.8457 250 366
ID Description Score Start End Superfamily
2iyaB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9481 248 369 3.40.50.2000
af_A0A2R8QIE5_80_195_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9276 317 366 3.40.50.2000
af_P9WFR1_255_409_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9126 245 369 3.40.50.2000
af_Q10941_279_451_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8986 250 367 3.40.50.2000
3otgA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8909 238 370 3.40.50.2000
ID Description Score Start End GO Terms
AF-E8V5U5-F1-model_v4 Glycosyltransferase, MGT family 0.986 1 369 GO:0008194
GO:0017000
AF-E8V5U5-F1-model_v4 Glycosyltransferase, MGT family 0.9807 1 369 GO:0008194
GO:0017000
AF-G8NYK2-F1-model_v4 Glycosyltransferase, MGT family 0.9788 1 369 GO:0008194
GO:0017000
AF-G8NYK2-F1-model_v4 Glycosyltransferase, MGT family 0.971 1 369 GO:0008194
GO:0017000
AF-G8NYJ9-F1-model_v4 Glycosyltransferase, MGT family 0.9697 1 367 GO:0008194
GO:0017000

Feature Viewer

pLDDT pTM Quality
94.17 0.91 High
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Predicted Structure (AlphaFold2)

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