F269988

General Info

Members Datasets Scaffolds Average Seq Length
177 99 168 258

Family's Representative Sequence

Representative Sequence 3300006353|Ga0075370_10040083|Ga0075370_100400831
Length 291
Sequence MGVPPALLVGHGHILHRGHDTLDLTPRRSISHASPVDAITAGPARTKPDSVAAAAVEAARDALVADVGAADVGEHLGVVGEGERVVSHQFACTRKGYVGWHWSVTVARASRQRQVTVDEVVLVPGDAALVAPEWVPYRERLQPGDMSVDDDDPRLVPTYSFGDDPLDTDAKAQVRQVAKDLGLGRVRTLSPEGRDLAAQRWADGDGGPDAPLAQAAPDRCHSCGFLMRIAGPLAESFGVCANGDANDDGRVVTFDHGCGAHSEVRIAKKHAPVPIPDHVFDTLTVDEVEAW

Samples

Sample ID Description Type Environment
1 2643221641 Nocardioides sp. Root122 Isolate Unclassified
2 2739367898 Nocardioides sp. CF479 Isolate Unclassified
3 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
4 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
5 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
6 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
7 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
8 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
16 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
21 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
22 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
29 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
30 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
31 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
32 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
33 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
34 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
35 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
36 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
37 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
38 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
39 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
40 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
41 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
42 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
43 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
44 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
45 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
46 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
47 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
48 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
49 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
50 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
51 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
52 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
53 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
54 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
55 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
56 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
57 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
72 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
73 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
74 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
75 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
76 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
77 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
78 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
79 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
80 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
81 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
82 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
83 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
86 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
87 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
88 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
89 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
90 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
91 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
92 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
93 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
94 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
95 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
96 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
97 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
98 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
99 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.92
Metatranscriptomes 0
Isolates 5.08

Biome Distribution

Category Percentage (%)
Aerial Root 1.13
Bulb 0
Endosphere 26.55
Nodule 0.56
Rhizoplane 2.26
Rhizosphere 64.41
Stem 0
Stem Tuber 0
Unclassified 5.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070674_100651989 3300005356 Bacteria 895
2 Ga0070667_100256740 3300005367 Bacteria 1564
3 Ga0070684_100041052 3300005535 Bacteria 3987
4 Ga0068864_100416719 3300005618 Bacteria 1279
5 Ga0081539_10067202 3300005985 Bacteria 1940
6 Ga0075365_10001912 3300006038 Bacteria 9819
7 Ga0075365_10009558 3300006038 Bacteria 5586
8 Ga0075365_10014206 3300006038 Bacteria 4785
9 Ga0075365_10017966 3300006038 Bacteria 4339
10 Ga0075365_10026863 3300006038 Bacteria 3657
11 Ga0075365_10092692 3300006038 Bacteria 2060
12 Ga0075365_10414635 3300006038 Bacteria 951
13 Ga0075368_10000624 3300006042 Bacteria 10700
14 Ga0075363_100005008 3300006048 Bacteria 5861
15 Ga0075363_100079333 3300006048 Bacteria 1793
16 Ga0075364_10005373 3300006051 Bacteria 7437
17 Ga0075364_10011762 3300006051 Bacteria 5328
18 Ga0075364_10076545 3300006051 Bacteria 2208
19 Ga0075364_10336181 3300006051 Bacteria 1029
20 Ga0075362_10006470 3300006177 Bacteria 4370
21 Ga0075362_10263806 3300006177 Bacteria 849
22 Ga0075367_10000442 3300006178 Bacteria 15389
23 Ga0075367_10013348 3300006178 Bacteria 4413
24 Ga0075367_10040401 3300006178 Bacteria 2723
25 Ga0075370_10040083 3300006353 Bacteria 2641
26 Ga0075370_10061740 3300006353 Bacteria 2135
27 Ga0075370_10164111 3300006353 Bacteria 1304
28 Ga0105249_10308897 3300009553 Bacteria 1589
29 Ga0207688_10229566 3300025901 Bacteria 1120
30 Ga0207643_10016310 3300025908 Bacteria 4050
31 Ga0207691_10251131 3300025940 Bacteria 1527
32 Ga0207661_10116503 3300025944 Bacteria 2268
33 Ga0207658_10345014 3300025986 Bacteria 1295
34 Ga0207674_10125280 3300026116 Bacteria 2535
35 Ga0209813_10025720 3300027866 Bacteria 1696
36 Ga0209813_10083833 3300027866 Bacteria 1059
37 Ga0316177_1169228 3300030731 Bacteria 1387
38 Ga0307516_10307291 3300031730 Bacteria 1260
39 Ga0307413_10150334 3300031824 Bacteria 1621
40 Ga0307410_10213520 3300031852 Bacteria 1480
41 Ga0307406_10398127 3300031901 Bacteria 1091
42 Ga0307407_10121116 3300031903 Bacteria 1659
43 Ga0307409_100244832 3300031995 Bacteria 1635
44 Ga0307409_100287011 3300031995 Bacteria 1524
45 Ga0395900_0019391 3300037418 Bacteria 6937
46 Ga0395905_0074926 3300037471 Bacteria 3172
47 Ga0395901_0108751 3300038443 Bacteria 2910
48 Ga0451835_0917871 3300041492 Bacteria 895
49 Ga0451837_1482563 3300041494 Bacteria 1078
50 Ga0450888_004607 3300042126 Bacteria 1444
51 Ga0439460_0009398 3300042461 Bacteria 2483
52 Ga0466965_0053190 3300044683 Bacteria 2012
53 Ga0466965_0057743 3300044683 Bacteria 1935
54 Ga0466966_0014316 3300044684 Bacteria 5252
55 Ga0466966_0304899 3300044684 Bacteria 957
56 Ga0466963_0266806 3300044694 Bacteria 1202
57 Ga0466971_0039328 3300044719 Bacteria 2123
58 Ga0466970_0002962 3300044765 Bacteria 8231
59 Ga0466957_0022214 3300044842 Bacteria 3741
60 Ga0466957_0055402 3300044842 Bacteria 2423
61 Ga0466960_0000839 3300044901 Bacteria 10852
62 Ga0466960_0105082 3300044901 Bacteria 1459
63 Ga0466959_0122903 3300045049 Bacteria 1844
64 Ga0466967_0086048 3300045976 Bacteria 2847
65 Ga0466967_0210967 3300045976 Bacteria 1842
66 Ga0466967_0637157 3300045976 Bacteria 1053
67 Ga0495603_0270163 3300046455 Bacteria 978
68 Ga0495629_0216428 3300046459 Bacteria 1322
69 Ga0496102_0037043 3300048905 Bacteria 4399
70 Ga0496110_0534258 3300048913 Bacteria 1066
71 Ga0496114_0048860 3300048917 Bacteria 3520
72 Ga0496114_0529947 3300048917 Bacteria 1041
73 Ga0501031_0027584 3300049568 Bacteria 3702
74 Ga0501031_0031043 3300049568 Bacteria 3487
75 Ga0501031_0041466 3300049568 Bacteria 3005
76 Ga0501032_0008924 3300049569 Bacteria 7291
77 Ga0501032_0290129 3300049569 Bacteria 1058
78 Ga0501033_0004425 3300049570 Bacteria 11243
79 Ga0501036_0009806 3300049572 Bacteria 7887
80 Ga0501037_0010471 3300049573 Bacteria 6811
81 Ga0501037_0118912 3300049573 Bacteria 1901
82 Ga0501038_0003525 3300049574 Bacteria 14571
83 Ga0501038_0008844 3300049574 Bacteria 9239
84 Ga0501038_0155679 3300049574 Bacteria 1861
85 Ga0501038_0325908 3300049574 Bacteria 1201
86 Ga0501039_0013935 3300049575 Bacteria 6151
87 Ga0501039_0040357 3300049575 Bacteria 3603
88 Ga0501039_0051882 3300049575 Bacteria 3173
89 Ga0501039_0065387 3300049575 Bacteria 2821
90 Ga0501040_0010147 3300049576 Bacteria 6156
91 Ga0501040_0328485 3300049576 Bacteria 1094
92 Ga0501040_0457180 3300049576 Bacteria 919
93 Ga0501041_0212506 3300049577 Bacteria 1213
94 Ga0501042_0007882 3300049578 Bacteria 7007
95 Ga0501042_0107906 3300049578 Bacteria 2004
96 Ga0501042_0194899 3300049578 Bacteria 1461
97 Ga0501042_0282776 3300049578 Bacteria 1198
98 Ga0501043_0049269 3300049579 Bacteria 3312
99 Ga0501043_0093238 3300049579 Bacteria 2367
100 Ga0501043_0210420 3300049579 Bacteria 1507
101 Ga0501043_0214695 3300049579 Bacteria 1490
102 Ga0501046_0000982 3300049580 Bacteria 27848
103 Ga0501046_0009461 3300049580 Bacteria 8421
104 Ga0501046_0046286 3300049580 Bacteria 3453
105 Ga0501047_0039688 3300049581 Bacteria 4552
106 Ga0501047_0242291 3300049581 Bacteria 1653
107 Ga0501048_0004300 3300049582 Bacteria 10859
108 Ga0501048_0026109 3300049582 Bacteria 4254
109 Ga0501048_0111986 3300049582 Bacteria 1927
110 Ga0501068_0124514 3300049584 Bacteria 1609
111 Ga0501068_0417652 3300049584 Bacteria 866
112 Ga0501069_0007366 3300049585 Bacteria 5773
113 Ga0501069_0254545 3300049585 Bacteria 1025
114 Ga0501070_0010305 3300049586 Bacteria 7902
115 Ga0501070_0308710 3300049586 Bacteria 1288
116 Ga0501071_0008168 3300049587 Bacteria 6905
117 Ga0501071_0024245 3300049587 Bacteria 4242
118 Ga0501071_0042473 3300049587 Bacteria 3258
119 Ga0501071_0201271 3300049587 Bacteria 1496
120 Ga0501072_0102112 3300049588 Bacteria 2279
121 Ga0501074_0015857 3300049590 Bacteria 5480
122 Ga0501074_0062011 3300049590 Bacteria 2694
123 Ga0501075_0091948 3300049591 Bacteria 2302
124 Ga0501075_0350359 3300049591 Bacteria 1125
125 Ga0501075_0492709 3300049591 Bacteria 935
126 Ga0501076_0037227 3300049592 Bacteria 3814
127 Ga0501076_0083218 3300049592 Bacteria 2569
128 Ga0501076_0385955 3300049592 Bacteria 1151
129 Ga0501077_0239015 3300049593 Bacteria 1154
130 Ga0501077_0306121 3300049593 Bacteria 1013
131 Ga0501079_0184692 3300049741 Bacteria 1627
132 Ga0501080_0035365 3300049742 Bacteria 4662
133 Ga0501080_0315285 3300049742 Bacteria 1417
134 Ga0501081_0151551 3300049743 Bacteria 1666
135 Ga0501035_0018116 3300049822 Bacteria 6489
136 Ga0501044_0028829 3300049823 Bacteria 5855
137 Ga0501044_0201925 3300049823 Bacteria 1946
138 Ga0501045_0022553 3300049824 Bacteria 4509
139 Ga0501045_0034606 3300049824 Bacteria 3667
140 nmdc:mga03683_11739_c1 3300050489 Bacteria 3182
141 nmdc:mga03n38_14367_c1 3300050490 Bacteria 3033
142 nmdc:mga00v17_133796_c1 3300050491 Bacteria 1586
143 nmdc:mga00v17_267277_c1 3300050491 Bacteria 1110
144 nmdc:mga00v17_48521_c1 3300050491 Bacteria 2574
145 nmdc:mga00v17_83632_c1 3300050491 Bacteria 1996
146 nmdc:mga0yw44_142950_c1 3300050492 Bacteria 1556
147 nmdc:mga0yw44_15253_c1 3300050492 Bacteria 4109
148 nmdc:mga0yw44_225224_c1 3300050492 Bacteria 1244
149 nmdc:mga0yw44_33269_c1 3300050492 Bacteria 3011
150 nmdc:mga0yw44_38227_c1 3300050492 Bacteria 2838
151 nmdc:mga0yw44_52619_c1 3300050492 Bacteria 2469
152 nmdc:mga0yw44_83931_c1 3300050492 Bacteria 2002
153 nmdc:mga06z11_12207_c1 3300050494 Bacteria 3731
154 nmdc:mga06z11_23122_c1 3300050494 Bacteria 2914
155 nmdc:mga06z11_24644_c1 3300050494 Bacteria 2842
156 nmdc:mga06z11_81510_c1 3300050494 Bacteria 1737
157 nmdc:mga04h51_150667_c1 3300050495 Bacteria 889
158 nmdc:mga04h51_1848_c1 3300050495 Bacteria 4947
159 nmdc:mga07m45_109261_c1 3300050496 Bacteria 1592
160 nmdc:mga07m45_114683_c1 3300050496 Bacteria 1553
161 nmdc:mga08y16_270227_c1 3300050511 Bacteria 1755
162 Ga0500644_0000276 3300053088 Bacteria 28535
163 Ga0500593_001166 3300053117 Bacteria 9480
164 Ga0501084_0032593 3300054114 Bacteria 4358
165 Ga0501084_0148380 3300054114 Bacteria 1976
166 Ga0501084_0454916 3300054114 Bacteria 1082
167 Ga0466962_0042326 3300061719 Bacteria 2180
168 Ga0530510_0227492 3300061734 Bacteria 1387

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044901 Ga0466960_0105082 Ga0466960_0105082_15_740 219
2 3300044683 Ga0466965_0053190 Ga0466965_0053190_1155_1946 234
3 3300042126 Ga0450888_004607 Ga0450888_004607_58_813 235
4 3300042461 Ga0439460_0009398 Ga0439460_0009398_488_1243 235
5 3300049569 Ga0501032_0290129 Ga0501032_0290129_278_1006 235
6 3300049591 Ga0501075_0492709 Ga0501075_0492709_125_889 236
7 3300053088 Ga0500644_0000276 Ga0500644_0000276_14203_15003 238
8 3300005985 Ga0081539_10067202 Ga0081539_100672022 240
9 3300049584 Ga0501068_0417652 Ga0501068_0417652_63_800 240
10 3300049570 Ga0501033_0004425 Ga0501033_0004425_6339_7118 241
11 3300049579 Ga0501043_0210420 Ga0501043_0210420_540_1319 241
12 3300049579 Ga0501043_0214695 Ga0501043_0214695_506_1285 241
13 3300049580 Ga0501046_0000982 Ga0501046_0000982_24020_24799 241
14 3300044684 Ga0466966_0304899 Ga0466966_0304899_10_807 243
15 3300044683 Ga0466965_0057743 Ga0466965_0057743_430_1245 245
16 3300044765 Ga0466970_0002962 Ga0466970_0002962_5664_6479 245
17 3300044842 Ga0466957_0022214 Ga0466957_0022214_2849_3664 245
18 3300025901 Ga0207688_10229566 Ga0207688_102295662 246
19 3300005535 Ga0070684_100041052 Ga0070684_1000410525 247
20 3300025944 Ga0207661_10116503 Ga0207661_101165032 247
21 3300049593 Ga0501077_0239015 Ga0501077_0239015_230_1012 247
22 3300026116 Ga0207674_10125280 Ga0207674_101252802 248
23 3300049823 Ga0501044_0201925 Ga0501044_0201925_779_1540 248
24 3300006051 Ga0075364_10336181 Ga0075364_103361812 251
25 iso_pu_bacteria 2643221641 2644229388 251
26 iso_pu_bacteria 2739367898 2740168088 251
27 iso_pu_bacteria 8054609563 8054613707 251
28 3300006178 Ga0075367_10000442 Ga0075367_1000044210 252
29 3300031995 Ga0307409_100244832 Ga0307409_1002448323 252
30 3300031995 Ga0307409_100287011 Ga0307409_1002870112 252
31 3300041492 Ga0451835_0917871 Ga0451835_0917871_41_835 252
32 3300041494 Ga0451837_1482563 Ga0451837_1482563_20_814 252
33 3300049568 Ga0501031_0031043 Ga0501031_0031043_2049_2843 252
34 3300049568 Ga0501031_0041466 Ga0501031_0041466_1875_2654 252
35 3300049569 Ga0501032_0008924 Ga0501032_0008924_3230_4009 252
36 3300049572 Ga0501036_0009806 Ga0501036_0009806_3917_4696 252
37 3300049574 Ga0501038_0155679 Ga0501038_0155679_993_1787 252
38 3300049578 Ga0501042_0282776 Ga0501042_0282776_360_1154 252
39 3300049579 Ga0501043_0093238 Ga0501043_0093238_1509_2288 252
40 3300049580 Ga0501046_0009461 Ga0501046_0009461_3621_4400 252
41 3300049581 Ga0501047_0039688 Ga0501047_0039688_1876_2655 252
42 3300049582 Ga0501048_0004300 Ga0501048_0004300_6295_7074 252
43 3300049586 Ga0501070_0010305 Ga0501070_0010305_3613_4392 252
44 3300049590 Ga0501074_0062011 Ga0501074_0062011_1496_2275 252
45 3300049742 Ga0501080_0035365 Ga0501080_0035365_3733_4512 252
46 3300049823 Ga0501044_0028829 Ga0501044_0028829_3179_3958 252
47 3300050491 nmdc:mga00v17_267277_c1 nmdc:mga00v17_267277_c1_28_822 252
48 3300050492 nmdc:mga0yw44_142950_c1 nmdc:mga0yw44_142950_c1_365_1159 252
49 3300050494 nmdc:mga06z11_23122_c1 nmdc:mga06z11_23122_c1_1426_2220 252
50 3300054114 Ga0501084_0148380 Ga0501084_0148380_688_1467 252
51 3300006038 Ga0075365_10026863 Ga0075365_100268634 253
52 3300037418 Ga0395900_0019391 Ga0395900_0019391_1692_2468 253
53 3300044901 Ga0466960_0000839 Ga0466960_0000839_4977_5765 253
54 3300049568 Ga0501031_0027584 Ga0501031_0027584_1652_2434 253
55 3300049573 Ga0501037_0118912 Ga0501037_0118912_179_961 253
56 3300049575 Ga0501039_0051882 Ga0501039_0051882_439_1221 253
57 3300049575 Ga0501039_0065387 Ga0501039_0065387_1512_2294 253
58 3300049576 Ga0501040_0328485 Ga0501040_0328485_168_950 253
59 3300049578 Ga0501042_0194899 Ga0501042_0194899_66_848 253
60 3300049586 Ga0501070_0308710 Ga0501070_0308710_458_1240 253
61 3300049587 Ga0501071_0042473 Ga0501071_0042473_1986_2768 253
62 3300049824 Ga0501045_0034606 Ga0501045_0034606_776_1558 253
63 3300050492 nmdc:mga0yw44_83931_c1 nmdc:mga0yw44_83931_c1_556_1347 253
64 3300061734 Ga0530510_0227492 Ga0530510_0227492_344_1126 253
65 3300006038 Ga0075365_10009558 Ga0075365_100095584 254
66 3300006038 Ga0075365_10014206 Ga0075365_100142063 254
67 3300006051 Ga0075364_10011762 Ga0075364_100117623 254
68 3300006177 Ga0075362_10006470 Ga0075362_100064704 254
69 3300006353 Ga0075370_10164111 Ga0075370_101641113 254
70 3300031901 Ga0307406_10398127 Ga0307406_103981272 254
71 3300038443 Ga0395901_0108751 Ga0395901_0108751_1092_1880 254
72 3300044684 Ga0466966_0014316 Ga0466966_0014316_405_1199 254
73 3300044694 Ga0466963_0266806 Ga0466963_0266806_278_1072 254
74 3300044719 Ga0466971_0039328 Ga0466971_0039328_1230_2024 254
75 3300044842 Ga0466957_0055402 Ga0466957_0055402_338_1132 254
76 3300045049 Ga0466959_0122903 Ga0466959_0122903_378_1172 254
77 3300045976 Ga0466967_0086048 Ga0466967_0086048_1553_2347 254
78 3300045976 Ga0466967_0210967 Ga0466967_0210967_341_1135 254
79 3300048905 Ga0496102_0037043 Ga0496102_0037043_3366_4160 254
80 3300049573 Ga0501037_0010471 Ga0501037_0010471_2827_3615 254
81 3300049574 Ga0501038_0003525 Ga0501038_0003525_10427_11215 254
82 3300049575 Ga0501039_0040357 Ga0501039_0040357_2387_3175 254
83 3300049576 Ga0501040_0457180 Ga0501040_0457180_104_892 254
84 3300049577 Ga0501041_0212506 Ga0501041_0212506_268_1056 254
85 3300049578 Ga0501042_0107906 Ga0501042_0107906_694_1482 254
86 3300049580 Ga0501046_0046286 Ga0501046_0046286_2222_3010 254
87 3300049581 Ga0501047_0242291 Ga0501047_0242291_269_1057 254
88 3300049582 Ga0501048_0026109 Ga0501048_0026109_2530_3318 254
89 3300049587 Ga0501071_0024245 Ga0501071_0024245_893_1681 254
90 3300049592 Ga0501076_0083218 Ga0501076_0083218_1752_2540 254
91 3300049741 Ga0501079_0184692 Ga0501079_0184692_683_1471 254
92 3300049822 Ga0501035_0018116 Ga0501035_0018116_3137_3925 254
93 3300050489 nmdc:mga03683_11739_c1 nmdc:mga03683_11739_c1_1142_1927 254
94 3300050492 nmdc:mga0yw44_225224_c1 nmdc:mga0yw44_225224_c1_254_1039 254
95 3300050494 nmdc:mga06z11_24644_c1 nmdc:mga06z11_24644_c1_1174_1959 254
96 3300050511 nmdc:mga08y16_270227_c1 nmdc:mga08y16_270227_c1_762_1550 254
97 3300061719 Ga0466962_0042326 Ga0466962_0042326_262_1056 254
98 3300006038 Ga0075365_10092692 Ga0075365_100926922 255
99 3300006038 Ga0075365_10414635 Ga0075365_104146352 255
100 3300006178 Ga0075367_10013348 Ga0075367_100133482 255
101 3300030731 Ga0316177_1169228 Ga0316177_11692282 255
102 3300031730 Ga0307516_10307291 Ga0307516_103072911 255
103 3300031824 Ga0307413_10150334 Ga0307413_101503341 255
104 3300031903 Ga0307407_10121116 Ga0307407_101211162 255
105 3300037471 Ga0395905_0074926 Ga0395905_0074926_1654_2451 255
106 3300050491 nmdc:mga00v17_83632_c1 nmdc:mga00v17_83632_c1_225_1016 255
107 3300050492 nmdc:mga0yw44_52619_c1 nmdc:mga0yw44_52619_c1_1373_2164 255
108 3300050494 nmdc:mga06z11_81510_c1 nmdc:mga06z11_81510_c1_795_1592 255
109 3300006048 Ga0075363_100005008 Ga0075363_1000050085 256
110 3300006177 Ga0075362_10263806 Ga0075362_102638061 256
111 3300031852 Ga0307410_10213520 Ga0307410_102135202 256
112 3300049574 Ga0501038_0008844 Ga0501038_0008844_1130_1918 256
113 3300049575 Ga0501039_0013935 Ga0501039_0013935_483_1271 256
114 3300049576 Ga0501040_0010147 Ga0501040_0010147_2245_3033 256
115 3300049578 Ga0501042_0007882 Ga0501042_0007882_2719_3507 256
116 3300049579 Ga0501043_0049269 Ga0501043_0049269_853_1641 256
117 3300049582 Ga0501048_0111986 Ga0501048_0111986_599_1387 256
118 3300049585 Ga0501069_0007366 Ga0501069_0007366_2841_3629 256
119 3300049587 Ga0501071_0008168 Ga0501071_0008168_2327_3115 256
120 3300049588 Ga0501072_0102112 Ga0501072_0102112_1206_1994 256
121 3300049590 Ga0501074_0015857 Ga0501074_0015857_3560_4348 256
122 3300049591 Ga0501075_0091948 Ga0501075_0091948_431_1219 256
123 3300049592 Ga0501076_0037227 Ga0501076_0037227_2156_2944 256
124 3300049742 Ga0501080_0315285 Ga0501080_0315285_369_1157 256
125 3300049743 Ga0501081_0151551 Ga0501081_0151551_650_1438 256
126 3300049824 Ga0501045_0022553 Ga0501045_0022553_1260_2048 256
127 3300050490 nmdc:mga03n38_14367_c1 nmdc:mga03n38_14367_c1_310_1098 256
128 3300050491 nmdc:mga00v17_133796_c1 nmdc:mga00v17_133796_c1_693_1481 256
129 3300050491 nmdc:mga00v17_48521_c1 nmdc:mga00v17_48521_c1_971_1759 256
130 3300050492 nmdc:mga0yw44_38227_c1 nmdc:mga0yw44_38227_c1_2023_2811 256
131 3300050496 nmdc:mga07m45_109261_c1 nmdc:mga07m45_109261_c1_719_1507 256
132 3300054114 Ga0501084_0032593 Ga0501084_0032593_1241_2029 256
133 3300005367 Ga0070667_100256740 Ga0070667_1002567402 257
134 3300006038 Ga0075365_10001912 Ga0075365_100019125 257
135 3300006353 Ga0075370_10040083 Ga0075370_100400831 257
136 3300025986 Ga0207658_10345014 Ga0207658_103450142 257
137 3300046455 Ga0495603_0270163 Ga0495603_0270163_56_883 257
138 3300046459 Ga0495629_0216428 Ga0495629_0216428_310_1137 257
139 3300050492 nmdc:mga0yw44_33269_c1 nmdc:mga0yw44_33269_c1_129_923 257
140 3300053117 Ga0500593_001166 Ga0500593_001166_3743_4534 257
141 iso_pu_bacteria 2773857762 2774396370 257
142 iso_pu_bacteria 2808606439 2809198022 257
143 iso_pu_bacteria 2811994878 2812353285 257
144 iso_pu_bacteria 2891968417 2891969089 257
145 3300005356 Ga0070674_100651989 Ga0070674_1006519891 258
146 3300005618 Ga0068864_100416719 Ga0068864_1004167192 258
147 3300006038 Ga0075365_10017966 Ga0075365_100179662 258
148 3300006042 Ga0075368_10000624 Ga0075368_100006247 258
149 3300006048 Ga0075363_100079333 Ga0075363_1000793332 258
150 3300006051 Ga0075364_10005373 Ga0075364_100053735 258
151 3300006051 Ga0075364_10076545 Ga0075364_100765452 258
152 3300006178 Ga0075367_10040401 Ga0075367_100404012 258
153 3300006353 Ga0075370_10061740 Ga0075370_100617402 258
154 3300009553 Ga0105249_10308897 Ga0105249_103088972 258
155 3300025908 Ga0207643_10016310 Ga0207643_100163104 258
156 3300025940 Ga0207691_10251131 Ga0207691_102511312 258
157 3300027866 Ga0209813_10025720 Ga0209813_100257202 258
158 3300027866 Ga0209813_10083833 Ga0209813_100838331 258
159 3300045976 Ga0466967_0637157 Ga0466967_0637157_228_1037 258
160 3300048913 Ga0496110_0534258 Ga0496110_0534258_166_960 258
161 3300048917 Ga0496114_0048860 Ga0496114_0048860_2100_2891 258
162 3300048917 Ga0496114_0529947 Ga0496114_0529947_132_926 258
163 3300049574 Ga0501038_0325908 Ga0501038_0325908_97_900 258
164 3300049584 Ga0501068_0124514 Ga0501068_0124514_658_1452 258
165 3300049585 Ga0501069_0254545 Ga0501069_0254545_194_988 258
166 3300049587 Ga0501071_0201271 Ga0501071_0201271_528_1331 258
167 3300049591 Ga0501075_0350359 Ga0501075_0350359_256_1059 258
168 3300049592 Ga0501076_0385955 Ga0501076_0385955_124_927 258
169 3300049593 Ga0501077_0306121 Ga0501077_0306121_28_831 258
170 3300050492 nmdc:mga0yw44_15253_c1 nmdc:mga0yw44_15253_c1_357_1148 258
171 3300050494 nmdc:mga06z11_12207_c1 nmdc:mga06z11_12207_c1_471_1262 258
172 3300050495 nmdc:mga04h51_150667_c1 nmdc:mga04h51_150667_c1_54_857 258
173 3300050495 nmdc:mga04h51_1848_c1 nmdc:mga04h51_1848_c1_4051_4842 258
174 3300050496 nmdc:mga07m45_114683_c1 nmdc:mga07m45_114683_c1_376_1179 258
175 3300054114 Ga0501084_0454916 Ga0501084_0454916_175_978 258
176 iso_pu_bacteria 2984576629 2984579554 258
177 iso_pu_bacteria 2990256926 2990257161 258

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11228

DUF3027

Protein of unknown function (DUF3027)

73

265

0.94

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pLDDT pTM Quality
60.87 0.47 Low
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Predicted Structure (AlphaFold2)

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