F269898

General Info

Members Datasets Scaffolds Average Seq Length
177 113 354 226

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100203299|Ga0068860_1002032992
Length 275
Sequence MAKQGRSRPQKEIAPHGTAERSDSRSPEESIPKPRGKQRLVERKEERPVRGAARSRKKRFDIDAVLALIEPAIAPFPKAAMFELAERGHSTVFEQLVACILSIRTFDEVSLPAAFKLFKELPTPKAIAKADEETIDGLINTVTFHRPKAATIKEIARRTIEDFKGELPCDADVLSAFKGVGPKCTHLSLGVACRLPVISVDIHVHRVTNRWGYVAATTPEKTMAQLENVLPKKHWIDINRLLVPFGKHICTGVKPKCSTCPVLQYCRQVGVTTHR

Samples

Sample ID Description Type Environment
1 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
23 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
35 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
38 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
57 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
58 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
59 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
60 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
65 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
66 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
67 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
68 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
69 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
70 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
75 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
76 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
77 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
78 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
79 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
80 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
81 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
82 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
89 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
90 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
91 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
96 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
97 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
98 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
99 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
100 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
101 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
102 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
106 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
107 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
108 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
109 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
110 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
112 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
113 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.44
Metatranscriptomes 0.56
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.69
Rhizosphere 92.09
Stem 0
Stem Tuber 0
Unclassified 16.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068860_100203299 3300005843 Bacteria 1920
2 Ga0070658_10021501 3300005327 Bacteria 5171
3 Ga0070683_100030045 3300005329 Bacteria 4928
4 Ga0070683_100546392 3300005329 Bacteria 1108
5 Ga0070680_100341711 3300005336 Bacteria 1272
6 Ga0068868_100034631 3300005338 Bacteria 3899
7 Ga0070660_100633020 3300005339 Bacteria 895
8 Ga0070714_100022096 3300005435 Bacteria 5213
9 Ga0070699_100001388 3300005518 Bacteria 22270
10 Ga0070679_100005559 3300005530 Bacteria 11682
11 Ga0070679_100211187 3300005530 Bacteria 1905
12 Ga0070679_100441087 3300005530 Unclassified 1247
13 Ga0070684_100038434 3300005535 Bacteria 4111
14 Ga0070695_100594158 3300005545 Unclassified 868
15 Ga0070696_100145910 3300005546 Bacteria 1733
16 Ga0068855_100491449 3300005563 Bacteria 1335
17 Ga0068855_100797161 3300005563 Bacteria 1004
18 Ga0068855_100888486 3300005563 Bacteria 942
19 Ga0068856_100108481 3300005614 Bacteria 2773
20 Ga0081455_10026069 3300005937 Bacteria 5386
21 Ga0081539_10002370 3300005985 Bacteria 26996
22 Ga0075428_100017056 3300006844 Bacteria 8024
23 Ga0075428_100034745 3300006844 Bacteria 5559
24 Ga0075428_100170679 3300006844 Bacteria 2358
25 Ga0075428_100307612 3300006844 Unclassified 1704
26 Ga0075428_101018915 3300006844 Bacteria 876
27 Ga0075431_100038012 3300006847 Unclassified 4956
28 Ga0075431_100176657 3300006847 Bacteria 2193
29 Ga0075433_10027793 3300006852 Unclassified 4803
30 Ga0075433_10254766 3300006852 Unclassified 1557
31 Ga0075434_100033245 3300006871 Bacteria 5089
32 Ga0075429_100069251 3300006880 Bacteria 3072
33 Ga0075429_100205928 3300006880 Unclassified 1723
34 Ga0068865_100240092 3300006881 Bacteria 1425
35 Ga0075436_100041750 3300006914 Bacteria 3165
36 Ga0075436_100087333 3300006914 Unclassified 2166
37 Ga0105240_10130495 3300009093 Bacteria 3015
38 Ga0105240_10160326 3300009093 Bacteria 2672
39 Ga0111539_10089032 3300009094 Unclassified 3627
40 Ga0111539_10432948 3300009094 Bacteria 1532
41 Ga0105245_10005769 3300009098 Bacteria 10863
42 Ga0114129_10053668 3300009147 Bacteria 5653
43 Ga0114129_10068404 3300009147 Bacteria 4952
44 Ga0114129_10205964 3300009147 Unclassified 2661
45 Ga0114129_10216555 3300009147 Bacteria 2586
46 Ga0114129_10560379 3300009147 Bacteria 1485
47 Ga0105241_10048736 3300009174 Bacteria 3224
48 Ga0157373_10010327 3300013100 Bacteria 6877
49 Ga0157373_10355362 3300013100 Bacteria 1045
50 Ga0157370_10016491 3300013104 Bacteria 7476
51 Ga0157369_10008419 3300013105 Bacteria 11827
52 Ga0157369_10389061 3300013105 Bacteria 1447
53 Ga0157372_10033222 3300013307 Bacteria 5665
54 Ga0157372_10254188 3300013307 Bacteria 2040
55 Ga0163163_10770225 3300014325 Bacteria 1026
56 Ga0182007_10141214 3300015262 Bacteria 815
57 Ga0206353_11813884 3300020082 Bacteria 1206
58 Ga0213876_10071415 3300021384 Bacteria 1833
59 Ga0213875_10000026 3300021388 Bacteria 196301
60 Ga0213875_10060652 3300021388 Bacteria 1769
61 Ga0207692_10026823 3300025898 Bacteria 2706
62 Ga0207705_10168478 3300025909 Bacteria 1648
63 Ga0207705_10179756 3300025909 Bacteria 1596
64 Ga0207684_10027690 3300025910 Bacteria 4827
65 Ga0207707_10348313 3300025912 Bacteria 1277
66 Ga0207660_10361550 3300025917 Bacteria 1164
67 Ga0207657_10173725 3300025919 Unclassified 1745
68 Ga0207649_10030360 3300025920 Bacteria 3200
69 Ga0207652_10188678 3300025921 Unclassified 1854
70 Ga0207652_10196348 3300025921 Bacteria 1816
71 Ga0207652_10347608 3300025921 Bacteria 1338
72 Ga0207694_10751118 3300025924 Bacteria 823
73 Ga0207664_10023881 3300025929 Bacteria 4588
74 Ga0207665_10000319 3300025939 Bacteria 33336
75 Ga0207665_10128531 3300025939 Bacteria 1796
76 Ga0207661_10332023 3300025944 Bacteria 1369
77 Ga0207667_10025466 3300025949 Bacteria 6473
78 Ga0207677_10413328 3300026023 Bacteria 1147
79 Ga0207702_10026506 3300026078 Bacteria 4811
80 Ga0207698_10063053 3300026142 Bacteria 2898
81 Ga0207428_10012031 3300027907 Bacteria 7616
82 Ga0268264_10169736 3300028381 Bacteria 1972
83 Ga0307405_10016447 3300031731 Bacteria 4034
84 Ga0307413_10050899 3300031824 Unclassified 2492
85 Ga0307410_10001876 3300031852 Bacteria 9805
86 Ga0307407_10000721 3300031903 Bacteria 10790
87 Ga0307407_10475104 3300031903 Bacteria 912
88 Ga0307407_10595336 3300031903 Bacteria 823
89 Ga0307412_10022719 3300031911 Bacteria 3850
90 Ga0307409_100007540 3300031995 Bacteria 6519
91 Ga0307409_100408275 3300031995 Bacteria 1299
92 Ga0307416_100006135 3300032002 Bacteria 7488
93 Ga0307414_10119973 3300032004 Bacteria 2020
94 Ga0307411_10037818 3300032005 Bacteria 3038
95 Ga0307411_10787403 3300032005 Unclassified 836
96 Ga0307415_100026693 3300032126 Bacteria 3647
97 Ga0307415_100048778 3300032126 Bacteria 2859
98 Ga0307415_100277731 3300032126 Bacteria 1376
99 Ga0373959_0000102 3300034820 Bacteria 19373
100 Ga0373932_0047757 3300035112 Bacteria 1259
101 Ga0373939_0008331 3300035114 Bacteria 2542
102 Ga0373941_0005238 3300035115 Bacteria 3040
103 Ga0373931_0049304 3300035691 Bacteria 2236
104 Ga0395900_0135686 3300037418 Bacteria 2521
105 Ga0395905_0022123 3300037471 Bacteria 6015
106 Ga0395905_0619368 3300037471 Bacteria 984
107 Ga0436364_0785008 3300037853 Bacteria 174976
108 Ga0436364_1561045 3300037853 Bacteria 1844
109 Ga0436365_0355030 3300039437 Bacteria 4803
110 Ga0436365_0485888 3300039437 Unclassified 2522
111 Ga0436365_0710794 3300039437 Bacteria 2003
112 Ga0436365_1280220 3300039437 Bacteria 2095
113 Ga0436365_1825626 3300039437 Bacteria 20114
114 Ga0436363_0343230 3300039450 Bacteria 1049
115 Ga0436362_0222762 3300039453 Bacteria 2180
116 Ga0439449_0001183 3300042007 Bacteria 10238
117 Ga0439458_0008858 3300042157 Unclassified 2245
118 Ga0451577_0032690 3300042876 Bacteria 4688
119 Ga0466969_0046774 3300044656 Bacteria 2144
120 Ga0453683_0258733 3300044673 Bacteria 1110
121 Ga0453683_0537891 3300044673 Unclassified 760
122 Ga0466966_0025004 3300044684 Bacteria 3903
123 Ga0466966_0137404 3300044684 Bacteria 1494
124 Ga0453684_0118748 3300044712 Bacteria 3198
125 Ga0453684_0309201 3300044712 Unclassified 1794
126 Ga0453684_0680207 3300044712 Bacteria 1120
127 Ga0453684_0863715 3300044712 Bacteria 971
128 Ga0453684_1033321 3300044712 Unclassified 872
129 Ga0466957_0375286 3300044842 Unclassified 969
130 Ga0466959_0013982 3300045049 Bacteria 5827
131 Ga0466959_0057248 3300045049 Bacteria 2842
132 Ga0466959_0151177 3300045049 Bacteria 1636
133 Ga0451576_0004398 3300045051 Bacteria 18344
134 Ga0451576_0008309 3300045051 Bacteria 12203
135 Ga0466958_0237685 3300045836 Unclassified 1164
136 Ga0496100_0047074 3300048903 Bacteria 2777
137 Ga0496112_0013534 3300048915 Bacteria 7536
138 Ga0496113_0164490 3300048916 Bacteria 1755
139 Ga0501039_0127716 3300049575 Bacteria 1995
140 Ga0501039_0159984 3300049575 Bacteria 1770
141 Ga0501041_0023975 3300049577 Bacteria 3661
142 Ga0501047_0019015 3300049581 Bacteria 6589
143 Ga0501047_0103424 3300049581 Bacteria 2728
144 Ga0501070_0298198 3300049586 Bacteria 1313
145 Ga0501071_0135481 3300049587 Bacteria 1832
146 Ga0501071_0188136 3300049587 Bacteria 1548
147 Ga0501072_0354188 3300049588 Unclassified 1165
148 Ga0501074_0089070 3300049590 Bacteria 2210
149 Ga0501075_0152457 3300049591 Bacteria 1761
150 Ga0501257_025995 3300049686 Unclassified 1395
151 Ga0501079_0067174 3300049741 Bacteria 2767
152 Ga0501080_0043130 3300049742 Bacteria 4200
153 Ga0501081_0056258 3300049743 Bacteria 2718
154 Ga0501035_0000109 3300049822 Bacteria 99544
155 Ga0501035_0192152 3300049822 Bacteria 1755
156 Ga0501035_0355563 3300049822 Bacteria 1225
157 Ga0501044_0242386 3300049823 Bacteria 1746
158 nmdc:mga05p37_106782_c1 3300050507 Bacteria 3445
159 nmdc:mga05p37_163185_c1 3300050507 Unclassified 2720
160 nmdc:mga05p37_363819_c1 3300050507 Bacteria 1700
161 nmdc:mga05p37_645782_c1 3300050507 Unclassified 1186
162 nmdc:mga09592_27812_c1 3300050508 Bacteria 4693
163 nmdc:mga09592_398972_c1 3300050508 Unclassified 1189
164 nmdc:mga09592_712606_c1 3300050508 Unclassified 853
165 nmdc:mga06r32_148441_c1 3300050510 Bacteria 2322
166 nmdc:mga06r32_182684_c1 3300050510 Bacteria 2083
167 nmdc:mga06r32_4065_c1 3300050510 Bacteria 13111
168 nmdc:mga06r32_422748_c1 3300050510 Bacteria 1314
169 nmdc:mga08y16_11701_c1 3300050511 Bacteria 9220
170 nmdc:mga08y16_140634_c1 3300050511 Bacteria 2509
171 nmdc:mga0n895_880653_c1 3300050512 Bacteria 882
172 nmdc:mga08x19_48088_c1 3300050514 Unclassified 2732
173 nmdc:mga08x19_51839_c1 3300050514 Bacteria 2637
174 nmdc:mga0a205_85248_c1 3300050515 Bacteria 3051
175 nmdc:mga0a205_96471_c1 3300050515 Bacteria 2855
176 Ga0501084_0714796 3300054114 Bacteria 845
177 Ga0530510_0162520 3300061734 Unclassified 1652
178 Ga0068860_100203299
179 Ga0070658_10021501
180 Ga0070683_100030045
181 Ga0070683_100546392
182 Ga0070680_100341711
183 Ga0068868_100034631
184 Ga0070660_100633020
185 Ga0070714_100022096
186 Ga0070699_100001388
187 Ga0070679_100005559
188 Ga0070679_100211187
189 Ga0070679_100441087
190 Ga0070684_100038434
191 Ga0070695_100594158
192 Ga0070696_100145910
193 Ga0068855_100491449
194 Ga0068855_100797161
195 Ga0068855_100888486
196 Ga0068856_100108481
197 Ga0081455_10026069
198 Ga0081539_10002370
199 Ga0075428_100017056
200 Ga0075428_100034745
201 Ga0075428_100170679
202 Ga0075428_100307612
203 Ga0075428_101018915
204 Ga0075431_100038012
205 Ga0075431_100176657
206 Ga0075433_10027793
207 Ga0075433_10254766
208 Ga0075434_100033245
209 Ga0075429_100069251
210 Ga0075429_100205928
211 Ga0068865_100240092
212 Ga0075436_100041750
213 Ga0075436_100087333
214 Ga0105240_10130495
215 Ga0105240_10160326
216 Ga0111539_10089032
217 Ga0111539_10432948
218 Ga0105245_10005769
219 Ga0114129_10053668
220 Ga0114129_10068404
221 Ga0114129_10205964
222 Ga0114129_10216555
223 Ga0114129_10560379
224 Ga0105241_10048736
225 Ga0157373_10010327
226 Ga0157373_10355362
227 Ga0157370_10016491
228 Ga0157369_10008419
229 Ga0157369_10389061
230 Ga0157372_10033222
231 Ga0157372_10254188
232 Ga0163163_10770225
233 Ga0182007_10141214
234 Ga0206353_11813884
235 Ga0213876_10071415
236 Ga0213875_10000026
237 Ga0213875_10060652
238 Ga0207692_10026823
239 Ga0207705_10168478
240 Ga0207705_10179756
241 Ga0207684_10027690
242 Ga0207707_10348313
243 Ga0207660_10361550
244 Ga0207657_10173725
245 Ga0207649_10030360
246 Ga0207652_10188678
247 Ga0207652_10196348
248 Ga0207652_10347608
249 Ga0207694_10751118
250 Ga0207664_10023881
251 Ga0207665_10000319
252 Ga0207665_10128531
253 Ga0207661_10332023
254 Ga0207667_10025466
255 Ga0207677_10413328
256 Ga0207702_10026506
257 Ga0207698_10063053
258 Ga0207428_10012031
259 Ga0268264_10169736
260 Ga0307405_10016447
261 Ga0307413_10050899
262 Ga0307410_10001876
263 Ga0307407_10000721
264 Ga0307407_10475104
265 Ga0307407_10595336
266 Ga0307412_10022719
267 Ga0307409_100007540
268 Ga0307409_100408275
269 Ga0307416_100006135
270 Ga0307414_10119973
271 Ga0307411_10037818
272 Ga0307411_10787403
273 Ga0307415_100026693
274 Ga0307415_100048778
275 Ga0307415_100277731
276 Ga0373959_0000102
277 Ga0373932_0047757
278 Ga0373939_0008331
279 Ga0373941_0005238
280 Ga0373931_0049304
281 Ga0395900_0135686
282 Ga0395905_0022123
283 Ga0395905_0619368
284 Ga0436364_0785008
285 Ga0436364_1561045
286 Ga0436365_0355030
287 Ga0436365_0485888
288 Ga0436365_0710794
289 Ga0436365_1280220
290 Ga0436365_1825626
291 Ga0436363_0343230
292 Ga0436362_0222762
293 Ga0439449_0001183
294 Ga0439458_0008858
295 Ga0451577_0032690
296 Ga0466969_0046774
297 Ga0453683_0258733
298 Ga0453683_0537891
299 Ga0466966_0025004
300 Ga0466966_0137404
301 Ga0453684_0118748
302 Ga0453684_0309201
303 Ga0453684_0680207
304 Ga0453684_0863715
305 Ga0453684_1033321
306 Ga0466957_0375286
307 Ga0466959_0013982
308 Ga0466959_0057248
309 Ga0466959_0151177
310 Ga0451576_0004398
311 Ga0451576_0008309
312 Ga0466958_0237685
313 Ga0496100_0047074
314 Ga0496112_0013534
315 Ga0496113_0164490
316 Ga0501039_0127716
317 Ga0501039_0159984
318 Ga0501041_0023975
319 Ga0501047_0019015
320 Ga0501047_0103424
321 Ga0501070_0298198
322 Ga0501071_0135481
323 Ga0501071_0188136
324 Ga0501072_0354188
325 Ga0501074_0089070
326 Ga0501075_0152457
327 Ga0501257_025995
328 Ga0501079_0067174
329 Ga0501080_0043130
330 Ga0501081_0056258
331 Ga0501035_0000109
332 Ga0501035_0192152
333 Ga0501035_0355563
334 Ga0501044_0242386
335 nmdc:mga05p37_106782_c1
336 nmdc:mga05p37_163185_c1
337 nmdc:mga05p37_363819_c1
338 nmdc:mga05p37_645782_c1
339 nmdc:mga09592_27812_c1
340 nmdc:mga09592_398972_c1
341 nmdc:mga09592_712606_c1
342 nmdc:mga06r32_148441_c1
343 nmdc:mga06r32_182684_c1
344 nmdc:mga06r32_4065_c1
345 nmdc:mga06r32_422748_c1
346 nmdc:mga08y16_11701_c1
347 nmdc:mga08y16_140634_c1
348 nmdc:mga0n895_880653_c1
349 nmdc:mga08x19_48088_c1
350 nmdc:mga08x19_51839_c1
351 nmdc:mga0a205_85248_c1
352 nmdc:mga0a205_96471_c1
353 Ga0501084_0714796
354 Ga0530510_0162520

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10576

EndIII_4Fe-2S

Iron-sulfur binding domain of endonuclease III

250

266

0.99

PF00730

HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

97

232

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1p59-assembly1.cif.gz_A structure of a non-covalent endonuclease iii-dna complex 0.9265 37 214
1orp-assembly1.cif.gz_A structure of a trapped endonuclease iii-dna covalent intermediate: estranged-adenine complex 0.9216 37 214
2abk-assembly1.cif.gz_A refinement of the native structure of endonuclease iii to a resolution of 1.85 angstrom 0.9064 37 219
7yhp-assembly1.cif.gz_A cryoem structure of arabidopsis ros1 in complex with 5mc-dsdna at 3.1 angstroms resolution 0.8779 37 213
4uob-assembly1.cif.gz_A crystal structure of deinococcus radiodurans endonuclease iii-3 0.8684 37 217
ID Description Score Start End Superfamily
af_P0AB83_21_132_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9582 37 141 1.10.340.30
af_Q4CY47_40_146_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.956 38 135 1.10.340.30
af_Q9SIC4_169_271_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9537 38 135 1.10.340.30
af_C6KSY9_237_342_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9499 38 135 1.10.340.30
af_O35980_108_217_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9478 38 138 1.10.340.30
ID Description Score Start End GO Terms
AF-A0A4Q3UYK9-F1-model_v4 Endonuclease III 0.9921 13 221 GO:0000703
GO:0003906
GO:0004519
GO:0006285
GO:0006289
GO:0016829
AF-B9XRV4-F1-model_v4 DNA-(Apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.9914 2 221 GO:0000703
GO:0006285
GO:0006289
GO:0140078
AF-A0A4Q3W0E1-F1-model_v4 Endonuclease III 0.9909 1 221 GO:0000703
GO:0003906
GO:0004519
GO:0006285
GO:0006289
GO:0016829
AF-A0A6I2GUN8-F1-model_v4 Endonuclease III 0.9907 1 221 GO:0000703
GO:0003906
GO:0004519
GO:0006285
GO:0006289
GO:0016829
GO:0051536
AF-A0A7Y6X7R2-F1-model_v4 Endonuclease III 0.9892 3 221 GO:0000703
GO:0003906
GO:0004519
GO:0006285
GO:0006289
GO:0016829
GO:0046872
GO:0051539

Map