F269446

General Info

Members Datasets Scaffolds Average Seq Length
177 138 128 494

Family's Representative Sequence

Representative Sequence 3300005289|Ga0065704_10071351|Ga0065704_100713518
Length 536
Sequence MKGFSIFSNLKNYLFLKRLNFFDTILKSAKNSIFGTNKKAMTTTEISTQLEQYFLQFRNNIIGIDQEFISPFGKKKIIYTDWTASGRLYRPIEEKLMNEFGPFVANTHTETTVSGTAMTMAYHHARNIIKKHVNANEDDILIADGTGMTGVINKFQRILGLKIPENLREFTAIPDEKRPIVFVSHMEHHSNQTSWLETIAKVEVIPACEKGLLCLDSFKALLEKYKNHTLKIASITSCSNVTGIKTPYYEVAKLMHQNNGVCFVDFACSAPYVDINMHPEDSEAYLDAIFFSPHKFLGGPGTSGILIFNKKLYRNMIPDNPGGGTVSWTNPWGEHKYLDNIEEREDGGTPGFLQVIKTALAIQLKEKMGVANILKREHEIIDYIFSELGAVSNINILADQHKDRLGVISFYIDDLHFNLGVKLLNDKFGIQTRGGCSCAGTYGHYLLHVDEETSHDLTNLITAGDLIRKPGWIRMSIHPTTTNAEIQFVCESIKAVAANHQEWAKDYEYHKNSNEFTHRNASNPEKDLVKQWFGTI

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
3 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
4 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
5 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
6 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
7 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
8 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
9 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
10 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
11 2738541295 Bacillus sp. OK085 Isolate Unclassified
12 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
13 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
14 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
15 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
16 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
17 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
18 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
19 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
20 2818991441 Niallia circulans 3243 Isolate Rhizosphere
21 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
22 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
23 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
24 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
25 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
26 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
27 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
28 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
29 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
30 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
31 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
32 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
33 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
34 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
35 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
36 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
37 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
38 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
39 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
40 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
41 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
42 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
43 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
44 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
45 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
46 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
47 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
48 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
49 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
50 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
51 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
52 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
53 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
54 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
55 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
56 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
57 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
58 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
59 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
60 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
61 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
62 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
63 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
64 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
82 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
84 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
86 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
88 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
91 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
105 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
106 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
110 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
111 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
112 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
117 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
130 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
131 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
132 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
133 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
134 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
135 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
136 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
137 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
138 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.32
Metatranscriptomes 0
Isolates 27.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.95
Nodule 3.39
Rhizoplane 2.26
Rhizosphere 69.49
Stem 0
Stem Tuber 0
Unclassified 20.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1416553 2162886007 Bacteria 5794
2 Ga0055532_1000030 3300003758 Bacteria 232738
3 Ga0065714_10005214 3300005288 Bacteria 4213
4 Ga0065704_10071351 3300005289 Bacteria 11575
5 Ga0068868_100003518 3300005338 Bacteria 10908
6 Ga0070661_100035017 3300005344 Bacteria 3644
7 Ga0070675_100088818 3300005354 Bacteria 2587
8 Ga0070671_100064742 3300005355 Bacteria 3045
9 Ga0070673_100097332 3300005364 Bacteria 2416
10 Ga0070667_100032751 3300005367 Bacteria 4337
11 Ga0070664_100005068 3300005564 Bacteria 10568
12 Ga0068857_100007281 3300005577 Bacteria 9531
13 Ga0068863_100101595 3300005841 Bacteria 2734
14 Ga0068860_100008289 3300005843 Bacteria 10345
15 Ga0081540_1000475 3300005983 Bacteria 39504
16 Ga0099824_1009312 3300006942 Bacteria 12152
17 Ga0079104_1000321 3300006946 Bacteria 60074
18 Ga0099826_10007074 3300006948 Bacteria 8237
19 Ga0105251_10036808 3300009011 Bacteria 2405
20 Ga0105244_10000081 3300009036 Bacteria 106439
21 Ga0105244_10000108 3300009036 Bacteria 86321
22 Ga0157373_10000002 3300013100 Bacteria 750094
23 Ga0157371_10026541 3300013102 Bacteria 4208
24 Ga0157370_10000262 3300013104 Bacteria 66893
25 Ga0157370_10009086 3300013104 Bacteria 10660
26 Ga0157369_10002103 3300013105 Bacteria 24007
27 Ga0157378_10016736 3300013297 Bacteria 6424
28 Ga0157378_10062994 3300013297 Unclassified 3313
29 Ga0182006_1002549 3300015261 Bacteria 9884
30 Ga0163161_10000063 3300017792 Bacteria 109669
31 Ga0163161_10006675 3300017792 Bacteria 7987
32 Ga0163161_10148688 3300017792 Bacteria 1779
33 Ga0209147_100065 3300025229 Bacteria 232777
34 Ga0207655_1000128 3300025728 Bacteria 149987
35 Ga0207655_1000159 3300025728 Bacteria 123598
36 Ga0207713_1036846 3300025735 Bacteria 2093
37 Ga0207649_10023274 3300025920 Bacteria 3586
38 Ga0207659_10071362 3300025926 Bacteria 2535
39 Ga0207644_10034011 3300025931 Bacteria 3566
40 Ga0207679_10000371 3300025945 Bacteria 32584
41 Ga0207641_10070552 3300026088 Bacteria 3002
42 Ga0207674_10008669 3300026116 Bacteria 11712
43 Ga0209281_1000244 3300027111 Bacteria 109979
44 Ga0209371_1011409 3300027312 Bacteria 2642
45 Ga0209489_118184 3300027361 Bacteria 2851
46 Ga0209995_1002100 3300027471 Bacteria 3133
47 Ga0209282_1031252 3300027666 Bacteria 3268
48 Ga0209974_10013559 3300027876 Bacteria 2715
49 Ga0209974_10018062 3300027876 Bacteria 2338
50 Ga0265319_1000024 3300028563 Bacteria 144981
51 Ga0265318_10004836 3300028577 Bacteria 6437
52 Ga0307515_10000092 3300028794 Bacteria 212425
53 Ga0268256_1013337 3300030500 Bacteria 2496
54 Ga0265320_10010602 3300031240 Bacteria 5473
55 Ga0265327_10001111 3300031251 Bacteria 37197
56 Ga0265327_10016341 3300031251 Bacteria 4717
57 Ga0265327_10052192 3300031251 Bacteria 2130
58 Ga0307408_100010555 3300031548 Bacteria 6091
59 Ga0307408_100037836 3300031548 Bacteria 3400
60 Ga0265314_10009302 3300031711 Bacteria 8315
61 Ga0316576_10065856 3300031727 Bacteria 2664
62 Ga0307405_10000001 3300031731 Bacteria 1731270
63 Ga0307413_10000439 3300031824 Bacteria 13517
64 Ga0307410_10000191 3300031852 Bacteria 22695
65 Ga0307406_10000143 3300031901 Bacteria 42246
66 Ga0307407_10001412 3300031903 Bacteria 8673
67 Ga0307416_100000418 3300032002 Bacteria 21636
68 Ga0307416_100056964 3300032002 Bacteria 3158
69 Ga0307414_10000086 3300032004 Bacteria 85265
70 Ga0307414_10045632 3300032004 Bacteria 3002
71 Ga0307414_10073863 3300032004 Bacteria 2468
72 Ga0307414_10096740 3300032004 Bacteria 2210
73 Ga0307411_10000001 3300032005 Bacteria 931810
74 Ga0316583_10018916 3300032133 Bacteria 2475
75 Ga0316574_0058471 3300035398 Bacteria 2415
76 Ga0316582_0142613 3300036647 Bacteria 1616
77 Ga0395900_0034135 3300037418 Bacteria 5237
78 Ga0395898_0025193 3300037466 Bacteria 5998
79 Ga0400490_14011 3300038726 Bacteria 20964
80 Ga0400483_039738 3300039062 Bacteria 21993
81 Ga0439447_007576 3300041407 Bacteria 3430
82 Ga0439448_0012530 3300042005 Bacteria 2538
83 Ga0451577_0000723 3300042876 Bacteria 51136
84 Ga0451577_0011929 3300042876 Bacteria 8192
85 Ga0451577_0015106 3300042876 Bacteria 7184
86 Ga0451577_0167379 3300042876 Bacteria 1980
87 Ga0453684_0000033 3300044712 Bacteria 734012
88 Ga0453684_0000256 3300044712 Bacteria 228862
89 Ga0453684_0008738 3300044712 Bacteria 17999
90 Ga0453684_0011365 3300044712 Bacteria 14955
91 Ga0453684_0023237 3300044712 Bacteria 9147
92 Ga0453684_0031495 3300044712 Bacteria 7451
93 Ga0453684_0042908 3300044712 Bacteria 6088
94 Ga0453684_0055034 3300044712 Bacteria 5175
95 Ga0453684_0156122 3300044712 Bacteria 2705
96 Ga0453684_0198382 3300044712 Bacteria 2341
97 Ga0451576_0002738 3300045051 Bacteria 25581
98 Ga0451576_0011114 3300045051 Bacteria 10270
99 Ga0451576_0019444 3300045051 Bacteria 7412
100 Ga0451576_0057983 3300045051 Bacteria 4048
101 Ga0451576_0081517 3300045051 Bacteria 3365
102 Ga0451576_0184325 3300045051 Bacteria 2179
103 Ga0495616_0007745 3300046513 Bacteria 6416
104 Ga0495643_0000357 3300046522 Bacteria 62250
105 Ga0495643_0011473 3300046522 Bacteria 5394
106 Ga0495686_0011879 3300047472 Bacteria 6123
107 Ga0495626_0002109 3300048091 Bacteria 14456
108 Ga0496103_0053397 3300048906 Bacteria 2505
109 Ga0496110_0054029 3300048913 Bacteria 3533
110 Ga0496115_0014851 3300048918 Bacteria 5906
111 Ga0496116_0000032 3300048919 Bacteria 419997
112 Ga0496121_0134104 3300048924 Bacteria 1848
113 Ga0496122_0021948 3300048925 Bacteria 5691
114 Ga0496122_0040502 3300048925 Bacteria 3701
115 Ga0496124_0037003 3300048927 Bacteria 4248
116 Ga0496125_0000059 3300048928 Bacteria 264149
117 Ga0496125_0000177 3300048928 Bacteria 140730
118 Ga0496126_0018636 3300048929 Bacteria 6870
119 Ga0496126_0054840 3300048929 Bacteria 3608
120 Ga0501238_000096 3300049671 Bacteria 14042
121 Ga0501249_000037 3300049679 Bacteria 63492
122 Ga0501249_002318 3300049679 Bacteria 3850
123 Ga0501266_000019 3300049763 Bacteria 114355
124 Ga0500646_0006687 3300053090 Bacteria 2933
125 Ga0500641_0000019 3300053096 Bacteria 123198
126 Ga0500641_0000072 3300053096 Bacteria 41388
127 Ga0500641_0000511 3300053096 Bacteria 13960
128 Ga0500658_0000003 3300053134 Bacteria 512506

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049679 Ga0501249_002318 Ga0501249_002318_22_1320 432
2 3300048924 Ga0496121_0134104 Ga0496121_0134104_469_1791 440
3 3300048925 Ga0496122_0040502 Ga0496122_0040502_2043_3476 441
4 3300009011 Ga0105251_10036808 Ga0105251_100368082 458
5 3300009036 Ga0105244_10000081 Ga0105244_10000081110 458
6 3300025728 Ga0207655_1000159 Ga0207655_10001595 458
7 3300025735 Ga0207713_1036846 Ga0207713_10368462 458
8 3300048929 Ga0496126_0018636 Ga0496126_0018636_5403_6806 467
9 3300037418 Ga0395900_0034135 Ga0395900_0034135_1634_3049 471
10 3300037466 Ga0395898_0025193 Ga0395898_0025193_3681_5096 471
11 3300046522 Ga0495643_0011473 Ga0495643_0011473_1647_3098 481
12 3300044712 Ga0453684_0008738 Ga0453684_0008738_15664_17130 482
13 3300045051 Ga0451576_0019444 Ga0451576_0019444_445_1911 482
14 iso_pu_bacteria 2593339131 2595091109 482
15 iso_pu_bacteria 2757320391 2757566401 482
16 iso_pu_bacteria 2775507177 2777764299 482
17 iso_pu_bacteria 2775507192 2777836100 482
18 iso_pu_bacteria 2936340661 2936342243 482
19 3300048091 Ga0495626_0002109 Ga0495626_0002109_11455_12906 483
20 iso_pu_bacteria 2519899754 2520882364 484
21 iso_pu_bacteria 2816332280 2817416357 484
22 iso_pu_bacteria 2919683626 2919685986 484
23 3300003758 Ga0055532_1000030 Ga0055532_100003075 486
24 3300005983 Ga0081540_1000475 Ga0081540_10004757 486
25 3300025229 Ga0209147_100065 Ga0209147_10006575 486
26 3300042876 Ga0451577_0015106 Ga0451577_0015106_3786_5246 486
27 3300048906 Ga0496103_0053397 Ga0496103_0053397_162_1637 486
28 3300005564 Ga0070664_100005068 Ga0070664_1000050683 487
29 3300005577 Ga0068857_100007281 Ga0068857_1000072813 487
30 3300025920 Ga0207649_10023274 Ga0207649_100232742 487
31 3300025945 Ga0207679_10000371 Ga0207679_1000037119 487
32 3300026116 Ga0207674_10008669 Ga0207674_100086695 487
33 3300027312 Ga0209371_1011409 Ga0209371_10114091 487
34 3300030500 Ga0268256_1013337 Ga0268256_10133371 487
35 3300042005 Ga0439448_0012530 Ga0439448_0012530_664_2127 487
36 3300042876 Ga0451577_0011929 Ga0451577_0011929_1117_2580 487
37 3300044712 Ga0453684_0055034 Ga0453684_0055034_1307_2773 487
38 3300045051 Ga0451576_0002738 Ga0451576_0002738_11030_12496 487
39 3300045051 Ga0451576_0011114 Ga0451576_0011114_4997_6460 487
40 3300005355 Ga0070671_100064742 Ga0070671_1000647422 488
41 3300005364 Ga0070673_100097332 Ga0070673_1000973322 488
42 3300006942 Ga0099824_1009312 Ga0099824_10093123 488
43 3300006946 Ga0079104_1000321 Ga0079104_100032136 488
44 3300006948 Ga0099826_10007074 Ga0099826_100070747 488
45 3300025931 Ga0207644_10034011 Ga0207644_100340113 488
46 3300027111 Ga0209281_1000244 Ga0209281_100024437 488
47 3300027666 Ga0209282_1031252 Ga0209282_10312522 488
48 3300028794 Ga0307515_10000092 Ga0307515_1000009230 488
49 3300032002 Ga0307416_100000418 Ga0307416_10000041819 488
50 3300039062 Ga0400483_039738 Ga0400483_039738_11247_12719 488
51 3300042876 Ga0451577_0000723 Ga0451577_0000723_16969_18435 488
52 3300044712 Ga0453684_0000033 Ga0453684_0000033_420543_422009 488
53 3300044712 Ga0453684_0023237 Ga0453684_0023237_2115_3584 488
54 3300044712 Ga0453684_0031495 Ga0453684_0031495_4538_6010 488
55 3300044712 Ga0453684_0198382 Ga0453684_0198382_498_1964 488
56 3300045051 Ga0451576_0057983 Ga0451576_0057983_678_2147 488
57 3300028563 Ga0265319_1000024 Ga0265319_100002446 489
58 3300028577 Ga0265318_10004836 Ga0265318_100048366 489
59 3300031240 Ga0265320_10010602 Ga0265320_100106024 489
60 3300031251 Ga0265327_10016341 Ga0265327_100163413 489
61 3300031251 Ga0265327_10052192 Ga0265327_100521921 489
62 3300031711 Ga0265314_10009302 Ga0265314_100093023 489
63 3300038726 Ga0400490_14011 Ga0400490_14011_16749_18218 489
64 3300044712 Ga0453684_0000256 Ga0453684_0000256_54514_55983 489
65 3300044712 Ga0453684_0011365 Ga0453684_0011365_6684_8153 489
66 3300044712 Ga0453684_0042908 Ga0453684_0042908_4469_5938 489
67 3300045051 Ga0451576_0081517 Ga0451576_0081517_659_2188 489
68 3300005354 Ga0070675_100088818 Ga0070675_1000888182 490
69 3300025926 Ga0207659_10071362 Ga0207659_100713622 490
70 3300027876 Ga0209974_10013559 Ga0209974_100135592 490
71 3300032133 Ga0316583_10018916 Ga0316583_100189161 490
72 iso_pu_bacteria 2818991441 2819567997 490
73 3300047472 Ga0495686_0011879 Ga0495686_0011879_75_1610 491
74 iso_pu_bacteria 2513020052 2513235976 491
75 iso_pu_bacteria 2643221600 2644012977 491
76 iso_pu_bacteria 2643221667 2644372286 491
77 iso_pu_bacteria 2643221716 2644642706 491
78 iso_pu_bacteria 2643221725 2644684758 491
79 iso_pu_bacteria 2738541279 2738732590 491
80 iso_pu_bacteria 2738541285 2738765155 491
81 iso_pu_bacteria 2738543007 2739214170 491
82 iso_pu_bacteria 2802428842 2802653691 491
83 iso_pu_bacteria 2857613821 2857615045 491
84 iso_pu_bacteria 2857618242 2857618748 491
85 iso_pu_bacteria 2881359912 2881363192 491
86 iso_pu_bacteria 2903895155 2903896803 491
87 iso_pu_bacteria 2904419702 2904422894 491
88 iso_pu_bacteria 2904555929 2904557161 491
89 iso_pu_bacteria 2919191525 2919195219 491
90 iso_pu_bacteria 2929150217 2929153646 491
91 iso_pu_bacteria 2958458903 2958461201 491
92 iso_pu_bacteria 2965320100 2965320868 491
93 iso_pu_bacteria 2977268062 2977270311 491
94 iso_pu_bacteria 8054307821 8054309984 491
95 iso_pu_bacteria 8055419101 8055422024 491
96 iso_pu_bacteria 8055592153 8055593314 491
97 iso_pu_bacteria 2833640130 2833643291 492
98 3300036647 Ga0316582_0142613 Ga0316582_0142613_12_1493 493
99 iso_pu_bacteria 2919509842 2919511377 493
100 3300005338 Ga0068868_100003518 Ga0068868_1000035184 494
101 3300005344 Ga0070661_100035017 Ga0070661_1000350172 494
102 3300005367 Ga0070667_100032751 Ga0070667_1000327512 494
103 3300005841 Ga0068863_100101595 Ga0068863_1001015952 494
104 3300005843 Ga0068860_100008289 Ga0068860_1000082896 494
105 3300013297 Ga0157378_10016736 Ga0157378_100167366 494
106 3300013297 Ga0157378_10062994 Ga0157378_100629942 494
107 3300026088 Ga0207641_10070552 Ga0207641_100705522 494
108 iso_pu_bacteria 2881247448 2881249624 494
109 iso_pu_bacteria 2958512119 2958513268 494
110 3300005288 Ga0065714_10005214 Ga0065714_100052142 495
111 3300009036 Ga0105244_10000108 Ga0105244_1000010863 495
112 3300013100 Ga0157373_10000002 Ga0157373_10000002604 495
113 3300013102 Ga0157371_10026541 Ga0157371_100265412 495
114 3300013104 Ga0157370_10009086 Ga0157370_1000908611 495
115 3300013105 Ga0157369_10002103 Ga0157369_1000210310 495
116 3300015261 Ga0182006_1002549 Ga0182006_10025495 495
117 3300017792 Ga0163161_10000063 Ga0163161_1000006334 495
118 3300025728 Ga0207655_1000128 Ga0207655_100012891 495
119 3300027361 Ga0209489_118184 Ga0209489_1181843 495
120 3300031548 Ga0307408_100010555 Ga0307408_1000105553 495
121 3300031852 Ga0307410_10000191 Ga0307410_1000019111 495
122 3300031901 Ga0307406_10000143 Ga0307406_1000014315 495
123 3300031903 Ga0307407_10001412 Ga0307407_100014121 495
124 3300032004 Ga0307414_10000086 Ga0307414_1000008620 495
125 3300032004 Ga0307414_10045632 Ga0307414_100456322 495
126 3300041407 Ga0439447_007576 Ga0439447_007576_1368_2855 495
127 3300048919 Ga0496116_0000032 Ga0496116_0000032_59778_61265 495
128 3300048927 Ga0496124_0037003 Ga0496124_0037003_1834_3321 495
129 3300048928 Ga0496125_0000059 Ga0496125_0000059_57178_58665 495
130 3300049671 Ga0501238_000096 Ga0501238_000096_11750_13237 495
131 3300049679 Ga0501249_000037 Ga0501249_000037_5869_7356 495
132 3300049763 Ga0501266_000019 Ga0501266_000019_30793_32280 495
133 3300053096 Ga0500641_0000019 Ga0500641_0000019_65748_67235 495
134 3300053096 Ga0500641_0000511 Ga0500641_0000511_10514_12001 495
135 3300053134 Ga0500658_0000003 Ga0500658_0000003_263762_265249 495
136 iso_pu_bacteria 2889276214 2889277313 495
137 iso_pu_bacteria 2904595352 2904595976 495
138 3300046513 Ga0495616_0007745 Ga0495616_0007745_678_2168 496
139 3300046522 Ga0495643_0000357 Ga0495643_0000357_21266_22756 496
140 3300053090 Ga0500646_0006687 Ga0500646_0006687_689_2179 496
141 iso_pu_bacteria 2738541295 2738815954 496
142 iso_pu_bacteria 2936361878 2936366984 496
143 iso_pu_bacteria 2977254563 2977257098 496
144 iso_pu_bacteria 2990275345 2990277993 496
145 iso_pu_bacteria 3001892409 3001898257 496
146 3300031727 Ga0316576_10065856 Ga0316576_100658562 497
147 iso_pu_bacteria 2833640130 2833641913 497
148 iso_pu_bacteria 2996706504 2996707938 497
149 3300013104 Ga0157370_10000262 Ga0157370_1000026232 498
150 3300017792 Ga0163161_10006675 Ga0163161_100066752 498
151 3300017792 Ga0163161_10148688 Ga0163161_101486881 498
152 3300048918 Ga0496115_0014851 Ga0496115_0014851_479_1975 498
153 3300048928 Ga0496125_0000177 Ga0496125_0000177_60392_61888 498
154 3300048929 Ga0496126_0054840 Ga0496126_0054840_1296_2792 498
155 3300053096 Ga0500641_0000072 Ga0500641_0000072_2658_4154 498
156 3300031251 Ga0265327_10001111 Ga0265327_1000111111 499
157 3300042876 Ga0451577_0167379 Ga0451577_0167379_255_1760 499
158 3300044712 Ga0453684_0156122 Ga0453684_0156122_879_2384 499
159 iso_pu_bacteria 2739367857 2740004173 499
160 iso_pu_bacteria 2739367858 2740008990 499
161 iso_pu_bacteria 2919414237 2919415084 499
162 iso_pu_bacteria 8056440228 8056443870 499
163 3300031548 Ga0307408_100037836 Ga0307408_1000378364 500
164 3300032002 Ga0307416_100056964 Ga0307416_1000569643 500
165 3300048913 Ga0496110_0054029 Ga0496110_0054029_1408_2910 500
166 3300045051 Ga0451576_0184325 Ga0451576_0184325_604_2109 501
167 3300048925 Ga0496122_0021948 Ga0496122_0021948_1851_3359 501
168 3300031824 Ga0307413_10000439 Ga0307413_100004396 503
169 3300032005 Ga0307411_10000001 Ga0307411_10000001356 503
170 3300032004 Ga0307414_10096740 Ga0307414_100967401 506
171 3300035398 Ga0316574_0058471 Ga0316574_0058471_99_1622 507
172 3300032004 Ga0307414_10073863 Ga0307414_100738631 514
173 3300027471 Ga0209995_1002100 Ga0209995_10021001 518
174 3300027876 Ga0209974_10018062 Ga0209974_100180622 518
175 2162886007 SwRhRL2b_contig_1416553 SwRhRL2b_0057.00007220 536
176 3300005289 Ga0065704_10071351 Ga0065704_100713518 536
177 3300031731 Ga0307405_10000001 Ga0307405_100000011597 536

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

78

489

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5b87-assembly1.cif.gz_A crystal structure of a cysteine desulfurase from thermococcus onnurineus na1 in complex with alanine at 2.3 angstrom resolution 0.8971 77 500
6wci-assembly1.cif.gz_A crystal structure of a cysteine desulfurase sufs from stenotrophomonas maltophilia k279a 0.8967 54 498
1t3i-assembly1.cif.gz_B structure of slr0077/sufs, the essential cysteine desulfurase from synechocystis pcc 6803 0.8927 50 500
5xt6-assembly1.cif.gz_A a sulfur-transferring catalytic intermediate of sufs-sufu complex from bacillus subtilis 0.8908 54 500
7e6e-assembly1.cif.gz_A crystal structure of pmp-bound form of cysteine desulfurase sufs r376a from bacillus subtilis in d-cycloserine-inhibition 0.8899 54 505
ID Description Score Start End Superfamily
af_A0A0P0Y7R5_83_362_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9479 95 364 3.40.640.10
af_Q54GN1_387_538_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9322 365 499 3.90.1150.10
af_A0A0P0Y800_87_331_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9282 95 330 3.40.640.10
af_Q9AX15_354_528_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9261 344 497 3.90.1150.10
af_Q9N4F1_73_333_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9213 91 361 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A7C5NJ04-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9875 50 494 GO:0008483
AF-A0A520C4U4-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9868 93 480 GO:0008483
AF-A0A5C8MMP4-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9867 49 361 GO:0008483
AF-A0A2G6QSV5-F1-model_v4 Selenocysteine lyase 0.9865 49 446 GO:0016829
AF-A0A2N1VSM3-F1-model_v4 Selenocysteine lyase 0.9859 47 536 GO:0016829

Feature Viewer

pLDDT pTM Quality
87.08 0.85 High
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Predicted Structure (AlphaFold2)

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