F268720

General Info

Members Datasets Scaffolds Average Seq Length
176 121 352 425

Family's Representative Sequence

Representative Sequence 3300041407|Ga0439447_000787|Ga0439447_000787_8640_10202
Length 499
Sequence VVAAADALGYRAGKPARPAVAAAQATTGTHRDGSRAADPQSTICRADRLPAVHSRSDAMSAVQGASLSTGRVHSGEWRAVALSVAYFFCVLTAYYMIRPVRDQLSAVVGSTQLPWFYAATLLATLALTPVFSGLVSRYPRRVVVPVVYGFFIACLIGFVPLFGAHGPLSPRVLGTVFFVWISVFNLFVVSVFWSFMTDIWNEGQARRLFPIIAVGGTVGSLVGPALTGRLVGVIGVAPLLVVSASLLGLALVFVILLGQWSRVHGTRRFESSHEAAIGGGMFDGIKQVFANPFMRSMAILLLLGDWIGTVNYGLVVDYSKATFTDAVSRTRFAADLDLMTNIVALSAQVLLTPWLLSRRGAASVIGVWSVVTVMFLTLSASVADAHAPLTELFPAYGALIASLPAGMAVAMALVVSRGLAYGMVGPARESLFSSAARTLRYKGKNAVDTAAWRFGDVAVATTMVGLRSLGVGVAGVVGWNLARWVQRGGAAEPGEGARA

Samples

Sample ID Description Type Environment
1 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
4 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
5 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
6 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
34 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
51 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
52 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
53 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
54 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
55 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
56 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
59 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
60 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
61 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
62 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
63 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
64 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
65 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
66 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
67 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
68 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
69 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
70 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
71 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
72 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
73 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
74 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
75 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
76 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
77 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
78 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
79 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
80 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
81 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
82 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
83 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
84 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
85 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
101 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
102 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
103 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
104 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
105 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
106 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
107 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
108 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
109 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
110 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
111 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
115 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
116 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
117 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
118 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
119 2643221695 Lysobacter sp. Root494 Isolate Unclassified
120 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
121 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.73
Metatranscriptomes 0
Isolates 2.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.25
Nodule 0
Rhizoplane 3.41
Rhizosphere 85.8
Stem 0
Stem Tuber 0
Unclassified 0.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439447_000787 3300041407 Bacteria 11662
2 rootH2_10173451 3300003320 Bacteria 3001
3 Ga0055526_1000034 3300003771 Bacteria 136991
4 Ga0055537_1000256 3300003773 Bacteria 38830
5 Ga0055524_1000060 3300003775 Bacteria 136991
6 Ga0055534_1000021 3300003784 Bacteria 137167
7 Ga0055528_1000022 3300003790 Bacteria 137042
8 Ga0070680_100029848 3300005336 Bacteria 4378
9 Ga0070682_100001778 3300005337 Bacteria 12022
10 Ga0070689_100000002 3300005340 Bacteria 695141
11 Ga0070668_100070248 3300005347 Bacteria 2725
12 Ga0070669_100108711 3300005353 Bacteria 2102
13 Ga0070659_100060293 3300005366 Bacteria 2997
14 Ga0070700_100164055 3300005441 Bacteria 1532
15 Ga0070681_10063587 3300005458 Bacteria 3662
16 Ga0070679_100002877 3300005530 Bacteria 15649
17 Ga0068853_100026012 3300005539 Bacteria 4912
18 Ga0070693_100019293 3300005547 Bacteria 3572
19 Ga0070693_100031108 3300005547 Bacteria 2923
20 Ga0068855_100071670 3300005563 Bacteria 4028
21 Ga0068855_100083425 3300005563 Bacteria 3702
22 Ga0068856_100000836 3300005614 Bacteria 33208
23 Ga0068852_100011753 3300005616 Bacteria 6611
24 Ga0099794_10000089 3300007265 Bacteria 33900
25 Ga0105245_10158725 3300009098 Bacteria 2144
26 Ga0105241_10031747 3300009174 Bacteria 3955
27 Ga0105241_10071028 3300009174 Bacteria 2702
28 Ga0105237_10022801 3300009545 Bacteria 6424
29 Ga0105238_10106944 3300009551 Bacteria 2779
30 Ga0105249_10224233 3300009553 Unclassified 1851
31 Ga0105239_10003870 3300010375 Bacteria 18157
32 Ga0105239_10087410 3300010375 Bacteria 3436
33 Ga0105239_10362885 3300010375 Bacteria 1636
34 Ga0157370_10045314 3300013104 Bacteria 4220
35 Ga0157378_10000233 3300013297 Bacteria 54246
36 Ga0157372_10048435 3300013307 Bacteria 4725
37 Ga0157375_10143326 3300013308 Bacteria 2518
38 Ga0183360_10001 3300015689 Bacteria 3943671
39 Ga0209565_1000034 3300025263 Bacteria 312950
40 Ga0209565_1003497 3300025263 Bacteria 5053
41 Ga0209673_1000039 3300025273 Bacteria 312950
42 Ga0209675_1000023 3300025291 Bacteria 312950
43 Ga0209564_1000066 3300025295 Bacteria 312899
44 Ga0209256_1000048 3300025299 Bacteria 312899
45 Ga0207707_10008761 3300025912 Bacteria 8780
46 Ga0207707_10040635 3300025912 Bacteria 4062
47 Ga0207652_10097339 3300025921 Bacteria 2593
48 Ga0207681_10095932 3300025923 Bacteria 2128
49 Ga0207690_10057279 3300025932 Bacteria 2632
50 Ga0207690_10185929 3300025932 Bacteria 1568
51 Ga0207670_10000001 3300025936 Bacteria 949312
52 Ga0207691_10109039 3300025940 Bacteria 2463
53 Ga0207679_10214458 3300025945 Bacteria 1616
54 Ga0207667_10071823 3300025949 Bacteria 3598
55 Ga0207667_10077081 3300025949 Bacteria 3458
56 Ga0207639_10008476 3300026041 Bacteria 7047
57 Ga0207702_10002692 3300026078 Bacteria 16685
58 Ga0209588_1000010 3300027671 Bacteria 159025
59 Ga0314311_1020524 3300030733 Bacteria 15599
60 Ga0316182_1221356 3300030745 Bacteria 2401
61 Ga0316576_10087476 3300031727 Bacteria 2319
62 Ga0316578_10006985 3300031728 Bacteria 5617
63 Ga0316578_10051148 3300031728 Bacteria 2419
64 Ga0307516_10012756 3300031730 Bacteria 9032
65 Ga0316577_10024700 3300031733 Bacteria 3342
66 Ga0307413_10053125 3300031824 Bacteria 2451
67 Ga0307406_10000868 3300031901 Bacteria 17010
68 Ga0307412_10186946 3300031911 Bacteria 1563
69 Ga0307416_100307801 3300032002 Bacteria 1579
70 Ga0307414_10180086 3300032004 Bacteria 1699
71 Ga0307411_10142774 3300032005 Bacteria 1767
72 Ga0316580_10007141 3300032139 Bacteria 3319
73 Ga0307507_10065399 3300033179 Bacteria 3344
74 Ga0316574_0018760 3300035398 Bacteria 4071
75 Ga0316574_0019335 3300035398 Bacteria 4016
76 Ga0316574_0033588 3300035398 Bacteria 3123
77 Ga0316574_0115248 3300035398 Bacteria 1723
78 Ga0316584_0052397 3300036712 Bacteria 3052
79 Ga0316584_0056558 3300036712 Bacteria 2936
80 Ga0439448_0020110 3300042005 Bacteria 2063
81 Ga0439432_006116 3300042006 Bacteria 4310
82 Ga0450918_002957 3300042531 Bacteria 3189
83 Ga0451577_0001632 3300042876 Bacteria 29116
84 Ga0453684_0001307 3300044712 Bacteria 73699
85 Ga0453684_0014386 3300044712 Bacteria 12665
86 Ga0495580_0004535 3300046472 Bacteria 11661
87 Ga0495628_0063927 3300046516 Bacteria 2882
88 Ga0495667_0005656 3300046559 Bacteria 8455
89 Ga0495668_0006923 3300046616 Bacteria 7338
90 Ga0495636_0050354 3300047318 Bacteria 1743
91 Ga0496100_0196125 3300048903 Bacteria 1469
92 Ga0496103_0014322 3300048906 Bacteria 4710
93 Ga0496104_0218528 3300048907 Bacteria 1818
94 Ga0496109_0064975 3300048912 Bacteria 3340
95 Ga0496110_0071307 3300048913 Bacteria 3080
96 Ga0496111_0006018 3300048914 Bacteria 7839
97 Ga0496116_0065641 3300048919 Bacteria 2327
98 Ga0496118_0038775 3300048921 Bacteria 3813
99 Ga0496121_0006965 3300048924 Bacteria 13758
100 Ga0501031_0080636 3300049568 Bacteria 2121
101 Ga0501032_0051231 3300049569 Bacteria 2784
102 Ga0501032_0082561 3300049569 Bacteria 2138
103 Ga0501033_0002311 3300049570 Bacteria 16266
104 Ga0501033_0059821 3300049570 Bacteria 2813
105 Ga0501034_0017171 3300049571 Bacteria 7425
106 Ga0501034_0034324 3300049571 Bacteria 5142
107 Ga0501034_0036821 3300049571 Bacteria 4954
108 Ga0501036_0000234 3300049572 Bacteria 37172
109 Ga0501036_0016117 3300049572 Bacteria 6245
110 Ga0501036_0081342 3300049572 Bacteria 2737
111 Ga0501037_0000610 3300049573 Bacteria 27743
112 Ga0501038_0000466 3300049574 Bacteria 35500
113 Ga0501038_0002489 3300049574 Bacteria 17143
114 Ga0501038_0059120 3300049574 Bacteria 3284
115 Ga0501039_0001733 3300049575 Bacteria 16073
116 Ga0501039_0003985 3300049575 Bacteria 11103
117 Ga0501039_0033577 3300049575 Bacteria 3957
118 Ga0501039_0102795 3300049575 Bacteria 2230
119 Ga0501040_0000112 3300049576 Bacteria 42306
120 Ga0501040_0010692 3300049576 Bacteria 6002
121 Ga0501040_0040622 3300049576 Bacteria 3165
122 Ga0501041_0000346 3300049577 Bacteria 22826
123 Ga0501041_0017109 3300049577 Bacteria 4314
124 Ga0501041_0074694 3300049577 Bacteria 2083
125 Ga0501042_0000132 3300049578 Bacteria 32467
126 Ga0501042_0014668 3300049578 Bacteria 5352
127 Ga0501043_0032936 3300049579 Bacteria 4076
128 Ga0501043_0091784 3300049579 Bacteria 2388
129 Ga0501046_0005525 3300049580 Bacteria 11291
130 Ga0501047_0082117 3300049581 Bacteria 3098
131 Ga0501047_0106890 3300049581 Bacteria 2679
132 Ga0501048_0017824 3300049582 Bacteria 5225
133 Ga0501048_0033829 3300049582 Bacteria 3691
134 Ga0501068_0008013 3300049584 Bacteria 5860
135 Ga0501068_0102126 3300049584 Bacteria 1778
136 Ga0501071_0000101 3300049587 Bacteria 32969
137 Ga0501071_0012169 3300049587 Bacteria 5823
138 Ga0501071_0016615 3300049587 Bacteria 5063
139 Ga0501072_0000543 3300049588 Bacteria 27092
140 Ga0501073_0014260 3300049589 Bacteria 5771
141 Ga0501073_0061430 3300049589 Bacteria 2622
142 Ga0501074_0015729 3300049590 Bacteria 5501
143 Ga0501074_0027504 3300049590 Bacteria 4124
144 Ga0501075_0000084 3300049591 Bacteria 42780
145 Ga0501075_0004903 3300049591 Bacteria 9122
146 Ga0501076_0000487 3300049592 Bacteria 25025
147 Ga0501077_0000241 3300049593 Bacteria 32353
148 Ga0501077_0008109 3300049593 Bacteria 6494
149 Ga0501079_0000018 3300049741 Bacteria 64835
150 Ga0501080_0000356 3300049742 Bacteria 35261
151 Ga0501080_0014333 3300049742 Bacteria 7299
152 Ga0501080_0134410 3300049742 Bacteria 2289
153 Ga0501080_0157994 3300049742 Bacteria 2094
154 Ga0501081_0000017 3300049743 Bacteria 57378
155 Ga0501081_0005813 3300049743 Bacteria 7989
156 Ga0501081_0039592 3300049743 Bacteria 3226
157 Ga0501275_000104 3300049772 Bacteria 8838
158 Ga0501035_0000071 3300049822 Bacteria 126831
159 Ga0501035_0017946 3300049822 Bacteria 6524
160 Ga0501035_0046969 3300049822 Bacteria 3880
161 Ga0501035_0058169 3300049822 Bacteria 3446
162 Ga0501044_0004077 3300049823 Bacteria 16381
163 Ga0501044_0030718 3300049823 Bacteria 5660
164 Ga0501045_0000074 3300049824 Bacteria 47421
165 Ga0501084_0004203 3300054114 Bacteria 11743
166 Ga0501084_0004788 3300054114 Bacteria 11063
167 Ga0501084_0169453 3300054114 Bacteria 1843
168 Ga0501082_0000177 3300060353 Bacteria 55118
169 Ga0501082_0032989 3300060353 Bacteria 4465
170 Ga0501082_0133170 3300060353 Bacteria 2156
171 Ga0501082_0292651 3300060353 Bacteria 1418
172 Ga0530510_0000503 3300061734 Bacteria 24776
173 2572254684 2571042365 Bacteria 3289345
174 2644530408 2643221695 Bacteria 3441323
175 2941491740 2941489479 Bacteria 6313767
176 2995953039 2995948881 Bacteria 6358104
177 Ga0439447_000787
178 rootH2_10173451
179 Ga0055526_1000034
180 Ga0055537_1000256
181 Ga0055524_1000060
182 Ga0055534_1000021
183 Ga0055528_1000022
184 Ga0070680_100029848
185 Ga0070682_100001778
186 Ga0070689_100000002
187 Ga0070668_100070248
188 Ga0070669_100108711
189 Ga0070659_100060293
190 Ga0070700_100164055
191 Ga0070681_10063587
192 Ga0070679_100002877
193 Ga0068853_100026012
194 Ga0070693_100019293
195 Ga0070693_100031108
196 Ga0068855_100071670
197 Ga0068855_100083425
198 Ga0068856_100000836
199 Ga0068852_100011753
200 Ga0099794_10000089
201 Ga0105245_10158725
202 Ga0105241_10031747
203 Ga0105241_10071028
204 Ga0105237_10022801
205 Ga0105238_10106944
206 Ga0105249_10224233
207 Ga0105239_10003870
208 Ga0105239_10087410
209 Ga0105239_10362885
210 Ga0157370_10045314
211 Ga0157378_10000233
212 Ga0157372_10048435
213 Ga0157375_10143326
214 Ga0183360_10001
215 Ga0209565_1000034
216 Ga0209565_1003497
217 Ga0209673_1000039
218 Ga0209675_1000023
219 Ga0209564_1000066
220 Ga0209256_1000048
221 Ga0207707_10008761
222 Ga0207707_10040635
223 Ga0207652_10097339
224 Ga0207681_10095932
225 Ga0207690_10057279
226 Ga0207690_10185929
227 Ga0207670_10000001
228 Ga0207691_10109039
229 Ga0207679_10214458
230 Ga0207667_10071823
231 Ga0207667_10077081
232 Ga0207639_10008476
233 Ga0207702_10002692
234 Ga0209588_1000010
235 Ga0314311_1020524
236 Ga0316182_1221356
237 Ga0316576_10087476
238 Ga0316578_10006985
239 Ga0316578_10051148
240 Ga0307516_10012756
241 Ga0316577_10024700
242 Ga0307413_10053125
243 Ga0307406_10000868
244 Ga0307412_10186946
245 Ga0307416_100307801
246 Ga0307414_10180086
247 Ga0307411_10142774
248 Ga0316580_10007141
249 Ga0307507_10065399
250 Ga0316574_0018760
251 Ga0316574_0019335
252 Ga0316574_0033588
253 Ga0316574_0115248
254 Ga0316584_0052397
255 Ga0316584_0056558
256 Ga0439448_0020110
257 Ga0439432_006116
258 Ga0450918_002957
259 Ga0451577_0001632
260 Ga0453684_0001307
261 Ga0453684_0014386
262 Ga0495580_0004535
263 Ga0495628_0063927
264 Ga0495667_0005656
265 Ga0495668_0006923
266 Ga0495636_0050354
267 Ga0496100_0196125
268 Ga0496103_0014322
269 Ga0496104_0218528
270 Ga0496109_0064975
271 Ga0496110_0071307
272 Ga0496111_0006018
273 Ga0496116_0065641
274 Ga0496118_0038775
275 Ga0496121_0006965
276 Ga0501031_0080636
277 Ga0501032_0051231
278 Ga0501032_0082561
279 Ga0501033_0002311
280 Ga0501033_0059821
281 Ga0501034_0017171
282 Ga0501034_0034324
283 Ga0501034_0036821
284 Ga0501036_0000234
285 Ga0501036_0016117
286 Ga0501036_0081342
287 Ga0501037_0000610
288 Ga0501038_0000466
289 Ga0501038_0002489
290 Ga0501038_0059120
291 Ga0501039_0001733
292 Ga0501039_0003985
293 Ga0501039_0033577
294 Ga0501039_0102795
295 Ga0501040_0000112
296 Ga0501040_0010692
297 Ga0501040_0040622
298 Ga0501041_0000346
299 Ga0501041_0017109
300 Ga0501041_0074694
301 Ga0501042_0000132
302 Ga0501042_0014668
303 Ga0501043_0032936
304 Ga0501043_0091784
305 Ga0501046_0005525
306 Ga0501047_0082117
307 Ga0501047_0106890
308 Ga0501048_0017824
309 Ga0501048_0033829
310 Ga0501068_0008013
311 Ga0501068_0102126
312 Ga0501071_0000101
313 Ga0501071_0012169
314 Ga0501071_0016615
315 Ga0501072_0000543
316 Ga0501073_0014260
317 Ga0501073_0061430
318 Ga0501074_0015729
319 Ga0501074_0027504
320 Ga0501075_0000084
321 Ga0501075_0004903
322 Ga0501076_0000487
323 Ga0501077_0000241
324 Ga0501077_0008109
325 Ga0501079_0000018
326 Ga0501080_0000356
327 Ga0501080_0014333
328 Ga0501080_0134410
329 Ga0501080_0157994
330 Ga0501081_0000017
331 Ga0501081_0005813
332 Ga0501081_0039592
333 Ga0501275_000104
334 Ga0501035_0000071
335 Ga0501035_0017946
336 Ga0501035_0046969
337 Ga0501035_0058169
338 Ga0501044_0004077
339 Ga0501044_0030718
340 Ga0501045_0000074
341 Ga0501084_0004203
342 Ga0501084_0004788
343 Ga0501084_0169453
344 Ga0501082_0000177
345 Ga0501082_0032989
346 Ga0501082_0133170
347 Ga0501082_0292651
348 Ga0530510_0000503
349 2572254684
350 2644530408
351 2941491740
352 2995953039

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
8t6b-assembly1.cif.gz_A human vmat2 in complex with serotonin 0.7097 23 425
8jta-assembly1.cif.gz_A human vmat2 complex with tetrabenazine 0.6814 23 427
6kki-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward-occluded conformation 0.6789 25 428
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.6769 19 435
8t6b-assembly1.cif.gz_A human vmat2 in complex with serotonin 0.6547 23 425
ID Description Score Start End Superfamily
af_Q2G1R0_3_202_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8112 22 200 1.20.1250.20
af_Q8IIV4_234_415_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7725 23 203 1.20.1250.20
af_A0A4V0IJT1_312_502_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7704 21 203 1.20.1250.20
af_Q54XU7_308_497_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7606 19 197 1.20.1250.20
af_Q8IIV4_234_415_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7472 23 203 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A7T7XCR2-F1-model_v4 deleted 0.9353 18 427
AF-A0A534AAD1-F1-model_v4 MFS transporter 0.9255 1 431 GO:0016020
GO:0022857
AF-A0A2E7EKI4-F1-model_v4 MFS transporter 0.9182 1 429 GO:0016020
GO:0022857
AF-A0A3A5J661-F1-model_v4 MFS transporter 0.9082 4 431 GO:0016020
GO:0022857
AF-A0A1I0KSB0-F1-model_v4 ATP:ADP antiporter, AAA family 0.9069 14 431 GO:0016020

Map