F268509

General Info

Members Datasets Scaffolds Average Seq Length
176 112 166 299

Family's Representative Sequence

Representative Sequence 3300028666|Ga0265336_10000008|Ga0265336_1000000842
Length 335
Sequence MSLQEQTRVGAKSPAAPAEAPADPHAPDAALDLPAIVSQLRQARERWRVGQGRPRETSGRELPAREALAGILAGLRGALFPMRLGPPDLRQENEDYFVGHTLDTVLHALLGQVRLELTHQARARGEPGHRIDEQALQVVRDFGAALPAIRELLDTDVLAAYRGDPAARSVDEVLLCYPGLHAVIHHRIAHRLHELGVPLLARIVAELAHGDTGIDIHPGARIGSHFFIDHGTGVVIGETAVIGRNVRIYQAVTLGARRFETDGDGQLKKGGARHPIVEDDVVIYAGATVLGRVTIGRGASIGGNVWLTHSVPAGSRIAQANALDDRVVDAAGVGG

Samples

Sample ID Description Type Environment
1 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
2 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
3 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
4 2643221665 Acinetobacter sp. Root1280 Isolate Unclassified
5 2738541337 Pelomonas sp. BT06 Isolate Unclassified
6 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
7 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
8 2928515477 Acinetobacter bereziniae 1375 Isolate Rhizosphere
9 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
10 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
11 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
15 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
16 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
17 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
18 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
19 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
20 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
21 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
25 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
33 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
38 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
49 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
50 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
51 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
52 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
53 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
54 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
55 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
56 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
57 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
58 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
59 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
60 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
61 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
62 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
63 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
64 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
65 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
66 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
67 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
68 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
69 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
70 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
73 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
74 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
75 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
76 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
77 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
78 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
79 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
80 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
81 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
82 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
83 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
84 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
85 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
100 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
103 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
104 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
107 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
108 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
109 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
110 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
111 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
112 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.75
Metatranscriptomes 0
Isolates 6.25

Biome Distribution

Category Percentage (%)
Aerial Root 1.7
Bulb 0
Endosphere 10.8
Nodule 0.57
Rhizoplane 6.82
Rhizosphere 73.86
Stem 0
Stem Tuber 0
Unclassified 6.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10011258 3300003316 Bacteria 2584
2 rootH1_10011258 3300003323 Bacteria 1192
3 rootH1_10168014 3300003323 Bacteria 2793
4 Ga0055538_1000433 3300003751 Bacteria 16143
5 Ga0055539_1000412 3300003752 Bacteria 16143
6 Ga0055533_1000429 3300003756 Bacteria 16143
7 Ga0055525_1000577 3300003759 Bacteria 16143
8 Ga0055540_1008001 3300003792 Bacteria 3876
9 Ga0055541_1000307 3300003841 Bacteria 16143
10 Ga0070682_100120541 3300005337 Bacteria 1760
11 Ga0070660_100148489 3300005339 Bacteria 1884
12 Ga0068853_100042324 3300005539 Bacteria 3894
13 Ga0075366_10013228 3300006195 Bacteria 4695
14 Ga0105251_10018212 3300009011 Bacteria 3740
15 Ga0105244_10097338 3300009036 Bacteria 1442
16 Ga0105240_10209216 3300009093 Bacteria 2281
17 Ga0105240_10417236 3300009093 Bacteria 1509
18 Ga0111539_10007393 3300009094 Bacteria 14069
19 Ga0111539_10016907 3300009094 Bacteria 9030
20 Ga0105242_10115811 3300009176 Bacteria 2292
21 Ga0105237_10053718 3300009545 Bacteria 4040
22 Ga0105237_10143978 3300009545 Bacteria 2378
23 Ga0105246_10099920 3300011119 Bacteria 2110
24 Ga0157371_10035301 3300013102 Bacteria 3583
25 Ga0213872_10041403 3300021361 Bacteria 2102
26 Ga0209784_100002 3300025224 Bacteria 1753105
27 Ga0209566_100003 3300025225 Bacteria 1753105
28 Ga0209674_100004 3300025226 Bacteria 1753105
29 Ga0209563_100006 3300025230 Bacteria 1753105
30 Ga0207427_100590 3300025231 Bacteria 18213
31 Ga0209677_100003 3300025253 Bacteria 1753105
32 Ga0209051_1006271 3300025303 Bacteria 6740
33 Ga0207655_1001812 3300025728 Bacteria 18460
34 Ga0207655_1002098 3300025728 Bacteria 16710
35 Ga0207713_1098787 3300025735 Bacteria 1011
36 Ga0207695_10022322 3300025913 Bacteria 7190
37 Ga0207695_10131035 3300025913 Bacteria 2465
38 Ga0207695_10289191 3300025913 Bacteria 1531
39 Ga0207671_10003212 3300025914 Bacteria 16448
40 Ga0207671_10104205 3300025914 Bacteria 2152
41 Ga0207651_10000937 3300025960 Bacteria 12855
42 Ga0207702_10369043 3300026078 Bacteria 1377
43 Ga0207675_100011456 3300026118 Bacteria 8293
44 Ga0207428_10078832 3300027907 Bacteria 2576
45 Ga0265336_10000008 3300028666 Bacteria 336082
46 Ga0265324_10000579 3300029957 Bacteria 24973
47 Ga0307511_10000055 3300030521 Bacteria 93861
48 Ga0265330_10099610 3300031235 Bacteria 1244
49 Ga0265328_10001972 3300031239 Bacteria 9328
50 Ga0265325_10057101 3300031241 Bacteria 1991
51 Ga0265327_10005251 3300031251 Bacteria 10914
52 Ga0307509_10340652 3300031507 Bacteria 1227
53 Ga0307408_100000046 3300031548 Bacteria 167686
54 Ga0265314_10098603 3300031711 Bacteria 1884
55 Ga0307516_10000136 3300031730 Bacteria 87938
56 Ga0373939_0000070 3300035114 Bacteria 32328
57 Ga0395900_0070182 3300037418 Bacteria 3602
58 Ga0436361_0046537 3300039447 Bacteria 3962
59 Ga0436361_0597622 3300039447 Bacteria 2670
60 Ga0466965_0108151 3300044683 Bacteria 1427
61 Ga0466966_0008672 3300044684 Bacteria 6729
62 Ga0466966_0018964 3300044684 Bacteria 4533
63 Ga0466961_0050071 3300044693 Bacteria 2668
64 Ga0466964_0004191 3300044706 Bacteria 5305
65 Ga0453684_0536936 3300044712 Bacteria 1290
66 Ga0466971_0016478 3300044719 Bacteria 3262
67 Ga0466971_0048141 3300044719 Bacteria 1917
68 Ga0466970_0008244 3300044765 Bacteria 5235
69 Ga0466959_0146270 3300045049 Bacteria 1667
70 Ga0451576_0260384 3300045051 Bacteria 1813
71 Ga0466967_0039793 3300045976 Bacteria 4044
72 Ga0495650_0012786 3300046471 Bacteria 4492
73 Ga0495650_0058038 3300046471 Bacteria 1564
74 Ga0495639_0013288 3300046475 Bacteria 3554
75 Ga0495648_0073798 3300046524 Bacteria 1968
76 Ga0495668_0028039 3300046616 Bacteria 3187
77 Ga0495625_0003979 3300046660 Bacteria 14171
78 Ga0495677_0006689 3300047445 Bacteria 4340
79 Ga0496100_0065474 3300048903 Bacteria 2408
80 Ga0496104_0135916 3300048907 Bacteria 2362
81 Ga0496108_0048109 3300048911 Bacteria 3565
82 Ga0496108_0240472 3300048911 Bacteria 1575
83 Ga0496109_0452933 3300048912 Bacteria 1212
84 Ga0496110_0223091 3300048913 Bacteria 1714
85 Ga0496114_0001442 3300048917 Bacteria 18043
86 Ga0496114_0002651 3300048917 Bacteria 13648
87 Ga0496114_0140791 3300048917 Bacteria 2088
88 Ga0496114_0294399 3300048917 Bacteria 1432
89 Ga0496115_0157089 3300048918 Bacteria 1879
90 Ga0496115_0172078 3300048918 Bacteria 1791
91 Ga0501031_0006791 3300049568 Bacteria 7465
92 Ga0501031_0009440 3300049568 Bacteria 6341
93 Ga0501031_0011752 3300049568 Bacteria 5711
94 Ga0501031_0028507 3300049568 Bacteria 3640
95 Ga0501031_0030282 3300049568 Bacteria 3530
96 Ga0501031_0030930 3300049568 Bacteria 3493
97 Ga0501032_0001038 3300049569 Bacteria 22303
98 Ga0501032_0001256 3300049569 Bacteria 20363
99 Ga0501032_0006131 3300049569 Bacteria 8855
100 Ga0501032_0063036 3300049569 Bacteria 2482
101 Ga0501032_0141071 3300049569 Bacteria 1586
102 Ga0501032_0201750 3300049569 Bacteria 1298
103 Ga0501033_0000403 3300049570 Bacteria 41486
104 Ga0501033_0001610 3300049570 Bacteria 19837
105 Ga0501033_0003841 3300049570 Bacteria 12212
106 Ga0501033_0009063 3300049570 Bacteria 7677
107 Ga0501034_0008207 3300049571 Bacteria 11064
108 Ga0501034_0337535 3300049571 Bacteria 1437
109 Ga0501034_0397163 3300049571 Bacteria 1302
110 Ga0501036_0000764 3300049572 Bacteria 23858
111 Ga0501036_0018629 3300049572 Bacteria 5820
112 Ga0501036_0243355 3300049572 Bacteria 1508
113 Ga0501037_0002333 3300049573 Bacteria 13707
114 Ga0501037_0040016 3300049573 Bacteria 3450
115 Ga0501037_0191466 3300049573 Bacteria 1448
116 Ga0501037_0354241 3300049573 Bacteria 1012
117 Ga0501038_0003064 3300049574 Bacteria 15576
118 Ga0501038_0004315 3300049574 Bacteria 13218
119 Ga0501038_0007027 3300049574 Bacteria 10398
120 Ga0501038_0007681 3300049574 Bacteria 9943
121 Ga0501038_0018498 3300049574 Bacteria 6291
122 Ga0501038_0052329 3300049574 Bacteria 3520
123 Ga0501038_0064711 3300049574 Bacteria 3118
124 Ga0501038_0131723 3300049574 Bacteria 2052
125 Ga0501039_0004609 3300049575 Bacteria 10423
126 Ga0501039_0056305 3300049575 Bacteria 3045
127 Ga0501039_0183835 3300049575 Bacteria 1644
128 Ga0501040_0024821 3300049576 Bacteria 4026
129 Ga0501040_0288850 3300049576 Bacteria 1172
130 Ga0501042_0003284 3300049578 Bacteria 10121
131 Ga0501042_0092872 3300049578 Bacteria 2167
132 Ga0501043_0005319 3300049579 Bacteria 10404
133 Ga0501043_0006282 3300049579 Bacteria 9537
134 Ga0501043_0035508 3300049579 Bacteria 3921
135 Ga0501043_0080136 3300049579 Bacteria 2565
136 Ga0501043_0149991 3300049579 Bacteria 1824
137 Ga0501046_0000889 3300049580 Bacteria 29096
138 Ga0501046_0015490 3300049580 Bacteria 6404
139 Ga0501046_0050465 3300049580 Bacteria 3287
140 Ga0501046_0098439 3300049580 Bacteria 2246
141 Ga0501047_0002434 3300049581 Bacteria 17788
142 Ga0501047_0225061 3300049581 Bacteria 1731
143 Ga0501048_0005502 3300049582 Bacteria 9636
144 Ga0501068_0011869 3300049584 Bacteria 4925
145 Ga0501071_0238628 3300049587 Bacteria 1370
146 Ga0501072_0412494 3300049588 Bacteria 1071
147 Ga0501075_0025084 3300049591 Bacteria 4378
148 Ga0501080_0145730 3300049742 Bacteria 2189
149 Ga0501035_0000158 3300049822 Bacteria 82890
150 Ga0501035_0003883 3300049822 Bacteria 14259
151 Ga0501035_0006972 3300049822 Bacteria 10552
152 Ga0501044_0000190 3300049823 Bacteria 77415
153 Ga0501044_0006207 3300049823 Bacteria 13208
154 Ga0501044_0061053 3300049823 Bacteria 3857
155 Ga0501044_0135252 3300049823 Bacteria 2456
156 Ga0501044_0164704 3300049823 Bacteria 2192
157 Ga0501044_0432717 3300049823 Bacteria 1224
158 Ga0501045_0001759 3300049824 Bacteria 14603
159 Ga0501045_0314043 3300049824 Bacteria 1166
160 nmdc:mga0yw44_94345_c1 3300050492 Bacteria 1319
161 nmdc:mga0k408_2462_c1 3300050493 Bacteria 9842
162 nmdc:mga08y16_14138_c1 3300050511 Bacteria 8400
163 nmdc:mga08y16_6325_c1 3300050511 Bacteria 12421
164 Ga0500643_001159 3300053087 Bacteria 15711
165 Ga0500618_001960 3300053125 Bacteria 8419
166 Ga0500636_0110403 3300053177 Bacteria 1555

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10417236 Ga0105240_104172362 239
2 3300025913 Ga0207695_10289191 Ga0207695_102891912 239
3 3300048917 Ga0496114_0294399 Ga0496114_0294399_48_842 242
4 3300045976 Ga0466967_0039793 Ga0466967_0039793_2212_3039 244
5 3300026078 Ga0207702_10369043 Ga0207702_103690432 250
6 3300049576 Ga0501040_0288850 Ga0501040_0288850_288_1133 250
7 3300009036 Ga0105244_10097338 Ga0105244_100973382 252
8 3300013102 Ga0157371_10035301 Ga0157371_100353014 252
9 3300025728 Ga0207655_1001812 Ga0207655_100181212 252
10 3300025728 Ga0207655_1002098 Ga0207655_100209811 252
11 3300050492 nmdc:mga0yw44_94345_c1 nmdc:mga0yw44_94345_c1_475_1308 255
12 3300009545 Ga0105237_10053718 Ga0105237_100537183 259
13 3300025914 Ga0207671_10003212 Ga0207671_100032123 259
14 3300030521 Ga0307511_10000055 Ga0307511_1000005576 259
15 3300046471 Ga0495650_0012786 Ga0495650_0012786_3484_4416 259
16 3300031548 Ga0307408_100000046 Ga0307408_10000004632 263
17 3300049568 Ga0501031_0009440 Ga0501031_0009440_72_932 264
18 3300049568 Ga0501031_0011752 Ga0501031_0011752_3153_4013 264
19 3300049569 Ga0501032_0001256 Ga0501032_0001256_6914_7774 264
20 3300049569 Ga0501032_0006131 Ga0501032_0006131_3348_4208 264
21 3300049569 Ga0501032_0141071 Ga0501032_0141071_376_1236 264
22 3300049570 Ga0501033_0003841 Ga0501033_0003841_6184_7044 264
23 3300049570 Ga0501033_0009063 Ga0501033_0009063_3229_4089 264
24 3300049571 Ga0501034_0008207 Ga0501034_0008207_4177_5037 264
25 3300049572 Ga0501036_0018629 Ga0501036_0018629_864_1724 264
26 3300049572 Ga0501036_0243355 Ga0501036_0243355_380_1240 264
27 3300049573 Ga0501037_0002333 Ga0501037_0002333_3386_4246 264
28 3300049573 Ga0501037_0191466 Ga0501037_0191466_388_1248 264
29 3300049573 Ga0501037_0354241 Ga0501037_0354241_18_878 264
30 3300049574 Ga0501038_0003064 Ga0501038_0003064_10539_11399 264
31 3300049574 Ga0501038_0004315 Ga0501038_0004315_481_1341 264
32 3300049574 Ga0501038_0064711 Ga0501038_0064711_377_1237 264
33 3300049575 Ga0501039_0004609 Ga0501039_0004609_7231_8091 264
34 3300049575 Ga0501039_0056305 Ga0501039_0056305_906_1766 264
35 3300049576 Ga0501040_0024821 Ga0501040_0024821_521_1381 264
36 3300049578 Ga0501042_0003284 Ga0501042_0003284_1848_2708 264
37 3300049579 Ga0501043_0006282 Ga0501043_0006282_316_1176 264
38 3300049579 Ga0501043_0149991 Ga0501043_0149991_82_942 264
39 3300049580 Ga0501046_0000889 Ga0501046_0000889_12066_12926 264
40 3300049580 Ga0501046_0050465 Ga0501046_0050465_953_1813 264
41 3300049581 Ga0501047_0002434 Ga0501047_0002434_5410_6270 264
42 3300049582 Ga0501048_0005502 Ga0501048_0005502_3759_4619 264
43 3300049584 Ga0501068_0011869 Ga0501068_0011869_1951_2811 264
44 3300049588 Ga0501072_0412494 Ga0501072_0412494_138_998 264
45 3300049742 Ga0501080_0145730 Ga0501080_0145730_96_956 264
46 3300049822 Ga0501035_0000158 Ga0501035_0000158_33217_34077 264
47 3300049822 Ga0501035_0006972 Ga0501035_0006972_6881_7741 264
48 3300049824 Ga0501045_0001759 Ga0501045_0001759_7896_8756 264
49 3300049824 Ga0501045_0314043 Ga0501045_0314043_171_1031 264
50 3300009011 Ga0105251_10018212 Ga0105251_100182123 266
51 3300025735 Ga0207713_1098787 Ga0207713_10987871 266
52 3300009094 Ga0111539_10007393 Ga0111539_100073938 272
53 3300027907 Ga0207428_10078832 Ga0207428_100788322 272
54 3300050511 nmdc:mga08y16_14138_c1 nmdc:mga08y16_14138_c1_3510_4394 272
55 3300045051 Ga0451576_0260384 Ga0451576_0260384_67_996 274
56 iso_pu_bacteria 2928515477 2928516211 274
57 3300035114 Ga0373939_0000070 Ga0373939_0000070_7678_8613 275
58 3300031711 Ga0265314_10098603 Ga0265314_100986032 278
59 iso_pu_bacteria 2643221646 2644256750 279
60 3300031239 Ga0265328_10001972 Ga0265328_100019723 280
61 3300048917 Ga0496114_0140791 Ga0496114_0140791_262_1170 280
62 3300049568 Ga0501031_0006791 Ga0501031_0006791_2503_3426 280
63 iso_pu_bacteria 2738541337 2739058269 281
64 3300006195 Ga0075366_10013228 Ga0075366_100132283 282
65 3300050493 nmdc:mga0k408_2462_c1 nmdc:mga0k408_2462_c1_8865_9785 282
66 iso_pu_bacteria 2643221544 2643745387 282
67 3300005339 Ga0070660_100148489 Ga0070660_1001484892 283
68 3300048917 Ga0496114_0002651 Ga0496114_0002651_8918_9844 283
69 3300048918 Ga0496115_0172078 Ga0496115_0172078_657_1583 283
70 3300049569 Ga0501032_0201750 Ga0501032_0201750_162_1079 283
71 3300049823 Ga0501044_0432717 Ga0501044_0432717_200_1117 283
72 3300049591 Ga0501075_0025084 Ga0501075_0025084_1197_2120 284
73 3300009094 Ga0111539_10016907 Ga0111539_100169072 285
74 3300011119 Ga0105246_10099920 Ga0105246_100999202 285
75 3300048911 Ga0496108_0048109 Ga0496108_0048109_1478_2401 285
76 3300048912 Ga0496109_0452933 Ga0496109_0452933_217_1140 285
77 3300048913 Ga0496110_0223091 Ga0496110_0223091_684_1607 285
78 3300049570 Ga0501033_0001610 Ga0501033_0001610_14330_15253 285
79 3300049571 Ga0501034_0397163 Ga0501034_0397163_231_1154 285
80 3300049572 Ga0501036_0000764 Ga0501036_0000764_18100_19023 285
81 3300049573 Ga0501037_0040016 Ga0501037_0040016_317_1240 285
82 3300049574 Ga0501038_0007027 Ga0501038_0007027_6556_7479 285
83 3300049578 Ga0501042_0092872 Ga0501042_0092872_587_1513 285
84 3300049579 Ga0501043_0005319 Ga0501043_0005319_5153_6076 285
85 3300049579 Ga0501043_0035508 Ga0501043_0035508_2936_3859 285
86 3300049587 Ga0501071_0238628 Ga0501071_0238628_209_1135 285
87 3300049822 Ga0501035_0003883 Ga0501035_0003883_4492_5415 285
88 3300049823 Ga0501044_0000190 Ga0501044_0000190_48306_49229 285
89 3300050511 nmdc:mga08y16_6325_c1 nmdc:mga08y16_6325_c1_1130_2053 285
90 3300053125 Ga0500618_001960 Ga0500618_001960_7132_8058 285
91 3300053177 Ga0500636_0110403 Ga0500636_0110403_172_1098 285
92 iso_pu_bacteria 2839094727 2839096761 285
93 3300003323 rootH1_10168014 rootH1_101680142 286
94 3300009545 Ga0105237_10143978 Ga0105237_101439782 286
95 3300025913 Ga0207695_10022322 Ga0207695_100223222 286
96 3300025914 Ga0207671_10104205 Ga0207671_101042052 286
97 3300049579 Ga0501043_0080136 Ga0501043_0080136_221_1162 286
98 3300049580 Ga0501046_0015490 Ga0501046_0015490_3166_4107 286
99 3300049823 Ga0501044_0061053 Ga0501044_0061053_1118_2059 286
100 3300005539 Ga0068853_100042324 Ga0068853_1000423242 288
101 3300031507 Ga0307509_10340652 Ga0307509_103406521 288
102 3300049570 Ga0501033_0000403 Ga0501033_0000403_36859_37908 288
103 3300049574 Ga0501038_0131723 Ga0501038_0131723_955_2004 288
104 3300049581 Ga0501047_0225061 Ga0501047_0225061_199_1248 288
105 3300049823 Ga0501044_0006207 Ga0501044_0006207_11178_12227 288
106 3300049823 Ga0501044_0135252 Ga0501044_0135252_286_1221 288
107 iso_pu_bacteria 2643221665 2644361058 288
108 3300039447 Ga0436361_0046537 Ga0436361_0046537_2817_3770 289
109 iso_pu_bacteria 2928027323 2928028666 289
110 iso_pu_bacteria 2984555340 2984555534 289
111 iso_pu_bacteria 2984564862 2984566353 289
112 iso_pu_bacteria 2993356040 2993357368 289
113 3300003751 Ga0055538_1000433 Ga0055538_10004338 290
114 3300003752 Ga0055539_1000412 Ga0055539_10004128 290
115 3300003756 Ga0055533_1000429 Ga0055533_10004298 290
116 3300003759 Ga0055525_1000577 Ga0055525_10005778 290
117 3300003841 Ga0055541_1000307 Ga0055541_10003078 290
118 3300009093 Ga0105240_10209216 Ga0105240_102092161 290
119 3300021361 Ga0213872_10041403 Ga0213872_100414032 290
120 3300025224 Ga0209784_100002 Ga0209784_1000021352 290
121 3300025225 Ga0209566_100003 Ga0209566_1000031352 290
122 3300025226 Ga0209674_100004 Ga0209674_1000041352 290
123 3300025230 Ga0209563_100006 Ga0209563_1000061352 290
124 3300025253 Ga0209677_100003 Ga0209677_1000031352 290
125 3300031235 Ga0265330_10099610 Ga0265330_100996102 290
126 3300031241 Ga0265325_10057101 Ga0265325_100571011 290
127 3300037418 Ga0395900_0070182 Ga0395900_0070182_2378_3328 290
128 3300039447 Ga0436361_0597622 Ga0436361_0597622_704_1651 290
129 3300046524 Ga0495648_0073798 Ga0495648_0073798_22_990 290
130 3300046616 Ga0495668_0028039 Ga0495668_0028039_1453_2421 290
131 3300046660 Ga0495625_0003979 Ga0495625_0003979_7204_8172 290
132 3300047445 Ga0495677_0006689 Ga0495677_0006689_2469_3437 290
133 3300053087 Ga0500643_001159 Ga0500643_001159_2777_3745 290
134 iso_pu_bacteria 2526164512 2526210778 290
135 3300049568 Ga0501031_0030930 Ga0501031_0030930_1029_1979 291
136 3300049569 Ga0501032_0001038 Ga0501032_0001038_15785_16735 291
137 3300049575 Ga0501039_0183835 Ga0501039_0183835_225_1175 291
138 3300025231 Ga0207427_100590 Ga0207427_10059017 292
139 3300025913 Ga0207695_10131035 Ga0207695_101310352 292
140 3300026118 Ga0207675_100011456 Ga0207675_1000114563 292
141 3300031251 Ga0265327_10005251 Ga0265327_100052513 292
142 3300044712 Ga0453684_0536936 Ga0453684_0536936_293_1246 292
143 3300005337 Ga0070682_100120541 Ga0070682_1001205411 293
144 3300048903 Ga0496100_0065474 Ga0496100_0065474_313_1266 293
145 3300048907 Ga0496104_0135916 Ga0496104_0135916_735_1688 293
146 3300048911 Ga0496108_0240472 Ga0496108_0240472_297_1247 293
147 3300048917 Ga0496114_0001442 Ga0496114_0001442_13386_14339 293
148 3300048918 Ga0496115_0157089 Ga0496115_0157089_871_1824 293
149 3300049568 Ga0501031_0030282 Ga0501031_0030282_287_1237 293
150 3300049569 Ga0501032_0063036 Ga0501032_0063036_1113_2063 293
151 3300049571 Ga0501034_0337535 Ga0501034_0337535_139_1089 293
152 3300049574 Ga0501038_0007681 Ga0501038_0007681_8085_9035 293
153 3300049574 Ga0501038_0018498 Ga0501038_0018498_1013_1963 293
154 3300049574 Ga0501038_0052329 Ga0501038_0052329_24_986 293
155 3300049580 Ga0501046_0098439 Ga0501046_0098439_525_1475 293
156 3300049823 Ga0501044_0164704 Ga0501044_0164704_107_1057 293
157 3300003792 Ga0055540_1008001 Ga0055540_10080012 295
158 3300009176 Ga0105242_10115811 Ga0105242_101158112 295
159 3300025303 Ga0209051_1006271 Ga0209051_10062712 295
160 3300049568 Ga0501031_0028507 Ga0501031_0028507_493_1479 295
161 3300044683 Ga0466965_0108151 Ga0466965_0108151_379_1380 298
162 3300044684 Ga0466966_0008672 Ga0466966_0008672_2221_3222 298
163 3300044719 Ga0466971_0048141 Ga0466971_0048141_730_1731 298
164 3300046471 Ga0495650_0058038 Ga0495650_0058038_511_1479 298
165 3300025960 Ga0207651_10000937 Ga0207651_100009375 299
166 3300031730 Ga0307516_10000136 Ga0307516_1000013650 300
167 3300044684 Ga0466966_0018964 Ga0466966_0018964_3437_4426 300
168 3300044693 Ga0466961_0050071 Ga0466961_0050071_161_1150 300
169 3300044706 Ga0466964_0004191 Ga0466964_0004191_4048_5037 300
170 3300044719 Ga0466971_0016478 Ga0466971_0016478_355_1344 300
171 3300044765 Ga0466970_0008244 Ga0466970_0008244_567_1556 300
172 3300045049 Ga0466959_0146270 Ga0466959_0146270_341_1330 300
173 3300046475 Ga0495639_0013288 Ga0495639_0013288_518_1492 300
174 3300028666 Ga0265336_10000008 Ga0265336_1000000842 305
175 3300029957 Ga0265324_10000579 Ga0265324_100005794 305
176 3300003316 rootH1_10011258 rootH1_100112583 307

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00132

Hexapep

Bacterial transferase hexapeptide (six repeats)

274

309

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bw9-assembly1.cif.gz_B crystal structure of serine acetyltransferase isoform 3 in complex with cysteine from entamoeba histolytica 0.9121 67 290
3f1x-assembly1.cif.gz_A three dimensional structure of the serine acetyltransferase from bacteroides vulgatus, northeast structural genomics consortium target bvr62. 0.909 22 293
3t57-assembly1.cif.gz_A activity and crystal structure of arabidopsis udp-n-acetylglucosamine acyltransferase 0.8762 209 284
3p47-assembly1.cif.gz_A-2 crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-cysteine 0.8651 59 290
4mzu-assembly2.cif.gz_J crystal structure of fdtd, a bifunctional ketoisomerase/n-acetyltransferase from shewanella denitrificans 0.8645 215 286
ID Description Score Start End Superfamily
3f1xA02 Mainly Beta;3 Solenoid;UDP N-Acetylglucosamine Acyltransferase; domain 1;Hexapeptide repeat proteins 0.9796 211 293 2.160.10.10
3gvdA02 Mainly Beta;3 Solenoid;UDP N-Acetylglucosamine Acyltransferase; domain 1;Hexapeptide repeat proteins 0.935 211 291 2.160.10.10
3f1xA01 Mainly Alpha;Orthogonal Bundle;serine acetyltransferase, domain 1;serine acetyltransferase, domain 1 0.9246 58 210 1.10.3130.10
3p1bA02 Mainly Beta;3 Solenoid;UDP N-Acetylglucosamine Acyltransferase; domain 1;Hexapeptide repeat proteins 0.9211 211 290 2.160.10.10
3f1xA01 Mainly Alpha;Orthogonal Bundle;serine acetyltransferase, domain 1;serine acetyltransferase, domain 1 0.9067 58 210 1.10.3130.10
ID Description Score Start End GO Terms
AF-A0A2N5A334-F1-model_v4 Serine acetyltransferase 0.99 64 247 GO:0016740
AF-U1NF76-F1-model_v4 serine O-acetyltransferase (EC 2.3.1.30) 0.9884 138 290 GO:0005737
GO:0006535
GO:0009001
AF-A0A836RBC1-F1-model_v4 Serine acetyltransferase 0.9852 128 287 GO:0005737
GO:0006535
GO:0009001
AF-A0A4Y8C884-F1-model_v4 Serine O-acetyltransferase 0.9837 171 292 GO:0005737
GO:0006535
GO:0009001
AF-K1UKK0-F1-model_v4 Serine O-acetyltransferase 0.9802 142 272 GO:0009001

Feature Viewer

pLDDT pTM Quality
86.08 0.81 High
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Predicted Structure (AlphaFold2)

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