F267535

General Info

Members Datasets Scaffolds Average Seq Length
176 115 352 379

Family's Representative Sequence

Representative Sequence 3300005290|Ga0065712_10068479|Ga0065712_100684797
Length 408
Sequence MPFDAHVPFVDLTTPHLELEEQLVEVFRQAVRSAAFIGGAEVETFEREFAAYCGSKYCVGVANGTDAVRLALMAAGVGRGDTVITVSHTFIATVEAITQAGAEAEFVDIDARTYCMSPRALSDYLSALQLDSKTGRPLGRRTGTPVKAVLPVHLYGQVAEMEEILAIAAQYNLLVIEDACQAHGAEYLCGDGSWRRAGTFGKAAAFSFYPGKNLGACGEAGAVATDDEQIASTIRMLREHGQARKYFHDLQGSNARLDAIQAAFLRVKLGQLDGWNAQRRAAAARYRDLLATTPDIIPPYESPRSKAVYHLYVVRTRNRDRLAAHLYSRGIVTGMHYPLPVHLQNCYREWGYAETSLPVTEQVAAQILSLPMFPSLTFEQQQRVIAEIQSLTPDEPSPAVVAGPPSVK

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
42 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
57 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
67 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
71 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
72 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
73 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
74 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
75 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
76 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
77 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
78 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
79 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
80 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
81 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
99 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
103 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
104 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
105 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
106 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
107 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
108 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
109 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
110 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
111 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
114 2947233263 Pseudomonas synxantha W2I4 Isolate Rhizosphere
115 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.86
Metatranscriptomes 0
Isolates 1.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.57
Nodule 0
Rhizoplane 2.84
Rhizosphere 89.2
Stem 0
Stem Tuber 0
Unclassified 10.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10068479 3300005290 Bacteria 10372
2 Ga0058692_1001598 3300003856 Bacteria 8162
3 Ga0070683_100195190 3300005329 Bacteria 1922
4 Ga0070692_10032069 3300005345 Bacteria 2639
5 Ga0070675_100000057 3300005354 Bacteria 66900
6 Ga0070675_100018466 3300005354 Bacteria 5551
7 Ga0070673_100016356 3300005364 Bacteria 5243
8 Ga0070688_100029098 3300005365 Bacteria 3305
9 Ga0070703_10000151 3300005406 Bacteria 35770
10 Ga0070678_100002239 3300005456 Bacteria 10524
11 Ga0068867_100237770 3300005459 Bacteria 1475
12 Ga0070706_100000335 3300005467 Bacteria 57018
13 Ga0070706_100012882 3300005467 Bacteria 7741
14 Ga0070707_100139177 3300005468 Bacteria 2362
15 Ga0070698_100379399 3300005471 Bacteria 1346
16 Ga0070697_100174559 3300005536 Bacteria 1820
17 Ga0070697_100219071 3300005536 Bacteria 1622
18 Ga0070672_100109221 3300005543 Bacteria 2253
19 Ga0070704_100003657 3300005549 Bacteria 8847
20 Ga0070664_100026573 3300005564 Bacteria 4803
21 Ga0068857_100032334 3300005577 Bacteria 4626
22 Ga0068857_100089705 3300005577 Bacteria 2751
23 Ga0068864_100054188 3300005618 Bacteria 3461
24 Ga0068870_10179978 3300005840 Bacteria 1268
25 Ga0075428_100000809 3300006844 Bacteria 32693
26 Ga0075428_100003107 3300006844 Bacteria 18128
27 Ga0075428_100035391 3300006844 Bacteria 5505
28 Ga0075430_100003491 3300006846 Bacteria 13156
29 Ga0075431_100003590 3300006847 Bacteria 15035
30 Ga0075431_100015200 3300006847 Bacteria 7800
31 Ga0075433_10072528 3300006852 Bacteria 3028
32 Ga0075433_10158913 3300006852 Bacteria 2011
33 Ga0075434_100050964 3300006871 Bacteria 4112
34 Ga0075429_100002156 3300006880 Bacteria 16424
35 Ga0075429_100010438 3300006880 Bacteria 8037
36 Ga0068865_100007718 3300006881 Bacteria 6631
37 Ga0105244_10096549 3300009036 Bacteria 1450
38 Ga0105240_10327216 3300009093 Bacteria 1745
39 Ga0111539_10003888 3300009094 Bacteria 19657
40 Ga0111539_10069414 3300009094 Bacteria 4161
41 Ga0111539_10089123 3300009094 Bacteria 3625
42 Ga0114129_10000155 3300009147 Bacteria 72923
43 Ga0114129_10017550 3300009147 Bacteria 10190
44 Ga0114129_10029965 3300009147 Bacteria 7705
45 Ga0114129_10063835 3300009147 Bacteria 5140
46 Ga0114129_10087127 3300009147 Bacteria 4330
47 Ga0114129_10376984 3300009147 Bacteria 1874
48 Ga0105243_10000083 3300009148 Bacteria 107982
49 Ga0105241_10025524 3300009174 Bacteria 4392
50 Ga0105242_10000027 3300009176 Bacteria 106530
51 Ga0105238_10162120 3300009551 Bacteria 2212
52 Ga0105239_10409075 3300010375 Bacteria 1536
53 Ga0157369_10093563 3300013105 Unclassified 3208
54 Ga0157380_10192302 3300014326 Bacteria 1803
55 Ga0157379_10024283 3300014968 Bacteria 5382
56 Ga0157379_10035593 3300014968 Unclassified 4439
57 Ga0213876_10029294 3300021384 Bacteria 2901
58 Ga0213875_10000010 3300021388 Bacteria 370268
59 Ga0213875_10019767 3300021388 Bacteria 3237
60 Ga0207653_10000012 3300025885 Bacteria 159557
61 Ga0207682_10010754 3300025893 Bacteria 3583
62 Ga0207684_10000209 3300025910 Bacteria 90695
63 Ga0207684_10017615 3300025910 Bacteria 6128
64 Ga0207695_10254614 3300025913 Bacteria 1654
65 Ga0207659_10000340 3300025926 Bacteria 27925
66 Ga0207659_10011392 3300025926 Bacteria 5616
67 Ga0207659_10028118 3300025926 Bacteria 3817
68 Ga0207686_10000004 3300025934 Bacteria 349251
69 Ga0207709_10000028 3300025935 Bacteria 334429
70 Ga0207669_10118093 3300025937 Bacteria 1794
71 Ga0207691_10022377 3300025940 Bacteria 5962
72 Ga0207651_10042909 3300025960 Bacteria 3015
73 Ga0207703_10230513 3300026035 Bacteria 1660
74 Ga0207648_10031928 3300026089 Bacteria 4652
75 Ga0207674_10067231 3300026116 Bacteria 3608
76 Ga0209371_1000466 3300027312 Bacteria 39817
77 Ga0207428_10005958 3300027907 Bacteria 11286
78 Ga0268256_1000423 3300030500 Bacteria 38191
79 Ga0307405_10000945 3300031731 Bacteria 11609
80 Ga0307410_10057224 3300031852 Bacteria 2654
81 Ga0307407_10005508 3300031903 Bacteria 5503
82 Ga0307409_100051900 3300031995 Bacteria 3141
83 Ga0307416_100003649 3300032002 Bacteria 9101
84 Ga0307411_10022524 3300032005 Bacteria 3711
85 Ga0307415_100012605 3300032126 Bacteria 4895
86 Ga0436364_0143772 3300037853 Bacteria 1247
87 Ga0436364_1013559 3300037853 Bacteria 49805
88 Ga0436364_1343448 3300037853 Bacteria 154245
89 Ga0436365_0408190 3300039437 Bacteria 3835
90 Ga0436365_0916881 3300039437 Bacteria 2654
91 Ga0436365_1920225 3300039437 Unclassified 1921
92 Ga0436362_0852660 3300039453 Bacteria 1467
93 Ga0453684_0107877 3300044712 Unclassified 3390
94 Ga0453684_0347377 3300044712 Bacteria 1674
95 Ga0451576_0174377 3300045051 Bacteria 2245
96 Ga0451576_0286634 3300045051 Bacteria 1722
97 Ga0495594_0183008 3300046499 Bacteria 1193
98 Ga0495621_0010258 3300046539 Bacteria 2860
99 Ga0496102_0003183 3300048905 Bacteria 13917
100 Ga0496104_0036315 3300048907 Bacteria 4607
101 Ga0496107_0247285 3300048910 Unclassified 1327
102 Ga0496110_0045450 3300048913 Bacteria 3839
103 Ga0496112_0018465 3300048915 Bacteria 6568
104 Ga0496119_0000012 3300048922 Bacteria 411917
105 Ga0496120_0000004 3300048923 Bacteria 534793
106 Ga0496121_0006644 3300048924 Bacteria 14238
107 Ga0496124_0008956 3300048927 Bacteria 10366
108 Ga0501031_0027560 3300049568 Unclassified 3704
109 Ga0501031_0031489 3300049568 Bacteria 3460
110 Ga0501031_0113234 3300049568 Bacteria 1772
111 Ga0501032_0029127 3300049569 Unclassified 3792
112 Ga0501033_0010889 3300049570 Bacteria 6972
113 Ga0501037_0043764 3300049573 Bacteria 3290
114 Ga0501038_0094620 3300049574 Unclassified 2497
115 Ga0501038_0111018 3300049574 Bacteria 2272
116 Ga0501038_0211428 3300049574 Bacteria 1552
117 Ga0501039_0036232 3300049575 Bacteria 3806
118 Ga0501041_0012653 3300049577 Bacteria 4999
119 Ga0501041_0026847 3300049577 Bacteria 3467
120 Ga0501041_0068691 3300049577 Bacteria 2172
121 Ga0501042_0009264 3300049578 Bacteria 6552
122 Ga0501042_0027094 3300049578 Bacteria 4029
123 Ga0501042_0027848 3300049578 Bacteria 3976
124 Ga0501043_0000831 3300049579 Bacteria 27415
125 Ga0501046_0007731 3300049580 Bacteria 9426
126 Ga0501046_0021600 3300049580 Bacteria 5311
127 Ga0501046_0063489 3300049580 Bacteria 2884
128 Ga0501046_0254307 3300049580 Bacteria 1292
129 Ga0501047_0000185 3300049581 Bacteria 75684
130 Ga0501048_0027272 3300049582 Unclassified 4153
131 Ga0501048_0064382 3300049582 Unclassified 2593
132 Ga0501070_0009323 3300049586 Bacteria 8303
133 Ga0501073_0050870 3300049589 Unclassified 2902
134 Ga0501073_0084166 3300049589 Bacteria 2213
135 Ga0501075_0111733 3300049591 Bacteria 2078
136 Ga0501079_0112241 3300049741 Bacteria 2118
137 Ga0501080_0088371 3300049742 Bacteria 2879
138 Ga0501080_0319887 3300049742 Bacteria 1405
139 Ga0501081_0059609 3300049743 Bacteria 2643
140 Ga0501083_0023397 3300049744 Bacteria 4285
141 Ga0501083_0056887 3300049744 Unclassified 2620
142 Ga0501035_0008639 3300049822 Bacteria 9482
143 Ga0501035_0020048 3300049822 Bacteria 6142
144 Ga0501035_0088187 3300049822 Unclassified 2734
145 Ga0501035_0184984 3300049822 Unclassified 1793
146 Ga0501044_0006432 3300049823 Bacteria 12978
147 Ga0501045_0029074 3300049824 Bacteria 3992
148 Ga0501045_0032526 3300049824 Unclassified 3780
149 nmdc:mga05p37_123345_c1 3300050507 Bacteria 3182
150 nmdc:mga05p37_32692_c1 3300050507 Bacteria 6365
151 nmdc:mga05p37_33_c1 3300050507 Bacteria 112965
152 nmdc:mga05p37_38327_c1 3300050507 Bacteria 5879
153 nmdc:mga05p37_6996_c1 3300050507 Bacteria 13296
154 nmdc:mga09592_24136_c1 3300050508 Bacteria 5029
155 nmdc:mga09592_87769_c1 3300050508 Bacteria 2656
156 nmdc:mga0qj67_13105_c1 3300050509 Bacteria 6262
157 nmdc:mga06r32_126313_c1 3300050510 Bacteria 2527
158 nmdc:mga06r32_200914_c1 3300050510 Unclassified 1981
159 nmdc:mga06r32_49402_c1 3300050510 Bacteria 4022
160 nmdc:mga08y16_193395_c1 3300050511 Bacteria 2109
161 nmdc:mga08y16_26558_c1 3300050511 Bacteria 6103
162 nmdc:mga08y16_67522_c1 3300050511 Bacteria 3729
163 nmdc:mga0n895_640148_c1 3300050512 Unclassified 1063
164 nmdc:mga0n895_87483_c1 3300050512 Bacteria 3113
165 nmdc:mga0a205_10315_c1 3300050515 Bacteria 8585
166 nmdc:mga0a205_30608_c1 3300050515 Bacteria 5155
167 nmdc:mga0a205_82143_c1 3300050515 Bacteria 3112
168 Ga0500622_0000143 3300053156 Bacteria 76095
169 Ga0501084_0001466 3300054114 Bacteria 18733
170 Ga0501084_0187900 3300054114 Bacteria 1743
171 Ga0501084_0251506 3300054114 Unclassified 1492
172 Ga0501082_0070190 3300060353 Unclassified 3017
173 Ga0501082_0086350 3300060353 Bacteria 2706
174 Ga0530510_0074601 3300061734 Bacteria 2463
175 2947236418 2947233263 Bacteria 6439278
176 8055532596 8055531788 Bacteria 5249694
177 Ga0065712_10068479
178 Ga0058692_1001598
179 Ga0070683_100195190
180 Ga0070692_10032069
181 Ga0070675_100000057
182 Ga0070675_100018466
183 Ga0070673_100016356
184 Ga0070688_100029098
185 Ga0070703_10000151
186 Ga0070678_100002239
187 Ga0068867_100237770
188 Ga0070706_100000335
189 Ga0070706_100012882
190 Ga0070707_100139177
191 Ga0070698_100379399
192 Ga0070697_100174559
193 Ga0070697_100219071
194 Ga0070672_100109221
195 Ga0070704_100003657
196 Ga0070664_100026573
197 Ga0068857_100032334
198 Ga0068857_100089705
199 Ga0068864_100054188
200 Ga0068870_10179978
201 Ga0075428_100000809
202 Ga0075428_100003107
203 Ga0075428_100035391
204 Ga0075430_100003491
205 Ga0075431_100003590
206 Ga0075431_100015200
207 Ga0075433_10072528
208 Ga0075433_10158913
209 Ga0075434_100050964
210 Ga0075429_100002156
211 Ga0075429_100010438
212 Ga0068865_100007718
213 Ga0105244_10096549
214 Ga0105240_10327216
215 Ga0111539_10003888
216 Ga0111539_10069414
217 Ga0111539_10089123
218 Ga0114129_10000155
219 Ga0114129_10017550
220 Ga0114129_10029965
221 Ga0114129_10063835
222 Ga0114129_10087127
223 Ga0114129_10376984
224 Ga0105243_10000083
225 Ga0105241_10025524
226 Ga0105242_10000027
227 Ga0105238_10162120
228 Ga0105239_10409075
229 Ga0157369_10093563
230 Ga0157380_10192302
231 Ga0157379_10024283
232 Ga0157379_10035593
233 Ga0213876_10029294
234 Ga0213875_10000010
235 Ga0213875_10019767
236 Ga0207653_10000012
237 Ga0207682_10010754
238 Ga0207684_10000209
239 Ga0207684_10017615
240 Ga0207695_10254614
241 Ga0207659_10000340
242 Ga0207659_10011392
243 Ga0207659_10028118
244 Ga0207686_10000004
245 Ga0207709_10000028
246 Ga0207669_10118093
247 Ga0207691_10022377
248 Ga0207651_10042909
249 Ga0207703_10230513
250 Ga0207648_10031928
251 Ga0207674_10067231
252 Ga0209371_1000466
253 Ga0207428_10005958
254 Ga0268256_1000423
255 Ga0307405_10000945
256 Ga0307410_10057224
257 Ga0307407_10005508
258 Ga0307409_100051900
259 Ga0307416_100003649
260 Ga0307411_10022524
261 Ga0307415_100012605
262 Ga0436364_0143772
263 Ga0436364_1013559
264 Ga0436364_1343448
265 Ga0436365_0408190
266 Ga0436365_0916881
267 Ga0436365_1920225
268 Ga0436362_0852660
269 Ga0453684_0107877
270 Ga0453684_0347377
271 Ga0451576_0174377
272 Ga0451576_0286634
273 Ga0495594_0183008
274 Ga0495621_0010258
275 Ga0496102_0003183
276 Ga0496104_0036315
277 Ga0496107_0247285
278 Ga0496110_0045450
279 Ga0496112_0018465
280 Ga0496119_0000012
281 Ga0496120_0000004
282 Ga0496121_0006644
283 Ga0496124_0008956
284 Ga0501031_0027560
285 Ga0501031_0031489
286 Ga0501031_0113234
287 Ga0501032_0029127
288 Ga0501033_0010889
289 Ga0501037_0043764
290 Ga0501038_0094620
291 Ga0501038_0111018
292 Ga0501038_0211428
293 Ga0501039_0036232
294 Ga0501041_0012653
295 Ga0501041_0026847
296 Ga0501041_0068691
297 Ga0501042_0009264
298 Ga0501042_0027094
299 Ga0501042_0027848
300 Ga0501043_0000831
301 Ga0501046_0007731
302 Ga0501046_0021600
303 Ga0501046_0063489
304 Ga0501046_0254307
305 Ga0501047_0000185
306 Ga0501048_0027272
307 Ga0501048_0064382
308 Ga0501070_0009323
309 Ga0501073_0050870
310 Ga0501073_0084166
311 Ga0501075_0111733
312 Ga0501079_0112241
313 Ga0501080_0088371
314 Ga0501080_0319887
315 Ga0501081_0059609
316 Ga0501083_0023397
317 Ga0501083_0056887
318 Ga0501035_0008639
319 Ga0501035_0020048
320 Ga0501035_0088187
321 Ga0501035_0184984
322 Ga0501044_0006432
323 Ga0501045_0029074
324 Ga0501045_0032526
325 nmdc:mga05p37_123345_c1
326 nmdc:mga05p37_32692_c1
327 nmdc:mga05p37_33_c1
328 nmdc:mga05p37_38327_c1
329 nmdc:mga05p37_6996_c1
330 nmdc:mga09592_24136_c1
331 nmdc:mga09592_87769_c1
332 nmdc:mga0qj67_13105_c1
333 nmdc:mga06r32_126313_c1
334 nmdc:mga06r32_200914_c1
335 nmdc:mga06r32_49402_c1
336 nmdc:mga08y16_193395_c1
337 nmdc:mga08y16_26558_c1
338 nmdc:mga08y16_67522_c1
339 nmdc:mga0n895_640148_c1
340 nmdc:mga0n895_87483_c1
341 nmdc:mga0a205_10315_c1
342 nmdc:mga0a205_30608_c1
343 nmdc:mga0a205_82143_c1
344 Ga0500622_0000143
345 Ga0501084_0001466
346 Ga0501084_0187900
347 Ga0501084_0251506
348 Ga0501082_0070190
349 Ga0501082_0086350
350 Ga0530510_0074601
351 2947236418
352 8055532596

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

17

389

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7n63-assembly1.cif.gz_A-2 x-ray structure of hcan_0200, an aminotransferase from helicobacter canadensis in complex with its external aldimine 0.9749 16 368
3frk-assembly1.cif.gz_B x-ray structure of qdtb from t. thermosaccharolyticum in complex with a plp:tdp-3-aminoquinovose aldimine 0.9672 15 367
5u1z-assembly2.cif.gz_C x-ray structure of the wlarg aminotransferase, apo form, from campylobacter jejune 0.9667 16 369
5u24-assembly2.cif.gz_D x-ray structure of the wlarg aminotransferase from campylobacter jejuni, k184a mutant in complex with tdp-fuc3n 0.9644 16 369
7b0d-assembly1.cif.gz_B sugar transaminase from archaeoglobus veneficus 0.9587 14 364
ID Description Score Start End Superfamily
5u1zC02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9687 252 369 3.90.1150.10
5u1zC02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9526 252 369 3.90.1150.10
3b8xA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9459 30 242 3.40.640.10
3bb8A01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9448 31 242 3.40.640.10
1b9iA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9445 30 246 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A0F9QKC3-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9927 18 151 GO:0000271
GO:0008483
GO:0030170
AF-A0A0E9LUI0-F1-model_v4 Aminotransferase 0.9922 15 198 GO:0000271
GO:0008483
GO:0030170
AF-A0A7C4TEN6-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.986 9 368 GO:0000271
GO:0008483
GO:0030170
AF-A0A6J4V6R2-F1-model_v4 Lipopolysaccharide biosynthesis protein RffA 0.9858 48 198 GO:0000271
GO:0008483
GO:0030170
AF-A0A3C2EBX8-F1-model_v4 Aminotransferase 0.9846 16 272 GO:0000271
GO:0008483
GO:0030170

Map