F267085

General Info

Members Datasets Scaffolds Average Seq Length
175 121 350 338

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0018479|Ga0501031_0018479_492_1586
Length 359
Sequence MTPPNRASAEGPGTTGQSPNLHSAGRVRAGKPEALVVMSRDVFESQFDLERLLAQVPDPVFVDDLDVPALDERLRRVEVLLTGWGAPRLDGARLDRMPRLKAMLHCAGTIRPQVSEEFWLRGVRASTVAEANAVPVAEFTLAAVIFAGKKAPFIAADAEARRSNGLRIHRYGELSNLGRTVGIVGFSRVGRRVVDLLQQLDDITCLVADPYADPLEVRAAGAELVELDDMLPRVDVLSLHAPALPSTKGMIGARRLAALRDHATLINTARGSLVDTEALEAECASGRINAILDVTDPEPLPADSVLFGLPNVMVTPHLAGSLGTELHRMTDAALDELERYASGAPLVDEITSDDLRLSA

Samples

Sample ID Description Type Environment
1 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
2 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
9 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
10 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
11 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
12 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
13 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
14 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
18 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
19 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
20 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
21 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
22 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
23 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
24 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
25 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
26 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
27 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
28 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
29 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
30 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
31 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
32 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
33 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
34 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
35 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
36 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
37 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
38 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
39 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
40 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
41 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
42 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
43 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
44 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
45 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
46 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
47 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
48 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
49 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
50 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
51 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
52 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
53 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
54 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
55 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
56 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
57 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
58 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
59 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
60 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
61 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
62 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
63 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
64 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
65 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
66 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
81 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
82 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
83 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
84 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
85 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
86 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
87 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
88 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
89 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
95 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
96 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
97 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
98 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
99 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
100 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
101 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
102 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
103 2808606372 Agromyces sp. 23-23 Isolate Unclassified
104 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
105 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
106 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
107 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
108 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
109 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
110 2891562705 Microbispora tritici MT50 Isolate Unclassified
111 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
112 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
113 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
114 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
115 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
116 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
117 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
118 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
119 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
120 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
121 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.71
Metatranscriptomes 1.14
Isolates 13.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.14
Nodule 0
Rhizoplane 0.57
Rhizosphere 84
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501031_0018479 3300049568 Bacteria 4536
2 Ga0055525_1002240 3300003759 Bacteria 2128
3 Ga0070658_10098220 3300005327 Bacteria 2418
4 Ga0070668_100057159 3300005347 Bacteria 3014
5 Ga0070714_100261663 3300005435 Bacteria 1602
6 Ga0070663_100000153 3300005455 Bacteria 34046
7 Ga0070679_100372112 3300005530 Bacteria 1376
8 Ga0070717_10047966 3300006028 Bacteria 3502
9 Ga0114129_10000701 3300009147 Bacteria 42196
10 Ga0157370_10379308 3300013104 Bacteria 1302
11 Ga0206353_10763046 3300020082 Bacteria 3332
12 Ga0206353_11845920 3300020082 Bacteria 2045
13 Ga0209563_100702 3300025230 Bacteria 10489
14 Ga0209646_1000014 3300025246 Bacteria 550484
15 Ga0207652_10055659 3300025921 Bacteria 3403
16 Ga0207664_10226405 3300025929 Bacteria 1624
17 Ga0207678_10000020 3300026067 Bacteria 132096
18 Ga0307515_10160524 3300028794 Bacteria 2295
19 Ga0307512_10005380 3300030522 Bacteria 13389
20 Ga0307406_10236181 3300031901 Bacteria 1368
21 Ga0307407_10018111 3300031903 Bacteria 3554
22 Ga0307412_10115938 3300031911 Bacteria 1921
23 Ga0307411_10006773 3300032005 Bacteria 5767
24 Ga0373931_0232667 3300035691 Bacteria 1114
25 Ga0439442_000279 3300042002 Bacteria 12518
26 Ga0439442_000931 3300042002 Bacteria 5939
27 Ga0466968_0065651 3300044735 Bacteria 1571
28 Ga0466970_0000153 3300044765 Bacteria 32419
29 Ga0495592_0009028 3300046454 Bacteria 7492
30 Ga0495603_0001308 3300046455 Bacteria 14497
31 Ga0495603_0003412 3300046455 Bacteria 9459
32 Ga0495629_0002915 3300046459 Bacteria 13047
33 Ga0495629_0003135 3300046459 Bacteria 12529
34 Ga0495651_0038540 3300046462 Bacteria 3721
35 Ga0495653_0003964 3300046463 Bacteria 11952
36 Ga0495606_0002838 3300046507 Bacteria 19219
37 Ga0495608_0001732 3300046511 Bacteria 15645
38 Ga0495628_0006677 3300046516 Bacteria 10063
39 Ga0495630_0004294 3300046517 Bacteria 9994
40 Ga0495666_0082272 3300046526 Bacteria 1522
41 Ga0495652_0007623 3300046529 Bacteria 9971
42 Ga0495640_0018300 3300046533 Bacteria 5200
43 Ga0495587_0003403 3300046536 Bacteria 10615
44 Ga0495622_0007093 3300046557 Bacteria 5206
45 Ga0495667_0000619 3300046559 Bacteria 22665
46 Ga0495668_0000382 3300046616 Bacteria 58410
47 Ga0495634_0003728 3300046642 Bacteria 12139
48 Ga0495625_0000716 3300046660 Bacteria 46718
49 Ga0495635_0004196 3300046663 Bacteria 9994
50 Ga0495657_0002246 3300046675 Bacteria 16344
51 Ga0495599_0002896 3300046678 Bacteria 9982
52 Ga0495623_0001729 3300046679 Bacteria 14652
53 Ga0495646_0004828 3300046680 Bacteria 8514
54 Ga0495613_0000601 3300046689 Bacteria 28951
55 Ga0495613_0022239 3300046689 Bacteria 4725
56 Ga0495600_0005737 3300046809 Bacteria 7500
57 Ga0495604_0007724 3300047317 Bacteria 8518
58 Ga0495604_0065893 3300047317 Bacteria 2756
59 Ga0495674_0047751 3300047319 Bacteria 3793
60 Ga0495676_0026491 3300047321 Bacteria 4989
61 Ga0495675_0001951 3300047444 Bacteria 12307
62 Ga0495684_0005353 3300047471 Bacteria 9993
63 Ga0495602_0004791 3300048088 Bacteria 14142
64 Ga0495614_0001044 3300048089 Bacteria 11827
65 Ga0495626_0000069 3300048091 Bacteria 139104
66 Ga0496102_0061770 3300048905 Bacteria 3430
67 Ga0496117_0000187 3300048920 Bacteria 127214
68 Ga0496117_0002107 3300048920 Bacteria 26174
69 Ga0496117_0009489 3300048920 Bacteria 9044
70 Ga0496117_0049852 3300048920 Bacteria 2974
71 Ga0496117_0050522 3300048920 Bacteria 2948
72 Ga0496118_0002506 3300048921 Bacteria 24638
73 Ga0496118_0015576 3300048921 Bacteria 7031
74 Ga0496119_0001842 3300048922 Bacteria 24511
75 Ga0496120_0002458 3300048923 Bacteria 18672
76 Ga0496125_0212000 3300048928 Bacteria 1257
77 Ga0501031_0004549 3300049568 Bacteria 8994
78 Ga0501032_0007237 3300049569 Bacteria 8118
79 Ga0501032_0024857 3300049569 Bacteria 4132
80 Ga0501033_0001460 3300049570 Bacteria 20958
81 Ga0501033_0016547 3300049570 Bacteria 5581
82 Ga0501033_0017716 3300049570 Bacteria 5380
83 Ga0501033_0024897 3300049570 Bacteria 4512
84 Ga0501033_0034027 3300049570 Bacteria 3824
85 Ga0501034_0000622 3300049571 Bacteria 55475
86 Ga0501034_0006353 3300049571 Bacteria 12725
87 Ga0501034_0007437 3300049571 Bacteria 11659
88 Ga0501034_0023418 3300049571 Bacteria 6292
89 Ga0501034_0319746 3300049571 Bacteria 1485
90 Ga0501036_0008915 3300049572 Bacteria 8243
91 Ga0501036_0009130 3300049572 Bacteria 8154
92 Ga0501037_0001882 3300049573 Bacteria 15254
93 Ga0501037_0049315 3300049573 Bacteria 3083
94 Ga0501037_0049348 3300049573 Bacteria 3082
95 Ga0501038_0008081 3300049574 Bacteria 9680
96 Ga0501038_0008676 3300049574 Bacteria 9331
97 Ga0501038_0019051 3300049574 Bacteria 6190
98 Ga0501039_0025404 3300049575 Bacteria 4551
99 Ga0501040_0038812 3300049576 Bacteria 3237
100 Ga0501041_0017165 3300049577 Bacteria 4306
101 Ga0501042_0002700 3300049578 Bacteria 10918
102 Ga0501043_0020350 3300049579 Bacteria 5205
103 Ga0501043_0046396 3300049579 Bacteria 3417
104 Ga0501043_0057094 3300049579 Bacteria 3065
105 Ga0501046_0007960 3300049580 Bacteria 9273
106 Ga0501046_0010261 3300049580 Bacteria 8062
107 Ga0501046_0010506 3300049580 Bacteria 7941
108 Ga0501046_0121772 3300049580 Bacteria 1984
109 Ga0501047_0001622 3300049581 Bacteria 21938
110 Ga0501047_0003988 3300049581 Bacteria 13874
111 Ga0501047_0008688 3300049581 Bacteria 9591
112 Ga0501047_0031430 3300049581 Bacteria 5121
113 Ga0501047_0077953 3300049581 Bacteria 3187
114 Ga0501047_0100524 3300049581 Bacteria 2771
115 Ga0501048_0007891 3300049582 Bacteria 8062
116 Ga0501048_0015580 3300049582 Bacteria 5614
117 Ga0501048_0016114 3300049582 Bacteria 5511
118 Ga0501067_0004957 3300049583 Bacteria 7395
119 Ga0501068_0003750 3300049584 Bacteria 8223
120 Ga0501069_0011386 3300049585 Bacteria 4715
121 Ga0501070_0015779 3300049586 Bacteria 6352
122 Ga0501070_0017372 3300049586 Bacteria 6038
123 Ga0501071_0008541 3300049587 Bacteria 6774
124 Ga0501072_0012042 3300049588 Bacteria 6608
125 Ga0501073_0025829 3300049589 Bacteria 4207
126 Ga0501074_0016235 3300049590 Bacteria 5408
127 Ga0501074_0080900 3300049590 Bacteria 2330
128 Ga0501223_020665 3300049663 Bacteria 1289
129 Ga0501079_0001236 3300049741 Bacteria 17901
130 Ga0501080_0025729 3300049742 Bacteria 5466
131 Ga0501080_0028221 3300049742 Bacteria 5219
132 Ga0501080_0186771 3300049742 Bacteria 1906
133 Ga0501083_0000055 3300049744 Bacteria 82183
134 Ga0501083_0015234 3300049744 Bacteria 5383
135 Ga0501035_0003738 3300049822 Bacteria 14513
136 Ga0501035_0020915 3300049822 Bacteria 6013
137 Ga0501035_0029137 3300049822 Bacteria 5034
138 Ga0501035_0036838 3300049822 Bacteria 4432
139 Ga0501035_0038094 3300049822 Bacteria 4353
140 Ga0501035_0057993 3300049822 Bacteria 3451
141 Ga0501035_0105332 3300049822 Bacteria 2473
142 Ga0501044_0001200 3300049823 Bacteria 30724
143 Ga0501044_0003883 3300049823 Bacteria 16749
144 Ga0501044_0011446 3300049823 Bacteria 9610
145 Ga0501044_0022777 3300049823 Bacteria 6671
146 Ga0501044_0046461 3300049823 Bacteria 4494
147 Ga0501045_0270521 3300049824 Bacteria 1265
148 nmdc:mga05p37_1940_c1 3300050507 Bacteria 24098
149 Ga0495601_0108857 3300053077 Bacteria 1793
150 Ga0495619_0354267 3300053085 Bacteria 1015
151 Ga0501084_0004162 3300054114 Bacteria 11796
152 Ga0501082_0009138 3300060353 Bacteria 8545
153 2747952712 2747842429 Bacteria 3914386
154 2758227340 2757320536 Bacteria 3629334
155 2808893056 2808606370 Bacteria 4942454
156 2808903266 2808606372 Bacteria 4649509
157 2808903500 2808606372 Bacteria 4649509
158 2816423943 2816332119 Bacteria 8120218
159 2816510915 2816332139 Bacteria 9138787
160 2844844010 2844841374 Bacteria 3917147
161 2856743942 2856741275 Bacteria 8096094
162 2873158457 2873151551 Bacteria 8625867
163 2887482757 2887478801 Bacteria 8972725
164 2891566979 2891562705 Bacteria 8039471
165 2939601070 2939598168 Bacteria 4687164
166 2939675763 2939674588 Bacteria 4844420
167 2945945356 2945941187 Bacteria 4682474
168 2946045445 2946041624 Bacteria 4191385
169 2953998452 2953998280 Bacteria 4812144
170 2974305204 2974302888 Bacteria 4369871
171 3006324839 3006321560 Bacteria 8247479
172 8008489316 8008485437 Bacteria 7198341
173 8016256410 8016254467 Bacteria 3797036
174 8025528195 8025524527 Bacteria 7197316
175 8054110364 8054107350 Bacteria 5022511
176 Ga0501031_0018479
177 Ga0055525_1002240
178 Ga0070658_10098220
179 Ga0070668_100057159
180 Ga0070714_100261663
181 Ga0070663_100000153
182 Ga0070679_100372112
183 Ga0070717_10047966
184 Ga0114129_10000701
185 Ga0157370_10379308
186 Ga0206353_10763046
187 Ga0206353_11845920
188 Ga0209563_100702
189 Ga0209646_1000014
190 Ga0207652_10055659
191 Ga0207664_10226405
192 Ga0207678_10000020
193 Ga0307515_10160524
194 Ga0307512_10005380
195 Ga0307406_10236181
196 Ga0307407_10018111
197 Ga0307412_10115938
198 Ga0307411_10006773
199 Ga0373931_0232667
200 Ga0439442_000279
201 Ga0439442_000931
202 Ga0466968_0065651
203 Ga0466970_0000153
204 Ga0495592_0009028
205 Ga0495603_0001308
206 Ga0495603_0003412
207 Ga0495629_0002915
208 Ga0495629_0003135
209 Ga0495651_0038540
210 Ga0495653_0003964
211 Ga0495606_0002838
212 Ga0495608_0001732
213 Ga0495628_0006677
214 Ga0495630_0004294
215 Ga0495666_0082272
216 Ga0495652_0007623
217 Ga0495640_0018300
218 Ga0495587_0003403
219 Ga0495622_0007093
220 Ga0495667_0000619
221 Ga0495668_0000382
222 Ga0495634_0003728
223 Ga0495625_0000716
224 Ga0495635_0004196
225 Ga0495657_0002246
226 Ga0495599_0002896
227 Ga0495623_0001729
228 Ga0495646_0004828
229 Ga0495613_0000601
230 Ga0495613_0022239
231 Ga0495600_0005737
232 Ga0495604_0007724
233 Ga0495604_0065893
234 Ga0495674_0047751
235 Ga0495676_0026491
236 Ga0495675_0001951
237 Ga0495684_0005353
238 Ga0495602_0004791
239 Ga0495614_0001044
240 Ga0495626_0000069
241 Ga0496102_0061770
242 Ga0496117_0000187
243 Ga0496117_0002107
244 Ga0496117_0009489
245 Ga0496117_0049852
246 Ga0496117_0050522
247 Ga0496118_0002506
248 Ga0496118_0015576
249 Ga0496119_0001842
250 Ga0496120_0002458
251 Ga0496125_0212000
252 Ga0501031_0004549
253 Ga0501032_0007237
254 Ga0501032_0024857
255 Ga0501033_0001460
256 Ga0501033_0016547
257 Ga0501033_0017716
258 Ga0501033_0024897
259 Ga0501033_0034027
260 Ga0501034_0000622
261 Ga0501034_0006353
262 Ga0501034_0007437
263 Ga0501034_0023418
264 Ga0501034_0319746
265 Ga0501036_0008915
266 Ga0501036_0009130
267 Ga0501037_0001882
268 Ga0501037_0049315
269 Ga0501037_0049348
270 Ga0501038_0008081
271 Ga0501038_0008676
272 Ga0501038_0019051
273 Ga0501039_0025404
274 Ga0501040_0038812
275 Ga0501041_0017165
276 Ga0501042_0002700
277 Ga0501043_0020350
278 Ga0501043_0046396
279 Ga0501043_0057094
280 Ga0501046_0007960
281 Ga0501046_0010261
282 Ga0501046_0010506
283 Ga0501046_0121772
284 Ga0501047_0001622
285 Ga0501047_0003988
286 Ga0501047_0008688
287 Ga0501047_0031430
288 Ga0501047_0077953
289 Ga0501047_0100524
290 Ga0501048_0007891
291 Ga0501048_0015580
292 Ga0501048_0016114
293 Ga0501067_0004957
294 Ga0501068_0003750
295 Ga0501069_0011386
296 Ga0501070_0015779
297 Ga0501070_0017372
298 Ga0501071_0008541
299 Ga0501072_0012042
300 Ga0501073_0025829
301 Ga0501074_0016235
302 Ga0501074_0080900
303 Ga0501223_020665
304 Ga0501079_0001236
305 Ga0501080_0025729
306 Ga0501080_0028221
307 Ga0501080_0186771
308 Ga0501083_0000055
309 Ga0501083_0015234
310 Ga0501035_0003738
311 Ga0501035_0020915
312 Ga0501035_0029137
313 Ga0501035_0036838
314 Ga0501035_0038094
315 Ga0501035_0057993
316 Ga0501035_0105332
317 Ga0501044_0001200
318 Ga0501044_0003883
319 Ga0501044_0011446
320 Ga0501044_0022777
321 Ga0501044_0046461
322 Ga0501045_0270521
323 nmdc:mga05p37_1940_c1
324 Ga0495601_0108857
325 Ga0495619_0354267
326 Ga0501084_0004162
327 Ga0501082_0009138
328 2747952712
329 2758227340
330 2808893056
331 2808903266
332 2808903500
333 2816423943
334 2816510915
335 2844844010
336 2856743942
337 2873158457
338 2887482757
339 2891566979
340 2939601070
341 2939675763
342 2945945356
343 2946045445
344 2953998452
345 2974305204
346 3006324839
347 8008489316
348 8016256410
349 8025528195
350 8054110364

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

144

319

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.8813 112 299
7cvp-assembly1.cif.gz_B the crystal structure of human phgdh from biortus. 0.8737 108 315
6rj6-assembly1.cif.gz_B crystal structure of phgdh in complex with bi-4924 0.8691 111 315
6rj6-assembly1.cif.gz_A crystal structure of phgdh in complex with bi-4924 0.8678 114 315
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.8514 112 299
ID Description Score Start End Superfamily
af_Q2FVW4_141_284_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9165 157 297 3.40.50.720
af_Q7SZY8_153_293_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9131 159 297 3.40.50.720
af_Q2FZW9_121_261_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9069 159 297 3.40.50.720
af_Q9VII9_150_293_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.903 157 297 3.40.50.720
af_Q9P7Q1_142_301_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.896 157 297 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1Y2KHQ0-F1-model_v4 deleted 0.9688 2 336
AF-A0A2R4JVS3-F1-model_v4 Hydroxyacid dehydrogenase 0.9677 4 338 GO:0005829
GO:0016618
GO:0030267
GO:0051287
AF-A0A558GTG4-F1-model_v4 Hydroxyacid dehydrogenase 0.961 5 339 GO:0016616
GO:0051287
AF-A0A221NSY6-F1-model_v4 Hydroxyacid dehydrogenase 0.9597 1 339 GO:0005829
GO:0016618
GO:0030267
GO:0051287
AF-A0A6G4VK09-F1-model_v4 Hydroxyacid dehydrogenase 0.9578 13 336 GO:0005829
GO:0016618
GO:0030267
GO:0051287

Map