F267048

General Info

Members Datasets Scaffolds Average Seq Length
175 123 350 331

Family's Representative Sequence

Representative Sequence 3300048917|Ga0496114_0092234|Ga0496114_0092234_483_1592
Length 369
Sequence MTTQEVHMAETVAMVGTRKGLWIGRSDDQRESWTWEGPHFDMQEVYSCMVDGRGGRPRLLAGAASSWLGPQVAYSDDFGRSWEHGPDGGIRFPADTGASVERVWQLQPGIEDDVVWAGTEPGAVWRSDDRGHTFTLERALWDHPQRQEWGAGFGGQAFHTLLPHPSDPASLTAAISTGGVYRTTDGGESWSPRNQGIRAEFLPEGSQFPEFGQCVHKVARHPSRPERLFAQNHGGVYRSEDEGGSWTYIADGLPSDFGFPIVVDPHDPDTVYLFPLHGADGRYPPDGVARVWRSRDAGDTWEALGDGGLPDRFFVGVMRDAMSVDDHEETGLYVGARDGSVWGSFDGGASWGELVRGLPDVMAVRVGVV

Samples

Sample ID Description Type Environment
1 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
49 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
67 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
68 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
69 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
70 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
71 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
74 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
75 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
76 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
81 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
82 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
83 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
86 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
89 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
92 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
93 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
94 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
95 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
96 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
97 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
98 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
102 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
103 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
104 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
107 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
108 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
109 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
110 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
111 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
112 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
113 2643221576 Nocardioides sp. Root614 Isolate Unclassified
114 2643221590 Nocardioides sp. Root682 Isolate Unclassified
115 2643221615 Nocardioides sp. Root224 Isolate Unclassified
116 2643221617 Nocardioides sp. Root79 Isolate Unclassified
117 2643221620 Nocardioides sp. Root240 Isolate Unclassified
118 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
119 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
120 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
121 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
122 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
123 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.29
Metatranscriptomes 3.43
Isolates 6.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16
Nodule 0
Rhizoplane 6.86
Rhizosphere 70.86
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496114_0092234 3300048917 Bacteria 2573
2 JGI25406J46586_10001735 3300003203 Bacteria 10244
3 Ga0070683_100203032 3300005329 Bacteria 1883
4 Ga0070682_100019653 3300005337 Bacteria 3965
5 Ga0070660_100004593 3300005339 Bacteria 9546
6 Ga0070660_100088031 3300005339 Bacteria 2445
7 Ga0070691_10026423 3300005341 Bacteria 2706
8 Ga0070669_100090698 3300005353 Bacteria 2291
9 Ga0070688_100104310 3300005365 Bacteria 1875
10 Ga0070659_100011242 3300005366 Bacteria 6614
11 Ga0070667_100052453 3300005367 Bacteria 3442
12 Ga0070701_10002269 3300005438 Bacteria 7367
13 Ga0070700_100001607 3300005441 Bacteria 11269
14 Ga0070663_100093241 3300005455 Bacteria 2234
15 Ga0070663_100288876 3300005455 Bacteria 1309
16 Ga0070678_100117092 3300005456 Bacteria 2095
17 Ga0070685_10013768 3300005466 Bacteria 4274
18 Ga0070684_100124287 3300005535 Bacteria 2323
19 Ga0068853_100012277 3300005539 Bacteria 6966
20 Ga0070672_100018450 3300005543 Bacteria 5044
21 Ga0070686_100013228 3300005544 Bacteria 4719
22 Ga0070664_100042536 3300005564 Bacteria 3835
23 Ga0068859_100415668 3300005617 Bacteria 1441
24 Ga0068864_100223583 3300005618 Bacteria 1738
25 Ga0068866_10032939 3300005718 Bacteria 2509
26 Ga0068861_100001132 3300005719 Bacteria 16571
27 Ga0068870_10008992 3300005840 Bacteria 4519
28 Ga0068860_100000357 3300005843 Bacteria 60525
29 Ga0075365_10002437 3300006038 Bacteria 9126
30 Ga0075365_10004266 3300006038 Bacteria 7543
31 Ga0075365_10018846 3300006038 Bacteria 4251
32 Ga0075365_10022856 3300006038 Bacteria 3924
33 Ga0075365_10028205 3300006038 Bacteria 3579
34 Ga0075365_10075837 3300006038 Bacteria 2270
35 Ga0075365_10253514 3300006038 Bacteria 1237
36 Ga0075363_100008121 3300006048 Bacteria 4871
37 Ga0075363_100187917 3300006048 Bacteria 1177
38 Ga0075364_10025496 3300006051 Bacteria 3764
39 Ga0075362_10014859 3300006177 Bacteria 3153
40 Ga0075367_10033815 3300006178 Bacteria 2949
41 Ga0075367_10064393 3300006178 Bacteria 2193
42 Ga0075367_10183522 3300006178 Bacteria 1305
43 Ga0075370_10004582 3300006353 Bacteria 6738
44 Ga0075370_10010620 3300006353 Bacteria 4823
45 Ga0075370_10161444 3300006353 Bacteria 1315
46 Ga0068865_100004294 3300006881 Bacteria 8602
47 Ga0097620_100415645 3300006931 Bacteria 1441
48 Ga0105245_10011249 3300009098 Bacteria 7791
49 Ga0105248_10064687 3300009177 Bacteria 4106
50 Ga0105249_10033827 3300009553 Bacteria 4629
51 Ga0105239_10024036 3300010375 Bacteria 6713
52 Ga0157372_10563392 3300013307 Bacteria 1328
53 Ga0163163_10049418 3300014325 Bacteria 4139
54 Ga0163163_10700591 3300014325 Bacteria 1076
55 Ga0157380_10014389 3300014326 Bacteria 5787
56 Ga0157377_10005006 3300014745 Bacteria 6181
57 Ga0163161_10145371 3300017792 Bacteria 1798
58 Ga0197907_10027998 3300020069 Bacteria 2785
59 Ga0206351_10620533 3300020077 Bacteria 1596
60 Ga0206352_10413489 3300020078 Bacteria 1622
61 Ga0206353_11148034 3300020082 Bacteria 1961
62 Ga0206353_11355270 3300020082 Bacteria 6291
63 Ga0154015_1245279 3300020610 Bacteria 1892
64 Ga0207642_10012286 3300025899 Bacteria 3087
65 Ga0207643_10011985 3300025908 Bacteria 4682
66 Ga0207657_10002812 3300025919 Bacteria 18725
67 Ga0207690_10013570 3300025932 Bacteria 4898
68 Ga0207691_10033122 3300025940 Bacteria 4813
69 Ga0207661_10063176 3300025944 Bacteria 2998
70 Ga0207679_10019958 3300025945 Bacteria 4514
71 Ga0207651_10063030 3300025960 Bacteria 2587
72 Ga0207640_10079143 3300025981 Bacteria 2240
73 Ga0207658_10037123 3300025986 Bacteria 3498
74 Ga0207639_10249061 3300026041 Bacteria 1548
75 Ga0207678_10082436 3300026067 Bacteria 2752
76 Ga0207678_10189129 3300026067 Bacteria 1759
77 Ga0207708_10000180 3300026075 Bacteria 49555
78 Ga0207648_10026054 3300026089 Bacteria 5200
79 Ga0207676_10152203 3300026095 Bacteria 1994
80 Ga0207675_100009623 3300026118 Bacteria 9043
81 Ga0268264_10000242 3300028381 Bacteria 103492
82 Ga0307405_10092692 3300031731 Bacteria 2005
83 Ga0307413_10011141 3300031824 Bacteria 4403
84 Ga0307410_10009201 3300031852 Bacteria 5526
85 Ga0307410_10037803 3300031852 Bacteria 3156
86 Ga0307406_10009051 3300031901 Bacteria 5569
87 Ga0307406_10110197 3300031901 Bacteria 1894
88 Ga0307407_10029022 3300031903 Bacteria 2965
89 Ga0307407_10070928 3300031903 Bacteria 2073
90 Ga0307409_100011758 3300031995 Bacteria 5539
91 Ga0307409_100041927 3300031995 Bacteria 3423
92 Ga0307409_100049191 3300031995 Bacteria 3213
93 Ga0307409_100309635 3300031995 Bacteria 1473
94 Ga0307416_100069000 3300032002 Bacteria 2923
95 Ga0307416_100301047 3300032002 Bacteria 1594
96 Ga0307414_10037424 3300032004 Bacteria 3249
97 Ga0307414_10042549 3300032004 Bacteria 3087
98 Ga0307411_10025645 3300032005 Bacteria 3536
99 Ga0307411_10126724 3300032005 Bacteria 1858
100 Ga0307415_100324523 3300032126 Bacteria 1285
101 Ga0395899_0065007 3300037312 Bacteria 2681
102 Ga0395900_0261290 3300037418 Bacteria 1729
103 Ga0395900_0281852 3300037418 Bacteria 1654
104 Ga0395898_0247654 3300037466 Bacteria 1699
105 Ga0395901_0009730 3300038443 Bacteria 9745
106 Ga0395901_0080857 3300038443 Bacteria 3394
107 Ga0395901_0204140 3300038443 Bacteria 2071
108 Ga0466972_0095289 3300044658 Bacteria 1410
109 Ga0466965_0003303 3300044683 Bacteria 7060
110 Ga0466966_0003665 3300044684 Bacteria 10138
111 Ga0466966_0012496 3300044684 Bacteria 5624
112 Ga0466961_0072324 3300044693 Bacteria 2187
113 Ga0466961_0128928 3300044693 Bacteria 1586
114 Ga0466963_0036361 3300044694 Bacteria 3212
115 Ga0466963_0092175 3300044694 Bacteria 2064
116 Ga0466964_0020100 3300044706 Bacteria 2570
117 Ga0466964_0066682 3300044706 Bacteria 1511
118 Ga0466970_0078699 3300044765 Bacteria 1779
119 Ga0466970_0130522 3300044765 Bacteria 1380
120 Ga0466957_0023156 3300044842 Bacteria 3669
121 Ga0466957_0146818 3300044842 Bacteria 1523
122 Ga0466960_0005994 3300044901 Bacteria 4853
123 Ga0466960_0021403 3300044901 Bacteria 2878
124 Ga0466960_0043935 3300044901 Bacteria 2128
125 Ga0466960_0173875 3300044901 Bacteria 1164
126 Ga0466958_0045097 3300045836 Bacteria 2659
127 Ga0466967_0040685 3300045976 Bacteria 4003
128 Ga0466967_0184475 3300045976 Bacteria 1970
129 Ga0466967_0251677 3300045976 Bacteria 1688
130 Ga0495582_0104108 3300046473 Bacteria 1591
131 Ga0496101_0232180 3300048904 Bacteria 1434
132 Ga0496103_0045554 3300048906 Bacteria 2706
133 Ga0496106_0088411 3300048909 Bacteria 2388
134 Ga0496107_0142272 3300048910 Bacteria 1773
135 Ga0496108_0034546 3300048911 Bacteria 4202
136 Ga0496108_0181083 3300048911 Bacteria 1825
137 Ga0496110_0051253 3300048913 Bacteria 3627
138 Ga0496110_0097983 3300048913 Bacteria 2627
139 Ga0496114_0095658 3300048917 Bacteria 2528
140 Ga0496114_0230875 3300048917 Bacteria 1626
141 Ga0496115_0315269 3300048918 Bacteria 1280
142 Ga0501031_0139986 3300049568 Bacteria 1581
143 Ga0501039_0074612 3300049575 Bacteria 2636
144 Ga0501067_0011781 3300049583 Bacteria 4844
145 Ga0501067_0040948 3300049583 Bacteria 2573
146 Ga0501067_0066677 3300049583 Bacteria 1992
147 Ga0501068_0041720 3300049584 Bacteria 2758
148 Ga0501068_0060448 3300049584 Bacteria 2301
149 Ga0501069_0032690 3300049585 Bacteria 2864
150 Ga0501070_0169167 3300049586 Bacteria 1800
151 Ga0501072_0032669 3300049588 Bacteria 4076
152 Ga0501080_0130441 3300049742 Bacteria 2327
153 nmdc:mga00v17_13749_c1 3300050491 Bacteria 4499
154 nmdc:mga00v17_19041_c1 3300050491 Bacteria 3912
155 nmdc:mga00v17_57074_c1 3300050491 Bacteria 2388
156 nmdc:mga0yw44_103642_c1 3300050492 Bacteria 1815
157 nmdc:mga0yw44_31795_c1 3300050492 Bacteria 3072
158 nmdc:mga0yw44_58734_c1 3300050492 Bacteria 2351
159 nmdc:mga0yw44_63080_c1 3300050492 Bacteria 2278
160 nmdc:mga0yw44_9054_c1 3300050492 Bacteria 5006
161 nmdc:mga07m45_10139_c1 3300050496 Bacteria 4912
162 Ga0500644_0000271 3300053088 Bacteria 29196
163 Ga0500556_0001400 3300053104 Bacteria 10503
164 Ga0530510_0294426 3300061734 Bacteria 1214
165 2643893265 2643221576 Bacteria 5214352
166 2643961676 2643221590 Bacteria 5214697
167 2644090043 2643221615 Bacteria 5487866
168 2644099561 2643221617 Bacteria 5139111
169 2644116246 2643221620 Bacteria 5134593
170 2644319888 2643221657 Bacteria 5490246
171 2774393727 2773857762 Bacteria 5971770
172 2809195395 2808606439 Bacteria 5952208
173 2812350271 2811994878 Bacteria 5992952
174 2855387503 2855386786 Bacteria 4752232
175 2891972106 2891968417 Bacteria 5821697
176 Ga0496114_0092234
177 JGI25406J46586_10001735
178 Ga0070683_100203032
179 Ga0070682_100019653
180 Ga0070660_100004593
181 Ga0070660_100088031
182 Ga0070691_10026423
183 Ga0070669_100090698
184 Ga0070688_100104310
185 Ga0070659_100011242
186 Ga0070667_100052453
187 Ga0070701_10002269
188 Ga0070700_100001607
189 Ga0070663_100093241
190 Ga0070663_100288876
191 Ga0070678_100117092
192 Ga0070685_10013768
193 Ga0070684_100124287
194 Ga0068853_100012277
195 Ga0070672_100018450
196 Ga0070686_100013228
197 Ga0070664_100042536
198 Ga0068859_100415668
199 Ga0068864_100223583
200 Ga0068866_10032939
201 Ga0068861_100001132
202 Ga0068870_10008992
203 Ga0068860_100000357
204 Ga0075365_10002437
205 Ga0075365_10004266
206 Ga0075365_10018846
207 Ga0075365_10022856
208 Ga0075365_10028205
209 Ga0075365_10075837
210 Ga0075365_10253514
211 Ga0075363_100008121
212 Ga0075363_100187917
213 Ga0075364_10025496
214 Ga0075362_10014859
215 Ga0075367_10033815
216 Ga0075367_10064393
217 Ga0075367_10183522
218 Ga0075370_10004582
219 Ga0075370_10010620
220 Ga0075370_10161444
221 Ga0068865_100004294
222 Ga0097620_100415645
223 Ga0105245_10011249
224 Ga0105248_10064687
225 Ga0105249_10033827
226 Ga0105239_10024036
227 Ga0157372_10563392
228 Ga0163163_10049418
229 Ga0163163_10700591
230 Ga0157380_10014389
231 Ga0157377_10005006
232 Ga0163161_10145371
233 Ga0197907_10027998
234 Ga0206351_10620533
235 Ga0206352_10413489
236 Ga0206353_11148034
237 Ga0206353_11355270
238 Ga0154015_1245279
239 Ga0207642_10012286
240 Ga0207643_10011985
241 Ga0207657_10002812
242 Ga0207690_10013570
243 Ga0207691_10033122
244 Ga0207661_10063176
245 Ga0207679_10019958
246 Ga0207651_10063030
247 Ga0207640_10079143
248 Ga0207658_10037123
249 Ga0207639_10249061
250 Ga0207678_10082436
251 Ga0207678_10189129
252 Ga0207708_10000180
253 Ga0207648_10026054
254 Ga0207676_10152203
255 Ga0207675_100009623
256 Ga0268264_10000242
257 Ga0307405_10092692
258 Ga0307413_10011141
259 Ga0307410_10009201
260 Ga0307410_10037803
261 Ga0307406_10009051
262 Ga0307406_10110197
263 Ga0307407_10029022
264 Ga0307407_10070928
265 Ga0307409_100011758
266 Ga0307409_100041927
267 Ga0307409_100049191
268 Ga0307409_100309635
269 Ga0307416_100069000
270 Ga0307416_100301047
271 Ga0307414_10037424
272 Ga0307414_10042549
273 Ga0307411_10025645
274 Ga0307411_10126724
275 Ga0307415_100324523
276 Ga0395899_0065007
277 Ga0395900_0261290
278 Ga0395900_0281852
279 Ga0395898_0247654
280 Ga0395901_0009730
281 Ga0395901_0080857
282 Ga0395901_0204140
283 Ga0466972_0095289
284 Ga0466965_0003303
285 Ga0466966_0003665
286 Ga0466966_0012496
287 Ga0466961_0072324
288 Ga0466961_0128928
289 Ga0466963_0036361
290 Ga0466963_0092175
291 Ga0466964_0020100
292 Ga0466964_0066682
293 Ga0466970_0078699
294 Ga0466970_0130522
295 Ga0466957_0023156
296 Ga0466957_0146818
297 Ga0466960_0005994
298 Ga0466960_0021403
299 Ga0466960_0043935
300 Ga0466960_0173875
301 Ga0466958_0045097
302 Ga0466967_0040685
303 Ga0466967_0184475
304 Ga0466967_0251677
305 Ga0495582_0104108
306 Ga0496101_0232180
307 Ga0496103_0045554
308 Ga0496106_0088411
309 Ga0496107_0142272
310 Ga0496108_0034546
311 Ga0496108_0181083
312 Ga0496110_0051253
313 Ga0496110_0097983
314 Ga0496114_0095658
315 Ga0496114_0230875
316 Ga0496115_0315269
317 Ga0501031_0139986
318 Ga0501039_0074612
319 Ga0501067_0011781
320 Ga0501067_0040948
321 Ga0501067_0066677
322 Ga0501068_0041720
323 Ga0501068_0060448
324 Ga0501069_0032690
325 Ga0501070_0169167
326 Ga0501072_0032669
327 Ga0501080_0130441
328 nmdc:mga00v17_13749_c1
329 nmdc:mga00v17_19041_c1
330 nmdc:mga00v17_57074_c1
331 nmdc:mga0yw44_103642_c1
332 nmdc:mga0yw44_31795_c1
333 nmdc:mga0yw44_58734_c1
334 nmdc:mga0yw44_63080_c1
335 nmdc:mga0yw44_9054_c1
336 nmdc:mga07m45_10139_c1
337 Ga0500644_0000271
338 Ga0500556_0001400
339 Ga0530510_0294426
340 2643893265
341 2643961676
342 2644090043
343 2644099561
344 2644116246
345 2644319888
346 2774393727
347 2809195395
348 2812350271
349 2855387503
350 2891972106

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02012

BNR

BNR/Asp-box repeat

181

192

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3b7f-assembly1.cif.gz_A crystal structure of a putative glycosyl hydrolase with bnr repeats (reut_b4987) from ralstonia eutropha jmp134 at 2.20 a resolution 0.9431 2 359
3b7f-assembly1.cif.gz_A crystal structure of a putative glycosyl hydrolase with bnr repeats (reut_b4987) from ralstonia eutropha jmp134 at 2.20 a resolution 0.933 2 359
5mq0-assembly1.cif.gz_J structure of a spliceosome remodeled for exon ligation 0.7744 38 349
4x61-assembly1.cif.gz_B crystal structure of prmt5:mep50 with epz015666 and sam 0.7598 38 339
6v0p-assembly1.cif.gz_B prmt5 complex bound to covalent pbm inhibitor brd6711 0.7569 38 340
ID Description Score Start End Superfamily
3b7fA00 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.9288 1 359 2.130.10.10
3b7fA00 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.9138 1 359 2.130.10.10
af_A0A1D6GA50_2_134_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7895 38 177 2.130.10.10
af_A0A0R0FM96_16_129_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.774 37 171 2.130.10.10
af_Q7ZW33_33_230_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7728 8 229 2.130.10.10
ID Description Score Start End GO Terms
AF-N1UYK0-F1-model_v4 Glycosyl hydrolase 0.9845 62 361 GO:0000272
GO:0010411
GO:0016798
AF-A0A4R1FBT2-F1-model_v4 BNR/Asp-box repeat protein 0.9842 3 328 GO:0000272
GO:0010411
GO:0016798
AF-A0A7J0BZQ7-F1-model_v4 Glycosyl hydrolase 0.9838 83 361 GO:0000272
GO:0010411
GO:0016798
AF-A0A2V8A2Y0-F1-model_v4 Exo-alpha-sialidase 0.9838 153 357 GO:0000272
GO:0010411
GO:0016798
AF-A0A4Y3NL94-F1-model_v4 Glycosyl hydrolase 0.9835 2 361 GO:0000272
GO:0010411
GO:0016798

Map