F266745
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 175 | 145 | 149 | 913 |
Family's Representative Sequence
| Representative Sequence | 3300039437|Ga0436365_0481900|Ga0436365_0481900_4371_7385 |
| Length | 1004 |
| Sequence | LRAAGDLRLKAADENSLASRPDLRHNFTPLCHTQSRAGDEGKIEGFAGKPGNRSASQFSTVFSCCCVGFAAPLAMSQSPPSSPAVDILKSGLARINRDLTFLMECLREVLAELGEDALAAVVPWTNDDAAATAVVNGATLTPPSRRGQVYAVAFQLLNLIEENVSTQVRRAREKAAGIAAEPGLWGANLRRLRESGLDGATLAAGLAGILVEPVLTAHPTEAKRAAALTQHRRLFGLLEARENPFLTAAEQAENRAEIKLTLERLWRTGEILLRKPEVAAERRSLMYYFREVFPQTVTRLDLRLRSAWEETGFDPALLGDALPQIRFGTWVGGDRDGHPLVTAEVTAQTLADLRAGALDVLRAQLAALAERLPLSVHFQSAPPALAARIEALGQELDGESATVFREAPDEPWKQFARLLVLKLPLPPGRAVQPVNGAINYHRPEELTADLDLLAGSLRAVGAGRLAARDVVPVRRLVETFGFHLAALDIRQNSHAHDLALSQLMRAADVPDAATFPTWSESARLEFLDLELRSARPFTQPGTTTGSEADAALACFRLLGAQLDVYGPGGLGALIVSMTRRLSDLLVVYLLAREAGLALRTPEGSVCRLPVVPLFETAEDLRRAPDILRGFLAHPVTQRSLGATRVQQVMLGYSDSNKESGILASQWALHQAQSALCEVGRTAAGGPVRIRFFHGRGGTISRGAGPTHRFLDALPRGSIGGDLRLTEQGETIAQKYANGATAAFNLEALLAGVAGASLTQFSPEQKAENAGLANVVEALVASSRRAYEGLLGAPDFMTFYRGATPIDVLEQSSIGSRPSRRTGSRKLSDLRAIPWVFSWNQARFYLPGWYGVGTALAELKTHAPEDFAALGRALDGGWPFLRYVLMNVELNLTSADLDIMTRYAALVSDDAVRTRFFDAIAGEFERSRSQLDALFGKPLQQRRPRAAKTLALRADALRVLHGEQITLLRQWRDAHDAGDDAKEQALLPALLLSINAIASGLRTTG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2595698237 | Methylobacterium sp. UNCCL125 | Isolate | Unclassified |
| 2 | 2687453341 | Pirellula sp. SH-Sr6A | Isolate | Unclassified |
| 3 | 2842694124 | Methylopila sp. R-72369 | Isolate | Unclassified |
| 4 | 2856320880 | Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 | Isolate | Nodule |
| 5 | 2857349434 | Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 | Isolate | Nodule |
| 6 | 2869278585 | Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 | Isolate | Nodule |
| 7 | 2874139085 | Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 | Isolate | Nodule |
| 8 | 2878738818 | Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 | Isolate | Nodule |
| 9 | 2889306138 | Methylobacterium sp. PvR107 | Isolate | Rhizosphere |
| 10 | 2902330777 | Methylobacterium sp. 2A | Isolate | Unclassified |
| 11 | 2902405164 | Methylobacterium sp. P1-11 | Isolate | Unclassified |
| 12 | 2924776078 | Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 | Isolate | Nodule |
| 13 | 2928125067 | Methylobacterium sp. 1973 | Isolate | Unclassified |
| 14 | 2937877337 | Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 | Isolate | Nodule |
| 15 | 2937972304 | Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 | Isolate | Nodule |
| 16 | 2958034702 | Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 | Isolate | Nodule |
| 17 | 2958041894 | Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 | Isolate | Nodule |
| 18 | 2958084443 | Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 | Isolate | Nodule |
| 19 | 2968016561 | Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 | Isolate | Nodule |
| 20 | 2970469710 | Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 | Isolate | Nodule |
| 21 | 2970593180 | Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 | Isolate | Nodule |
| 22 | 2977942078 | Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 | Isolate | Nodule |
| 23 | 2987636660 | Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 | Isolate | Nodule |
| 24 | 2996348954 | Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 | Isolate | Nodule |
| 25 | 3004203850 | Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 | Isolate | Nodule |
| 26 | 3004275668 | Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 | Isolate | Nodule |
| 27 | 3300001977 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 | Metagenome | Rhizosphere |
| 28 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 29 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 30 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 31 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 32 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 35 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 36 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 37 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 38 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 39 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 40 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 41 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 42 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 43 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 44 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 45 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 46 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 47 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 57 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 59 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 60 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 61 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 78 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 79 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 80 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 81 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 82 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 83 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 84 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 85 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 86 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 87 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 88 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 89 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 90 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 91 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 92 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 93 | 3300034820 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 | Metagenome | Rhizosphere |
| 94 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 95 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 96 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 97 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 98 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 99 | 3300041408 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 | Metagenome | Rhizosphere |
| 100 | 3300042127 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 | Metagenome | Rhizosphere |
| 101 | 3300042130 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 | Metagenome | Rhizosphere |
| 102 | 3300042144 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 | Metagenome | Rhizosphere |
| 103 | 3300042532 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 | Metagenome | Rhizosphere |
| 104 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 105 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 106 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 107 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 108 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 109 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 115 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 116 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 117 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049665 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought | Metagenome | Rhizosphere |
| 133 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 138 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 139 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 140 | 3300053103 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere | Metagenome | Endosphere |
| 141 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 142 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 143 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 144 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 145 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85.14 |
| Metatranscriptomes | 0 |
| Isolates | 14.86 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8 |
| Nodule | 10.86 |
| Rhizoplane | 1.14 |
| Rhizosphere | 70.29 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 9.71 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24746J21847_1000253 | 3300001977 | Bacteria | 7509 |
| 2 | JGI25165J46597_1000169 | 3300003214 | Bacteria | 103007 |
| 3 | rootH2_10000533 | 3300003320 | Bacteria | 48184 |
| 4 | rootH2_10062715 | 3300003320 | Bacteria | 5324 |
| 5 | rootH2_10095611 | 3300003320 | Bacteria | 5946 |
| 6 | rootH1_10014008 | 3300003323 | Bacteria | 30277 |
| 7 | rootH1_10161710 | 3300003323 | Bacteria | 9882 |
| 8 | Ga0065704_10087356 | 3300005289 | Bacteria | 3033 |
| 9 | Ga0070658_10004960 | 3300005327 | Bacteria | 10851 |
| 10 | Ga0070658_10010619 | 3300005327 | Bacteria | 7378 |
| 11 | Ga0070661_100001136 | 3300005344 | Bacteria | 18729 |
| 12 | Ga0070661_100003697 | 3300005344 | Bacteria | 10547 |
| 13 | Ga0070681_10049575 | 3300005458 | Bacteria | 4192 |
| 14 | Ga0068867_100000336 | 3300005459 | Bacteria | 31030 |
| 15 | Ga0070707_100032738 | 3300005468 | Bacteria | 4954 |
| 16 | Ga0070707_100043908 | 3300005468 | Bacteria | 4278 |
| 17 | Ga0070679_100048248 | 3300005530 | Bacteria | 4243 |
| 18 | Ga0070697_100005163 | 3300005536 | Bacteria | 10032 |
| 19 | Ga0068853_100000017 | 3300005539 | Bacteria | 170544 |
| 20 | Ga0068855_100063125 | 3300005563 | Bacteria | 4323 |
| 21 | Ga0070664_100010961 | 3300005564 | Bacteria | 7353 |
| 22 | Ga0068856_100000594 | 3300005614 | Bacteria | 39535 |
| 23 | Ga0068860_100000347 | 3300005843 | Bacteria | 62207 |
| 24 | Ga0075363_100018468 | 3300006048 | Unclassified | 3475 |
| 25 | Ga0075362_10000274 | 3300006177 | Bacteria | 14383 |
| 26 | Ga0068871_100000630 | 3300006358 | Bacteria | 24200 |
| 27 | Ga0105240_10000022 | 3300009093 | Bacteria | 387911 |
| 28 | Ga0105240_10052051 | 3300009093 | Bacteria | 5148 |
| 29 | Ga0105243_10000751 | 3300009148 | Bacteria | 31062 |
| 30 | Ga0105241_10010077 | 3300009174 | Archaea | 6939 |
| 31 | Ga0105242_10004036 | 3300009176 | Bacteria | 11410 |
| 32 | Ga0105237_10016884 | 3300009545 | Bacteria | 7575 |
| 33 | Ga0105237_10033505 | 3300009545 | Bacteria | 5204 |
| 34 | Ga0105249_10000130 | 3300009553 | Bacteria | 99880 |
| 35 | Ga0157373_10000438 | 3300013100 | Bacteria | 33098 |
| 36 | Ga0157370_10006773 | 3300013104 | Bacteria | 12570 |
| 37 | Ga0157380_10010459 | 3300014326 | Bacteria | 6675 |
| 38 | Ga0182008_10018186 | 3300014497 | Bacteria | 3640 |
| 39 | Ga0157376_10002977 | 3300014969 | Bacteria | 11619 |
| 40 | Ga0213872_10008164 | 3300021361 | Bacteria | 5077 |
| 41 | Ga0213876_10002633 | 3300021384 | Bacteria | 10490 |
| 42 | Ga0213875_10003625 | 3300021388 | Bacteria | 8731 |
| 43 | Ga0209233_1000010 | 3300025261 | Bacteria | 1194329 |
| 44 | Ga0209050_1000379 | 3300025298 | Bacteria | 83814 |
| 45 | Ga0207705_10005153 | 3300025909 | Bacteria | 9797 |
| 46 | Ga0207707_10013304 | 3300025912 | Bacteria | 7172 |
| 47 | Ga0207695_10000022 | 3300025913 | Bacteria | 659090 |
| 48 | Ga0207649_10000291 | 3300025920 | Bacteria | 38912 |
| 49 | Ga0207649_10003093 | 3300025920 | Bacteria | 9132 |
| 50 | Ga0207694_10000074 | 3300025924 | Bacteria | 118396 |
| 51 | Ga0207686_10003911 | 3300025934 | Bacteria | 7986 |
| 52 | Ga0207709_10000613 | 3300025935 | Bacteria | 29386 |
| 53 | Ga0207679_10013968 | 3300025945 | Bacteria | 5266 |
| 54 | Ga0207712_10000377 | 3300025961 | Bacteria | 39204 |
| 55 | Ga0207639_10000031 | 3300026041 | Bacteria | 170640 |
| 56 | Ga0207702_10000232 | 3300026078 | Bacteria | 64788 |
| 57 | Ga0207648_10002337 | 3300026089 | Bacteria | 20457 |
| 58 | Ga0207674_10088169 | 3300026116 | Bacteria | 3096 |
| 59 | Ga0268264_10001780 | 3300028381 | Bacteria | 19678 |
| 60 | Ga0265326_10000005 | 3300028558 | Bacteria | 257124 |
| 61 | Ga0265334_10000046 | 3300028573 | Bacteria | 93490 |
| 62 | Ga0265323_10001080 | 3300028653 | Bacteria | 14105 |
| 63 | Ga0265338_10002712 | 3300028800 | Bacteria | 25982 |
| 64 | Ga0265338_10013014 | 3300028800 | Bacteria | 9436 |
| 65 | Ga0265324_10002813 | 3300029957 | Bacteria | 8585 |
| 66 | Ga0265330_10006618 | 3300031235 | Bacteria | 5717 |
| 67 | Ga0265329_10001360 | 3300031242 | Bacteria | 11856 |
| 68 | Ga0265327_10000969 | 3300031251 | Bacteria | 41053 |
| 69 | Ga0265316_10000200 | 3300031344 | Bacteria | 69574 |
| 70 | Ga0265316_10003496 | 3300031344 | Bacteria | 15856 |
| 71 | Ga0265316_10004453 | 3300031344 | Bacteria | 13946 |
| 72 | Ga0265316_10016872 | 3300031344 | Bacteria | 6320 |
| 73 | Ga0265316_10018305 | 3300031344 | Bacteria | 6022 |
| 74 | Ga0307408_100000035 | 3300031548 | Bacteria | 205352 |
| 75 | Ga0307408_100005521 | 3300031548 | Bacteria | 8449 |
| 76 | Ga0307408_100010772 | 3300031548 | Bacteria | 6033 |
| 77 | Ga0307406_10010338 | 3300031901 | Bacteria | 5260 |
| 78 | Ga0307407_10000064 | 3300031903 | Bacteria | 42280 |
| 79 | Ga0307412_10000057 | 3300031911 | Bacteria | 145184 |
| 80 | Ga0307409_100000685 | 3300031995 | Bacteria | 15043 |
| 81 | Ga0307414_10000044 | 3300032004 | Bacteria | 137202 |
| 82 | Ga0307414_10001584 | 3300032004 | Bacteria | 11800 |
| 83 | Ga0307411_10005712 | 3300032005 | Bacteria | 6148 |
| 84 | Ga0373959_0000145 | 3300034820 | Bacteria | 15891 |
| 85 | Ga0395899_0000075 | 3300037312 | Bacteria | 178317 |
| 86 | Ga0395898_0000026 | 3300037466 | Bacteria | 374440 |
| 87 | Ga0436365_0481900 | 3300039437 | Bacteria | 35749 |
| 88 | Ga0436365_0912825 | 3300039437 | Bacteria | 101193 |
| 89 | Ga0436363_0350819 | 3300039450 | Bacteria | 8428 |
| 90 | Ga0436362_0243603 | 3300039453 | Bacteria | 3442 |
| 91 | Ga0439453_0000364 | 3300041408 | Bacteria | 4795 |
| 92 | Ga0450890_000015 | 3300042127 | Bacteria | 51898 |
| 93 | Ga0450892_000106 | 3300042130 | Bacteria | 9340 |
| 94 | Ga0450889_000457 | 3300042144 | Bacteria | 4538 |
| 95 | Ga0450893_0001277 | 3300042532 | Bacteria | 3808 |
| 96 | Ga0451577_0002111 | 3300042876 | Bacteria | 24493 |
| 97 | Ga0451577_0065660 | 3300042876 | Bacteria | 3236 |
| 98 | Ga0466965_0009686 | 3300044683 | Bacteria | 4478 |
| 99 | Ga0453684_0001244 | 3300044712 | Bacteria | 77266 |
| 100 | Ga0453684_0009685 | 3300044712 | Bacteria | 16778 |
| 101 | Ga0453684_0011854 | 3300044712 | Bacteria | 14523 |
| 102 | Ga0453684_0032477 | 3300044712 | Bacteria | 7304 |
| 103 | Ga0453684_0040653 | 3300044712 | Bacteria | 6309 |
| 104 | Ga0466971_0000263 | 3300044719 | Bacteria | 20113 |
| 105 | Ga0451576_0000794 | 3300045051 | Bacteria | 61984 |
| 106 | Ga0495639_0008187 | 3300046475 | Bacteria | 4491 |
| 107 | Ga0495639_0009444 | 3300046475 | Bacteria | 4183 |
| 108 | Ga0495664_0002618 | 3300046477 | Bacteria | 9679 |
| 109 | Ga0495594_0019934 | 3300046499 | Bacteria | 3568 |
| 110 | Ga0495643_0000191 | 3300046522 | Bacteria | 97250 |
| 111 | Ga0495674_0000884 | 3300047319 | Bacteria | 28750 |
| 112 | Ga0496108_0067020 | 3300048911 | Bacteria | 3028 |
| 113 | Ga0496112_0012746 | 3300048915 | Bacteria | 7734 |
| 114 | Ga0496125_0000017 | 3300048928 | Bacteria | 508217 |
| 115 | Ga0501031_0002693 | 3300049568 | Bacteria | 11306 |
| 116 | Ga0501032_0002222 | 3300049569 | Bacteria | 15282 |
| 117 | Ga0501033_0000056 | 3300049570 | Bacteria | 107931 |
| 118 | Ga0501033_0000074 | 3300049570 | Bacteria | 94345 |
| 119 | Ga0501037_0000295 | 3300049573 | Bacteria | 42165 |
| 120 | Ga0501038_0001271 | 3300049574 | Bacteria | 22890 |
| 121 | Ga0501039_0001198 | 3300049575 | Bacteria | 19023 |
| 122 | Ga0501040_0003806 | 3300049576 | Bacteria | 9788 |
| 123 | Ga0501041_0018768 | 3300049577 | Bacteria | 4119 |
| 124 | Ga0501042_0004868 | 3300049578 | Bacteria | 8587 |
| 125 | Ga0501042_0007230 | 3300049578 | Bacteria | 7266 |
| 126 | Ga0501043_0000207 | 3300049579 | Bacteria | 53905 |
| 127 | Ga0501043_0000407 | 3300049579 | Bacteria | 38692 |
| 128 | Ga0501046_0012024 | 3300049580 | Bacteria | 7381 |
| 129 | Ga0501047_0001441 | 3300049581 | Bacteria | 23289 |
| 130 | Ga0501048_0010624 | 3300049582 | Bacteria | 6869 |
| 131 | Ga0501070_0001794 | 3300049586 | Bacteria | 18947 |
| 132 | Ga0501071_0002613 | 3300049587 | Bacteria | 11005 |
| 133 | Ga0501071_0015285 | 3300049587 | Bacteria | 5268 |
| 134 | Ga0501227_000337 | 3300049665 | Bacteria | 9839 |
| 135 | Ga0501079_0037438 | 3300049741 | Bacteria | 3739 |
| 136 | Ga0501080_0028520 | 3300049742 | Bacteria | 5194 |
| 137 | Ga0501035_0000003 | 3300049822 | Bacteria | 557461 |
| 138 | Ga0501044_0001193 | 3300049823 | Bacteria | 30796 |
| 139 | Ga0501045_0005471 | 3300049824 | Bacteria | 8790 |
| 140 | nmdc:mga03683_339_c1 | 3300050489 | Bacteria | 13705 |
| 141 | nmdc:mga0k408_1910_c1 | 3300050493 | Bacteria | 11149 |
| 142 | Ga0500555_000094 | 3300053103 | Bacteria | 41445 |
| 143 | Ga0500556_0000535 | 3300053104 | Bacteria | 25895 |
| 144 | Ga0500556_0003080 | 3300053104 | Bacteria | 4998 |
| 145 | Ga0500642_0000955 | 3300053130 | Bacteria | 8349 |
| 146 | Ga0500559_0002532 | 3300053136 | Bacteria | 9385 |
| 147 | Ga0500616_0003832 | 3300053153 | Bacteria | 11125 |
| 148 | Ga0500616_0004853 | 3300053153 | Bacteria | 9388 |
| 149 | Ga0466962_0000060 | 3300061719 | Bacteria | 44650 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300009174 | Ga0105241_10010077 | Ga0105241_100100772 | 766 |
| 2 | 3300042876 | Ga0451577_0065660 | Ga0451577_0065660_755_3226 | 800 |
| 3 | 3300044712 | Ga0453684_0032477 | Ga0453684_0032477_4768_7284 | 806 |
| 4 | 3300026116 | Ga0207674_10088169 | Ga0207674_100881692 | 834 |
| 5 | 3300048911 | Ga0496108_0067020 | Ga0496108_0067020_92_2860 | 834 |
| 6 | 3300048915 | Ga0496112_0012746 | Ga0496112_0012746_330_3098 | 835 |
| 7 | 3300046475 | Ga0495639_0008187 | Ga0495639_0008187_414_3182 | 853 |
| 8 | 3300034820 | Ga0373959_0000145 | Ga0373959_0000145_5706_8507 | 855 |
| 9 | 3300005530 | Ga0070679_100048248 | Ga0070679_1000482483 | 858 |
| 10 | 3300025912 | Ga0207707_10013304 | Ga0207707_100133043 | 858 |
| 11 | 3300025961 | Ga0207712_10000377 | Ga0207712_100003771 | 858 |
| 12 | 3300031235 | Ga0265330_10006618 | Ga0265330_100066183 | 859 |
| 13 | 3300031242 | Ga0265329_10001360 | Ga0265329_100013609 | 859 |
| 14 | 3300031344 | Ga0265316_10000200 | Ga0265316_1000020042 | 859 |
| 15 | 3300014326 | Ga0157380_10010459 | Ga0157380_100104591 | 860 |
| 16 | 3300031344 | Ga0265316_10003496 | Ga0265316_100034966 | 862 |
| 17 | 3300014497 | Ga0182008_10018186 | Ga0182008_100181863 | 865 |
| 18 | 3300045051 | Ga0451576_0000794 | Ga0451576_0000794_56179_58956 | 865 |
| 19 | 3300025924 | Ga0207694_10000074 | Ga0207694_1000007484 | 869 |
| 20 | 3300009176 | Ga0105242_10004036 | Ga0105242_100040367 | 870 |
| 21 | 3300009545 | Ga0105237_10033505 | Ga0105237_100335052 | 870 |
| 22 | 3300025934 | Ga0207686_10003911 | Ga0207686_100039118 | 870 |
| 23 | 3300028800 | Ga0265338_10013014 | Ga0265338_100130141 | 875 |
| 24 | 3300005458 | Ga0070681_10049575 | Ga0070681_100495752 | 877 |
| 25 | 3300005563 | Ga0068855_100063125 | Ga0068855_1000631253 | 877 |
| 26 | 3300009093 | Ga0105240_10052051 | Ga0105240_100520512 | 877 |
| 27 | 3300009553 | Ga0105249_10000130 | Ga0105249_100001301 | 877 |
| 28 | 3300014969 | Ga0157376_10002977 | Ga0157376_100029775 | 877 |
| 29 | 3300021388 | Ga0213875_10003625 | Ga0213875_100036252 | 877 |
| 30 | iso_pu_bacteria | 2857349434 | 2857350876 | 877 |
| 31 | iso_pu_bacteria | 2977942078 | 2977947420 | 877 |
| 32 | iso_pu_bacteria | 2987636660 | 2987638061 | 877 |
| 33 | iso_pu_bacteria | 3004203850 | 3004205617 | 877 |
| 34 | iso_pu_bacteria | 2856320880 | 2856325459 | 878 |
| 35 | iso_pu_bacteria | 2869278585 | 2869285149 | 878 |
| 36 | iso_pu_bacteria | 2874139085 | 2874146086 | 878 |
| 37 | iso_pu_bacteria | 2878738818 | 2878745439 | 878 |
| 38 | iso_pu_bacteria | 2924776078 | 2924783683 | 878 |
| 39 | iso_pu_bacteria | 2937877337 | 2937881911 | 878 |
| 40 | iso_pu_bacteria | 2937972304 | 2937978373 | 878 |
| 41 | iso_pu_bacteria | 2958034702 | 2958040850 | 878 |
| 42 | iso_pu_bacteria | 2958041894 | 2958056932 | 878 |
| 43 | iso_pu_bacteria | 2958084443 | 2958089032 | 878 |
| 44 | iso_pu_bacteria | 2968016561 | 2968018230 | 878 |
| 45 | iso_pu_bacteria | 2970469710 | 2970471596 | 878 |
| 46 | iso_pu_bacteria | 2970593180 | 2970599762 | 878 |
| 47 | iso_pu_bacteria | 2996348954 | 2996350383 | 878 |
| 48 | iso_pu_bacteria | 3004275668 | 3004277081 | 878 |
| 49 | 3300049576 | Ga0501040_0003806 | Ga0501040_0003806_6113_8878 | 879 |
| 50 | 3300049577 | Ga0501041_0018768 | Ga0501041_0018768_89_2854 | 879 |
| 51 | 3300049578 | Ga0501042_0004868 | Ga0501042_0004868_5623_8388 | 879 |
| 52 | 3300049580 | Ga0501046_0012024 | Ga0501046_0012024_2098_4863 | 879 |
| 53 | 3300049587 | Ga0501071_0002613 | Ga0501071_0002613_2068_4833 | 879 |
| 54 | 3300049741 | Ga0501079_0037438 | Ga0501079_0037438_749_3514 | 879 |
| 55 | 3300049742 | Ga0501080_0028520 | Ga0501080_0028520_1562_4327 | 879 |
| 56 | 3300049824 | Ga0501045_0005471 | Ga0501045_0005471_1012_3777 | 879 |
| 57 | 3300003214 | JGI25165J46597_1000169 | JGI25165J46597_100016973 | 880 |
| 58 | 3300025261 | Ga0209233_1000010 | Ga0209233_100001074 | 880 |
| 59 | 3300049578 | Ga0501042_0007230 | Ga0501042_0007230_3599_6352 | 880 |
| 60 | 3300049582 | Ga0501048_0010624 | Ga0501048_0010624_2118_4871 | 880 |
| 61 | 3300005536 | Ga0070697_100005163 | Ga0070697_1000051636 | 881 |
| 62 | iso_pu_bacteria | 2595698237 | 2596372655 | 884 |
| 63 | iso_pu_bacteria | 2889306138 | 2889308404 | 884 |
| 64 | iso_pu_bacteria | 2902330777 | 2902331276 | 884 |
| 65 | iso_pu_bacteria | 2902405164 | 2902410783 | 884 |
| 66 | iso_pu_bacteria | 2928125067 | 2928127551 | 884 |
| 67 | 3300005468 | Ga0070707_100032738 | Ga0070707_1000327382 | 886 |
| 68 | 3300005539 | Ga0068853_100000017 | Ga0068853_10000001712 | 886 |
| 69 | 3300026041 | Ga0207639_10000031 | Ga0207639_1000003112 | 886 |
| 70 | iso_pu_bacteria | 2842694124 | 2842696628 | 887 |
| 71 | 3300031548 | Ga0307408_100010772 | Ga0307408_1000107722 | 894 |
| 72 | 3300037312 | Ga0395899_0000075 | Ga0395899_0000075_29884_32682 | 895 |
| 73 | 3300037466 | Ga0395898_0000026 | Ga0395898_0000026_103544_106342 | 895 |
| 74 | 3300042532 | Ga0450893_0001277 | Ga0450893_0001277_674_3361 | 895 |
| 75 | 3300046475 | Ga0495639_0009444 | Ga0495639_0009444_1187_3928 | 895 |
| 76 | 3300046477 | Ga0495664_0002618 | Ga0495664_0002618_5102_7843 | 895 |
| 77 | 3300046499 | Ga0495594_0019934 | Ga0495594_0019934_19_2760 | 895 |
| 78 | 3300047319 | Ga0495674_0000884 | Ga0495674_0000884_24294_27035 | 895 |
| 79 | 3300003323 | rootH1_10014008 | rootH1_1001400824 | 896 |
| 80 | 3300005614 | Ga0068856_100000594 | Ga0068856_10000059420 | 896 |
| 81 | 3300026078 | Ga0207702_10000232 | Ga0207702_1000023253 | 896 |
| 82 | 3300025298 | Ga0209050_1000379 | Ga0209050_100037967 | 897 |
| 83 | 3300028558 | Ga0265326_10000005 | Ga0265326_10000005156 | 897 |
| 84 | 3300028573 | Ga0265334_10000046 | Ga0265334_100000465 | 897 |
| 85 | 3300028800 | Ga0265338_10002712 | Ga0265338_1000271216 | 897 |
| 86 | 3300029957 | Ga0265324_10002813 | Ga0265324_100028137 | 897 |
| 87 | 3300044683 | Ga0466965_0009686 | Ga0466965_0009686_1635_4433 | 897 |
| 88 | 3300044719 | Ga0466971_0000263 | Ga0466971_0000263_12865_15663 | 897 |
| 89 | 3300061719 | Ga0466962_0000060 | Ga0466962_0000060_38291_41089 | 897 |
| 90 | 3300005344 | Ga0070661_100003697 | Ga0070661_1000036977 | 898 |
| 91 | 3300009093 | Ga0105240_10000022 | Ga0105240_10000022286 | 898 |
| 92 | 3300025913 | Ga0207695_10000022 | Ga0207695_10000022233 | 898 |
| 93 | 3300025920 | Ga0207649_10000291 | Ga0207649_1000029132 | 898 |
| 94 | 3300049569 | Ga0501032_0002222 | Ga0501032_0002222_10535_13330 | 898 |
| 95 | 3300049570 | Ga0501033_0000074 | Ga0501033_0000074_15120_17915 | 898 |
| 96 | 3300003323 | rootH1_10161710 | rootH1_101617107 | 900 |
| 97 | 3300053153 | Ga0500616_0004853 | Ga0500616_0004853_2547_5309 | 900 |
| 98 | iso_pu_bacteria | 2687453341 | 2688392891 | 900 |
| 99 | 3300044712 | Ga0453684_0009685 | Ga0453684_0009685_6294_9053 | 902 |
| 100 | 3300044712 | Ga0453684_0011854 | Ga0453684_0011854_7338_10097 | 902 |
| 101 | 3300006358 | Ga0068871_100000630 | Ga0068871_1000006302 | 903 |
| 102 | 3300042876 | Ga0451577_0002111 | Ga0451577_0002111_106_2880 | 903 |
| 103 | 3300044712 | Ga0453684_0040653 | Ga0453684_0040653_1834_4614 | 903 |
| 104 | 3300028653 | Ga0265323_10001080 | Ga0265323_100010806 | 904 |
| 105 | 3300031344 | Ga0265316_10004453 | Ga0265316_100044539 | 904 |
| 106 | 3300031344 | Ga0265316_10018305 | Ga0265316_100183054 | 904 |
| 107 | 3300049568 | Ga0501031_0002693 | Ga0501031_0002693_7768_10566 | 905 |
| 108 | 3300049573 | Ga0501037_0000295 | Ga0501037_0000295_2771_5569 | 905 |
| 109 | 3300049575 | Ga0501039_0001198 | Ga0501039_0001198_12725_15523 | 905 |
| 110 | 3300049579 | Ga0501043_0000207 | Ga0501043_0000207_45520_48318 | 905 |
| 111 | 3300049579 | Ga0501043_0000407 | Ga0501043_0000407_13223_16021 | 905 |
| 112 | 3300049581 | Ga0501047_0001441 | Ga0501047_0001441_4163_6961 | 905 |
| 113 | 3300049586 | Ga0501070_0001794 | Ga0501070_0001794_13519_16317 | 905 |
| 114 | 3300049587 | Ga0501071_0015285 | Ga0501071_0015285_1383_4181 | 905 |
| 115 | 3300049822 | Ga0501035_0000003 | Ga0501035_0000003_83713_86511 | 905 |
| 116 | 3300049823 | Ga0501044_0001193 | Ga0501044_0001193_7508_10306 | 905 |
| 117 | 3300005468 | Ga0070707_100043908 | Ga0070707_1000439082 | 906 |
| 118 | 3300021361 | Ga0213872_10008164 | Ga0213872_100081643 | 906 |
| 119 | 3300021384 | Ga0213876_10002633 | Ga0213876_100026332 | 906 |
| 120 | 3300039437 | Ga0436365_0481900 | Ga0436365_0481900_4371_7385 | 906 |
| 121 | 3300039450 | Ga0436363_0350819 | Ga0436363_0350819_3492_6218 | 906 |
| 122 | 3300039453 | Ga0436362_0243603 | Ga0436362_0243603_599_3325 | 906 |
| 123 | 3300049665 | Ga0501227_000337 | Ga0501227_000337_69_2822 | 906 |
| 124 | 3300050489 | nmdc:mga03683_339_c1 | nmdc:mga03683_339_c1_4117_6843 | 906 |
| 125 | 3300050493 | nmdc:mga0k408_1910_c1 | nmdc:mga0k408_1910_c1_5455_8181 | 906 |
| 126 | 3300053103 | Ga0500555_000094 | Ga0500555_000094_11799_14525 | 906 |
| 127 | 3300053104 | Ga0500556_0000535 | Ga0500556_0000535_14876_17602 | 906 |
| 128 | 3300053130 | Ga0500642_0000955 | Ga0500642_0000955_4131_6857 | 906 |
| 129 | 3300031344 | Ga0265316_10016872 | Ga0265316_100168723 | 907 |
| 130 | 3300039437 | Ga0436365_0912825 | Ga0436365_0912825_90573_93305 | 907 |
| 131 | 3300048928 | Ga0496125_0000017 | Ga0496125_0000017_186212_188992 | 907 |
| 132 | 3300044712 | Ga0453684_0001244 | Ga0453684_0001244_61957_64758 | 910 |
| 133 | 3300046522 | Ga0495643_0000191 | Ga0495643_0000191_5880_8666 | 910 |
| 134 | 3300005327 | Ga0070658_10010619 | Ga0070658_100106195 | 911 |
| 135 | 3300009545 | Ga0105237_10016884 | Ga0105237_100168845 | 911 |
| 136 | 3300053153 | Ga0500616_0003832 | Ga0500616_0003832_3597_6446 | 911 |
| 137 | 3300003320 | rootH2_10000533 | rootH2_1000053346 | 912 |
| 138 | 3300005843 | Ga0068860_100000347 | Ga0068860_10000034746 | 912 |
| 139 | 3300028381 | Ga0268264_10001780 | Ga0268264_100017805 | 912 |
| 140 | 3300049570 | Ga0501033_0000056 | Ga0501033_0000056_25244_28042 | 912 |
| 141 | 3300049574 | Ga0501038_0001271 | Ga0501038_0001271_14245_17043 | 912 |
| 142 | 3300003320 | rootH2_10095611 | rootH2_100956111 | 913 |
| 143 | 3300053104 | Ga0500556_0003080 | Ga0500556_0003080_265_3039 | 914 |
| 144 | 3300003320 | rootH2_10062715 | rootH2_100627152 | 915 |
| 145 | 3300006048 | Ga0075363_100018468 | Ga0075363_1000184683 | 915 |
| 146 | 3300006177 | Ga0075362_10000274 | Ga0075362_100002745 | 915 |
| 147 | 3300031548 | Ga0307408_100005521 | Ga0307408_1000055218 | 917 |
| 148 | 3300031901 | Ga0307406_10010338 | Ga0307406_100103383 | 917 |
| 149 | 3300031995 | Ga0307409_100000685 | Ga0307409_1000006856 | 917 |
| 150 | 3300032004 | Ga0307414_10000044 | Ga0307414_1000004475 | 917 |
| 151 | 3300032004 | Ga0307414_10001584 | Ga0307414_100015849 | 917 |
| 152 | 3300053136 | Ga0500559_0002532 | Ga0500559_0002532_4930_7683 | 917 |
| 153 | 3300005289 | Ga0065704_10087356 | Ga0065704_100873562 | 921 |
| 154 | 3300005327 | Ga0070658_10004960 | Ga0070658_100049607 | 921 |
| 155 | 3300013100 | Ga0157373_10000438 | Ga0157373_1000043824 | 921 |
| 156 | 3300013104 | Ga0157370_10006773 | Ga0157370_1000677310 | 921 |
| 157 | 3300025909 | Ga0207705_10005153 | Ga0207705_100051534 | 921 |
| 158 | 3300001977 | JGI24746J21847_1000253 | JGI24746J21847_10002532 | 923 |
| 159 | 3300005344 | Ga0070661_100001136 | Ga0070661_10000113617 | 923 |
| 160 | 3300005459 | Ga0068867_100000336 | Ga0068867_10000033618 | 923 |
| 161 | 3300005564 | Ga0070664_100010961 | Ga0070664_1000109614 | 923 |
| 162 | 3300009148 | Ga0105243_10000751 | Ga0105243_1000075120 | 923 |
| 163 | 3300025920 | Ga0207649_10003093 | Ga0207649_1000309310 | 923 |
| 164 | 3300025935 | Ga0207709_10000613 | Ga0207709_1000061318 | 923 |
| 165 | 3300025945 | Ga0207679_10013968 | Ga0207679_100139683 | 923 |
| 166 | 3300026089 | Ga0207648_10002337 | Ga0207648_1000233718 | 923 |
| 167 | 3300031251 | Ga0265327_10000969 | Ga0265327_1000096919 | 923 |
| 168 | 3300031548 | Ga0307408_100000035 | Ga0307408_10000003525 | 923 |
| 169 | 3300031903 | Ga0307407_10000064 | Ga0307407_100000648 | 923 |
| 170 | 3300031911 | Ga0307412_10000057 | Ga0307412_1000005777 | 923 |
| 171 | 3300032005 | Ga0307411_10005712 | Ga0307411_100057124 | 923 |
| 172 | 3300041408 | Ga0439453_0000364 | Ga0439453_0000364_1891_4662 | 923 |
| 173 | 3300042127 | Ga0450890_000015 | Ga0450890_000015_38708_41479 | 923 |
| 174 | 3300042130 | Ga0450892_000106 | Ga0450892_000106_2631_5402 | 923 |
| 175 | 3300042144 | Ga0450889_000457 | Ga0450889_000457_568_3339 | 923 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1fiy-assembly1.cif.gz_A | three-dimensional structure of phosphoenolpyruvate carboxylase from escherichia coli at 2.8 a resolution | 0.86 | 19 | 923 |
| 1fiy-assembly1.cif.gz_A | three-dimensional structure of phosphoenolpyruvate carboxylase from escherichia coli at 2.8 a resolution | 0.8582 | 19 | 923 |
| 5vyj-assembly1.cif.gz_A | crystal structure of the photosynthetic phosphoenolpyruvate carboxylase isoenzyme from maize in complex with gly | 0.857 | 22 | 923 |
| 5vyj-assembly1.cif.gz_D | crystal structure of the photosynthetic phosphoenolpyruvate carboxylase isoenzyme from maize in complex with gly | 0.8512 | 22 | 923 |
| 5vyj-assembly1.cif.gz_C | crystal structure of the photosynthetic phosphoenolpyruvate carboxylase isoenzyme from maize in complex with gly | 0.8427 | 14 | 923 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q8ILJ7_329_475_1.20.1440.90 | Mainly Alpha;Up-down Bundle;de novo design (two linked rop proteins);Phosphoenolpyruvate/pyruvate domain | 0.769 | 278 | 396 | 1.20.1440.90 |
| af_Q54JZ3_289_431_1.20.1440.90 | Mainly Alpha;Up-down Bundle;de novo design (two linked rop proteins);Phosphoenolpyruvate/pyruvate domain | 0.7348 | 278 | 398 | 1.20.1440.90 |
| af_Q8ILJ7_329_475_1.20.1440.90 | Mainly Alpha;Up-down Bundle;de novo design (two linked rop proteins);Phosphoenolpyruvate/pyruvate domain | 0.6285 | 278 | 396 | 1.20.1440.90 |
| af_Q54JZ3_289_431_1.20.1440.90 | Mainly Alpha;Up-down Bundle;de novo design (two linked rop proteins);Phosphoenolpyruvate/pyruvate domain | 0.6234 | 278 | 398 | 1.20.1440.90 |
| af_I1NG47_99_429_3.20.20.60 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains | 0.5746 | 471 | 662 | 3.20.20.60 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3C1ASZ1-F1-model_v4 | deleted | 0.9833 | 716 | 923 |
|
| AF-A0A4Q2YWS4-F1-model_v4 | Phosphoenolpyruvate carboxylase | 0.982 | 11 | 607 |
GO:0005829
GO:0006099 GO:0008964 GO:0015977 |
| AF-A0A4Q2YWS4-F1-model_v4 | Phosphoenolpyruvate carboxylase | 0.9771 | 11 | 607 |
GO:0005829
GO:0006099 GO:0008964 GO:0015977 |
| AF-A0A2E0V3V4-F1-model_v4 | Phosphoenolpyruvate carboxylase | 0.9762 | 568 | 923 |
GO:0005829
GO:0006099 GO:0008964 GO:0015977 |
| AF-A0A3C1ASZ1-F1-model_v4 | deleted | 0.974 | 716 | 923 |
|
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar