F266587

General Info

Members Datasets Scaffolds Average Seq Length
175 137 350 603

Family's Representative Sequence

Representative Sequence 3300031344|Ga0265316_10005396|Ga0265316_100053964
Length 644
Sequence MRGRRRRRKVPSEMPGIVGLITRRPREWAEPRLRRMVSSLCHESFYSSGCWISAPQGVYVGWIARQGSFSDGMPVREKAGGAVIVFSGEDFSEQDTVKALGGAWRVSESSPASYLMGLYRQSSSFPEELNGKFHGIVADCERGTATIFNDRFGMHRLHYYQSADAFFFAAESKALLAVCPELRKIDLQGLGEFVSCGSVLEGRTLFSNVSVLPPASAWSFRNGLLASKRIYFHPGQWEDQVPLAPEAYYQELRAVFVRNLPRYFKGPEPIGMSLTGGLDTRMILACRKPDPGTLPCYTFGSMFRENQDVRVARRVADACGQSFQILTAGQEFLSDFPRYAERAVYLTDGYIGVTHAPDLYLNERARAIAPVRMSGVYGGEILRAVRAFKPIEPASGLFTPDFLAHVHGAAETFNQIANPNPVSFTAFQQAPWCLYGVQALEQTQVTMRSPFLDNDFVRTAFRAPRFDSRAGDVSLRLVADGDRSLSRIPTDRGLMGNRGVVMSAASRALREFSFKTEYAYDMGMPQWLARLDHAFLPFHFERLFLGRHKPFHFRVWYRDALANSVRDMLLDSRSLSRPYIDRKGLESIVEGHLRGDRNYTNEIHKVMTLELVHRLFIDHHAEDEGTPITNKCHAETESGLSQLR

Samples

Sample ID Description Type Environment
1 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
68 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
71 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
102 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
103 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
104 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
105 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
106 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
107 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
113 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
114 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
117 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
118 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
119 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
120 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
135 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.57
Nodule 0
Rhizoplane 1.71
Rhizosphere 91.43
Stem 0
Stem Tuber 0
Unclassified 9.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265316_10005396 3300031344 Bacteria 12432
2 LJNas_1001085 3300000546 Bacteria 4227
3 rootH2_10288236 3300003320 Bacteria 4705
4 Ga0055535_1000354 3300003761 Bacteria 44861
5 Ga0055529_1000527 3300003763 Bacteria 33039
6 Ga0070658_10040822 3300005327 Archaea 3744
7 Ga0070683_100000165 3300005329 Bacteria 43737
8 Ga0070683_100034251 3300005329 Unclassified 4638
9 Ga0070683_100116260 3300005329 Unclassified 2525
10 Ga0070670_100011562 3300005331 Bacteria 7546
11 Ga0070666_10017234 3300005335 Bacteria 4629
12 Ga0068868_100000907 3300005338 Bacteria 20145
13 Ga0070675_100012829 3300005354 Bacteria 6575
14 Ga0070675_100039936 3300005354 Unclassified 3830
15 Ga0070671_100105499 3300005355 Bacteria 2365
16 Ga0070667_100001610 3300005367 Bacteria 20204
17 Ga0070714_100108456 3300005435 Bacteria 2455
18 Ga0070713_100010675 3300005436 Bacteria 6649
19 Ga0070713_100019847 3300005436 Bacteria 5145
20 Ga0070701_10001995 3300005438 Bacteria 7738
21 Ga0068867_100003877 3300005459 Bacteria 10526
22 Ga0070706_100019338 3300005467 Bacteria 6282
23 Ga0070707_100001717 3300005468 Bacteria 21122
24 Ga0070698_100055913 3300005471 Unclassified 3999
25 Ga0070684_100000723 3300005535 Bacteria 22865
26 Ga0070684_100002162 3300005535 Bacteria 14515
27 Ga0070697_100001156 3300005536 Bacteria 19991
28 Ga0070697_100021967 3300005536 Bacteria 5063
29 Ga0070672_100024096 3300005543 Unclassified 4492
30 Ga0070686_100003294 3300005544 Bacteria 8841
31 Ga0070665_100012064 3300005548 Bacteria 8718
32 Ga0068855_100000682 3300005563 Bacteria 41517
33 Ga0068857_100000209 3300005577 Bacteria 38288
34 Ga0068857_100000455 3300005577 Bacteria 29204
35 Ga0068856_100001500 3300005614 Bacteria 24431
36 Ga0068856_100012632 3300005614 Bacteria 8176
37 Ga0068856_100083140 3300005614 Unclassified 3179
38 Ga0068852_100000009 3300005616 Bacteria 149600
39 Ga0068859_100001114 3300005617 Bacteria 27429
40 Ga0068864_100052786 3300005618 Bacteria 3505
41 Ga0068851_10028726 3300005834 Bacteria 2748
42 Ga0068863_100001301 3300005841 Bacteria 24904
43 Ga0068863_100003512 3300005841 Bacteria 15469
44 Ga0068860_100008994 3300005843 Bacteria 9946
45 Ga0081540_1004014 3300005983 Bacteria 11394
46 Ga0097621_100001006 3300006237 Bacteria 19840
47 Ga0097621_100002097 3300006237 Bacteria 13662
48 Ga0068871_100000778 3300006358 Bacteria 21454
49 Ga0068871_100000933 3300006358 Bacteria 19508
50 Ga0075434_100007584 3300006871 Bacteria 10046
51 Ga0068865_100000235 3300006881 Bacteria 30781
52 Ga0097620_100001114 3300006931 Bacteria 27429
53 Ga0075435_100016922 3300007076 Bacteria 5506
54 Ga0075435_100069437 3300007076 Bacteria 2873
55 Ga0099794_10000208 3300007265 Bacteria 21186
56 Ga0105240_10000148 3300009093 Bacteria 142265
57 Ga0105240_10000566 3300009093 Bacteria 68552
58 Ga0105245_10001898 3300009098 Bacteria 18994
59 Ga0105247_10000580 3300009101 Bacteria 29713
60 Ga0114129_10064484 3300009147 Bacteria 5113
61 Ga0105243_10004110 3300009148 Bacteria 11568
62 Ga0105243_10018154 3300009148 Bacteria 5324
63 Ga0105241_10000183 3300009174 Bacteria 46939
64 Ga0105242_10004061 3300009176 Bacteria 11374
65 Ga0105248_10054487 3300009177 Bacteria 4484
66 Ga0105237_10000792 3300009545 Bacteria 43244
67 Ga0105238_10000138 3300009551 Bacteria 80733
68 Ga0105238_10176357 3300009551 Bacteria 2114
69 Ga0105249_10158168 3300009553 Bacteria 2187
70 Ga0099796_10018213 3300010159 Bacteria 2105
71 Ga0105239_10078275 3300010375 Bacteria 3639
72 Ga0105246_10001943 3300011119 Bacteria 12471
73 Ga0157370_10000059 3300013104 Bacteria 116740
74 Ga0157369_10000035 3300013105 Bacteria 191300
75 Ga0157369_10065516 3300013105 Bacteria 3910
76 Ga0157374_10000734 3300013296 Bacteria 28624
77 Ga0157374_10004014 3300013296 Bacteria 12373
78 Ga0157378_10000821 3300013297 Bacteria 28926
79 Ga0157378_10001011 3300013297 Bacteria 25732
80 Ga0157372_10000049 3300013307 Bacteria 142350
81 Ga0157375_10000865 3300013308 Bacteria 26369
82 Ga0163163_10002036 3300014325 Bacteria 17086
83 Ga0157377_10000082 3300014745 Bacteria 74078
84 Ga0157379_10000283 3300014968 Bacteria 40188
85 Ga0157379_10096249 3300014968 Bacteria 2657
86 Ga0157376_10000185 3300014969 Bacteria 43045
87 Ga0157376_10008860 3300014969 Bacteria 7280
88 Ga0157376_10019832 3300014969 Bacteria 5190
89 Ga0157376_10082067 3300014969 Bacteria 2769
90 Ga0213873_10003706 3300021358 Bacteria 2782
91 Ga0209258_100370 3300025242 Bacteria 59033
92 Ga0209148_1004197 3300025254 Bacteria 3616
93 Ga0209759_1000491 3300025256 Bacteria 43623
94 Ga0209455_1000209 3300025272 Bacteria 83106
95 Ga0209051_1001249 3300025303 Bacteria 22749
96 Ga0207697_10001766 3300025315 Bacteria 11606
97 Ga0207710_10012597 3300025900 Bacteria 3558
98 Ga0207699_10020697 3300025906 Bacteria 3531
99 Ga0207705_10064030 3300025909 Bacteria 2657
100 Ga0207684_10059411 3300025910 Unclassified 3247
101 Ga0207654_10060145 3300025911 Bacteria 2218
102 Ga0207695_10000105 3300025913 Bacteria 254764
103 Ga0207695_10000491 3300025913 Bacteria 84480
104 Ga0207695_10002183 3300025913 Bacteria 29553
105 Ga0207671_10000162 3300025914 Bacteria 103793
106 Ga0207663_10075712 3300025916 Unclassified 2185
107 Ga0207646_10000612 3300025922 Bacteria 46474
108 Ga0207694_10001734 3300025924 Bacteria 18280
109 Ga0207650_10011726 3300025925 Bacteria 6042
110 Ga0207687_10005233 3300025927 Bacteria 8601
111 Ga0207709_10005120 3300025935 Bacteria 7482
112 Ga0207709_10017848 3300025935 Bacteria 3967
113 Ga0207691_10059185 3300025940 Unclassified 3484
114 Ga0207711_10051882 3300025941 Bacteria 3514
115 Ga0207689_10000786 3300025942 Bacteria 30447
116 Ga0207661_10017421 3300025944 Bacteria 5317
117 Ga0207661_10023653 3300025944 Unclassified 4645
118 Ga0207661_10040261 3300025944 Bacteria 3672
119 Ga0207679_10058333 3300025945 Archaea 2860
120 Ga0207679_10072806 3300025945 Bacteria 2597
121 Ga0207667_10000317 3300025949 Bacteria 67128
122 Ga0207641_10001369 3300026088 Bacteria 24139
123 Ga0207641_10039204 3300026088 Bacteria 3961
124 Ga0207648_10008121 3300026089 Bacteria 10210
125 Ga0207676_10065028 3300026095 Bacteria 2903
126 Ga0207674_10001194 3300026116 Bacteria 33792
127 Ga0207698_10000020 3300026142 Bacteria 139630
128 Ga0207698_10039950 3300026142 Unclassified 3480
129 Ga0209588_1001385 3300027671 Bacteria 6315
130 Ga0268266_10020495 3300028379 Bacteria 5635
131 Ga0268264_10003230 3300028381 Bacteria 14112
132 Ga0265338_10001095 3300028800 Bacteria 45064
133 Ga0265338_10001378 3300028800 Bacteria 39544
134 Ga0265338_10003636 3300028800 Bacteria 21483
135 Ga0265324_10008334 3300029957 Unclassified 4125
136 Ga0265325_10044149 3300031241 Bacteria 2323
137 Ga0265339_10003803 3300031249 Bacteria 10493
138 Ga0265339_10048255 3300031249 Bacteria 2335
139 Ga0265316_10047203 3300031344 Bacteria 3408
140 Ga0265313_10001967 3300031595 Bacteria 18576
141 Ga0265314_10063984 3300031711 Bacteria 2493
142 Ga0307516_10001660 3300031730 Bacteria 30622
143 Ga0395900_0001362 3300037418 Bacteria 29421
144 Ga0395898_0002310 3300037466 Bacteria 22841
145 Ga0395905_0004491 3300037471 Bacteria 14472
146 Ga0395901_0002431 3300038443 Bacteria 18897
147 Ga0436361_0656360 3300039447 Unclassified 3759
148 Ga0436361_0657868 3300039447 Bacteria 10770
149 Ga0436363_0639800 3300039450 Bacteria 8795
150 Ga0436362_1151046 3300039453 Bacteria 6146
151 Ga0466967_0062449 3300045976 Bacteria 3307
152 Ga0495592_0034514 3300046454 Bacteria 3813
153 Ga0495659_0010570 3300046664 Bacteria 2966
154 Ga0495599_0076459 3300046678 Bacteria 2091
155 Ga0495669_0028700 3300046684 Bacteria 2438
156 Ga0495613_0042192 3300046689 Bacteria 3377
157 Ga0496100_0067271 3300048903 Unclassified 2379
158 Ga0496107_0018074 3300048910 Bacteria 4960
159 Ga0496114_0058096 3300048917 Bacteria 3230
160 Ga0501031_0000461 3300049568 Bacteria 23567
161 Ga0501033_0002427 3300049570 Bacteria 15850
162 Ga0501048_0027716 3300049582 Bacteria 4114
163 Ga0501071_0002671 3300049587 Bacteria 10916
164 Ga0501076_0005800 3300049592 Bacteria 8910
165 Ga0501035_0022485 3300049822 Bacteria 5791
166 Ga0501044_0000063 3300049823 Bacteria 131090
167 nmdc:mga05p37_160080_c1 3300050507 Bacteria 2750
168 nmdc:mga05p37_50568_c1 3300050507 Bacteria 5111
169 nmdc:mga0n895_767_c1 3300050512 Bacteria 22787
170 nmdc:mga0rr50_160300_c1 3300050513 Unclassified 1825
171 nmdc:mga0rr50_2520_c2 3300050513 Bacteria 7926
172 Ga0500559_0003068 3300053136 Bacteria 8343
173 Ga0500568_0005138 3300053139 Bacteria 6829
174 Ga0501084_0073016 3300054114 Unclassified 2873
175 Ga0590071_002039 3300059421 Bacteria 5163
176 Ga0265316_10005396
177 LJNas_1001085
178 rootH2_10288236
179 Ga0055535_1000354
180 Ga0055529_1000527
181 Ga0070658_10040822
182 Ga0070683_100000165
183 Ga0070683_100034251
184 Ga0070683_100116260
185 Ga0070670_100011562
186 Ga0070666_10017234
187 Ga0068868_100000907
188 Ga0070675_100012829
189 Ga0070675_100039936
190 Ga0070671_100105499
191 Ga0070667_100001610
192 Ga0070714_100108456
193 Ga0070713_100010675
194 Ga0070713_100019847
195 Ga0070701_10001995
196 Ga0068867_100003877
197 Ga0070706_100019338
198 Ga0070707_100001717
199 Ga0070698_100055913
200 Ga0070684_100000723
201 Ga0070684_100002162
202 Ga0070697_100001156
203 Ga0070697_100021967
204 Ga0070672_100024096
205 Ga0070686_100003294
206 Ga0070665_100012064
207 Ga0068855_100000682
208 Ga0068857_100000209
209 Ga0068857_100000455
210 Ga0068856_100001500
211 Ga0068856_100012632
212 Ga0068856_100083140
213 Ga0068852_100000009
214 Ga0068859_100001114
215 Ga0068864_100052786
216 Ga0068851_10028726
217 Ga0068863_100001301
218 Ga0068863_100003512
219 Ga0068860_100008994
220 Ga0081540_1004014
221 Ga0097621_100001006
222 Ga0097621_100002097
223 Ga0068871_100000778
224 Ga0068871_100000933
225 Ga0075434_100007584
226 Ga0068865_100000235
227 Ga0097620_100001114
228 Ga0075435_100016922
229 Ga0075435_100069437
230 Ga0099794_10000208
231 Ga0105240_10000148
232 Ga0105240_10000566
233 Ga0105245_10001898
234 Ga0105247_10000580
235 Ga0114129_10064484
236 Ga0105243_10004110
237 Ga0105243_10018154
238 Ga0105241_10000183
239 Ga0105242_10004061
240 Ga0105248_10054487
241 Ga0105237_10000792
242 Ga0105238_10000138
243 Ga0105238_10176357
244 Ga0105249_10158168
245 Ga0099796_10018213
246 Ga0105239_10078275
247 Ga0105246_10001943
248 Ga0157370_10000059
249 Ga0157369_10000035
250 Ga0157369_10065516
251 Ga0157374_10000734
252 Ga0157374_10004014
253 Ga0157378_10000821
254 Ga0157378_10001011
255 Ga0157372_10000049
256 Ga0157375_10000865
257 Ga0163163_10002036
258 Ga0157377_10000082
259 Ga0157379_10000283
260 Ga0157379_10096249
261 Ga0157376_10000185
262 Ga0157376_10008860
263 Ga0157376_10019832
264 Ga0157376_10082067
265 Ga0213873_10003706
266 Ga0209258_100370
267 Ga0209148_1004197
268 Ga0209759_1000491
269 Ga0209455_1000209
270 Ga0209051_1001249
271 Ga0207697_10001766
272 Ga0207710_10012597
273 Ga0207699_10020697
274 Ga0207705_10064030
275 Ga0207684_10059411
276 Ga0207654_10060145
277 Ga0207695_10000105
278 Ga0207695_10000491
279 Ga0207695_10002183
280 Ga0207671_10000162
281 Ga0207663_10075712
282 Ga0207646_10000612
283 Ga0207694_10001734
284 Ga0207650_10011726
285 Ga0207687_10005233
286 Ga0207709_10005120
287 Ga0207709_10017848
288 Ga0207691_10059185
289 Ga0207711_10051882
290 Ga0207689_10000786
291 Ga0207661_10017421
292 Ga0207661_10023653
293 Ga0207661_10040261
294 Ga0207679_10058333
295 Ga0207679_10072806
296 Ga0207667_10000317
297 Ga0207641_10001369
298 Ga0207641_10039204
299 Ga0207648_10008121
300 Ga0207676_10065028
301 Ga0207674_10001194
302 Ga0207698_10000020
303 Ga0207698_10039950
304 Ga0209588_1001385
305 Ga0268266_10020495
306 Ga0268264_10003230
307 Ga0265338_10001095
308 Ga0265338_10001378
309 Ga0265338_10003636
310 Ga0265324_10008334
311 Ga0265325_10044149
312 Ga0265339_10003803
313 Ga0265339_10048255
314 Ga0265316_10047203
315 Ga0265313_10001967
316 Ga0265314_10063984
317 Ga0307516_10001660
318 Ga0395900_0001362
319 Ga0395898_0002310
320 Ga0395905_0004491
321 Ga0395901_0002431
322 Ga0436361_0656360
323 Ga0436361_0657868
324 Ga0436363_0639800
325 Ga0436362_1151046
326 Ga0466967_0062449
327 Ga0495592_0034514
328 Ga0495659_0010570
329 Ga0495599_0076459
330 Ga0495669_0028700
331 Ga0495613_0042192
332 Ga0496100_0067271
333 Ga0496107_0018074
334 Ga0496114_0058096
335 Ga0501031_0000461
336 Ga0501033_0002427
337 Ga0501048_0027716
338 Ga0501071_0002671
339 Ga0501076_0005800
340 Ga0501035_0022485
341 Ga0501044_0000063
342 nmdc:mga05p37_160080_c1
343 nmdc:mga05p37_50568_c1
344 nmdc:mga0n895_767_c1
345 nmdc:mga0rr50_160300_c1
346 nmdc:mga0rr50_2520_c2
347 Ga0500559_0003068
348 Ga0500568_0005138
349 Ga0501084_0073016
350 Ga0590071_002039

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13537

GATase_7

Glutamine amidotransferase domain

64

177

0.93

PF00733

Asn_synthase

Asparagine synthase

251

405

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ylz-assembly1.cif.gz_A unliganded form of hydroxyamidotransferase tsnb9 0.7475 3 598
7ylz-assembly1.cif.gz_A unliganded form of hydroxyamidotransferase tsnb9 0.7367 3 598
7ylz-assembly2.cif.gz_B unliganded form of hydroxyamidotransferase tsnb9 0.7354 3 597
7ylz-assembly2.cif.gz_B unliganded form of hydroxyamidotransferase tsnb9 0.7237 3 597
1ct9-assembly2.cif.gz_C crystal structure of asparagine synthetase b from escherichia coli 0.7027 4 508
ID Description Score Start End Superfamily
af_Q21463_4_196_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.787 5 220 3.60.20.10
af_P9WN33_15_198_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.7814 11 165 3.60.20.10
af_Q21463_4_196_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.7798 5 220 3.60.20.10
af_Q86A01_14_228_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.7725 18 208 3.60.20.10
af_P49090_1_193_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.7546 1 220 3.60.20.10
ID Description Score Start End GO Terms
AF-A0A2V5UCQ2-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9588 29 300
AF-A0A318CRY8-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9521 1 601 GO:0004066
GO:0005524
GO:0006529
AF-A0A318CRY8-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9505 1 601 GO:0004066
GO:0005524
GO:0006529
AF-A0A2V8ZNY2-F1-model_v4 Asparagine synthetase domain-containing protein 0.9456 363 601
AF-A0A2V5UCQ2-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9453 29 300

Map