F265974

General Info

Members Datasets Scaffolds Average Seq Length
175 116 175 318

Family's Representative Sequence

Representative Sequence 3300005539|Ga0068853_100461521|Ga0068853_1004615211
Length 357
Sequence MSVELPARLGAAIARELEGVSRKGLAERAQRTSQAYRAGRGSAGVIRDGADALAYALTRLPATYAACLRVLQEARRRAPGFTPASLLDAGSGTGAASWAALEAWPDLGRIEWLDSNPSFLAFAAALAAGGPQPLATADQRCGDLTAGGFPTADLVIASYALAEIAPERQATVAGDLWGAASGLLALVEPGTPAGFARLRAAREGLVAAGASILAPCPHENACPLVGEDWCHFSVRLPRSRDHRIAKAAEVPFEDERYAYLIAARPGVAHTPSAARILAPPRSGKPGIDLKLCTPAGLEARFVPRRDKPAYALARRLGWGDGVESSASGDKPPLTLSSARSSQPCPPGTSRERRVRDP

Samples

Sample ID Description Type Environment
1 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
2 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
69 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
70 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
77 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
78 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
90 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
91 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
92 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
93 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
94 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
95 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
96 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
97 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
98 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
99 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
107 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
108 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
110 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
111 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
112 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
113 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
114 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
115 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
116 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.71
Nodule 0
Rhizoplane 5.14
Rhizosphere 82.86
Stem 0
Stem Tuber 0
Unclassified 6.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055531_10025547 3300003794 Bacteria 2140
2 Ga0065165_1022443 3300005262 Bacteria 2163
3 Ga0070658_10082903 3300005327 Bacteria 2635
4 Ga0070670_100000004 3300005331 Bacteria 392110
5 Ga0070666_10070203 3300005335 Bacteria 2383
6 Ga0070660_100047115 3300005339 Bacteria 3306
7 Ga0070660_100090231 3300005339 Bacteria 2416
8 Ga0070691_10019343 3300005341 Bacteria 3142
9 Ga0070668_100000492 3300005347 Bacteria 26128
10 Ga0070668_100002126 3300005347 Bacteria 14486
11 Ga0070671_100007081 3300005355 Bacteria 8980
12 Ga0070659_100000609 3300005366 Bacteria 26247
13 Ga0070659_100263136 3300005366 Bacteria 1431
14 Ga0070667_100000115 3300005367 Bacteria 102912
15 Ga0070663_100064426 3300005455 Bacteria 2649
16 Ga0070662_100310104 3300005457 Bacteria 1284
17 Ga0070681_10052003 3300005458 Bacteria 4085
18 Ga0070679_100002959 3300005530 Bacteria 15488
19 Ga0070679_100024803 3300005530 Bacteria 5878
20 Ga0068853_100016324 3300005539 Bacteria 6109
21 Ga0068853_100461521 3300005539 Bacteria 1195
22 Ga0070665_100000187 3300005548 Bacteria 110095
23 Ga0070665_100000424 3300005548 Bacteria 61687
24 Ga0070665_100000886 3300005548 Bacteria 38378
25 Ga0068855_100040234 3300005563 Bacteria 5549
26 Ga0068855_100115594 3300005563 Bacteria 3076
27 Ga0068855_100245452 3300005563 Bacteria 1999
28 Ga0070664_100096385 3300005564 Bacteria 2567
29 Ga0070664_100264262 3300005564 Bacteria 1549
30 Ga0068856_100042466 3300005614 Bacteria 4473
31 Ga0068859_100099272 3300005617 Bacteria 2967
32 Ga0068864_100000058 3300005618 Bacteria 125688
33 Ga0068864_100000105 3300005618 Bacteria 81450
34 Ga0068864_100156473 3300005618 Bacteria 2069
35 Ga0068863_100000657 3300005841 Bacteria 34952
36 Ga0068863_100004859 3300005841 Bacteria 13242
37 Ga0068863_100022077 3300005841 Bacteria 6078
38 Ga0068863_100118350 3300005841 Bacteria 2525
39 Ga0068863_100528638 3300005841 Unclassified 1163
40 Ga0068858_100000006 3300005842 Bacteria 256011
41 Ga0068858_100030916 3300005842 Bacteria 4972
42 Ga0068860_100000178 3300005843 Bacteria 103268
43 Ga0068862_100013905 3300005844 Bacteria 6671
44 Ga0068862_100016862 3300005844 Bacteria 6079
45 Ga0070712_100133084 3300006175 Bacteria 1887
46 Ga0070712_100262712 3300006175 Bacteria 1384
47 Ga0097621_100103663 3300006237 Bacteria 2396
48 Ga0068865_100003112 3300006881 Bacteria 9923
49 Ga0097620_100099272 3300006931 Bacteria 2967
50 Ga0105240_10009275 3300009093 Bacteria 13956
51 Ga0105240_10049218 3300009093 Bacteria 5321
52 Ga0105240_10228243 3300009093 Bacteria 2165
53 Ga0105248_10000384 3300009177 Bacteria 50926
54 Ga0105248_10009099 3300009177 Bacteria 10925
55 Ga0105237_10042478 3300009545 Bacteria 4584
56 Ga0105238_10078887 3300009551 Bacteria 3283
57 Ga0105238_10230316 3300009551 Bacteria 1830
58 Ga0105238_10629304 3300009551 Bacteria 1082
59 Ga0105249_10014043 3300009553 Bacteria 7081
60 Ga0105249_10317450 3300009553 Unclassified 1568
61 Ga0105239_10154370 3300010375 Bacteria 2563
62 Ga0163162_10095853 3300013306 Bacteria 3055
63 Ga0157375_10427723 3300013308 Bacteria 1490
64 Ga0163163_10029289 3300014325 Bacteria 5296
65 Ga0163163_10372001 3300014325 Bacteria 1486
66 Ga0213876_10020593 3300021384 Bacteria 3486
67 Ga0213876_10051772 3300021384 Bacteria 2170
68 Ga0209257_1005403 3300025304 Bacteria 8991
69 Ga0207642_10039028 3300025899 Bacteria 2059
70 Ga0207705_10006250 3300025909 Bacteria 8849
71 Ga0207695_10002044 3300025913 Bacteria 30934
72 Ga0207695_10004129 3300025913 Bacteria 19944
73 Ga0207695_10037498 3300025913 Bacteria 5230
74 Ga0207695_10277212 3300025913 Bacteria 1571
75 Ga0207660_10002977 3300025917 Bacteria 11087
76 Ga0207657_10000372 3300025919 Bacteria 47410
77 Ga0207657_10041140 3300025919 Bacteria 4088
78 Ga0207652_10006465 3300025921 Bacteria 9451
79 Ga0207694_10034941 3300025924 Bacteria 3854
80 Ga0207694_10039342 3300025924 Bacteria 3639
81 Ga0207650_10000226 3300025925 Bacteria 63422
82 Ga0207650_10257676 3300025925 Bacteria 1414
83 Ga0207644_10016769 3300025931 Bacteria 4933
84 Ga0207690_10000154 3300025932 Bacteria 54359
85 Ga0207706_10225538 3300025933 Bacteria 1640
86 Ga0207704_10005646 3300025938 Bacteria 5778
87 Ga0207711_10000691 3300025941 Bacteria 33231
88 Ga0207711_10022522 3300025941 Bacteria 5269
89 Ga0207679_10172172 3300025945 Bacteria 1783
90 Ga0207667_10044194 3300025949 Bacteria 4722
91 Ga0207667_10062750 3300025949 Bacteria 3884
92 Ga0207712_10001683 3300025961 Bacteria 14844
93 Ga0207668_10000013 3300025972 Bacteria 167989
94 Ga0207668_10000041 3300025972 Bacteria 104351
95 Ga0207658_10000886 3300025986 Bacteria 24913
96 Ga0207658_10025439 3300025986 Bacteria 4145
97 Ga0207703_10000027 3300026035 Bacteria 209608
98 Ga0207703_10004244 3300026035 Bacteria 11795
99 Ga0207703_10114947 3300026035 Bacteria 2302
100 Ga0207639_10031498 3300026041 Bacteria 3898
101 Ga0207641_10000003 3300026088 Bacteria 496984
102 Ga0207641_10006803 3300026088 Bacteria 9577
103 Ga0207641_10142847 3300026088 Bacteria 2162
104 Ga0207641_10474130 3300026088 Unclassified 1212
105 Ga0207676_10000083 3300026095 Bacteria 91138
106 Ga0207676_10000087 3300026095 Bacteria 85293
107 Ga0207676_10031497 3300026095 Bacteria 3990
108 Ga0207676_10097934 3300026095 Bacteria 2424
109 Ga0207683_10314765 3300026121 Bacteria 1433
110 Ga0268266_10000003 3300028379 Bacteria 1701703
111 Ga0268266_10000409 3300028379 Bacteria 65290
112 Ga0268266_10004543 3300028379 Bacteria 13259
113 Ga0268265_10002378 3300028380 Bacteria 14226
114 Ga0268265_10006313 3300028380 Bacteria 8031
115 Ga0268264_10000032 3300028381 Bacteria 408337
116 Ga0265337_1001222 3300028556 Bacteria 13025
117 Ga0265334_10000323 3300028573 Bacteria 26195
118 Ga0307517_10003758 3300028786 Bacteria 23601
119 Ga0265338_10225394 3300028800 Bacteria 1397
120 Ga0265316_10248285 3300031344 Bacteria 1307
121 Ga0307513_10000377 3300031456 Bacteria 64679
122 Ga0307513_10001433 3300031456 Bacteria 34293
123 Ga0265313_10025277 3300031595 Bacteria 3152
124 Ga0265314_10047985 3300031711 Bacteria 3001
125 Ga0265314_10084430 3300031711 Bacteria 2084
126 Ga0307510_10028473 3300033180 Bacteria 6380
127 Ga0373936_0013432 3300035113 Bacteria 3125
128 Ga0373935_0024352 3300035692 Bacteria 3726
129 Ga0373927_0001025 3300035695 Bacteria 21260
130 Ga0373933_0165949 3300035724 Unclassified 1404
131 Ga0373937_0014387 3300036401 Bacteria 6987
132 Ga0373925_0018912 3300037068 Bacteria 5007
133 Ga0395899_0002171 3300037312 Bacteria 16121
134 Ga0395900_0000002 3300037418 Bacteria 671103
135 Ga0395900_0292737 3300037418 Bacteria 1616
136 Ga0395900_0330892 3300037418 Bacteria 1501
137 Ga0395898_0020727 3300037466 Bacteria 6674
138 Ga0395898_0027187 3300037466 Bacteria 5747
139 Ga0395905_0121370 3300037471 Bacteria 2456
140 Ga0436364_1447885 3300037853 Bacteria 2550
141 Ga0395901_0000021 3300038443 Bacteria 307734
142 Ga0395901_0042612 3300038443 Bacteria 4707
143 Ga0436365_0878773 3300039437 Bacteria 1701
144 Ga0436365_1656790 3300039437 Bacteria 2170
145 Ga0495629_0006783 3300046459 Bacteria 8464
146 Ga0495583_0015509 3300046506 Bacteria 4142
147 Ga0495642_0000667 3300046528 Bacteria 17123
148 Ga0495642_0069977 3300046528 Bacteria 1466
149 Ga0495597_0003314 3300046542 Bacteria 9510
150 Ga0495611_0010079 3300046648 Bacteria 3999
151 Ga0495625_0045636 3300046660 Bacteria 3166
152 Ga0495669_0004400 3300046684 Bacteria 5816
153 Ga0495672_0082051 3300047320 Bacteria 1794
154 Ga0495686_0036261 3300047472 Bacteria 3165
155 Ga0495602_0278008 3300048088 Bacteria 1235
156 Ga0496101_0049080 3300048904 Bacteria 3035
157 Ga0496102_0021624 3300048905 Bacteria 5691
158 Ga0496102_0051237 3300048905 Bacteria 3761
159 Ga0496102_0449930 3300048905 Bacteria 1208
160 Ga0496106_0075689 3300048909 Bacteria 2579
161 Ga0496109_0011272 3300048912 Bacteria 7677
162 Ga0496112_0013407 3300048915 Bacteria 7566
163 Ga0496115_0000239 3300048918 Bacteria 49984
164 Ga0496115_0029054 3300048918 Bacteria 4340
165 Ga0496118_0005249 3300048921 Bacteria 14800
166 Ga0496121_0000042 3300048924 Bacteria 342304
167 Ga0501034_0120821 3300049571 Bacteria 2606
168 Ga0501047_0000933 3300049581 Bacteria 29666
169 Ga0500635_0000203 3300053080 Bacteria 29410
170 Ga0500643_009822 3300053087 Bacteria 3621
171 Ga0500595_004920 3300053119 Bacteria 5906
172 Ga0500608_046838 3300053122 Bacteria 2077
173 Ga0500614_003627 3300053123 Bacteria 3313
174 Ga0500625_108887 3300053729 Unclassified 1142
175 Ga0500596_004927 3300053735 Bacteria 2401

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053119 Ga0500595_004920 Ga0500595_004920_18_815 254
2 3300053729 Ga0500625_108887 Ga0500625_108887_322_1119 254
3 3300048905 Ga0496102_0021624 Ga0496102_0021624_4763_5674 264
4 3300005843 Ga0068860_100000178 Ga0068860_10000017884 272
5 3300028381 Ga0268264_10000032 Ga0268264_1000003292 272
6 3300005563 Ga0068855_100040234 Ga0068855_1000402343 284
7 3300025949 Ga0207667_10044194 Ga0207667_100441942 284
8 3300005331 Ga0070670_100000004 Ga0070670_100000004322 286
9 3300005335 Ga0070666_10070203 Ga0070666_100702033 286
10 3300005347 Ga0070668_100000492 Ga0070668_10000049220 286
11 3300005367 Ga0070667_100000115 Ga0070667_10000011559 286
12 3300005548 Ga0070665_100000886 Ga0070665_10000088611 286
13 3300005617 Ga0068859_100099272 Ga0068859_1000992723 286
14 3300005618 Ga0068864_100000105 Ga0068864_10000010557 286
15 3300005841 Ga0068863_100000657 Ga0068863_10000065720 286
16 3300005842 Ga0068858_100030916 Ga0068858_1000309162 286
17 3300005844 Ga0068862_100013905 Ga0068862_1000139052 286
18 3300006175 Ga0070712_100262712 Ga0070712_1002627122 286
19 3300006931 Ga0097620_100099272 Ga0097620_1000992722 286
20 3300009553 Ga0105249_10014043 Ga0105249_100140437 286
21 3300013306 Ga0163162_10095853 Ga0163162_100958532 286
22 3300025925 Ga0207650_10000226 Ga0207650_1000022625 286
23 3300025961 Ga0207712_10001683 Ga0207712_1000168311 286
24 3300025972 Ga0207668_10000041 Ga0207668_1000004126 286
25 3300025986 Ga0207658_10000886 Ga0207658_1000088613 286
26 3300026035 Ga0207703_10004244 Ga0207703_100042445 286
27 3300026088 Ga0207641_10006803 Ga0207641_100068037 286
28 3300026095 Ga0207676_10000083 Ga0207676_1000008353 286
29 3300028379 Ga0268266_10004543 Ga0268266_100045433 286
30 3300028380 Ga0268265_10002378 Ga0268265_100023785 286
31 3300009545 Ga0105237_10042478 Ga0105237_100424783 291
32 3300037418 Ga0395900_0292737 Ga0395900_0292737_187_1167 292
33 3300031456 Ga0307513_10001433 Ga0307513_1000143321 294
34 3300037418 Ga0395900_0330892 Ga0395900_0330892_340_1320 298
35 3300037466 Ga0395898_0027187 Ga0395898_0027187_3963_4934 298
36 3300038443 Ga0395901_0042612 Ga0395901_0042612_3450_4421 298
37 3300009177 Ga0105248_10000384 Ga0105248_1000038413 300
38 3300025913 Ga0207695_10004129 Ga0207695_100041299 300
39 3300035113 Ga0373936_0013432 Ga0373936_0013432_1171_2133 300
40 3300035692 Ga0373935_0024352 Ga0373935_0024352_1345_2322 300
41 3300046684 Ga0495669_0004400 Ga0495669_0004400_243_1217 300
42 3300005341 Ga0070691_10019343 Ga0070691_100193433 301
43 3300021384 Ga0213876_10051772 Ga0213876_100517721 301
44 3300025941 Ga0207711_10000691 Ga0207711_1000069113 301
45 3300039437 Ga0436365_1656790 Ga0436365_1656790_89_1063 301
46 3300005530 Ga0070679_100024803 Ga0070679_1000248033 302
47 3300005618 Ga0068864_100156473 Ga0068864_1001564732 302
48 3300006237 Ga0097621_100103663 Ga0097621_1001036633 302
49 3300009551 Ga0105238_10629304 Ga0105238_106293041 302
50 3300026095 Ga0207676_10097934 Ga0207676_100979342 302
51 3300025899 Ga0207642_10039028 Ga0207642_100390283 303
52 3300025913 Ga0207695_10277212 Ga0207695_102772122 304
53 3300031711 Ga0265314_10084430 Ga0265314_100844302 304
54 3300006175 Ga0070712_100133084 Ga0070712_1001330842 308
55 3300035724 Ga0373933_0165949 Ga0373933_0165949_397_1356 308
56 3300036401 Ga0373937_0014387 Ga0373937_0014387_3574_4533 308
57 3300005347 Ga0070668_100002126 Ga0070668_10000212611 310
58 3300005548 Ga0070665_100000424 Ga0070665_10000042446 310
59 3300005844 Ga0068862_100016862 Ga0068862_1000168623 310
60 3300025972 Ga0207668_10000013 Ga0207668_10000013163 310
61 3300025986 Ga0207658_10025439 Ga0207658_100254392 310
62 3300028379 Ga0268266_10000409 Ga0268266_1000040946 310
63 3300028380 Ga0268265_10006313 Ga0268265_100063137 310
64 3300053087 Ga0500643_009822 Ga0500643_009822_449_1414 310
65 3300005563 Ga0068855_100115594 Ga0068855_1001155942 311
66 3300009551 Ga0105238_10078887 Ga0105238_100788872 311
67 3300025924 Ga0207694_10039342 Ga0207694_100393422 311
68 3300028556 Ga0265337_1001222 Ga0265337_10012224 311
69 3300028573 Ga0265334_10000323 Ga0265334_1000032311 311
70 3300028800 Ga0265338_10225394 Ga0265338_102253942 311
71 3300031344 Ga0265316_10248285 Ga0265316_102482851 311
72 3300031595 Ga0265313_10025277 Ga0265313_100252774 311
73 3300031711 Ga0265314_10047985 Ga0265314_100479852 311
74 3300049581 Ga0501047_0000933 Ga0501047_0000933_24718_25686 311
75 3300005841 Ga0068863_100528638 Ga0068863_1005286382 312
76 3300026088 Ga0207641_10474130 Ga0207641_104741301 312
77 3300005262 Ga0065165_1022443 Ga0065165_10224432 313
78 3300005327 Ga0070658_10082903 Ga0070658_100829033 313
79 3300005339 Ga0070660_100047115 Ga0070660_1000471151 313
80 3300005339 Ga0070660_100090231 Ga0070660_1000902312 313
81 3300005355 Ga0070671_100007081 Ga0070671_1000070813 313
82 3300005366 Ga0070659_100000609 Ga0070659_10000060916 313
83 3300005366 Ga0070659_100263136 Ga0070659_1002631362 313
84 3300005455 Ga0070663_100064426 Ga0070663_1000644263 313
85 3300005457 Ga0070662_100310104 Ga0070662_1003101042 313
86 3300005458 Ga0070681_10052003 Ga0070681_100520032 313
87 3300005530 Ga0070679_100002959 Ga0070679_10000295916 313
88 3300005539 Ga0068853_100016324 Ga0068853_1000163243 313
89 3300005539 Ga0068853_100461521 Ga0068853_1004615211 313
90 3300005548 Ga0070665_100000187 Ga0070665_10000018742 313
91 3300005563 Ga0068855_100245452 Ga0068855_1002454522 313
92 3300005564 Ga0070664_100096385 Ga0070664_1000963852 313
93 3300005564 Ga0070664_100264262 Ga0070664_1002642622 313
94 3300005614 Ga0068856_100042466 Ga0068856_1000424665 313
95 3300005618 Ga0068864_100000058 Ga0068864_10000005850 313
96 3300005841 Ga0068863_100004859 Ga0068863_1000048599 313
97 3300005841 Ga0068863_100022077 Ga0068863_1000220772 313
98 3300005841 Ga0068863_100118350 Ga0068863_1001183502 313
99 3300005842 Ga0068858_100000006 Ga0068858_100000006187 313
100 3300009093 Ga0105240_10009275 Ga0105240_1000927511 313
101 3300009093 Ga0105240_10049218 Ga0105240_100492183 313
102 3300009093 Ga0105240_10228243 Ga0105240_102282432 313
103 3300009177 Ga0105248_10009099 Ga0105248_100090996 313
104 3300009553 Ga0105249_10317450 Ga0105249_103174502 313
105 3300010375 Ga0105239_10154370 Ga0105239_101543702 313
106 3300013308 Ga0157375_10427723 Ga0157375_104277232 313
107 3300014325 Ga0163163_10372001 Ga0163163_103720012 313
108 3300025909 Ga0207705_10006250 Ga0207705_100062507 313
109 3300025913 Ga0207695_10002044 Ga0207695_1000204426 313
110 3300025917 Ga0207660_10002977 Ga0207660_100029773 313
111 3300025919 Ga0207657_10000372 Ga0207657_1000037233 313
112 3300025921 Ga0207652_10006465 Ga0207652_100064653 313
113 3300025924 Ga0207694_10034941 Ga0207694_100349413 313
114 3300025925 Ga0207650_10257676 Ga0207650_102576762 313
115 3300025931 Ga0207644_10016769 Ga0207644_100167693 313
116 3300025932 Ga0207690_10000154 Ga0207690_1000015434 313
117 3300025933 Ga0207706_10225538 Ga0207706_102255382 313
118 3300025941 Ga0207711_10022522 Ga0207711_100225222 313
119 3300025945 Ga0207679_10172172 Ga0207679_101721723 313
120 3300025949 Ga0207667_10062750 Ga0207667_100627502 313
121 3300026035 Ga0207703_10000027 Ga0207703_10000027113 313
122 3300026035 Ga0207703_10114947 Ga0207703_101149472 313
123 3300026041 Ga0207639_10031498 Ga0207639_100314983 313
124 3300026088 Ga0207641_10000003 Ga0207641_10000003260 313
125 3300026088 Ga0207641_10142847 Ga0207641_101428473 313
126 3300026095 Ga0207676_10000087 Ga0207676_1000008715 313
127 3300026095 Ga0207676_10031497 Ga0207676_100314974 313
128 3300026121 Ga0207683_10314765 Ga0207683_103147651 313
129 3300028379 Ga0268266_10000003 Ga0268266_100000031269 313
130 3300028786 Ga0307517_10003758 Ga0307517_100037584 313
131 3300031456 Ga0307513_10000377 Ga0307513_1000037732 313
132 3300033180 Ga0307510_10028473 Ga0307510_100284733 313
133 3300046459 Ga0495629_0006783 Ga0495629_0006783_277_1251 313
134 3300046506 Ga0495583_0015509 Ga0495583_0015509_641_1615 313
135 3300046528 Ga0495642_0000667 Ga0495642_0000667_5007_5981 313
136 3300046528 Ga0495642_0069977 Ga0495642_0069977_31_1005 313
137 3300046542 Ga0495597_0003314 Ga0495597_0003314_3130_4104 313
138 3300046648 Ga0495611_0010079 Ga0495611_0010079_792_1766 313
139 3300046660 Ga0495625_0045636 Ga0495625_0045636_1515_2489 313
140 3300047320 Ga0495672_0082051 Ga0495672_0082051_566_1570 313
141 3300047472 Ga0495686_0036261 Ga0495686_0036261_1642_2613 313
142 3300048088 Ga0495602_0278008 Ga0495602_0278008_140_1114 313
143 3300048904 Ga0496101_0049080 Ga0496101_0049080_1143_2117 313
144 3300048905 Ga0496102_0051237 Ga0496102_0051237_1366_2340 313
145 3300048905 Ga0496102_0449930 Ga0496102_0449930_201_1175 313
146 3300048909 Ga0496106_0075689 Ga0496106_0075689_1303_2280 313
147 3300048912 Ga0496109_0011272 Ga0496109_0011272_3085_4059 313
148 3300048915 Ga0496112_0013407 Ga0496112_0013407_5195_6169 313
149 3300048918 Ga0496115_0000239 Ga0496115_0000239_25358_26332 313
150 3300048918 Ga0496115_0029054 Ga0496115_0029054_553_1527 313
151 3300048921 Ga0496118_0005249 Ga0496118_0005249_563_1537 313
152 3300048924 Ga0496121_0000042 Ga0496121_0000042_58109_59083 313
153 3300049571 Ga0501034_0120821 Ga0501034_0120821_34_1038 313
154 3300053080 Ga0500635_0000203 Ga0500635_0000203_9205_10179 313
155 3300053122 Ga0500608_046838 Ga0500608_046838_617_1591 313
156 3300053123 Ga0500614_003627 Ga0500614_003627_1985_2959 313
157 3300053735 Ga0500596_004927 Ga0500596_004927_1151_2125 313
158 3300003794 Ga0055531_10025547 Ga0055531_100255472 314
159 3300006881 Ga0068865_100003112 Ga0068865_1000031122 314
160 3300009551 Ga0105238_10230316 Ga0105238_102303163 314
161 3300014325 Ga0163163_10029289 Ga0163163_100292893 314
162 3300021384 Ga0213876_10020593 Ga0213876_100205931 314
163 3300025304 Ga0209257_1005403 Ga0209257_10054036 314
164 3300025913 Ga0207695_10037498 Ga0207695_100374984 314
165 3300025919 Ga0207657_10041140 Ga0207657_100411403 314
166 3300025938 Ga0207704_10005646 Ga0207704_100056462 314
167 3300035695 Ga0373927_0001025 Ga0373927_0001025_20096_21076 314
168 3300037068 Ga0373925_0018912 Ga0373925_0018912_192_1172 314
169 3300037312 Ga0395899_0002171 Ga0395899_0002171_308_1282 314
170 3300037418 Ga0395900_0000002 Ga0395900_0000002_170798_171772 314
171 3300037466 Ga0395898_0020727 Ga0395898_0020727_2811_3785 314
172 3300037471 Ga0395905_0121370 Ga0395905_0121370_412_1386 314
173 3300037853 Ga0436364_1447885 Ga0436364_1447885_751_1728 314
174 3300038443 Ga0395901_0000021 Ga0395901_0000021_123133_124107 314
175 3300039437 Ga0436365_0878773 Ga0436365_0878773_139_1116 314

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09243

Rsm22

Mitochondrial small ribosomal subunit Rsm22

49

323

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gu3-assembly1.cif.gz_B crystal structure of the methyltransferase bc_2162 in complex with s-adenosyl-l-homocysteine from bacillus cereus, northeast structural genomics consortium target bcr20 0.812 67 196
6hp2-assembly1.cif.gz_A crystal structure of the o-methyltransferase from the trans-at pks multienzyme c0zgq3 of brevibacillus brevis in complex with s-adenosyl-l-homocysteine 0.8074 83 189
8h3t-assembly1.cif.gz_B the crystal structure of alph 0.8051 83 188
3dp7-assembly1.cif.gz_B crystal structure of sam-dependent methyltransferase from bacteroides vulgatus atcc 8482 0.7924 71 188
1xxl-assembly2.cif.gz_B the crystal structure of ycgj protein from bacillus subitilis at 2.1 a resolution 0.7899 71 189
ID Description Score Start End Superfamily
af_Q9VL60_143_334_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9034 47 207 3.40.50.150
af_D3Z930_164_311_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8977 62 202 3.40.50.150
af_A0A0R4IJY0_140_322_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8962 40 206 3.40.50.150
af_Q54DG6_627_803_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.893 59 207 3.40.50.150
af_Q8GW63_104_291_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.892 52 210 3.40.50.150

Feature Viewer

pLDDT pTM Quality
81.54 0.8 High
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Predicted Structure (AlphaFold2)

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