F264778

General Info

Members Datasets Scaffolds Average Seq Length
174 95 348 273

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10003230|Ga0265338_100032309
Length 313
Sequence MRAESNVALQEKADKNGAGIAISIRAGISNKMKALAQNQGEEAQLLQTIEMFEVIVQSQPSDCQSLEILKEAYSKLGREQDVINTSKRIAQAYMQQGQLSSAILEYETVLQRRPDDADVQAALKQIEDKASNVTIEAAAEPAALAPMSQETRLRKKTHAPEMVEVNDGRQAMHKIFVDSKLISTGDFDLCWRTPDLTVAPADAAEPFIHTLHEKNIFHIEKSLKLLSDKSRTAYMPLDRYDVDIDLTRGFPAEVCRRWGVLPFDRMSKAILVATANPYNQQAAKELAEATSHRLLWYLAAPSEIMSNLRKAFR

Samples

Sample ID Description Type Environment
1 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
21 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
22 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
23 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
34 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
35 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
36 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
37 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
38 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
39 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
40 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
41 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
42 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
43 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
44 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
45 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
46 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
47 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
48 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
49 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
50 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
51 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
52 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
53 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
54 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
55 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
56 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
57 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
58 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
59 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
60 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
61 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
62 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
63 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
64 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
65 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
68 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
74 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
75 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
76 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
77 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
78 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
79 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
80 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
81 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
82 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
83 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
84 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
85 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
86 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
87 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.57
Nodule 0
Rhizoplane 0
Rhizosphere 98.85
Stem 0
Stem Tuber 0
Unclassified 14.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265338_10003230 3300028800 Bacteria 23216
2 rootH1_10320295 3300003323 Bacteria 2390
3 Ga0070683_100164543 3300005329 Bacteria 2104
4 Ga0070690_100235733 3300005330 Unclassified 1288
5 Ga0070689_100081266 3300005340 Bacteria 2544
6 Ga0070689_100530100 3300005340 Unclassified 1012
7 Ga0070691_10102634 3300005341 Bacteria 1422
8 Ga0070714_100010626 3300005435 Bacteria 7284
9 Ga0070711_100018459 3300005439 Bacteria 4455
10 Ga0070679_100211952 3300005530 Unclassified 1901
11 Ga0068853_100219775 3300005539 Bacteria 1735
12 Ga0070686_100002150 3300005544 Bacteria 10869
13 Ga0068855_100052082 3300005563 Bacteria 4820
14 Ga0068855_100078791 3300005563 Bacteria 3822
15 Ga0068855_100116212 3300005563 Bacteria 3066
16 Ga0068856_100000556 3300005614 Bacteria 41006
17 Ga0068856_100038875 3300005614 Bacteria 4671
18 Ga0068856_100078586 3300005614 Bacteria 3271
19 Ga0068856_100293446 3300005614 Bacteria 1643
20 Ga0068859_100162828 3300005617 Bacteria 2310
21 Ga0068863_100028064 3300005841 Bacteria 5373
22 Ga0068858_100334785 3300005842 Unclassified 1448
23 Ga0068858_100449958 3300005842 Bacteria 1241
24 Ga0081455_10036746 3300005937 Unclassified 4356
25 Ga0097620_100162826 3300006931 Bacteria 2310
26 Ga0105240_10075426 3300009093 Unclassified 4160
27 Ga0105240_10123725 3300009093 Bacteria 3111
28 Ga0105238_10057158 3300009551 Bacteria 3912
29 Ga0105238_10132521 3300009551 Bacteria 2470
30 Ga0105238_10210037 3300009551 Bacteria 1922
31 Ga0157375_10444599 3300013308 Unclassified 1462
32 Ga0163163_10187141 3300014325 Bacteria 2118
33 Ga0207707_10079149 3300025912 Bacteria 2870
34 Ga0207707_10223679 3300025912 Unclassified 1638
35 Ga0207695_10061540 3300025913 Unclassified 3879
36 Ga0207695_10113631 3300025913 Bacteria 2684
37 Ga0207663_10002247 3300025916 Bacteria 9236
38 Ga0207694_10018230 3300025924 Bacteria 5305
39 Ga0207694_10031729 3300025924 Bacteria 4038
40 Ga0207694_10083892 3300025924 Bacteria 2506
41 Ga0207664_10036435 3300025929 Bacteria 3803
42 Ga0207670_10184478 3300025936 Unclassified 1574
43 Ga0207661_10115743 3300025944 Bacteria 2275
44 Ga0207667_10119775 3300025949 Bacteria 2712
45 Ga0207702_10001403 3300026078 Bacteria 24048
46 Ga0207702_10014239 3300026078 Bacteria 6604
47 Ga0207674_10387813 3300026116 Bacteria 1350
48 Ga0265337_1000211 3300028556 Bacteria 31300
49 Ga0265337_1000266 3300028556 Bacteria 28423
50 Ga0265337_1002817 3300028556 Bacteria 7778
51 Ga0265337_1009179 3300028556 Bacteria 3549
52 Ga0265337_1011231 3300028556 Bacteria 3096
53 Ga0265326_10021092 3300028558 Bacteria 1868
54 Ga0265319_1000003 3300028563 Bacteria 340561
55 Ga0265319_1008695 3300028563 Bacteria 4416
56 Ga0265319_1009270 3300028563 Bacteria 4212
57 Ga0265319_1009675 3300028563 Bacteria 4080
58 Ga0265334_10041280 3300028573 Bacteria 1804
59 Ga0265318_10029760 3300028577 Bacteria 2128
60 Ga0265323_10001401 3300028653 Bacteria 11875
61 Ga0265323_10008640 3300028653 Bacteria 4193
62 Ga0265323_10018781 3300028653 Unclassified 2672
63 Ga0265322_10007198 3300028654 Bacteria 3259
64 Ga0265336_10000730 3300028666 Bacteria 17423
65 Ga0265336_10011286 3300028666 Unclassified 3043
66 Ga0265338_10000025 3300028800 Bacteria 296972
67 Ga0265338_10000184 3300028800 Bacteria 116834
68 Ga0265338_10000200 3300028800 Bacteria 113123
69 Ga0265338_10000263 3300028800 Bacteria 95638
70 Ga0265338_10000347 3300028800 Bacteria 84472
71 Ga0265338_10000528 3300028800 Bacteria 67191
72 Ga0265338_10001238 3300028800 Bacteria 42063
73 Ga0265338_10001285 3300028800 Bacteria 41182
74 Ga0265338_10001287 3300028800 Bacteria 41160
75 Ga0265338_10002137 3300028800 Bacteria 30371
76 Ga0265338_10014045 3300028800 Bacteria 8966
77 Ga0265338_10015897 3300028800 Bacteria 8234
78 Ga0265338_10023006 3300028800 Bacteria 6423
79 Ga0265338_10023288 3300028800 Bacteria 6373
80 Ga0265338_10036183 3300028800 Bacteria 4730
81 Ga0265338_10053610 3300028800 Bacteria 3605
82 Ga0265338_10078684 3300028800 Bacteria 2779
83 Ga0265338_10089808 3300028800 Bacteria 2545
84 Ga0265324_10001253 3300029957 Bacteria 14995
85 Ga0265324_10002974 3300029957 Bacteria 8291
86 Ga0265324_10038186 3300029957 Bacteria 1666
87 Ga0265324_10043152 3300029957 Bacteria 1557
88 Ga0265324_10057678 3300029957 Bacteria 1329
89 Ga0265320_10000259 3300031240 Bacteria 43696
90 Ga0265320_10000389 3300031240 Bacteria 35533
91 Ga0265320_10003415 3300031240 Bacteria 10689
92 Ga0265320_10008429 3300031240 Bacteria 6310
93 Ga0265320_10021151 3300031240 Bacteria 3506
94 Ga0265320_10024825 3300031240 Bacteria 3162
95 Ga0265325_10025182 3300031241 Unclassified 3232
96 Ga0265340_10006393 3300031247 Bacteria 6490
97 Ga0265340_10011560 3300031247 Unclassified 4690
98 Ga0265340_10041576 3300031247 Unclassified 2259
99 Ga0265339_10021003 3300031249 Bacteria 3807
100 Ga0265339_10085381 3300031249 Bacteria 1662
101 Ga0265331_10075965 3300031250 Bacteria 1566
102 Ga0265327_10001388 3300031251 Bacteria 30912
103 Ga0265316_10005650 3300031344 Bacteria 12101
104 Ga0265316_10021920 3300031344 Bacteria 5399
105 Ga0265316_10026663 3300031344 Bacteria 4800
106 Ga0265316_10045086 3300031344 Bacteria 3503
107 Ga0265316_10104676 3300031344 Bacteria 2148
108 Ga0265316_10120992 3300031344 Bacteria 1977
109 Ga0265316_10125974 3300031344 Bacteria 1931
110 Ga0265316_10160889 3300031344 Unclassified 1678
111 Ga0265316_10404114 3300031344 Unclassified 983
112 Ga0265313_10002003 3300031595 Bacteria 18315
113 Ga0265313_10010077 3300031595 Bacteria 6043
114 Ga0265314_10018832 3300031711 Bacteria 5364
115 Ga0265314_10026723 3300031711 Bacteria 4332
116 Ga0265314_10124163 3300031711 Bacteria 1620
117 Ga0265342_10031436 3300031712 Unclassified 3282
118 Ga0373930_0001482 3300034816 Bacteria 3503
119 Ga0373928_0000249 3300035084 Bacteria 10643
120 Ga0373944_0007396 3300035089 Bacteria 2944
121 Ga0373951_0010656 3300035091 Bacteria 2064
122 Ga0373932_0000001 3300035112 Bacteria 1459067
123 Ga0373945_0012274 3300035116 Bacteria 2843
124 Ga0373954_0004293 3300035118 Bacteria 6126
125 Ga0373954_0008947 3300035118 Bacteria 4407
126 Ga0373943_0118467 3300035170 Bacteria 1405
127 Ga0316574_0075595 3300035398 Bacteria 2133
128 Ga0373931_0000004 3300035691 Bacteria 535140
129 Ga0373935_0025056 3300035692 Bacteria 3675
130 Ga0373927_0019663 3300035695 Unclassified 4428
131 Ga0373933_0135373 3300035724 Unclassified 1552
132 Ga0373947_0241062 3300035725 Bacteria 1193
133 Ga0373937_0002281 3300036401 Bacteria 16020
134 Ga0373937_0129086 3300036401 Unclassified 2360
135 Ga0373937_0243061 3300036401 Unclassified 1696
136 Ga0373937_0499625 3300036401 Bacteria 1156
137 Ga0316584_0022286 3300036712 Bacteria 4618
138 Ga0373925_0000046 3300037068 Bacteria 131256
139 Ga0395905_0016228 3300037471 Bacteria 7075
140 Ga0395901_0081512 3300038443 Bacteria 3380
141 Ga0451577_0069005 3300042876 Bacteria 3152
142 Ga0451577_0819768 3300042876 Unclassified 840
143 Ga0453684_0642814 3300044712 Unclassified 1158
144 Ga0451576_0024851 3300045051 Bacteria 6464
145 Ga0451576_0051450 3300045051 Bacteria 4319
146 Ga0451576_0254283 3300045051 Bacteria 1836
147 Ga0451576_0295779 3300045051 Bacteria 1693
148 Ga0451576_1000946 3300045051 Unclassified 876
149 Ga0495651_0126871 3300046462 Unclassified 1868
150 Ga0495664_0208522 3300046477 Bacteria 1183
151 Ga0495618_0001513 3300046514 Bacteria 15608
152 Ga0495630_0011266 3300046517 Bacteria 6469
153 Ga0495586_0030973 3300046535 Bacteria 2864
154 Ga0495586_0064575 3300046535 Bacteria 1995
155 Ga0495622_0034474 3300046557 Bacteria 2361
156 Ga0495634_0004782 3300046642 Bacteria 10529
157 Ga0495647_0032702 3300046681 Bacteria 1940
158 Ga0495669_0280836 3300046684 Bacteria 801
159 Ga0495613_0000360 3300046689 Bacteria 40275
160 Ga0495674_0031526 3300047319 Bacteria 4816
161 Ga0495680_0001748 3300047322 Bacteria 23055
162 Ga0495684_0058108 3300047471 Bacteria 2947
163 Ga0501031_0000048 3300049568 Bacteria 65739
164 Ga0501032_0010035 3300049569 Bacteria 6838
165 Ga0501033_0005568 3300049570 Bacteria 9963
166 Ga0501033_0084226 3300049570 Bacteria 2330
167 Ga0501036_0057735 3300049572 Bacteria 3288
168 Ga0501037_0013993 3300049573 Bacteria 5912
169 Ga0501080_0023275 3300049742 Bacteria 5744
170 Ga0501035_0002195 3300049822 Bacteria 19366
171 Ga0501035_0112663 3300049822 Bacteria 2383
172 Ga0501044_0000202 3300049823 Bacteria 75472
173 Ga0501044_0166139 3300049823 Bacteria 2181
174 Ga0500650_0033798 3300053098 Bacteria 2334
175 Ga0265338_10003230
176 rootH1_10320295
177 Ga0070683_100164543
178 Ga0070690_100235733
179 Ga0070689_100081266
180 Ga0070689_100530100
181 Ga0070691_10102634
182 Ga0070714_100010626
183 Ga0070711_100018459
184 Ga0070679_100211952
185 Ga0068853_100219775
186 Ga0070686_100002150
187 Ga0068855_100052082
188 Ga0068855_100078791
189 Ga0068855_100116212
190 Ga0068856_100000556
191 Ga0068856_100038875
192 Ga0068856_100078586
193 Ga0068856_100293446
194 Ga0068859_100162828
195 Ga0068863_100028064
196 Ga0068858_100334785
197 Ga0068858_100449958
198 Ga0081455_10036746
199 Ga0097620_100162826
200 Ga0105240_10075426
201 Ga0105240_10123725
202 Ga0105238_10057158
203 Ga0105238_10132521
204 Ga0105238_10210037
205 Ga0157375_10444599
206 Ga0163163_10187141
207 Ga0207707_10079149
208 Ga0207707_10223679
209 Ga0207695_10061540
210 Ga0207695_10113631
211 Ga0207663_10002247
212 Ga0207694_10018230
213 Ga0207694_10031729
214 Ga0207694_10083892
215 Ga0207664_10036435
216 Ga0207670_10184478
217 Ga0207661_10115743
218 Ga0207667_10119775
219 Ga0207702_10001403
220 Ga0207702_10014239
221 Ga0207674_10387813
222 Ga0265337_1000211
223 Ga0265337_1000266
224 Ga0265337_1002817
225 Ga0265337_1009179
226 Ga0265337_1011231
227 Ga0265326_10021092
228 Ga0265319_1000003
229 Ga0265319_1008695
230 Ga0265319_1009270
231 Ga0265319_1009675
232 Ga0265334_10041280
233 Ga0265318_10029760
234 Ga0265323_10001401
235 Ga0265323_10008640
236 Ga0265323_10018781
237 Ga0265322_10007198
238 Ga0265336_10000730
239 Ga0265336_10011286
240 Ga0265338_10000025
241 Ga0265338_10000184
242 Ga0265338_10000200
243 Ga0265338_10000263
244 Ga0265338_10000347
245 Ga0265338_10000528
246 Ga0265338_10001238
247 Ga0265338_10001285
248 Ga0265338_10001287
249 Ga0265338_10002137
250 Ga0265338_10014045
251 Ga0265338_10015897
252 Ga0265338_10023006
253 Ga0265338_10023288
254 Ga0265338_10036183
255 Ga0265338_10053610
256 Ga0265338_10078684
257 Ga0265338_10089808
258 Ga0265324_10001253
259 Ga0265324_10002974
260 Ga0265324_10038186
261 Ga0265324_10043152
262 Ga0265324_10057678
263 Ga0265320_10000259
264 Ga0265320_10000389
265 Ga0265320_10003415
266 Ga0265320_10008429
267 Ga0265320_10021151
268 Ga0265320_10024825
269 Ga0265325_10025182
270 Ga0265340_10006393
271 Ga0265340_10011560
272 Ga0265340_10041576
273 Ga0265339_10021003
274 Ga0265339_10085381
275 Ga0265331_10075965
276 Ga0265327_10001388
277 Ga0265316_10005650
278 Ga0265316_10021920
279 Ga0265316_10026663
280 Ga0265316_10045086
281 Ga0265316_10104676
282 Ga0265316_10120992
283 Ga0265316_10125974
284 Ga0265316_10160889
285 Ga0265316_10404114
286 Ga0265313_10002003
287 Ga0265313_10010077
288 Ga0265314_10018832
289 Ga0265314_10026723
290 Ga0265314_10124163
291 Ga0265342_10031436
292 Ga0373930_0001482
293 Ga0373928_0000249
294 Ga0373944_0007396
295 Ga0373951_0010656
296 Ga0373932_0000001
297 Ga0373945_0012274
298 Ga0373954_0004293
299 Ga0373954_0008947
300 Ga0373943_0118467
301 Ga0316574_0075595
302 Ga0373931_0000004
303 Ga0373935_0025056
304 Ga0373927_0019663
305 Ga0373933_0135373
306 Ga0373947_0241062
307 Ga0373937_0002281
308 Ga0373937_0129086
309 Ga0373937_0243061
310 Ga0373937_0499625
311 Ga0316584_0022286
312 Ga0373925_0000046
313 Ga0395905_0016228
314 Ga0395901_0081512
315 Ga0451577_0069005
316 Ga0451577_0819768
317 Ga0453684_0642814
318 Ga0451576_0024851
319 Ga0451576_0051450
320 Ga0451576_0254283
321 Ga0451576_0295779
322 Ga0451576_1000946
323 Ga0495651_0126871
324 Ga0495664_0208522
325 Ga0495618_0001513
326 Ga0495630_0011266
327 Ga0495586_0030973
328 Ga0495586_0064575
329 Ga0495622_0034474
330 Ga0495634_0004782
331 Ga0495647_0032702
332 Ga0495669_0280836
333 Ga0495613_0000360
334 Ga0495674_0031526
335 Ga0495680_0001748
336 Ga0495684_0058108
337 Ga0501031_0000048
338 Ga0501032_0010035
339 Ga0501033_0005568
340 Ga0501033_0084226
341 Ga0501036_0057735
342 Ga0501037_0013993
343 Ga0501080_0023275
344 Ga0501035_0002195
345 Ga0501035_0112663
346 Ga0501044_0000202
347 Ga0501044_0166139
348 Ga0500650_0033798

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05157

MshEN

MshEN domain

230

313

0.94

PF14559

TPR_19

Tetratricopeptide repeat

64

126

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6swu-assembly3.cif.gz_E crystal structure of the tpr domain of klc1 in complex with an engineered high-affinity cargo peptide. 0.9027 32 82
3jc8-assembly1.cif.gz_Bd architectural model of the type iva pilus machine in a piliated state 0.9012 221 280
5ow5-assembly2.cif.gz_D p60p80-camsap complex 0.8144 50 103
6mfv-assembly4.cif.gz_D crystal structure of the signal transduction atpase with numerous domains (stand) protein with a tetratricopeptide repeat sensor ph0952 from pyrococcus horikoshii 0.8138 32 103
3ro2-assembly1.cif.gz_A structures of the lgn/numa complex 0.8136 32 103
ID Description Score Start End Superfamily
af_A0A1D8PIG5_2_77_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8906 10 67 1.25.40.10
af_P66948_355_425_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8612 52 100 1.25.40.10
af_A4I968_239_390_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8581 32 103 1.25.40.10
af_I1JV48_354_488_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8373 32 97 1.25.40.10
2d28C02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Type II secretion system, protein E, N-terminal domain 0.8356 202 280 3.30.300.160
ID Description Score Start End GO Terms
AF-A0A3D0SMY9-F1-model_v4 Type IV-A pilus assembly ATPase PilB 0.9392 190 281 GO:0005524
GO:0005737
GO:0005886
GO:0009297
GO:0016887
AF-A0A358NA47-F1-model_v4 General secretion pathway protein GspE 0.9278 197 282 GO:0005524
GO:0005886
GO:0016887
AF-A0A2K2TUS3-F1-model_v4 Type II secretion system protein GspE 0.9165 201 282 GO:0005524
GO:0005886
GO:0016887
AF-F8XNJ0-F1-model_v4 deleted 0.9099 176 282
AF-C6PQU1-F1-model_v4 Type II secretion system protein E 0.9099 202 282 GO:0005524
GO:0005886
GO:0016887

Map