F264608

General Info

Members Datasets Scaffolds Average Seq Length
174 129 348 159

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10745694|Ga0157380_107456942
Length 171
Sequence LRGEQGCELTAMATDYPVTMAIRVLRQHQVSFTAHLYAWEARGGTRASAEHLGVDEHCVVKTLIFENEARSPLCVLMHGDREVSAKNLARQLGHKSVGPCAPEVADRHSGYQVGGTSPFGLKRRMPICCEKSIADLPLLYINGGARGFLVGIQPADLLRVLEPRIVEVAIA

Samples

Sample ID Description Type Environment
1 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
48 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
49 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
73 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
76 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
77 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
78 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
79 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
80 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
85 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
89 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
90 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
91 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
92 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
93 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
94 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
95 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
96 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
97 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
102 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
103 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
104 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
105 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
106 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
109 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
110 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
111 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
112 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
122 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
125 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
128 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
129 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.57
Nodule 0
Rhizoplane 6.32
Rhizosphere 88.51
Stem 0
Stem Tuber 0
Unclassified 10.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157380_10745694 3300014326 Bacteria 990
2 rootL2_10211740 3300003322 Bacteria 1218
3 rootH1_10099994 3300003323 Bacteria 6588
4 Ga0070670_100421981 3300005331 Unclassified 1179
5 Ga0070670_101628376 3300005331 Unclassified 594
6 Ga0070677_10121190 3300005333 Bacteria 1181
7 Ga0068869_100239706 3300005334 Bacteria 1444
8 Ga0070682_100013198 3300005337 Bacteria 4748
9 Ga0070682_100410505 3300005337 Bacteria 1027
10 Ga0068868_101955790 3300005338 Bacteria 556
11 Ga0070689_100002072 3300005340 Bacteria 13018
12 Ga0070691_10134018 3300005341 Unclassified 1257
13 Ga0070669_100024569 3300005353 Bacteria 4322
14 Ga0070675_100135454 3300005354 Bacteria 2102
15 Ga0070703_10245041 3300005406 Bacteria 724
16 Ga0070713_102322503 3300005436 Unclassified 519
17 Ga0070710_10476631 3300005437 Bacteria 850
18 Ga0070701_10796835 3300005438 Unclassified 644
19 Ga0070705_100557485 3300005440 Bacteria 879
20 Ga0070700_100341760 3300005441 Bacteria 1106
21 Ga0070694_100621825 3300005444 Bacteria 872
22 Ga0068867_100126125 3300005459 Bacteria 1984
23 Ga0070685_10210141 3300005466 Bacteria 1270
24 Ga0070686_100030668 3300005544 Bacteria 3282
25 Ga0070693_100375166 3300005547 Bacteria 980
26 Ga0068855_100000078 3300005563 Bacteria 117458
27 Ga0070664_101570362 3300005564 Bacteria 623
28 Ga0070702_100257163 3300005615 Bacteria 1187
29 Ga0068859_100008769 3300005617 Bacteria 10212
30 Ga0068859_100478233 3300005617 Bacteria 1341
31 Ga0068866_10073360 3300005718 Bacteria 1816
32 Ga0068861_100018866 3300005719 Bacteria 4917
33 Ga0068861_100077486 3300005719 Bacteria 2593
34 Ga0068861_100229779 3300005719 Bacteria 1572
35 Ga0068851_10177589 3300005834 Bacteria 1178
36 Ga0068863_100029606 3300005841 Bacteria 5227
37 Ga0068863_100364680 3300005841 Bacteria 1409
38 Ga0068860_100225468 3300005843 Bacteria 1820
39 Ga0068860_101512346 3300005843 Unclassified 693
40 Ga0068862_100402260 3300005844 Bacteria 1281
41 Ga0097621_100076625 3300006237 Bacteria 2774
42 Ga0097621_100086673 3300006237 Bacteria 2614
43 Ga0097621_100814118 3300006237 Bacteria 866
44 Ga0068871_100016202 3300006358 Bacteria 5604
45 Ga0068871_100175070 3300006358 Bacteria 1841
46 Ga0068871_101414618 3300006358 Unclassified 656
47 Ga0068865_100036226 3300006881 Bacteria 3325
48 Ga0068865_100830287 3300006881 Unclassified 799
49 Ga0097620_100008769 3300006931 Bacteria 10212
50 Ga0097620_100478262 3300006931 Bacteria 1341
51 Ga0111539_10111825 3300009094 Bacteria 3205
52 Ga0111539_10835771 3300009094 Unclassified 1071
53 Ga0105245_10372720 3300009098 Bacteria 1420
54 Ga0105242_10006420 3300009176 Bacteria 9056
55 Ga0105242_11427995 3300009176 Bacteria 720
56 Ga0105248_10568647 3300009177 Bacteria 1279
57 Ga0105238_10012237 3300009551 Bacteria 8651
58 Ga0163162_10248826 3300013306 Bacteria 1909
59 Ga0157375_10110818 3300013308 Bacteria 2842
60 Ga0157375_10371171 3300013308 Bacteria 1597
61 Ga0157375_10574230 3300013308 Bacteria 1288
62 Ga0163163_10263127 3300014325 Bacteria 1776
63 Ga0157380_10009401 3300014326 Bacteria 7002
64 Ga0157380_10614075 3300014326 Unclassified 1078
65 Ga0157380_11431561 3300014326 Bacteria 742
66 Ga0157379_10560353 3300014968 Bacteria 1064
67 Ga0157379_10775005 3300014968 Unclassified 904
68 Ga0157376_10111739 3300014969 Bacteria 2406
69 Ga0163161_10155603 3300017792 Bacteria 1740
70 Ga0163161_10185021 3300017792 Bacteria 1599
71 Ga0207656_10130264 3300025321 Bacteria 1178
72 Ga0207682_10177608 3300025893 Unclassified 971
73 Ga0207642_10180277 3300025899 Bacteria 1150
74 Ga0207650_10663361 3300025925 Bacteria 880
75 Ga0207659_10405998 3300025926 Bacteria 1140
76 Ga0207686_10061891 3300025934 Bacteria 2375
77 Ga0207686_10597957 3300025934 Bacteria 868
78 Ga0207670_10107460 3300025936 Bacteria 2003
79 Ga0207669_10072997 3300025937 Bacteria 2163
80 Ga0207704_10051441 3300025938 Bacteria 2491
81 Ga0207704_11407770 3300025938 Unclassified 597
82 Ga0207691_10034306 3300025940 Bacteria 4720
83 Ga0207711_10254368 3300025941 Bacteria 1614
84 Ga0207689_10166577 3300025942 Bacteria 1816
85 Ga0207667_10008423 3300025949 Bacteria 12253
86 Ga0207712_10739283 3300025961 Unclassified 861
87 Ga0207658_10134321 3300025986 Bacteria 1993
88 Ga0207703_10700442 3300026035 Bacteria 963
89 Ga0207641_10071428 3300026088 Bacteria 2986
90 Ga0207648_10160308 3300026089 Bacteria 1987
91 Ga0207675_100018723 3300026118 Bacteria 6464
92 Ga0207675_100025867 3300026118 Bacteria 5460
93 Ga0207675_100040145 3300026118 Bacteria 4368
94 Ga0207675_100060574 3300026118 Bacteria 3534
95 Ga0207675_101494405 3300026118 Bacteria 696
96 Ga0207683_10113150 3300026121 Bacteria 2431
97 Ga0207428_10815596 3300027907 Unclassified 662
98 Ga0268265_10208490 3300028380 Bacteria 1701
99 Ga0268264_10275297 3300028381 Bacteria 1574
100 Ga0268264_10682749 3300028381 Unclassified 1019
101 Ga0265319_1036253 3300028563 Bacteria 1688
102 Ga0307515_10474264 3300028794 Bacteria 864
103 Ga0265338_10347340 3300028800 Bacteria 1068
104 Ga0265338_10692189 3300028800 Bacteria 704
105 Ga0307513_10004863 3300031456 Bacteria 17834
106 Ga0307513_10024805 3300031456 Bacteria 6970
107 Ga0307509_10018026 3300031507 Bacteria 8106
108 Ga0307509_10888331 3300031507 Unclassified 556
109 Ga0265313_10068672 3300031595 Bacteria 1637
110 Ga0265342_10030698 3300031712 Bacteria 3328
111 Ga0265342_10090145 3300031712 Bacteria 1759
112 Ga0307405_11346005 3300031731 Bacteria 623
113 Ga0307413_10056667 3300031824 Bacteria 2391
114 Ga0307409_100077239 3300031995 Bacteria 2674
115 Ga0307411_10014352 3300032005 Bacteria 4404
116 Ga0307415_100780233 3300032126 Bacteria 870
117 Ga0373956_0103591 3300035119 Bacteria 1322
118 Ga0373933_0079962 3300035724 Bacteria 2003
119 Ga0373937_0173834 3300036401 Bacteria 2021
120 Ga0395899_0022701 3300037312 Bacteria 4753
121 Ga0451789_0379084 3300041443 Bacteria 604
122 Ga0451791_0415949 3300041451 Bacteria 1300
123 Ga0451793_0737413 3300041452 Bacteria 2076
124 Ga0451797_0446772 3300041453 Bacteria 1657
125 Ga0451798_0579672 3300041458 Bacteria 659
126 Ga0451802_0367285 3300041460 Bacteria 651
127 Ga0451807_0360447 3300041486 Bacteria 5853
128 Ga0451851_0307683 3300041507 Bacteria 2202
129 Ga0451577_0325175 3300042876 Bacteria 1395
130 Ga0453683_0123688 3300044673 Bacteria 1629
131 Ga0453684_0000278 3300044712 Bacteria 220294
132 Ga0453684_1525846 3300044712 Bacteria 688
133 Ga0451576_0255878 3300045051 Bacteria 1830
134 Ga0451576_0269309 3300045051 Bacteria 1780
135 Ga0451576_0360383 3300045051 Bacteria 1523
136 Ga0495638_0005701 3300046460 Bacteria 9170
137 Ga0495641_0059386 3300046461 Bacteria 1729
138 Ga0495584_0022744 3300046491 Bacteria 3180
139 Ga0495596_0120190 3300046500 Bacteria 1020
140 Ga0495616_0004057 3300046513 Bacteria 9302
141 Ga0495616_0143558 3300046513 Bacteria 1085
142 Ga0495632_0078005 3300046519 Bacteria 1583
143 Ga0495656_0227949 3300046615 Bacteria 934
144 Ga0495625_0008551 3300046660 Bacteria 8712
145 Ga0495625_0022428 3300046660 Bacteria 4842
146 Ga0495657_0453798 3300046675 Bacteria 750
147 Ga0495649_0008712 3300046694 Bacteria 6085
148 Ga0495672_0177859 3300047320 Bacteria 1080
149 Ga0495686_0177941 3300047472 Bacteria 1234
150 Ga0495626_0087160 3300048091 Bacteria 1378
151 Ga0496104_0490581 3300048907 Bacteria 1140
152 Ga0496110_0851844 3300048913 Unclassified 817
153 Ga0496114_0103719 3300048917 Bacteria 2431
154 Ga0496114_0112922 3300048917 Bacteria 2329
155 Ga0501047_0533807 3300049581 Bacteria 998
156 Ga0501048_0282060 3300049582 Bacteria 1181
157 Ga0501069_0009412 3300049585 Bacteria 5155
158 Ga0501070_0000007 3300049586 Bacteria 219869
159 Ga0501071_1255738 3300049587 Bacteria 572
160 Ga0501073_0025530 3300049589 Bacteria 4236
161 Ga0501074_0327613 3300049590 Bacteria 1087
162 Ga0501076_1191109 3300049592 Bacteria 627
163 Ga0501080_0009497 3300049742 Bacteria 8875
164 Ga0501080_0221916 3300049742 Bacteria 1729
165 Ga0501080_0405461 3300049742 Bacteria 1226
166 Ga0501081_0048107 3300049743 Bacteria 2935
167 Ga0501081_0161811 3300049743 Bacteria 1613
168 nmdc:mga08y16_174283_c1 3300050511 Bacteria 2233
169 nmdc:mga08y16_281590_c1 3300050511 Bacteria 1715
170 nmdc:mga08y16_835686_c1 3300050511 Unclassified 911
171 Ga0500611_020685 3300053727 Bacteria 1246
172 Ga0501084_0090922 3300054114 Bacteria 2563
173 Ga0501082_0129677 3300060353 Bacteria 2187
174 Ga0501082_0820932 3300060353 Bacteria 813
175 Ga0157380_10745694
176 rootL2_10211740
177 rootH1_10099994
178 Ga0070670_100421981
179 Ga0070670_101628376
180 Ga0070677_10121190
181 Ga0068869_100239706
182 Ga0070682_100013198
183 Ga0070682_100410505
184 Ga0068868_101955790
185 Ga0070689_100002072
186 Ga0070691_10134018
187 Ga0070669_100024569
188 Ga0070675_100135454
189 Ga0070703_10245041
190 Ga0070713_102322503
191 Ga0070710_10476631
192 Ga0070701_10796835
193 Ga0070705_100557485
194 Ga0070700_100341760
195 Ga0070694_100621825
196 Ga0068867_100126125
197 Ga0070685_10210141
198 Ga0070686_100030668
199 Ga0070693_100375166
200 Ga0068855_100000078
201 Ga0070664_101570362
202 Ga0070702_100257163
203 Ga0068859_100008769
204 Ga0068859_100478233
205 Ga0068866_10073360
206 Ga0068861_100018866
207 Ga0068861_100077486
208 Ga0068861_100229779
209 Ga0068851_10177589
210 Ga0068863_100029606
211 Ga0068863_100364680
212 Ga0068860_100225468
213 Ga0068860_101512346
214 Ga0068862_100402260
215 Ga0097621_100076625
216 Ga0097621_100086673
217 Ga0097621_100814118
218 Ga0068871_100016202
219 Ga0068871_100175070
220 Ga0068871_101414618
221 Ga0068865_100036226
222 Ga0068865_100830287
223 Ga0097620_100008769
224 Ga0097620_100478262
225 Ga0111539_10111825
226 Ga0111539_10835771
227 Ga0105245_10372720
228 Ga0105242_10006420
229 Ga0105242_11427995
230 Ga0105248_10568647
231 Ga0105238_10012237
232 Ga0163162_10248826
233 Ga0157375_10110818
234 Ga0157375_10371171
235 Ga0157375_10574230
236 Ga0163163_10263127
237 Ga0157380_10009401
238 Ga0157380_10614075
239 Ga0157380_11431561
240 Ga0157379_10560353
241 Ga0157379_10775005
242 Ga0157376_10111739
243 Ga0163161_10155603
244 Ga0163161_10185021
245 Ga0207656_10130264
246 Ga0207682_10177608
247 Ga0207642_10180277
248 Ga0207650_10663361
249 Ga0207659_10405998
250 Ga0207686_10061891
251 Ga0207686_10597957
252 Ga0207670_10107460
253 Ga0207669_10072997
254 Ga0207704_10051441
255 Ga0207704_11407770
256 Ga0207691_10034306
257 Ga0207711_10254368
258 Ga0207689_10166577
259 Ga0207667_10008423
260 Ga0207712_10739283
261 Ga0207658_10134321
262 Ga0207703_10700442
263 Ga0207641_10071428
264 Ga0207648_10160308
265 Ga0207675_100018723
266 Ga0207675_100025867
267 Ga0207675_100040145
268 Ga0207675_100060574
269 Ga0207675_101494405
270 Ga0207683_10113150
271 Ga0207428_10815596
272 Ga0268265_10208490
273 Ga0268264_10275297
274 Ga0268264_10682749
275 Ga0265319_1036253
276 Ga0307515_10474264
277 Ga0265338_10347340
278 Ga0265338_10692189
279 Ga0307513_10004863
280 Ga0307513_10024805
281 Ga0307509_10018026
282 Ga0307509_10888331
283 Ga0265313_10068672
284 Ga0265342_10030698
285 Ga0265342_10090145
286 Ga0307405_11346005
287 Ga0307413_10056667
288 Ga0307409_100077239
289 Ga0307411_10014352
290 Ga0307415_100780233
291 Ga0373956_0103591
292 Ga0373933_0079962
293 Ga0373937_0173834
294 Ga0395899_0022701
295 Ga0451789_0379084
296 Ga0451791_0415949
297 Ga0451793_0737413
298 Ga0451797_0446772
299 Ga0451798_0579672
300 Ga0451802_0367285
301 Ga0451807_0360447
302 Ga0451851_0307683
303 Ga0451577_0325175
304 Ga0453683_0123688
305 Ga0453684_0000278
306 Ga0453684_1525846
307 Ga0451576_0255878
308 Ga0451576_0269309
309 Ga0451576_0360383
310 Ga0495638_0005701
311 Ga0495641_0059386
312 Ga0495584_0022744
313 Ga0495596_0120190
314 Ga0495616_0004057
315 Ga0495616_0143558
316 Ga0495632_0078005
317 Ga0495656_0227949
318 Ga0495625_0008551
319 Ga0495625_0022428
320 Ga0495657_0453798
321 Ga0495649_0008712
322 Ga0495672_0177859
323 Ga0495686_0177941
324 Ga0495626_0087160
325 Ga0496104_0490581
326 Ga0496110_0851844
327 Ga0496114_0103719
328 Ga0496114_0112922
329 Ga0501047_0533807
330 Ga0501048_0282060
331 Ga0501069_0009412
332 Ga0501070_0000007
333 Ga0501071_1255738
334 Ga0501073_0025530
335 Ga0501074_0327613
336 Ga0501076_1191109
337 Ga0501080_0009497
338 Ga0501080_0221916
339 Ga0501080_0405461
340 Ga0501081_0048107
341 Ga0501081_0161811
342 nmdc:mga08y16_174283_c1
343 nmdc:mga08y16_281590_c1
344 nmdc:mga08y16_835686_c1
345 Ga0500611_020685
346 Ga0501084_0090922
347 Ga0501082_0129677
348 Ga0501082_0820932

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04073

tRNA_edit

Aminoacyl-tRNA editing domain

42

160

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wdv-assembly2.cif.gz_B crystal structure of hypothetical protein ape2540 0.9316 9 159
2dxa-assembly1.cif.gz_A crystal structure of trans editing enzyme prox from e.coli 0.9258 7 160
1dbx-assembly2.cif.gz_B crystal structure of cysteinyl-trna(pro) deacylase from h. influenzae (hi1434) 0.9205 8 160
1wdv-assembly2.cif.gz_B crystal structure of hypothetical protein ape2540 0.9199 9 159
1dbu-assembly1.cif.gz_A crystal structure of cysteinyl-trna(pro) deacylase protein from h. influenzae (hi1434) 0.9167 8 160
ID Description Score Start End Superfamily
af_Q2G0A0_1_158_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9467 2 157 3.90.960.10
1wdvB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.937 9 159 3.90.960.10
af_Q2G0A0_1_158_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9295 2 157 3.90.960.10
1wdvB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.925 9 159 3.90.960.10
1dbxB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9165 8 160 3.90.960.10
ID Description Score Start End GO Terms
AF-A0A7V9PBZ5-F1-model_v4 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase (EC 4.2.-.-) 0.9923 3 160 GO:0002161
GO:0006412
GO:0016829
AF-A0A7Y2D584-F1-model_v4 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase (EC 4.2.-.-) 0.9898 3 159 GO:0002161
GO:0006412
GO:0016829
AF-A0A2N2HKZ1-F1-model_v4 Cys-tRNA(Pro) deacylase 0.9893 19 159 GO:0002161
GO:0006412
GO:0016829
AF-A0A1S5Y1X2-F1-model_v4 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein 0.9883 1 160 GO:0002161
GO:0006412
GO:0016829
AF-A0A2N2HB54-F1-model_v4 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase (EC 4.2.-.-) 0.9881 4 159 GO:0002161
GO:0006412
GO:0016829

Map