F264212

General Info

Members Datasets Scaffolds Average Seq Length
174 118 170 111

Family's Representative Sequence

Representative Sequence 3300005618|Ga0068864_102005374|Ga0068864_1020053741
Length 120
Sequence LTNSGNLSMDIEIKTWLYDILSAINEIETFFSERPKDFTVYQADIKTKRAVERNVEIIGEAMKRILSKDTTIEFSNARKIVDTRNRIIHGYDTVSDEIIWGIVVKHLPILQTEIQILLSE

Samples

Sample ID Description Type Environment
1 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
3 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
4 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
5 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
60 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
85 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
86 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
96 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
97 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
103 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
104 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
105 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
114 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
115 3300049681 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_B_3_drought Metagenome Rhizosphere
116 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
117 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.7
Metatranscriptomes 0
Isolates 2.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.57
Nodule 0
Rhizoplane 4.02
Rhizosphere 90.23
Stem 0
Stem Tuber 0
Unclassified 5.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS1b_contig_1058429 2162886011 Bacteria 853
2 JGI25157J39369_1008776 3300002741 Bacteria 1390
3 Ga0065714_10026902 3300005288 Bacteria 1576
4 Ga0065714_10489009 3300005288 Unclassified 530
5 Ga0065704_10324084 3300005289 Bacteria 848
6 Ga0065712_10304987 3300005290 Bacteria 853
7 Ga0070658_10039606 3300005327 Bacteria 3802
8 Ga0068869_101216620 3300005334 Bacteria 662
9 Ga0070680_100064907 3300005336 Bacteria 2992
10 Ga0068868_100264673 3300005338 Bacteria 1451
11 Ga0070689_101009039 3300005340 Bacteria 741
12 Ga0070687_100692396 3300005343 Bacteria 711
13 Ga0070668_100211796 3300005347 Bacteria 1595
14 Ga0070671_100102933 3300005355 Bacteria 2396
15 Ga0070671_100264259 3300005355 Bacteria 1463
16 Ga0070671_100545603 3300005355 Bacteria 999
17 Ga0070671_101087245 3300005355 Bacteria 702
18 Ga0070688_101726718 3300005365 Bacteria 513
19 Ga0070667_100530740 3300005367 Unclassified 1080
20 Ga0070667_100669076 3300005367 Bacteria 959
21 Ga0070678_100064474 3300005456 Bacteria 2716
22 Ga0070681_10139106 3300005458 Bacteria 2358
23 Ga0070681_10245379 3300005458 Bacteria 1704
24 Ga0068867_100653939 3300005459 Bacteria 922
25 Ga0068867_100829189 3300005459 Bacteria 827
26 Ga0068867_100981536 3300005459 Unclassified 765
27 Ga0070685_10986966 3300005466 Unclassified 631
28 Ga0070679_100146343 3300005530 Bacteria 2340
29 Ga0068857_102071599 3300005577 Unclassified 558
30 Ga0068856_100404323 3300005614 Bacteria 1385
31 Ga0068856_101171190 3300005614 Unclassified 785
32 Ga0068852_100050731 3300005616 Bacteria 3557
33 Ga0068864_102005374 3300005618 Bacteria 585
34 Ga0068851_10736479 3300005834 Unclassified 609
35 Ga0068863_100359718 3300005841 Bacteria 1419
36 Ga0097621_100561880 3300006237 Unclassified 1039
37 Ga0068871_100041948 3300006358 Bacteria 3671
38 Ga0068871_101468422 3300006358 Bacteria 644
39 Ga0068865_100077556 3300006881 Bacteria 2375
40 Ga0105240_10104661 3300009093 Bacteria 3437
41 Ga0105240_10443115 3300009093 Bacteria 1455
42 Ga0105247_11477399 3300009101 Unclassified 553
43 Ga0105243_11081094 3300009148 Bacteria 809
44 Ga0105241_10221159 3300009174 Bacteria 1592
45 Ga0105242_10089340 3300009176 Bacteria 2589
46 Ga0105242_10722509 3300009176 Unclassified 977
47 Ga0105248_10179669 3300009177 Bacteria 2385
48 Ga0105237_10000344 3300009545 Bacteria 65540
49 Ga0105237_10303582 3300009545 Bacteria 1599
50 Ga0105238_10019488 3300009551 Bacteria 6909
51 Ga0105238_10372223 3300009551 Bacteria 1419
52 Ga0105249_11483458 3300009553 Bacteria 750
53 Ga0105249_12001100 3300009553 Unclassified 652
54 Ga0105239_10000674 3300010375 Bacteria 48668
55 Ga0157373_10725985 3300013100 Bacteria 729
56 Ga0157371_10064435 3300013102 Bacteria 2597
57 Ga0157371_10079248 3300013102 Unclassified 2327
58 Ga0157371_10281340 3300013102 Bacteria 1202
59 Ga0157371_11664942 3300013102 Bacteria 500
60 Ga0157370_10631784 3300013104 Bacteria 979
61 Ga0157370_10735540 3300013104 Bacteria 899
62 Ga0157369_11308368 3300013105 Unclassified 739
63 Ga0157374_11227185 3300013296 Bacteria 771
64 Ga0157378_10002866 3300013297 Bacteria 15378
65 Ga0157378_10822325 3300013297 Bacteria 956
66 Ga0157378_11784251 3300013297 Bacteria 663
67 Ga0163162_11271927 3300013306 Unclassified 836
68 Ga0157372_11661472 3300013307 Bacteria 735
69 Ga0157372_12042772 3300013307 Bacteria 659
70 Ga0157372_12360969 3300013307 Unclassified 611
71 Ga0157375_11245242 3300013308 Unclassified 874
72 Ga0157375_12100589 3300013308 Bacteria 672
73 Ga0163163_10429961 3300014325 Unclassified 1379
74 Ga0157379_10484686 3300014968 Bacteria 1145
75 Ga0157376_10367895 3300014969 Bacteria 1381
76 Ga0163161_10000007 3300017792 Bacteria 301614
77 Ga0163161_10278419 3300017792 Bacteria 1311
78 Ga0213876_10131199 3300021384 Bacteria 1331
79 Ga0209258_113368 3300025242 Bacteria 979
80 Ga0209026_1003800 3300025250 Bacteria 4775
81 Ga0207710_10754544 3300025900 Unclassified 511
82 Ga0207680_10481962 3300025903 Unclassified 882
83 Ga0207707_10634534 3300025912 Bacteria 902
84 Ga0207707_10813767 3300025912 Bacteria 777
85 Ga0207707_11213775 3300025912 Bacteria 610
86 Ga0207695_10065611 3300025913 Bacteria 3732
87 Ga0207695_10165967 3300025913 Bacteria 2136
88 Ga0207671_10000435 3300025914 Bacteria 57448
89 Ga0207671_10284984 3300025914 Bacteria 1303
90 Ga0207660_10064242 3300025917 Bacteria 2649
91 Ga0207652_10000057 3300025921 Bacteria 113664
92 Ga0207681_10641731 3300025923 Bacteria 880
93 Ga0207694_10095580 3300025924 Bacteria 2349
94 Ga0207694_10155411 3300025924 Bacteria 1845
95 Ga0207644_10455579 3300025931 Bacteria 1051
96 Ga0207644_11332001 3300025931 Bacteria 603
97 Ga0207686_10109472 3300025934 Bacteria 1860
98 Ga0207689_11149419 3300025942 Bacteria 654
99 Ga0207712_11051924 3300025961 Bacteria 723
100 Ga0207658_10665251 3300025986 Bacteria 939
101 Ga0207658_10893921 3300025986 Unclassified 808
102 Ga0207702_10357519 3300026078 Bacteria 1399
103 Ga0207641_10914791 3300026088 Unclassified 871
104 Ga0207648_10814308 3300026089 Bacteria 870
105 Ga0207648_10879363 3300026089 Unclassified 836
106 Ga0207683_10135770 3300026121 Bacteria 2214
107 Ga0209968_1028147 3300027526 Bacteria 932
108 Ga0209974_10347835 3300027876 Bacteria 574
109 Ga0268265_10583208 3300028380 Bacteria 1066
110 Ga0265338_10552283 3300028800 Unclassified 806
111 Ga0316181_1023538 3300030744 Bacteria 1061
112 Ga0265331_10517349 3300031250 Bacteria 537
113 Ga0265327_10001837 3300031251 Bacteria 24728
114 Ga0265327_10011245 3300031251 Bacteria 6188
115 Ga0265327_10046872 3300031251 Bacteria 2284
116 Ga0265316_10038519 3300031344 Bacteria 3851
117 Ga0265316_10042590 3300031344 Bacteria 3627
118 Ga0265316_10677913 3300031344 Bacteria 728
119 Ga0316579_10098930 3300031691 Unclassified 1396
120 Ga0265342_10273767 3300031712 Bacteria 895
121 Ga0265342_10563473 3300031712 Unclassified 577
122 Ga0307413_10329402 3300031824 Bacteria 1170
123 Ga0307412_10454595 3300031911 Unclassified 1056
124 Ga0307412_12239701 3300031911 Bacteria 509
125 Ga0307414_10047782 3300032004 Bacteria 2948
126 Ga0307414_10194141 3300032004 Bacteria 1645
127 Ga0307414_10303579 3300032004 Bacteria 1351
128 Ga0307414_10346777 3300032004 Bacteria 1273
129 Ga0307414_10588224 3300032004 Bacteria 997
130 Ga0307414_10850789 3300032004 Bacteria 834
131 Ga0307411_11576854 3300032005 Unclassified 605
132 Ga0316584_0366776 3300036712 Bacteria 1031
133 Ga0395900_0877754 3300037418 Bacteria 821
134 Ga0436365_0658998 3300039437 Bacteria 3158
135 Ga0451795_0597499 3300041456 Unclassified 636
136 Ga0451837_0314340 3300041494 Unclassified 1840
137 Ga0439455_0083036 3300042012 Unclassified 872
138 Ga0451577_0002966 3300042876 Bacteria 19404
139 Ga0451577_0576476 3300042876 Unclassified 1021
140 Ga0453683_0009769 3300044673 Bacteria 6396
141 Ga0453683_0158320 3300044673 Unclassified 1432
142 Ga0453683_0173587 3300044673 Bacteria 1365
143 Ga0453683_0700819 3300044673 Unclassified 664
144 Ga0453684_0003167 3300044712 Bacteria 37855
145 Ga0453684_0317161 3300044712 Bacteria 1767
146 Ga0453684_0330451 3300044712 Bacteria 1724
147 Ga0453684_0686237 3300044712 Bacteria 1114
148 Ga0451576_0001613 3300045051 Bacteria 37853
149 Ga0451576_0006083 3300045051 Bacteria 14877
150 Ga0451576_0123684 3300045051 Bacteria 2694
151 Ga0451576_0628448 3300045051 Unclassified 1128
152 Ga0451576_1046489 3300045051 Unclassified 855
153 Ga0495606_0035658 3300046507 Bacteria 3398
154 Ga0495609_0365221 3300046538 Bacteria 581
155 Ga0495672_0047417 3300047320 Bacteria 2556
156 Ga0495686_0366945 3300047472 Bacteria 779
157 Ga0496100_0319903 3300048903 Bacteria 1165
158 Ga0496101_0233966 3300048904 Bacteria 1429
159 Ga0496102_0670979 3300048905 Unclassified 960
160 Ga0496104_0334991 3300048907 Bacteria 1426
161 Ga0496106_0457043 3300048909 Bacteria 1026
162 Ga0496114_0795971 3300048917 Unclassified 824
163 Ga0501034_0111423 3300049571 Unclassified 2727
164 Ga0501034_0199065 3300049571 Bacteria 1962
165 Ga0501227_056122 3300049665 Unclassified 1002
166 Ga0501240_000648 3300049673 Unclassified 2986
167 Ga0501251_037165 3300049681 Unclassified 722
168 Ga0501259_133644 3300049688 Bacteria 601
169 Ga0501035_0592324 3300049822 Bacteria 904
170 Ga0501044_1260870 3300049823 Bacteria 606

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013308 Ga0157375_12100589 Ga0157375_121005892 96
2 3300017792 Ga0163161_10000007 Ga0163161_10000007112 96
3 3300049571 Ga0501034_0199065 Ga0501034_0199065_331_630 98
4 3300009093 Ga0105240_10443115 Ga0105240_104431151 99
5 3300009545 Ga0105237_10303582 Ga0105237_103035823 99
6 3300009551 Ga0105238_10019488 Ga0105238_100194884 99
7 3300010375 Ga0105239_10000674 Ga0105239_1000067433 99
8 3300025913 Ga0207695_10165967 Ga0207695_101659672 99
9 3300025914 Ga0207671_10284984 Ga0207671_102849842 99
10 3300025924 Ga0207694_10095580 Ga0207694_100955804 99
11 3300005614 Ga0068856_101171190 Ga0068856_1011711902 102
12 3300009174 Ga0105241_10221159 Ga0105241_102211594 102
13 iso_pu_bacteria 2738541279 2738731890 106
14 iso_pu_bacteria 2738541285 2738764455 106
15 iso_pu_bacteria 2738543007 2739213470 106
16 iso_pu_bacteria 2857618242 2857619132 106
17 3300025923 Ga0207681_10641731 Ga0207681_106417312 108
18 3300049673 Ga0501240_000648 Ga0501240_000648_340_669 108
19 3300005466 Ga0070685_10986966 Ga0070685_109869661 109
20 3300005834 Ga0068851_10736479 Ga0068851_107364791 109
21 3300013104 Ga0157370_10631784 Ga0157370_106317842 109
22 3300025912 Ga0207707_11213775 Ga0207707_112137751 109
23 3300027526 Ga0209968_1028147 Ga0209968_10281472 109
24 3300027876 Ga0209974_10347835 Ga0209974_103478352 109
25 2162886011 MRS1b_contig_1058429 MRS1b_0367.00001260 110
26 3300002741 JGI25157J39369_1008776 JGI25157J39369_10087762 110
27 3300005288 Ga0065714_10026902 Ga0065714_100269023 110
28 3300005288 Ga0065714_10489009 Ga0065714_104890091 110
29 3300005289 Ga0065704_10324084 Ga0065704_103240841 110
30 3300005290 Ga0065712_10304987 Ga0065712_103049871 110
31 3300005327 Ga0070658_10039606 Ga0070658_100396064 110
32 3300005334 Ga0068869_101216620 Ga0068869_1012166202 110
33 3300005336 Ga0070680_100064907 Ga0070680_1000649073 110
34 3300005338 Ga0068868_100264673 Ga0068868_1002646732 110
35 3300005340 Ga0070689_101009039 Ga0070689_1010090392 110
36 3300005343 Ga0070687_100692396 Ga0070687_1006923961 110
37 3300005347 Ga0070668_100211796 Ga0070668_1002117961 110
38 3300005355 Ga0070671_100102933 Ga0070671_1001029333 110
39 3300005355 Ga0070671_100264259 Ga0070671_1002642593 110
40 3300005355 Ga0070671_100545603 Ga0070671_1005456032 110
41 3300005355 Ga0070671_101087245 Ga0070671_1010872452 110
42 3300005365 Ga0070688_101726718 Ga0070688_1017267182 110
43 3300005367 Ga0070667_100530740 Ga0070667_1005307402 110
44 3300005367 Ga0070667_100669076 Ga0070667_1006690761 110
45 3300005456 Ga0070678_100064474 Ga0070678_1000644742 110
46 3300005458 Ga0070681_10139106 Ga0070681_101391063 110
47 3300005458 Ga0070681_10245379 Ga0070681_102453793 110
48 3300005459 Ga0068867_100653939 Ga0068867_1006539392 110
49 3300005459 Ga0068867_100829189 Ga0068867_1008291891 110
50 3300005459 Ga0068867_100981536 Ga0068867_1009815362 110
51 3300005530 Ga0070679_100146343 Ga0070679_1001463433 110
52 3300005577 Ga0068857_102071599 Ga0068857_1020715991 110
53 3300005614 Ga0068856_100404323 Ga0068856_1004043232 110
54 3300005616 Ga0068852_100050731 Ga0068852_1000507312 110
55 3300005618 Ga0068864_102005374 Ga0068864_1020053741 110
56 3300005841 Ga0068863_100359718 Ga0068863_1003597183 110
57 3300006237 Ga0097621_100561880 Ga0097621_1005618802 110
58 3300006358 Ga0068871_100041948 Ga0068871_1000419483 110
59 3300006358 Ga0068871_101468422 Ga0068871_1014684221 110
60 3300006881 Ga0068865_100077556 Ga0068865_1000775564 110
61 3300009093 Ga0105240_10104661 Ga0105240_101046613 110
62 3300009101 Ga0105247_11477399 Ga0105247_114773992 110
63 3300009148 Ga0105243_11081094 Ga0105243_110810942 110
64 3300009176 Ga0105242_10089340 Ga0105242_100893402 110
65 3300009176 Ga0105242_10722509 Ga0105242_107225091 110
66 3300009177 Ga0105248_10179669 Ga0105248_101796692 110
67 3300009545 Ga0105237_10000344 Ga0105237_1000034414 110
68 3300009551 Ga0105238_10372223 Ga0105238_103722233 110
69 3300009553 Ga0105249_11483458 Ga0105249_114834582 110
70 3300009553 Ga0105249_12001100 Ga0105249_120011001 110
71 3300013100 Ga0157373_10725985 Ga0157373_107259852 110
72 3300013102 Ga0157371_10064435 Ga0157371_100644353 110
73 3300013102 Ga0157371_10079248 Ga0157371_100792482 110
74 3300013102 Ga0157371_10281340 Ga0157371_102813402 110
75 3300013102 Ga0157371_11664942 Ga0157371_116649421 110
76 3300013104 Ga0157370_10735540 Ga0157370_107355402 110
77 3300013105 Ga0157369_11308368 Ga0157369_113083681 110
78 3300013296 Ga0157374_11227185 Ga0157374_112271852 110
79 3300013297 Ga0157378_10002866 Ga0157378_100028663 110
80 3300013297 Ga0157378_10822325 Ga0157378_108223252 110
81 3300013297 Ga0157378_11784251 Ga0157378_117842511 110
82 3300013306 Ga0163162_11271927 Ga0163162_112719271 110
83 3300013307 Ga0157372_11661472 Ga0157372_116614721 110
84 3300013307 Ga0157372_12042772 Ga0157372_120427722 110
85 3300013307 Ga0157372_12360969 Ga0157372_123609691 110
86 3300013308 Ga0157375_11245242 Ga0157375_112452423 110
87 3300014325 Ga0163163_10429961 Ga0163163_104299612 110
88 3300014968 Ga0157379_10484686 Ga0157379_104846863 110
89 3300014969 Ga0157376_10367895 Ga0157376_103678952 110
90 3300017792 Ga0163161_10278419 Ga0163161_102784193 110
91 3300021384 Ga0213876_10131199 Ga0213876_101311992 110
92 3300025242 Ga0209258_113368 Ga0209258_1133682 110
93 3300025250 Ga0209026_1003800 Ga0209026_10038006 110
94 3300025900 Ga0207710_10754544 Ga0207710_107545441 110
95 3300025903 Ga0207680_10481962 Ga0207680_104819622 110
96 3300025912 Ga0207707_10634534 Ga0207707_106345342 110
97 3300025912 Ga0207707_10813767 Ga0207707_108137672 110
98 3300025913 Ga0207695_10065611 Ga0207695_100656116 110
99 3300025914 Ga0207671_10000435 Ga0207671_100004357 110
100 3300025917 Ga0207660_10064242 Ga0207660_100642423 110
101 3300025921 Ga0207652_10000057 Ga0207652_1000005729 110
102 3300025924 Ga0207694_10155411 Ga0207694_101554113 110
103 3300025931 Ga0207644_10455579 Ga0207644_104555792 110
104 3300025931 Ga0207644_11332001 Ga0207644_113320012 110
105 3300025934 Ga0207686_10109472 Ga0207686_101094721 110
106 3300025942 Ga0207689_11149419 Ga0207689_111494192 110
107 3300025961 Ga0207712_11051924 Ga0207712_110519242 110
108 3300025986 Ga0207658_10665251 Ga0207658_106652511 110
109 3300025986 Ga0207658_10893921 Ga0207658_108939213 110
110 3300026078 Ga0207702_10357519 Ga0207702_103575192 110
111 3300026088 Ga0207641_10914791 Ga0207641_109147912 110
112 3300026089 Ga0207648_10814308 Ga0207648_108143082 110
113 3300026089 Ga0207648_10879363 Ga0207648_108793631 110
114 3300026121 Ga0207683_10135770 Ga0207683_101357703 110
115 3300028380 Ga0268265_10583208 Ga0268265_105832081 110
116 3300028800 Ga0265338_10552283 Ga0265338_105522832 110
117 3300030744 Ga0316181_1023538 Ga0316181_10235381 110
118 3300031250 Ga0265331_10517349 Ga0265331_105173492 110
119 3300031251 Ga0265327_10001837 Ga0265327_1000183714 110
120 3300031251 Ga0265327_10011245 Ga0265327_100112453 110
121 3300031251 Ga0265327_10046872 Ga0265327_100468724 110
122 3300031344 Ga0265316_10038519 Ga0265316_100385192 110
123 3300031344 Ga0265316_10042590 Ga0265316_100425904 110
124 3300031344 Ga0265316_10677913 Ga0265316_106779132 110
125 3300031691 Ga0316579_10098930 Ga0316579_100989302 110
126 3300031712 Ga0265342_10273767 Ga0265342_102737671 110
127 3300031712 Ga0265342_10563473 Ga0265342_105634731 110
128 3300031824 Ga0307413_10329402 Ga0307413_103294021 110
129 3300031911 Ga0307412_10454595 Ga0307412_104545951 110
130 3300031911 Ga0307412_12239701 Ga0307412_122397011 110
131 3300032004 Ga0307414_10047782 Ga0307414_100477823 110
132 3300032004 Ga0307414_10194141 Ga0307414_101941413 110
133 3300032004 Ga0307414_10303579 Ga0307414_103035793 110
134 3300032004 Ga0307414_10346777 Ga0307414_103467772 110
135 3300032004 Ga0307414_10588224 Ga0307414_105882241 110
136 3300032004 Ga0307414_10850789 Ga0307414_108507892 110
137 3300032005 Ga0307411_11576854 Ga0307411_115768542 110
138 3300036712 Ga0316584_0366776 Ga0316584_0366776_477_809 110
139 3300037418 Ga0395900_0877754 Ga0395900_0877754_406_744 110
140 3300039437 Ga0436365_0658998 Ga0436365_0658998_2261_2599 110
141 3300041456 Ga0451795_0597499 Ga0451795_0597499_203_547 110
142 3300041494 Ga0451837_0314340 Ga0451837_0314340_1361_1696 110
143 3300042012 Ga0439455_0083036 Ga0439455_0083036_101_433 110
144 3300042876 Ga0451577_0002966 Ga0451577_0002966_15839_16177 110
145 3300042876 Ga0451577_0576476 Ga0451577_0576476_521_868 110
146 3300044673 Ga0453683_0009769 Ga0453683_0009769_4215_4553 110
147 3300044673 Ga0453683_0158320 Ga0453683_0158320_219_557 110
148 3300044673 Ga0453683_0173587 Ga0453683_0173587_660_998 110
149 3300044673 Ga0453683_0700819 Ga0453683_0700819_189_527 110
150 3300044712 Ga0453684_0003167 Ga0453684_0003167_22847_23185 110
151 3300044712 Ga0453684_0317161 Ga0453684_0317161_899_1237 110
152 3300044712 Ga0453684_0330451 Ga0453684_0330451_557_895 110
153 3300044712 Ga0453684_0686237 Ga0453684_0686237_331_669 110
154 3300045051 Ga0451576_0001613 Ga0451576_0001613_14671_15009 110
155 3300045051 Ga0451576_0006083 Ga0451576_0006083_5736_6074 110
156 3300045051 Ga0451576_0123684 Ga0451576_0123684_523_861 110
157 3300045051 Ga0451576_0628448 Ga0451576_0628448_233_571 110
158 3300045051 Ga0451576_1046489 Ga0451576_1046489_251_598 110
159 3300046507 Ga0495606_0035658 Ga0495606_0035658_2689_3024 110
160 3300046538 Ga0495609_0365221 Ga0495609_0365221_80_418 110
161 3300047320 Ga0495672_0047417 Ga0495672_0047417_449_793 110
162 3300047472 Ga0495686_0366945 Ga0495686_0366945_115_447 110
163 3300048903 Ga0496100_0319903 Ga0496100_0319903_204_542 110
164 3300048904 Ga0496101_0233966 Ga0496101_0233966_820_1158 110
165 3300048905 Ga0496102_0670979 Ga0496102_0670979_137_475 110
166 3300048907 Ga0496104_0334991 Ga0496104_0334991_702_1040 110
167 3300048909 Ga0496106_0457043 Ga0496106_0457043_420_758 110
168 3300048917 Ga0496114_0795971 Ga0496114_0795971_363_701 110
169 3300049571 Ga0501034_0111423 Ga0501034_0111423_196_540 110
170 3300049665 Ga0501227_056122 Ga0501227_056122_173_511 110
171 3300049681 Ga0501251_037165 Ga0501251_037165_380_712 110
172 3300049688 Ga0501259_133644 Ga0501259_133644_101_433 110
173 3300049822 Ga0501035_0592324 Ga0501035_0592324_199_537 110
174 3300049823 Ga0501044_1260870 Ga0501044_1260870_152_490 110

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01934

HepT-like

Ribonuclease HepT-like

20

117

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2aa4-assembly1.cif.gz_B crystal structure of escherichia coli putative n-acetylmannosamine kinase, new york structural genomics consortium 0.8559 30 59
6jdb-assembly1.cif.gz_A-2 crystal structure of n-acetyl mannosmaine kinase in complex with mannac-6p and adp from haemophilus influenzae 0.801 29 57
7aer-assembly1.cif.gz_B rebuilt and re-refined pdb entry 5yep: tri-ampylated shewanella oneidensis hepn toxin in complex with mnt antitoxin 0.7589 1 109
7bxo-assembly1.cif.gz_F crystal structure of the toxin-antitoxin with amp-pnp 0.7557 1 106
7aer-assembly1.cif.gz_B rebuilt and re-refined pdb entry 5yep: tri-ampylated shewanella oneidensis hepn toxin in complex with mnt antitoxin 0.7498 1 109
ID Description Score Start End Superfamily
2aa4B02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8559 30 59 3.30.420.40
af_Q58775_1_109_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.8527 1 107 1.20.120.330
af_Q58775_1_109_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.8316 1 107 1.20.120.330
af_Q58613_1_121_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.7939 1 109 1.20.120.330
af_Q58613_1_121_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.7806 1 109 1.20.120.330
ID Description Score Start End GO Terms
AF-A0A3M1KX84-F1-model_v4 DUF86 domain-containing protein 0.9604 1 108 GO:0004540
GO:0110001
AF-S7VMX4-F1-model_v4 Polymerase nucleotidyl transferase domain-containing protein 0.9577 1 108 GO:0004540
GO:0016779
GO:0110001
AF-A0A5J4RGE8-F1-model_v4 DUF86 domain-containing protein 0.9572 1 108 GO:0004540
GO:0110001
AF-G5SX68-F1-model_v4 Putative toxin-antitoxin system, antitoxin component 0.9562 10 81 GO:0004540
GO:0110001
AF-A0A2N1KJY2-F1-model_v4 Antitoxin 0.9543 1 108

Feature Viewer

pLDDT pTM Quality
93.82 0.88 High
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Predicted Structure (AlphaFold2)

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