F263296

General Info

Members Datasets Scaffolds Average Seq Length
173 140 346 271

Family's Representative Sequence

Representative Sequence 3300048904|Ga0496101_0000073|Ga0496101_0000073_5293_6180
Length 295
Sequence MATPIATEKSAMRDAEPFPTVVDVDDRQLKASHRALWASGDYPAVAAELIPDLGPELVRACGVGPGHRVLDVAAGSGNAAIPAAVIGAVVTASDLTPELLEAGRVIAADRNIELEWVEADAEEMPFADNSFDFVMSCVGAMFAPHHQAVADELIRVCRPDGTIGMINWTPDGFIGAMFATIEPYAPPLPPGATASPMWGDEAHVRKLFGDRVTDLQMQRQVVVMDHSVTPLDFREYWKRNYGPIIAAYRFNDEKPDRAVELDARFLVFLERSNQSPVLGRTDYPAEYLLVTAVKQ

Samples

Sample ID Description Type Environment
1 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
64 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
65 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
69 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
70 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
71 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
72 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
73 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
74 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
75 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
76 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
77 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
80 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
81 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
82 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
83 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
84 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
85 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
86 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
87 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
88 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
89 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
90 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
91 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
92 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
93 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
94 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
97 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
98 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
99 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
100 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
101 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
102 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
103 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
117 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
118 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
119 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
120 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
125 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
126 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
127 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
128 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
129 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
130 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
131 2619618881 Frankia sp. ACN1ag Isolate Unclassified
132 2619619003 Frankia sp. CpI1-P Isolate Nodule
133 2626541554 Frankia sp. AvcI.1 Isolate Nodule
134 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
135 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
136 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
137 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
138 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
139 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
140 8054920844 Frankia tisae Agncl-8 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.64
Metatranscriptomes 0
Isolates 6.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.36
Nodule 2.89
Rhizoplane 6.36
Rhizosphere 75.14
Stem 0
Stem Tuber 0.58
Unclassified 0.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496101_0000073 3300048904 Bacteria 113870
2 JGI25407J50210_10000052 3300003373 Bacteria 13657
3 Ga0070683_100386706 3300005329 Bacteria 1333
4 Ga0070682_100011833 3300005337 Bacteria 4991
5 Ga0068868_100029809 3300005338 Bacteria 4180
6 Ga0068868_100103998 3300005338 Bacteria 2301
7 Ga0068868_100474905 3300005338 Bacteria 1091
8 Ga0070660_100204201 3300005339 Bacteria 1603
9 Ga0070668_100003560 3300005347 Bacteria 11485
10 Ga0070668_100235315 3300005347 Bacteria 1516
11 Ga0070675_100070088 3300005354 Bacteria 2905
12 Ga0070674_100257823 3300005356 Bacteria 1372
13 Ga0070714_100105886 3300005435 Bacteria 2484
14 Ga0070663_100035618 3300005455 Bacteria 3454
15 Ga0070678_100114408 3300005456 Bacteria 2116
16 Ga0070684_100352260 3300005535 Bacteria 1354
17 Ga0068853_100165883 3300005539 Bacteria 1996
18 Ga0068853_100281396 3300005539 Bacteria 1533
19 Ga0068853_100397065 3300005539 Bacteria 1290
20 Ga0070696_100402076 3300005546 Bacteria 1072
21 Ga0070665_100619523 3300005548 Bacteria 1095
22 Ga0068857_100110851 3300005577 Bacteria 2466
23 Ga0068854_100021899 3300005578 Bacteria 4343
24 Ga0068854_100361741 3300005578 Bacteria 1190
25 Ga0068856_100240810 3300005614 Bacteria 1824
26 Ga0068864_100160179 3300005618 Bacteria 2045
27 Ga0068861_100175976 3300005719 Bacteria 1777
28 Ga0068861_100188622 3300005719 Bacteria 1722
29 Ga0068861_100413576 3300005719 Bacteria 1200
30 Ga0068863_100310177 3300005841 Bacteria 1531
31 Ga0081455_10038015 3300005937 Bacteria 4264
32 Ga0081538_10000318 3300005981 Bacteria 55086
33 Ga0081538_10163504 3300005981 Bacteria 984
34 Ga0070717_10228710 3300006028 Bacteria 1637
35 Ga0075365_10001577 3300006038 Bacteria 10474
36 Ga0075365_10061082 3300006038 Bacteria 2516
37 Ga0075363_100024280 3300006048 Bacteria 3080
38 Ga0075363_100027052 3300006048 Bacteria 2938
39 Ga0070716_100044630 3300006173 Bacteria 2484
40 Ga0075369_10023760 3300006186 Bacteria 2536
41 Ga0075428_100020672 3300006844 Bacteria 7290
42 Ga0075428_100050092 3300006844 Bacteria 4581
43 Ga0075433_10000595 3300006852 Bacteria 24004
44 Ga0111539_10063765 3300009094 Bacteria 4360
45 Ga0111539_10359286 3300009094 Bacteria 1695
46 Ga0105245_10000023 3300009098 Bacteria 180844
47 Ga0105247_10000289 3300009101 Bacteria 45790
48 Ga0105243_10065325 3300009148 Bacteria 2922
49 Ga0105242_10474878 3300009176 Bacteria 1184
50 Ga0105248_10006776 3300009177 Bacteria 12563
51 Ga0105237_10385756 3300009545 Bacteria 1406
52 Ga0105239_10139925 3300010375 Bacteria 2697
53 Ga0163162_10467721 3300013306 Bacteria 1392
54 Ga0163163_10005336 3300014325 Bacteria 11101
55 Ga0157377_10099318 3300014745 Bacteria 1731
56 Ga0157379_10005835 3300014968 Bacteria 10584
57 Ga0157376_10568529 3300014969 Bacteria 1124
58 Ga0207642_10055212 3300025899 Bacteria 1815
59 Ga0207642_10266695 3300025899 Bacteria 979
60 Ga0207710_10000247 3300025900 Bacteria 45942
61 Ga0207710_10116346 3300025900 Unclassified 1273
62 Ga0207680_10089589 3300025903 Bacteria 1953
63 Ga0207709_10031867 3300025935 Bacteria 3083
64 Ga0207665_10120957 3300025939 Bacteria 1849
65 Ga0207691_10064445 3300025940 Bacteria 3320
66 Ga0207661_10227426 3300025944 Bacteria 1651
67 Ga0207651_10203918 3300025960 Bacteria 1587
68 Ga0207668_10001213 3300025972 Bacteria 15305
69 Ga0207668_10552360 3300025972 Bacteria 998
70 Ga0207677_10128923 3300026023 Bacteria 1917
71 Ga0207639_10344301 3300026041 Bacteria 1330
72 Ga0207678_10088608 3300026067 Bacteria 2645
73 Ga0207678_10113463 3300026067 Bacteria 2312
74 Ga0207676_10187395 3300026095 Bacteria 1817
75 Ga0207674_10061188 3300026116 Bacteria 3805
76 Ga0207675_100236382 3300026118 Bacteria 1764
77 Ga0268266_10432756 3300028379 Bacteria 1248
78 Ga0268265_10165906 3300028380 Bacteria 1882
79 Ga0307513_10004768 3300031456 Bacteria 18011
80 Ga0307513_10195367 3300031456 Bacteria 1870
81 Ga0307413_10464252 3300031824 Bacteria 1008
82 Ga0307410_10392192 3300031852 Bacteria 1120
83 Ga0307407_10051992 3300031903 Bacteria 2351
84 Ga0307409_100615888 3300031995 Bacteria 1075
85 Ga0307416_100343484 3300032002 Bacteria 1507
86 Ga0307414_10616707 3300032004 Bacteria 975
87 Ga0439461_0017013 3300041410 Bacteria 1409
88 Ga0439465_0003720 3300041413 Bacteria 4970
89 Ga0439465_0018515 3300041413 Bacteria 2176
90 Ga0439442_023043 3300042002 Bacteria 1294
91 Ga0439435_0047434 3300042436 Bacteria 1220
92 Ga0466965_0048763 3300044683 Bacteria 2099
93 Ga0466961_0243986 3300044693 Bacteria 1104
94 Ga0466963_0043749 3300044694 Bacteria 2946
95 Ga0466963_0525166 3300044694 Bacteria 836
96 Ga0466957_0004842 3300044842 Bacteria 7532
97 Ga0466958_0040218 3300045836 Bacteria 2810
98 Ga0466967_0069634 3300045976 Bacteria 3145
99 Ga0466967_0084849 3300045976 Bacteria 2866
100 Ga0466967_0112775 3300045976 Bacteria 2500
101 Ga0466967_0186812 3300045976 Bacteria 1957
102 Ga0466967_0476012 3300045976 Bacteria 1223
103 Ga0495603_0058509 3300046455 Bacteria 2279
104 Ga0495629_0022964 3300046459 Bacteria 4446
105 Ga0495641_0037178 3300046461 Bacteria 2284
106 Ga0495631_0219477 3300046518 Bacteria 812
107 Ga0495640_0021481 3300046533 Bacteria 4736
108 Ga0495625_0000032 3300046660 Bacteria 233135
109 Ga0495674_0041294 3300047319 Bacteria 4122
110 Ga0495593_0031931 3300047673 Bacteria 2873
111 Ga0495626_0028407 3300048091 Bacteria 2713
112 Ga0496102_0000006 3300048905 Bacteria 471494
113 Ga0496103_0000006 3300048906 Bacteria 470539
114 Ga0496103_0260003 3300048906 Bacteria 1117
115 Ga0496104_0473977 3300048907 Bacteria 1163
116 Ga0496106_0008153 3300048909 Bacteria 7740
117 Ga0496107_0241511 3300048910 Bacteria 1344
118 Ga0496108_0202436 3300048911 Bacteria 1723
119 Ga0496110_0244512 3300048913 Bacteria 1633
120 Ga0496112_0109191 3300048915 Bacteria 2737
121 Ga0496112_0241863 3300048915 Bacteria 1757
122 Ga0496116_0000025 3300048919 Bacteria 470539
123 Ga0496117_0000006 3300048920 Bacteria 758420
124 Ga0496118_0000004 3300048921 Bacteria 758420
125 Ga0496119_0001251 3300048922 Bacteria 31588
126 Ga0496119_0002672 3300048922 Bacteria 19263
127 Ga0496120_0000569 3300048923 Bacteria 56336
128 Ga0496120_0000706 3300048923 Bacteria 48969
129 Ga0496121_0000090 3300048924 Bacteria 217920
130 Ga0496126_0003169 3300048929 Bacteria 21171
131 Ga0501031_0011180 3300049568 Bacteria 5849
132 Ga0501031_0016244 3300049568 Bacteria 4834
133 Ga0501034_0067807 3300049571 Bacteria 3580
134 Ga0501034_0199993 3300049571 Bacteria 1957
135 Ga0501036_0024889 3300049572 Bacteria 5049
136 Ga0501038_0057019 3300049574 Bacteria 3355
137 Ga0501039_0010339 3300049575 Bacteria 7116
138 Ga0501042_0004746 3300049578 Bacteria 8677
139 Ga0501046_0099745 3300049580 Bacteria 2229
140 Ga0501047_0000142 3300049581 Bacteria 87761
141 Ga0501047_0354403 3300049581 Bacteria 1304
142 Ga0501067_0260011 3300049583 Bacteria 966
143 Ga0501070_0095682 3300049586 Bacteria 2457
144 Ga0501071_0003857 3300049587 Bacteria 9442
145 Ga0501072_0094417 3300049588 Bacteria 2376
146 Ga0501075_0038239 3300049591 Bacteria 3586
147 Ga0501076_0005849 3300049592 Bacteria 8872
148 Ga0501081_0062581 3300049743 Bacteria 2581
149 Ga0501045_0095001 3300049824 Bacteria 2205
150 nmdc:mga03n38_147269_c1 3300050490 Bacteria 1181
151 nmdc:mga03n38_173736_c1 3300050490 Bacteria 1099
152 nmdc:mga03n38_38722_c1 3300050490 Bacteria 2064
153 nmdc:mga0yw44_23163_c1 3300050492 Bacteria 3495
154 nmdc:mga05p37_54963_c1 3300050507 Bacteria 4897
155 nmdc:mga08y16_304728_c1 3300050511 Bacteria 1641
156 nmdc:mga0a205_491_c1 3300050515 Bacteria 30978
157 nmdc:mga0sz30_5138_c2 3300050516 Bacteria 3394
158 Ga0495619_0072551 3300053085 Bacteria 2306
159 Ga0500562_004063 3300053108 Bacteria 3688
160 Ga0501084_0062623 3300054114 Bacteria 3114
161 Ga0501082_0038147 3300060353 Bacteria 4145
162 Ga0530510_0564078 3300061734 Bacteria 865
163 2579857341 2579778521 Bacteria 7624758
164 2619857375 2619618881 Bacteria 7521104
165 2620353211 2619619003 Bacteria 7619552
166 2626638998 2626541554 Bacteria 7741902
167 2644526801 2643221694 Bacteria 4392972
168 2842138647 2842134933 Bacteria 5847019
169 2899370274 2899370129 Bacteria 6781179
170 2915362412 2915358134 Bacteria 6050864
171 2919715413 2919713450 Bacteria 7431245
172 8054914409 8054913762 Bacteria 7713009
173 8054924982 8054920844 Bacteria 7068637
174 Ga0496101_0000073
175 JGI25407J50210_10000052
176 Ga0070683_100386706
177 Ga0070682_100011833
178 Ga0068868_100029809
179 Ga0068868_100103998
180 Ga0068868_100474905
181 Ga0070660_100204201
182 Ga0070668_100003560
183 Ga0070668_100235315
184 Ga0070675_100070088
185 Ga0070674_100257823
186 Ga0070714_100105886
187 Ga0070663_100035618
188 Ga0070678_100114408
189 Ga0070684_100352260
190 Ga0068853_100165883
191 Ga0068853_100281396
192 Ga0068853_100397065
193 Ga0070696_100402076
194 Ga0070665_100619523
195 Ga0068857_100110851
196 Ga0068854_100021899
197 Ga0068854_100361741
198 Ga0068856_100240810
199 Ga0068864_100160179
200 Ga0068861_100175976
201 Ga0068861_100188622
202 Ga0068861_100413576
203 Ga0068863_100310177
204 Ga0081455_10038015
205 Ga0081538_10000318
206 Ga0081538_10163504
207 Ga0070717_10228710
208 Ga0075365_10001577
209 Ga0075365_10061082
210 Ga0075363_100024280
211 Ga0075363_100027052
212 Ga0070716_100044630
213 Ga0075369_10023760
214 Ga0075428_100020672
215 Ga0075428_100050092
216 Ga0075433_10000595
217 Ga0111539_10063765
218 Ga0111539_10359286
219 Ga0105245_10000023
220 Ga0105247_10000289
221 Ga0105243_10065325
222 Ga0105242_10474878
223 Ga0105248_10006776
224 Ga0105237_10385756
225 Ga0105239_10139925
226 Ga0163162_10467721
227 Ga0163163_10005336
228 Ga0157377_10099318
229 Ga0157379_10005835
230 Ga0157376_10568529
231 Ga0207642_10055212
232 Ga0207642_10266695
233 Ga0207710_10000247
234 Ga0207710_10116346
235 Ga0207680_10089589
236 Ga0207709_10031867
237 Ga0207665_10120957
238 Ga0207691_10064445
239 Ga0207661_10227426
240 Ga0207651_10203918
241 Ga0207668_10001213
242 Ga0207668_10552360
243 Ga0207677_10128923
244 Ga0207639_10344301
245 Ga0207678_10088608
246 Ga0207678_10113463
247 Ga0207676_10187395
248 Ga0207674_10061188
249 Ga0207675_100236382
250 Ga0268266_10432756
251 Ga0268265_10165906
252 Ga0307513_10004768
253 Ga0307513_10195367
254 Ga0307413_10464252
255 Ga0307410_10392192
256 Ga0307407_10051992
257 Ga0307409_100615888
258 Ga0307416_100343484
259 Ga0307414_10616707
260 Ga0439461_0017013
261 Ga0439465_0003720
262 Ga0439465_0018515
263 Ga0439442_023043
264 Ga0439435_0047434
265 Ga0466965_0048763
266 Ga0466961_0243986
267 Ga0466963_0043749
268 Ga0466963_0525166
269 Ga0466957_0004842
270 Ga0466958_0040218
271 Ga0466967_0069634
272 Ga0466967_0084849
273 Ga0466967_0112775
274 Ga0466967_0186812
275 Ga0466967_0476012
276 Ga0495603_0058509
277 Ga0495629_0022964
278 Ga0495641_0037178
279 Ga0495631_0219477
280 Ga0495640_0021481
281 Ga0495625_0000032
282 Ga0495674_0041294
283 Ga0495593_0031931
284 Ga0495626_0028407
285 Ga0496102_0000006
286 Ga0496103_0000006
287 Ga0496103_0260003
288 Ga0496104_0473977
289 Ga0496106_0008153
290 Ga0496107_0241511
291 Ga0496108_0202436
292 Ga0496110_0244512
293 Ga0496112_0109191
294 Ga0496112_0241863
295 Ga0496116_0000025
296 Ga0496117_0000006
297 Ga0496118_0000004
298 Ga0496119_0001251
299 Ga0496119_0002672
300 Ga0496120_0000569
301 Ga0496120_0000706
302 Ga0496121_0000090
303 Ga0496126_0003169
304 Ga0501031_0011180
305 Ga0501031_0016244
306 Ga0501034_0067807
307 Ga0501034_0199993
308 Ga0501036_0024889
309 Ga0501038_0057019
310 Ga0501039_0010339
311 Ga0501042_0004746
312 Ga0501046_0099745
313 Ga0501047_0000142
314 Ga0501047_0354403
315 Ga0501067_0260011
316 Ga0501070_0095682
317 Ga0501071_0003857
318 Ga0501072_0094417
319 Ga0501075_0038239
320 Ga0501076_0005849
321 Ga0501081_0062581
322 Ga0501045_0095001
323 nmdc:mga03n38_147269_c1
324 nmdc:mga03n38_173736_c1
325 nmdc:mga03n38_38722_c1
326 nmdc:mga0yw44_23163_c1
327 nmdc:mga05p37_54963_c1
328 nmdc:mga08y16_304728_c1
329 nmdc:mga0a205_491_c1
330 nmdc:mga0sz30_5138_c2
331 Ga0495619_0072551
332 Ga0500562_004063
333 Ga0501084_0062623
334 Ga0501082_0038147
335 Ga0530510_0564078
336 2579857341
337 2619857375
338 2620353211
339 2626638998
340 2644526801
341 2842138647
342 2899370274
343 2915362412
344 2919715413
345 8054914409
346 8054924982

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08241

Methyltransf_11

Methyltransferase domain

70

165

0.97

PF13649

Methyltransf_25

Methyltransferase domain

69

161

0.92

PF13847

Methyltransf_31

Methyltransferase domain

64

179

0.91

PF01209

Ubie_methyltran

ubiE/COQ5 methyltransferase family

56

178

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zbr-assembly1.cif.gz_A crystal structure of ribosomal protein l11 methyltransferase from thermus thermophilus in complex with s-adenosyl-ornithine 0.8573 34 191
2zbq-assembly1.cif.gz_A crystal structure of ribosomal protein l11 methyltransferase from thermus thermophilus in complex with s-adenosyl-l-homocysteine 0.8566 34 191
5cm2-assembly1.cif.gz_Z structure of y. lipolytica trm9-trm112 complex, a methyltransferase modifying u34 in the anticodon loop of some trnas 0.8541 33 152
3cjt-assembly8.cif.gz_O ribosomal protein l11 methyltransferase (prma) in complex with dimethylated ribosomal protein l11 0.8482 34 263
2nxj-assembly2.cif.gz_B t.thermophilus ribosomal protein l11 methyltransferase (prma) in space group p 21 21 2 0.8463 34 263
ID Description Score Start End Superfamily
af_Q4D3E1_216_398_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9535 35 76 3.40.50.150
af_P9WLY7_8_274_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9429 6 264 3.40.50.150
af_P9WLY7_8_274_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9221 6 264 3.40.50.150
af_A0A1D6EFY7_537_616_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9146 44 103 3.40.50.150
af_Q553T0_166_421_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9086 27 149 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A8B5XBL4-F1-model_v4 Class I SAM-dependent methyltransferase 0.9468 8 264 GO:0008168
GO:0032259
AF-A0A382SH79-F1-model_v4 Methyltransferase type 11 domain-containing protein 0.9357 34 146 GO:0008757
AF-A0A4R2CR44-F1-model_v4 Methyltransferase family protein 0.9267 1 264 GO:0008757
GO:0032259
AF-A0A4R2CR44-F1-model_v4 Methyltransferase family protein 0.9234 1 264 GO:0008757
GO:0032259
AF-A0A7G7MQX4-F1-model_v4 Class I SAM-dependent methyltransferase 0.9204 3 264 GO:0008168
GO:0032259

Map