F263249

General Info

Members Datasets Scaffolds Average Seq Length
173 114 346 349

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0046101|Ga0495625_0046101_1778_2989
Length 403
Sequence MGYNTHILDEKTKDEGLKKKGKKTEKSRKIYHFQSFIFHPKIFCLFLIRITTFTPMNFTDELVQWYHKNKRDLPWRNTTDAYVIWLSEIILQQTRVEQGLPYFYRFVERYPDVSSFAAAHEDEVLKLWQGLGYYSRGRNMLKTAQLVQEQYHGKFPQNYDELIKLKGIGEYTAAAIASFSANEPKAVVDGNVNRVLARYFGIYEPINSTTGKKTFQALANDLLNQQAPALHNQAMMEFGAMLCKPKNPACGICPVHTGCVAFISNATNALPVKLKTVKVRERFLNYFLITDGDTILMNKRGDKDIWANMYDLPMVETTSLLPVNELADLPQVRDIFGAGIKITGDIPVQRHILTHQRLHIRLIKTTSKPVKLKVNWFYTTVENLHDLALPKAIFILLKNIFNL

Samples

Sample ID Description Type Environment
1 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
43 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
44 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
67 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
68 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
69 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
70 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
73 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
74 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
77 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
78 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
79 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
80 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
81 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
82 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
83 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
84 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
85 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
86 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
87 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
88 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
89 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
92 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
93 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
94 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
95 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
96 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
97 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
98 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
101 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
102 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
103 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
104 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
105 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
106 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
107 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
108 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
109 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
110 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
111 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
112 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
113 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
114 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.95
Metatranscriptomes 0
Isolates 4.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.78
Nodule 0
Rhizoplane 1.16
Rhizosphere 86.13
Stem 0
Stem Tuber 0
Unclassified 0.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495625_0046101 3300046660 Bacteria 3146
2 JGI24737J22298_10000179 3300001990 Bacteria 20450
3 JGI24737J22298_10005055 3300001990 Bacteria 4572
4 JGI24737J22298_10008690 3300001990 Bacteria 3394
5 JGI24735J21928_10000033 3300002067 Bacteria 70674
6 JGI25162J39368_1000088 3300002737 Bacteria 106999
7 rootH1_10046508 3300003316 Bacteria 4859
8 rootH2_10000823 3300003320 Bacteria 101452
9 rootH2_10043869 3300003320 Bacteria 10138
10 rootH2_10257148 3300003320 Bacteria 2924
11 rootL2_10119864 3300003322 Bacteria 3476
12 rootL2_10121862 3300003322 Bacteria 6770
13 Ga0070660_100022750 3300005339 Bacteria 4641
14 Ga0070660_100034305 3300005339 Bacteria 3833
15 Ga0070671_100007404 3300005355 Bacteria 8772
16 Ga0070659_100006048 3300005366 Bacteria 8729
17 Ga0070678_100002112 3300005456 Bacteria 10778
18 Ga0070662_100000043 3300005457 Bacteria 70660
19 Ga0068867_100003386 3300005459 Bacteria 11217
20 Ga0070679_100064559 3300005530 Bacteria 3649
21 Ga0068853_100065717 3300005539 Bacteria 3148
22 Ga0068853_100091065 3300005539 Bacteria 2681
23 Ga0068855_100000021 3300005563 Bacteria 195708
24 Ga0068855_100020828 3300005563 Bacteria 7863
25 Ga0068855_100069342 3300005563 Bacteria 4103
26 Ga0068857_100026439 3300005577 Bacteria 5116
27 Ga0068856_100003916 3300005614 Bacteria 14928
28 Ga0068856_100079252 3300005614 Bacteria 3257
29 Ga0068852_100017631 3300005616 Bacteria 5607
30 Ga0068852_100193628 3300005616 Bacteria 1920
31 Ga0068864_100098148 3300005618 Bacteria 2594
32 Ga0068866_10006139 3300005718 Bacteria 4999
33 Ga0075366_10000345 3300006195 Bacteria 21316
34 Ga0075366_10005435 3300006195 Bacteria 6902
35 Ga0097621_100000069 3300006237 Bacteria 52830
36 Ga0068871_100000649 3300006358 Bacteria 23896
37 Ga0068865_100000098 3300006881 Bacteria 45185
38 Ga0105240_10003052 3300009093 Bacteria 26340
39 Ga0105240_10009770 3300009093 Bacteria 13545
40 Ga0105243_10278039 3300009148 Bacteria 1507
41 Ga0105241_10000641 3300009174 Bacteria 26244
42 Ga0105241_10011602 3300009174 Bacteria 6461
43 Ga0105241_10014012 3300009174 Bacteria 5878
44 Ga0105241_10074160 3300009174 Bacteria 2649
45 Ga0105237_10003936 3300009545 Bacteria 17390
46 Ga0105237_10020311 3300009545 Bacteria 6852
47 Ga0105237_10242032 3300009545 Bacteria 1805
48 Ga0105237_10362972 3300009545 Bacteria 1453
49 Ga0105237_10389617 3300009545 Bacteria 1398
50 Ga0105238_10009373 3300009551 Bacteria 9797
51 Ga0105239_10000008 3300010375 Bacteria 376925
52 Ga0105239_10000045 3300010375 Bacteria 186314
53 Ga0105239_10007846 3300010375 Bacteria 12204
54 Ga0105239_10008855 3300010375 Bacteria 11392
55 Ga0105239_10111206 3300010375 Bacteria 3036
56 Ga0157373_10008166 3300013100 Bacteria 7783
57 Ga0157371_10007225 3300013102 Bacteria 9022
58 Ga0157371_10009185 3300013102 Bacteria 7804
59 Ga0157371_10043453 3300013102 Bacteria 3201
60 Ga0157370_10022319 3300013104 Bacteria 6299
61 Ga0157369_10001337 3300013105 Bacteria 30446
62 Ga0157369_10109057 3300013105 Bacteria 2944
63 Ga0157369_10125377 3300013105 Bacteria 2723
64 Ga0157374_10000360 3300013296 Bacteria 42177
65 Ga0157374_10004643 3300013296 Bacteria 11518
66 Ga0157378_10068857 3300013297 Bacteria 3174
67 Ga0163162_10000013 3300013306 Bacteria 275366
68 Ga0163162_10001108 3300013306 Bacteria 24991
69 Ga0163162_10008405 3300013306 Bacteria 10068
70 Ga0157372_10000677 3300013307 Bacteria 37495
71 Ga0157372_10045289 3300013307 Bacteria 4879
72 Ga0157375_10070931 3300013308 Bacteria 3496
73 Ga0157376_10148065 3300014969 Bacteria 2114
74 Ga0163161_10005678 3300017792 Bacteria 8648
75 Ga0213872_10004758 3300021361 Bacteria 7109
76 Ga0209437_100190 3300025233 Bacteria 125000
77 Ga0207642_10014545 3300025899 Bacteria 2906
78 Ga0207647_10000092 3300025904 Bacteria 68188
79 Ga0207647_10000453 3300025904 Bacteria 33344
80 Ga0207647_10016937 3300025904 Bacteria 4962
81 Ga0207645_10000205 3300025907 Bacteria 48288
82 Ga0207705_10000031 3300025909 Bacteria 228571
83 Ga0207654_10001957 3300025911 Bacteria 10679
84 Ga0207654_10005664 3300025911 Bacteria 6315
85 Ga0207695_10001067 3300025913 Bacteria 47991
86 Ga0207695_10054113 3300025913 Bacteria 4194
87 Ga0207695_10380204 3300025913 Bacteria 1298
88 Ga0207671_10001595 3300025914 Bacteria 25763
89 Ga0207671_10004059 3300025914 Bacteria 14193
90 Ga0207671_10011797 3300025914 Bacteria 7074
91 Ga0207671_10024740 3300025914 Bacteria 4510
92 Ga0207671_10086775 3300025914 Bacteria 2353
93 Ga0207671_10204047 3300025914 Bacteria 1544
94 Ga0207657_10234324 3300025919 Unclassified 1467
95 Ga0207644_10002465 3300025931 Bacteria 11937
96 Ga0207690_10004005 3300025932 Bacteria 8698
97 Ga0207690_10037188 3300025932 Bacteria 3159
98 Ga0207706_10000466 3300025933 Bacteria 43209
99 Ga0207704_10000151 3300025938 Bacteria 37223
100 Ga0207667_10000014 3300025949 Bacteria 421261
101 Ga0207667_10066766 3300025949 Bacteria 3749
102 Ga0207667_10329182 3300025949 Bacteria 1560
103 Ga0207703_10216216 3300026035 Bacteria 1711
104 Ga0207678_10008528 3300026067 Bacteria 9031
105 Ga0207702_10005404 3300026078 Bacteria 11189
106 Ga0207702_10130161 3300026078 Bacteria 2264
107 Ga0207648_10007310 3300026089 Bacteria 10885
108 Ga0207674_10039165 3300026116 Bacteria 4915
109 Ga0207683_10003532 3300026121 Bacteria 13635
110 Ga0207698_10024015 3300026142 Bacteria 4270
111 Ga0268266_10000080 3300028379 Bacteria 210179
112 Ga0307515_10000667 3300028794 Bacteria 79135
113 Ga0307515_10000910 3300028794 Bacteria 68112
114 Ga0307507_10000337 3300033179 Bacteria 95356
115 Ga0307510_10003311 3300033180 Bacteria 18761
116 Ga0395900_0006558 3300037418 Bacteria 12124
117 Ga0395905_0002250 3300037471 Bacteria 21700
118 Ga0395901_0002961 3300038443 Bacteria 17130
119 Ga0436361_0928313 3300039447 Bacteria 7098
120 Ga0451793_1477272 3300041452 Bacteria 1396
121 Ga0439448_0001359 3300042005 Bacteria 6278
122 Ga0453684_0004089 3300044712 Bacteria 31673
123 Ga0495650_0000548 3300046471 Bacteria 53696
124 Ga0495585_0000572 3300046492 Bacteria 34663
125 Ga0495585_0001559 3300046492 Bacteria 17785
126 Ga0495583_0020550 3300046506 Bacteria 3418
127 Ga0495606_0000425 3300046507 Bacteria 70202
128 Ga0495606_0009397 3300046507 Bacteria 8278
129 Ga0495610_0005220 3300046512 Bacteria 9298
130 Ga0495616_0001169 3300046513 Bacteria 18572
131 Ga0495616_0004306 3300046513 Bacteria 8989
132 Ga0495632_0116331 3300046519 Bacteria 1252
133 Ga0495637_0048577 3300046520 Bacteria 1786
134 Ga0495644_0017450 3300046523 Bacteria 2743
135 Ga0495648_0033190 3300046524 Bacteria 3375
136 Ga0495648_0035830 3300046524 Bacteria 3211
137 Ga0495642_0021766 3300046528 Bacteria 2524
138 Ga0495609_0002794 3300046538 Bacteria 10497
139 Ga0495622_0017202 3300046557 Bacteria 3366
140 Ga0495633_0000082 3300046558 Bacteria 125101
141 Ga0495668_0000017 3300046616 Bacteria 434025
142 Ga0495625_0000067 3300046660 Bacteria 171483
143 Ga0495625_0000155 3300046660 Bacteria 105066
144 Ga0495625_0102503 3300046660 Bacteria 1964
145 Ga0495625_0196464 3300046660 Bacteria 1333
146 Ga0495661_0007909 3300046665 Bacteria 7385
147 Ga0495658_0021308 3300046683 Bacteria 3416
148 Ga0495669_0096472 3300046684 Bacteria 1370
149 Ga0495649_0000135 3300046694 Bacteria 64533
150 Ga0495589_0047545 3300046794 Bacteria 2126
151 Ga0495660_0001506 3300046810 Bacteria 15728
152 Ga0495683_0019148 3300047323 Bacteria 3533
153 Ga0495673_0009590 3300047469 Bacteria 5347
154 Ga0495686_0000506 3300047472 Bacteria 56614
155 Ga0495686_0001259 3300047472 Bacteria 28751
156 Ga0495686_0008559 3300047472 Bacteria 7495
157 Ga0495686_0057951 3300047472 Bacteria 2416
158 Ga0495614_0001666 3300048089 Bacteria 9686
159 Ga0495678_012902 3300049459 Bacteria 3940
160 Ga0495682_0006403 3300049460 Bacteria 4764
161 nmdc:mga0k408_158_c1 3300050493 Bacteria 35033
162 nmdc:mga0k408_443_c1 3300050493 Bacteria 22635
163 Ga0500647_0090765 3300053091 Bacteria 1463
164 Ga0500608_003569 3300053122 Bacteria 5860
165 Ga0500618_000015 3300053125 Bacteria 175864
166 Ga0500624_000431 3300053157 Bacteria 12757
167 2599481808 2599185184 Bacteria 6430550
168 2852626537 2852623160 Bacteria 4376875
169 2884934964 2884933994 Bacteria 4535041
170 2919440129 2919437846 Bacteria 6199444
171 2928083959 2928078545 Bacteria 6534839
172 2928152885 2928147474 Bacteria 6512076
173 2932086050 2932082852 Bacteria 6563563
174 Ga0495625_0046101
175 JGI24737J22298_10000179
176 JGI24737J22298_10005055
177 JGI24737J22298_10008690
178 JGI24735J21928_10000033
179 JGI25162J39368_1000088
180 rootH1_10046508
181 rootH2_10000823
182 rootH2_10043869
183 rootH2_10257148
184 rootL2_10119864
185 rootL2_10121862
186 Ga0070660_100022750
187 Ga0070660_100034305
188 Ga0070671_100007404
189 Ga0070659_100006048
190 Ga0070678_100002112
191 Ga0070662_100000043
192 Ga0068867_100003386
193 Ga0070679_100064559
194 Ga0068853_100065717
195 Ga0068853_100091065
196 Ga0068855_100000021
197 Ga0068855_100020828
198 Ga0068855_100069342
199 Ga0068857_100026439
200 Ga0068856_100003916
201 Ga0068856_100079252
202 Ga0068852_100017631
203 Ga0068852_100193628
204 Ga0068864_100098148
205 Ga0068866_10006139
206 Ga0075366_10000345
207 Ga0075366_10005435
208 Ga0097621_100000069
209 Ga0068871_100000649
210 Ga0068865_100000098
211 Ga0105240_10003052
212 Ga0105240_10009770
213 Ga0105243_10278039
214 Ga0105241_10000641
215 Ga0105241_10011602
216 Ga0105241_10014012
217 Ga0105241_10074160
218 Ga0105237_10003936
219 Ga0105237_10020311
220 Ga0105237_10242032
221 Ga0105237_10362972
222 Ga0105237_10389617
223 Ga0105238_10009373
224 Ga0105239_10000008
225 Ga0105239_10000045
226 Ga0105239_10007846
227 Ga0105239_10008855
228 Ga0105239_10111206
229 Ga0157373_10008166
230 Ga0157371_10007225
231 Ga0157371_10009185
232 Ga0157371_10043453
233 Ga0157370_10022319
234 Ga0157369_10001337
235 Ga0157369_10109057
236 Ga0157369_10125377
237 Ga0157374_10000360
238 Ga0157374_10004643
239 Ga0157378_10068857
240 Ga0163162_10000013
241 Ga0163162_10001108
242 Ga0163162_10008405
243 Ga0157372_10000677
244 Ga0157372_10045289
245 Ga0157375_10070931
246 Ga0157376_10148065
247 Ga0163161_10005678
248 Ga0213872_10004758
249 Ga0209437_100190
250 Ga0207642_10014545
251 Ga0207647_10000092
252 Ga0207647_10000453
253 Ga0207647_10016937
254 Ga0207645_10000205
255 Ga0207705_10000031
256 Ga0207654_10001957
257 Ga0207654_10005664
258 Ga0207695_10001067
259 Ga0207695_10054113
260 Ga0207695_10380204
261 Ga0207671_10001595
262 Ga0207671_10004059
263 Ga0207671_10011797
264 Ga0207671_10024740
265 Ga0207671_10086775
266 Ga0207671_10204047
267 Ga0207657_10234324
268 Ga0207644_10002465
269 Ga0207690_10004005
270 Ga0207690_10037188
271 Ga0207706_10000466
272 Ga0207704_10000151
273 Ga0207667_10000014
274 Ga0207667_10066766
275 Ga0207667_10329182
276 Ga0207703_10216216
277 Ga0207678_10008528
278 Ga0207702_10005404
279 Ga0207702_10130161
280 Ga0207648_10007310
281 Ga0207674_10039165
282 Ga0207683_10003532
283 Ga0207698_10024015
284 Ga0268266_10000080
285 Ga0307515_10000667
286 Ga0307515_10000910
287 Ga0307507_10000337
288 Ga0307510_10003311
289 Ga0395900_0006558
290 Ga0395905_0002250
291 Ga0395901_0002961
292 Ga0436361_0928313
293 Ga0451793_1477272
294 Ga0439448_0001359
295 Ga0453684_0004089
296 Ga0495650_0000548
297 Ga0495585_0000572
298 Ga0495585_0001559
299 Ga0495583_0020550
300 Ga0495606_0000425
301 Ga0495606_0009397
302 Ga0495610_0005220
303 Ga0495616_0001169
304 Ga0495616_0004306
305 Ga0495632_0116331
306 Ga0495637_0048577
307 Ga0495644_0017450
308 Ga0495648_0033190
309 Ga0495648_0035830
310 Ga0495642_0021766
311 Ga0495609_0002794
312 Ga0495622_0017202
313 Ga0495633_0000082
314 Ga0495668_0000017
315 Ga0495625_0000067
316 Ga0495625_0000155
317 Ga0495625_0102503
318 Ga0495625_0196464
319 Ga0495661_0007909
320 Ga0495658_0021308
321 Ga0495669_0096472
322 Ga0495649_0000135
323 Ga0495589_0047545
324 Ga0495660_0001506
325 Ga0495683_0019148
326 Ga0495673_0009590
327 Ga0495686_0000506
328 Ga0495686_0001259
329 Ga0495686_0008559
330 Ga0495686_0057951
331 Ga0495614_0001666
332 Ga0495678_012902
333 Ga0495682_0006403
334 nmdc:mga0k408_158_c1
335 nmdc:mga0k408_443_c1
336 Ga0500647_0090765
337 Ga0500608_003569
338 Ga0500618_000015
339 Ga0500624_000431
340 2599481808
341 2852626537
342 2884934964
343 2919440129
344 2928083959
345 2928152885
346 2932086050

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00633

HHH

Helix-hairpin-helix motif

150

179

0.95

PF00730

HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

86

221

0.92

PF14815

NUDIX_4

NUDIX domain

285

399

0.66

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kn9-assembly1.cif.gz_A muty n-terminal domain in complex with dna containing an intrahelical oxog:a base-pair 0.9604 3 219
1kg6-assembly1.cif.gz_A crystal structure of the k142r mutant of e.coli muty (core fragment) 0.9597 2 218
1kg7-assembly1.cif.gz_A crystal structure of the e161a mutant of e.coli muty (core fragment) 0.9594 2 218
1kg3-assembly1.cif.gz_A crystal structure of the core fragment of muty from e.coli at 1.55a resolution 0.9593 2 218
1kg4-assembly1.cif.gz_A crystal structure of the k142a mutant of e. coli muty (core fragment) 0.9589 2 218
ID Description Score Start End Superfamily
1kg2A02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9594 17 128 1.10.340.30
1kg2A02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9511 17 128 1.10.340.30
1rrqA02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9451 17 127 1.10.340.30
af_P9WQ09_31_141_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9423 17 125 1.10.340.30
1rrqA02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9291 17 127 1.10.340.30
ID Description Score Start End GO Terms
AF-A0A563UAW8-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9787 1 348 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-A0A563UAW8-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.976 1 348 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-A0A353Y599-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9731 36 146 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051536
AF-A0A7C2RCT4-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.973 1 208 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-A0A7Z6RB01-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9697 7 135 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051536

Map