F262785

General Info

Members Datasets Scaffolds Average Seq Length
173 111 173 154

Family's Representative Sequence

Representative Sequence 3300025929|Ga0207664_10763727|Ga0207664_107637272
Length 189
Sequence VVIATPPAAKLRWKSISLSPTKPLWLIPSKVAALMMRLRNVAGPRVAEVKAAGVALITEDVAEAVREAGIAEGMVLAAAMHITAAVWINDDEPGIQADALEWLDKLAPPSWQERDGEVARELLPNPGDYRHHRGGENNGDAHLKNLLVHHQVIVPVTEGELDLGPWQQIFYCEFDGRRPKRLVIKVMGE

Samples

Sample ID Description Type Environment
1 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
2 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
3 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
4 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
5 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
6 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
7 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
8 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
9 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
10 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
12 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
13 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
27 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
30 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
42 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
43 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
48 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
49 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
50 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
51 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
52 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
53 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
54 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
55 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
56 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
57 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
58 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
59 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
60 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
66 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
67 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
68 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
69 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
72 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
73 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
74 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
75 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
76 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
77 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
78 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
79 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
80 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
81 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
82 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
83 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
84 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
85 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
86 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
87 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
88 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
89 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
90 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
91 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
92 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
93 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
96 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
97 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
98 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
99 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
100 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
104 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
105 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
106 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
107 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
108 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
109 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
110 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
111 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.31
Nodule 0
Rhizoplane 4.62
Rhizosphere 82.08
Stem 0
Stem Tuber 0
Unclassified 10.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070703_10335275 3300005406 Bacteria 641
2 Ga0070714_101452196 3300005435 Bacteria 670
3 Ga0070705_100141294 3300005440 Bacteria 1585
4 Ga0070707_101249323 3300005468 Bacteria 709
5 Ga0070684_100153518 3300005535 Bacteria 2087
6 Ga0068857_100679326 3300005577 Bacteria 977
7 Ga0068854_100834501 3300005578 Bacteria 806
8 Ga0068859_102680332 3300005617 Bacteria 548
9 Ga0068861_100418891 3300005719 Bacteria 1193
10 Ga0068861_100457476 3300005719 Bacteria 1145
11 Ga0081455_10711749 3300005937 Bacteria 639
12 Ga0081538_10134439 3300005981 Bacteria 1155
13 Ga0075363_100441457 3300006048 Bacteria 768
14 Ga0075364_10391749 3300006051 Bacteria 948
15 Ga0075428_100036696 3300006844 Bacteria 5397
16 Ga0075428_100172414 3300006844 Bacteria 2344
17 Ga0075428_100214428 3300006844 Bacteria 2080
18 Ga0075430_100189092 3300006846 Bacteria 1712
19 Ga0075430_100333642 3300006846 Bacteria 1253
20 Ga0075431_100044007 3300006847 Bacteria 4605
21 Ga0075431_100174999 3300006847 Bacteria 2205
22 Ga0075431_102026344 3300006847 Bacteria 531
23 Ga0075433_10809270 3300006852 Bacteria 819
24 Ga0075429_100332001 3300006880 Bacteria 1331
25 Ga0097620_102680134 3300006931 Bacteria 548
26 Ga0111539_10940479 3300009094 Bacteria 1005
27 Ga0105245_11507325 3300009098 Bacteria 723
28 Ga0105247_10465391 3300009101 Bacteria 914
29 Ga0114129_10219320 3300009147 Bacteria 2567
30 Ga0114129_10255890 3300009147 Bacteria 2349
31 Ga0114129_10269637 3300009147 Bacteria 2278
32 Ga0105243_10542798 3300009148 Bacteria 1109
33 Ga0105242_10990402 3300009176 Bacteria 848
34 Ga0105249_10254403 3300009553 Bacteria 1742
35 Ga0099796_10194856 3300010159 Bacteria 819
36 Ga0105239_11096922 3300010375 Bacteria 916
37 Ga0213873_10022310 3300021358 Bacteria 1498
38 Ga0213873_10086481 3300021358 Bacteria 885
39 Ga0213874_10000392 3300021377 Bacteria 8655
40 Ga0213876_10012303 3300021384 Bacteria 4557
41 Ga0213876_10044624 3300021384 Bacteria 2343
42 Ga0213876_10469492 3300021384 Bacteria 669
43 Ga0207643_10465362 3300025908 Bacteria 806
44 Ga0207693_10910339 3300025915 Bacteria 674
45 Ga0207646_11014774 3300025922 Bacteria 733
46 Ga0207664_10763727 3300025929 Bacteria 869
47 Ga0207664_12003558 3300025929 Bacteria 502
48 Ga0207686_10588205 3300025934 Unclassified 874
49 Ga0207709_10750601 3300025935 Bacteria 784
50 Ga0207640_11019977 3300025981 Bacteria 729
51 Ga0207708_11260610 3300026075 Bacteria 647
52 Ga0207648_10000499 3300026089 Bacteria 43734
53 Ga0207428_10520193 3300027907 Bacteria 863
54 Ga0307405_10149957 3300031731 Bacteria 1638
55 Ga0307413_10147650 3300031824 Bacteria 1634
56 Ga0307410_10167313 3300031852 Bacteria 1653
57 Ga0307407_10101409 3300031903 Bacteria 1787
58 Ga0307409_100009929 3300031995 Bacteria 5880
59 Ga0307409_100225588 3300031995 Bacteria 1694
60 Ga0307409_100889598 3300031995 Bacteria 903
61 Ga0307416_100021687 3300032002 Bacteria 4618
62 Ga0307415_100669810 3300032126 Bacteria 932
63 Ga0307415_101016568 3300032126 Bacteria 771
64 Ga0373944_0183113 3300035089 Bacteria 752
65 Ga0395899_0199475 3300037312 Bacteria 1396
66 Ga0395899_0397425 3300037312 Unclassified 913
67 Ga0395900_0025695 3300037418 Bacteria 6029
68 Ga0395898_0078230 3300037466 Bacteria 3191
69 Ga0395898_0292646 3300037466 Bacteria 1553
70 Ga0395905_0005897 3300037471 Bacteria 12432
71 Ga0436364_0000458 3300037853 Bacteria 1485
72 Ga0436364_0245203 3300037853 Bacteria 1023
73 Ga0436364_0296413 3300037853 Bacteria 567
74 Ga0436364_1330725 3300037853 Bacteria 3019
75 Ga0436364_1557899 3300037853 Bacteria 834
76 Ga0395901_0006616 3300038443 Bacteria 11710
77 Ga0395901_0010354 3300038443 Bacteria 9446
78 Ga0395901_0268127 3300038443 Bacteria 1776
79 Ga0436365_0013991 3300039437 Bacteria 2073
80 Ga0436365_0196698 3300039437 Bacteria 815
81 Ga0436365_0468059 3300039437 Bacteria 5617
82 Ga0436365_0701921 3300039437 Bacteria 1089
83 Ga0436365_0900132 3300039437 Bacteria 3825
84 Ga0436365_1598796 3300039437 Bacteria 1036
85 Ga0436361_0888875 3300039447 Bacteria 739
86 Ga0436363_0032862 3300039450 Bacteria 1603
87 Ga0436363_1173560 3300039450 Bacteria 60217
88 Ga0436363_1615556 3300039450 Bacteria 708
89 Ga0436363_1681809 3300039450 Bacteria 805
90 Ga0436362_0045793 3300039453 Bacteria 714
91 Ga0436362_0326733 3300039453 Bacteria 2559
92 Ga0436362_0346035 3300039453 Bacteria 3405
93 Ga0436362_0906392 3300039453 Bacteria 1198
94 Ga0436362_1093210 3300039453 Bacteria 911
95 Ga0466969_0022863 3300044656 Bacteria 3224
96 Ga0466966_0121101 3300044684 Bacteria 1607
97 Ga0466966_0441824 3300044684 Bacteria 782
98 Ga0466963_0079298 3300044694 Bacteria 2221
99 Ga0466963_0123924 3300044694 Bacteria 1780
100 Ga0466963_0148042 3300044694 Bacteria 1630
101 Ga0466963_0301130 3300044694 Bacteria 1128
102 Ga0466963_0325766 3300044694 Bacteria 1081
103 Ga0466968_0067689 3300044735 Bacteria 1549
104 Ga0466968_0340379 3300044735 Unclassified 727
105 Ga0466970_0318522 3300044765 Bacteria 879
106 Ga0466970_0344838 3300044765 Bacteria 845
107 Ga0466957_0127934 3300044842 Bacteria 1624
108 Ga0466957_0419764 3300044842 Bacteria 917
109 Ga0466957_0437014 3300044842 Bacteria 900
110 Ga0466960_0048274 3300044901 Bacteria 2045
111 Ga0466960_0201721 3300044901 Bacteria 1087
112 Ga0466959_0133460 3300045049 Bacteria 1759
113 Ga0466959_0145886 3300045049 Bacteria 1670
114 Ga0466959_0691428 3300045049 Bacteria 684
115 Ga0466958_0006622 3300045836 Bacteria 6318
116 Ga0466958_0016050 3300045836 Bacteria 4307
117 Ga0466958_0036377 3300045836 Bacteria 2946
118 Ga0466958_0132739 3300045836 Bacteria 1564
119 Ga0495603_0000107 3300046455 Bacteria 39283
120 Ga0495651_0334642 3300046462 Bacteria 1005
121 Ga0495596_0242379 3300046500 Bacteria 700
122 Ga0495620_0112648 3300046515 Archaea 1077
123 Ga0495630_1450443 3300046517 Bacteria 515
124 Ga0495637_0130802 3300046520 Bacteria 959
125 Ga0495645_0017316 3300046543 Bacteria 5161
126 Ga0495667_0767906 3300046559 Bacteria 595
127 Ga0495634_0000111 3300046642 Bacteria 67891
128 Ga0495634_0007754 3300046642 Bacteria 8032
129 Ga0495657_0828571 3300046675 Bacteria 528
130 Ga0495599_0262924 3300046678 Bacteria 1048
131 Ga0495658_0450635 3300046683 Bacteria 822
132 Ga0495669_0031250 3300046684 Bacteria 2339
133 Ga0495600_0206527 3300046809 Bacteria 1260
134 Ga0495581_0340122 3300047315 Bacteria 876
135 Ga0495636_0100200 3300047318 Bacteria 1266
136 Ga0495677_0181758 3300047445 Bacteria 815
137 Ga0495684_0166812 3300047471 Bacteria 1640
138 Ga0495602_0280700 3300048088 Bacteria 1227
139 Ga0496100_0296786 3300048903 Bacteria 1209
140 Ga0496109_0136771 3300048912 Bacteria 2290
141 Ga0496109_1480234 3300048912 Bacteria 614
142 Ga0496110_0298578 3300048913 Bacteria 1467
143 Ga0496112_0234369 3300048915 Bacteria 1790
144 Ga0496112_0301050 3300048915 Bacteria 1549
145 Ga0496113_0265317 3300048916 Bacteria 1372
146 Ga0496113_0589474 3300048916 Bacteria 890
147 Ga0501041_0635355 3300049577 Bacteria 682
148 Ga0501042_0165844 3300049578 Bacteria 1594
149 Ga0501071_1470759 3300049587 Archaea 526
150 Ga0501072_0188568 3300049588 Bacteria 1645
151 Ga0501076_0649370 3300049592 Bacteria 871
152 Ga0501079_0158553 3300049741 Bacteria 1764
153 nmdc:mga00v17_705131_c1 3300050491 Bacteria 647
154 nmdc:mga0yw44_394056_c1 3300050492 Bacteria 936
155 nmdc:mga05p37_160973_c1 3300050507 Bacteria 2741
156 nmdc:mga05p37_915858_c1 3300050507 Bacteria 943
157 nmdc:mga09592_151600_c1 3300050508 Bacteria 2000
158 nmdc:mga0qj67_500196_c1 3300050509 Bacteria 977
159 nmdc:mga06r32_478917_c1 3300050510 Bacteria 1223
160 nmdc:mga06r32_590359_c1 3300050510 Bacteria 1082
161 nmdc:mga08y16_856189_c1 3300050511 Bacteria 898
162 nmdc:mga0rr50_1372713_c1 3300050513 Bacteria 598
163 nmdc:mga0a205_1452502_c1 3300050515 Bacteria 534
164 Ga0495601_0000158 3300053077 Bacteria 37317
165 Ga0495601_0729415 3300053077 Bacteria 631
166 Ga0495612_0001807 3300053078 Bacteria 8762
167 Ga0495612_0001989 3300053078 Bacteria 8414
168 Ga0495655_0033378 3300053083 Bacteria 1266
169 Ga0495655_0110393 3300053083 Unclassified 826
170 Ga0495655_0196985 3300053083 Bacteria 657
171 Ga0495619_0011332 3300053085 Bacteria 5612
172 Ga0495619_0795845 3300053085 Bacteria 640
173 Ga0495619_1061442 3300053085 Bacteria 540

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005406 Ga0070703_10335275 Ga0070703_103352751 153
2 3300005435 Ga0070714_101452196 Ga0070714_1014521962 153
3 3300005440 Ga0070705_100141294 Ga0070705_1001412942 153
4 3300005468 Ga0070707_101249323 Ga0070707_1012493231 153
5 3300005535 Ga0070684_100153518 Ga0070684_1001535181 153
6 3300005577 Ga0068857_100679326 Ga0068857_1006793262 153
7 3300005578 Ga0068854_100834501 Ga0068854_1008345012 153
8 3300005617 Ga0068859_102680332 Ga0068859_1026803321 153
9 3300005719 Ga0068861_100418891 Ga0068861_1004188912 153
10 3300005719 Ga0068861_100457476 Ga0068861_1004574762 153
11 3300005937 Ga0081455_10711749 Ga0081455_107117491 153
12 3300005981 Ga0081538_10134439 Ga0081538_101344392 153
13 3300006048 Ga0075363_100441457 Ga0075363_1004414572 153
14 3300006051 Ga0075364_10391749 Ga0075364_103917491 153
15 3300006844 Ga0075428_100036696 Ga0075428_1000366963 153
16 3300006844 Ga0075428_100172414 Ga0075428_1001724144 153
17 3300006844 Ga0075428_100214428 Ga0075428_1002144282 153
18 3300006846 Ga0075430_100189092 Ga0075430_1001890922 153
19 3300006846 Ga0075430_100333642 Ga0075430_1003336421 153
20 3300006847 Ga0075431_100044007 Ga0075431_1000440075 153
21 3300006847 Ga0075431_100174999 Ga0075431_1001749992 153
22 3300006847 Ga0075431_102026344 Ga0075431_1020263441 153
23 3300006852 Ga0075433_10809270 Ga0075433_108092702 153
24 3300006880 Ga0075429_100332001 Ga0075429_1003320012 153
25 3300006931 Ga0097620_102680134 Ga0097620_1026801341 153
26 3300009094 Ga0111539_10940479 Ga0111539_109404791 153
27 3300009098 Ga0105245_11507325 Ga0105245_115073252 153
28 3300009101 Ga0105247_10465391 Ga0105247_104653912 153
29 3300009147 Ga0114129_10219320 Ga0114129_102193203 153
30 3300009147 Ga0114129_10255890 Ga0114129_102558903 153
31 3300009147 Ga0114129_10269637 Ga0114129_102696373 153
32 3300009148 Ga0105243_10542798 Ga0105243_105427982 153
33 3300009176 Ga0105242_10990402 Ga0105242_109904022 153
34 3300009553 Ga0105249_10254403 Ga0105249_102544033 153
35 3300010159 Ga0099796_10194856 Ga0099796_101948562 153
36 3300010375 Ga0105239_11096922 Ga0105239_110969222 153
37 3300021358 Ga0213873_10022310 Ga0213873_100223103 153
38 3300021358 Ga0213873_10086481 Ga0213873_100864813 153
39 3300021377 Ga0213874_10000392 Ga0213874_100003929 153
40 3300021384 Ga0213876_10012303 Ga0213876_100123037 153
41 3300021384 Ga0213876_10044624 Ga0213876_100446243 153
42 3300021384 Ga0213876_10469492 Ga0213876_104694921 153
43 3300025908 Ga0207643_10465362 Ga0207643_104653622 153
44 3300025915 Ga0207693_10910339 Ga0207693_109103392 153
45 3300025922 Ga0207646_11014774 Ga0207646_110147741 153
46 3300025929 Ga0207664_10763727 Ga0207664_107637272 153
47 3300025929 Ga0207664_12003558 Ga0207664_120035581 153
48 3300025934 Ga0207686_10588205 Ga0207686_105882052 153
49 3300025935 Ga0207709_10750601 Ga0207709_107506012 153
50 3300025981 Ga0207640_11019977 Ga0207640_110199772 153
51 3300026075 Ga0207708_11260610 Ga0207708_112606102 153
52 3300026089 Ga0207648_10000499 Ga0207648_1000049950 153
53 3300027907 Ga0207428_10520193 Ga0207428_105201932 153
54 3300031731 Ga0307405_10149957 Ga0307405_101499572 153
55 3300031824 Ga0307413_10147650 Ga0307413_101476502 153
56 3300031852 Ga0307410_10167313 Ga0307410_101673133 153
57 3300031903 Ga0307407_10101409 Ga0307407_101014093 153
58 3300031995 Ga0307409_100009929 Ga0307409_1000099297 153
59 3300031995 Ga0307409_100225588 Ga0307409_1002255882 153
60 3300031995 Ga0307409_100889598 Ga0307409_1008895982 153
61 3300032002 Ga0307416_100021687 Ga0307416_1000216873 153
62 3300032126 Ga0307415_100669810 Ga0307415_1006698102 153
63 3300032126 Ga0307415_101016568 Ga0307415_1010165682 153
64 3300035089 Ga0373944_0183113 Ga0373944_0183113_55_516 153
65 3300037312 Ga0395899_0199475 Ga0395899_0199475_88_549 153
66 3300037312 Ga0395899_0397425 Ga0395899_0397425_64_525 153
67 3300037418 Ga0395900_0025695 Ga0395900_0025695_3085_3546 153
68 3300037466 Ga0395898_0078230 Ga0395898_0078230_40_501 153
69 3300037466 Ga0395898_0292646 Ga0395898_0292646_899_1360 153
70 3300037471 Ga0395905_0005897 Ga0395905_0005897_2787_3248 153
71 3300037853 Ga0436364_0000458 Ga0436364_0000458_962_1423 153
72 3300037853 Ga0436364_0245203 Ga0436364_0245203_68_529 153
73 3300037853 Ga0436364_0296413 Ga0436364_0296413_30_491 153
74 3300037853 Ga0436364_1330725 Ga0436364_1330725_470_931 153
75 3300037853 Ga0436364_1557899 Ga0436364_1557899_166_627 153
76 3300038443 Ga0395901_0006616 Ga0395901_0006616_2998_3459 153
77 3300038443 Ga0395901_0010354 Ga0395901_0010354_1967_2428 153
78 3300038443 Ga0395901_0268127 Ga0395901_0268127_24_485 153
79 3300039437 Ga0436365_0013991 Ga0436365_0013991_587_1048 153
80 3300039437 Ga0436365_0196698 Ga0436365_0196698_279_740 153
81 3300039437 Ga0436365_0468059 Ga0436365_0468059_4456_4917 153
82 3300039437 Ga0436365_0701921 Ga0436365_0701921_273_815 153
83 3300039437 Ga0436365_0900132 Ga0436365_0900132_683_1144 153
84 3300039437 Ga0436365_1598796 Ga0436365_1598796_194_655 153
85 3300039447 Ga0436361_0888875 Ga0436361_0888875_163_624 153
86 3300039450 Ga0436363_0032862 Ga0436363_0032862_104_565 153
87 3300039450 Ga0436363_1173560 Ga0436363_1173560_4903_5364 153
88 3300039450 Ga0436363_1615556 Ga0436363_1615556_185_655 153
89 3300039450 Ga0436363_1681809 Ga0436363_1681809_134_595 153
90 3300039453 Ga0436362_0045793 Ga0436362_0045793_230_691 153
91 3300039453 Ga0436362_0326733 Ga0436362_0326733_1735_2277 153
92 3300039453 Ga0436362_0346035 Ga0436362_0346035_31_492 153
93 3300039453 Ga0436362_0906392 Ga0436362_0906392_455_916 153
94 3300039453 Ga0436362_1093210 Ga0436362_1093210_175_636 153
95 3300044656 Ga0466969_0022863 Ga0466969_0022863_1973_2434 153
96 3300044684 Ga0466966_0121101 Ga0466966_0121101_93_554 153
97 3300044684 Ga0466966_0441824 Ga0466966_0441824_141_602 153
98 3300044694 Ga0466963_0079298 Ga0466963_0079298_950_1420 153
99 3300044694 Ga0466963_0123924 Ga0466963_0123924_1093_1554 153
100 3300044694 Ga0466963_0148042 Ga0466963_0148042_39_500 153
101 3300044694 Ga0466963_0301130 Ga0466963_0301130_67_567 153
102 3300044694 Ga0466963_0325766 Ga0466963_0325766_324_785 153
103 3300044735 Ga0466968_0067689 Ga0466968_0067689_831_1292 153
104 3300044735 Ga0466968_0340379 Ga0466968_0340379_37_504 153
105 3300044765 Ga0466970_0318522 Ga0466970_0318522_281_742 153
106 3300044765 Ga0466970_0344838 Ga0466970_0344838_335_805 153
107 3300044842 Ga0466957_0127934 Ga0466957_0127934_803_1273 153
108 3300044842 Ga0466957_0419764 Ga0466957_0419764_223_684 153
109 3300044842 Ga0466957_0437014 Ga0466957_0437014_139_600 153
110 3300044901 Ga0466960_0048274 Ga0466960_0048274_719_1180 153
111 3300044901 Ga0466960_0201721 Ga0466960_0201721_209_670 153
112 3300045049 Ga0466959_0133460 Ga0466959_0133460_1048_1509 153
113 3300045049 Ga0466959_0145886 Ga0466959_0145886_212_682 153
114 3300045049 Ga0466959_0691428 Ga0466959_0691428_169_630 153
115 3300045836 Ga0466958_0006622 Ga0466958_0006622_2494_2955 153
116 3300045836 Ga0466958_0016050 Ga0466958_0016050_2150_2611 153
117 3300045836 Ga0466958_0036377 Ga0466958_0036377_469_930 153
118 3300045836 Ga0466958_0132739 Ga0466958_0132739_11_481 153
119 3300046455 Ga0495603_0000107 Ga0495603_0000107_16570_17031 153
120 3300046462 Ga0495651_0334642 Ga0495651_0334642_68_529 153
121 3300046500 Ga0495596_0242379 Ga0495596_0242379_14_475 153
122 3300046515 Ga0495620_0112648 Ga0495620_0112648_434_895 153
123 3300046517 Ga0495630_1450443 Ga0495630_1450443_22_483 153
124 3300046520 Ga0495637_0130802 Ga0495637_0130802_224_685 153
125 3300046543 Ga0495645_0017316 Ga0495645_0017316_1271_1732 153
126 3300046559 Ga0495667_0767906 Ga0495667_0767906_110_571 153
127 3300046642 Ga0495634_0000111 Ga0495634_0000111_13971_14432 153
128 3300046642 Ga0495634_0007754 Ga0495634_0007754_6966_7427 153
129 3300046675 Ga0495657_0828571 Ga0495657_0828571_37_498 153
130 3300046678 Ga0495599_0262924 Ga0495599_0262924_160_621 153
131 3300046683 Ga0495658_0450635 Ga0495658_0450635_61_522 153
132 3300046684 Ga0495669_0031250 Ga0495669_0031250_432_893 153
133 3300046809 Ga0495600_0206527 Ga0495600_0206527_623_1084 153
134 3300047315 Ga0495581_0340122 Ga0495581_0340122_45_506 153
135 3300047318 Ga0495636_0100200 Ga0495636_0100200_118_579 153
136 3300047445 Ga0495677_0181758 Ga0495677_0181758_200_661 153
137 3300047471 Ga0495684_0166812 Ga0495684_0166812_614_1075 153
138 3300048088 Ga0495602_0280700 Ga0495602_0280700_646_1107 153
139 3300048903 Ga0496100_0296786 Ga0496100_0296786_199_660 153
140 3300048912 Ga0496109_0136771 Ga0496109_0136771_579_1040 153
141 3300048912 Ga0496109_1480234 Ga0496109_1480234_131_592 153
142 3300048913 Ga0496110_0298578 Ga0496110_0298578_464_925 153
143 3300048915 Ga0496112_0234369 Ga0496112_0234369_940_1401 153
144 3300048915 Ga0496112_0301050 Ga0496112_0301050_1067_1528 153
145 3300048916 Ga0496113_0265317 Ga0496113_0265317_80_541 153
146 3300048916 Ga0496113_0589474 Ga0496113_0589474_295_756 153
147 3300049577 Ga0501041_0635355 Ga0501041_0635355_16_477 153
148 3300049578 Ga0501042_0165844 Ga0501042_0165844_1093_1554 153
149 3300049587 Ga0501071_1470759 Ga0501071_1470759_39_500 153
150 3300049588 Ga0501072_0188568 Ga0501072_0188568_79_540 153
151 3300049592 Ga0501076_0649370 Ga0501076_0649370_306_767 153
152 3300049741 Ga0501079_0158553 Ga0501079_0158553_326_787 153
153 3300050491 nmdc:mga00v17_705131_c1 nmdc:mga00v17_705131_c1_53_514 153
154 3300050492 nmdc:mga0yw44_394056_c1 nmdc:mga0yw44_394056_c1_450_911 153
155 3300050507 nmdc:mga05p37_160973_c1 nmdc:mga05p37_160973_c1_1306_1767 153
156 3300050507 nmdc:mga05p37_915858_c1 nmdc:mga05p37_915858_c1_46_507 153
157 3300050508 nmdc:mga09592_151600_c1 nmdc:mga09592_151600_c1_1044_1505 153
158 3300050509 nmdc:mga0qj67_500196_c1 nmdc:mga0qj67_500196_c1_126_587 153
159 3300050510 nmdc:mga06r32_478917_c1 nmdc:mga06r32_478917_c1_215_676 153
160 3300050510 nmdc:mga06r32_590359_c1 nmdc:mga06r32_590359_c1_403_864 153
161 3300050511 nmdc:mga08y16_856189_c1 nmdc:mga08y16_856189_c1_373_834 153
162 3300050513 nmdc:mga0rr50_1372713_c1 nmdc:mga0rr50_1372713_c1_48_509 153
163 3300050515 nmdc:mga0a205_1452502_c1 nmdc:mga0a205_1452502_c1_12_473 153
164 3300053077 Ga0495601_0000158 Ga0495601_0000158_594_1055 153
165 3300053077 Ga0495601_0729415 Ga0495601_0729415_73_534 153
166 3300053078 Ga0495612_0001807 Ga0495612_0001807_4307_4768 153
167 3300053078 Ga0495612_0001989 Ga0495612_0001989_3705_4166 153
168 3300053083 Ga0495655_0033378 Ga0495655_0033378_633_1094 153
169 3300053083 Ga0495655_0110393 Ga0495655_0110393_253_714 153
170 3300053083 Ga0495655_0196985 Ga0495655_0196985_168_629 153
171 3300053085 Ga0495619_0011332 Ga0495619_0011332_4785_5246 153
172 3300053085 Ga0495619_0795845 Ga0495619_0795845_67_528 153
173 3300053085 Ga0495619_1061442 Ga0495619_1061442_57_518 153

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01894

UPF0047

Uncharacterised protein family UPF0047

56

186

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2p6c-assembly1.cif.gz_A crystal structure of hypothetical protein aq_2013 from aquifex aeolicus vf5. 0.9049 1 153
1xbf-assembly1.cif.gz_C x-ray structure northeast structural genomics consortium target car10 from c. acetobutylicum 0.8998 5 151
2p6c-assembly1.cif.gz_A crystal structure of hypothetical protein aq_2013 from aquifex aeolicus vf5. 0.8987 1 153
1xbf-assembly1.cif.gz_C x-ray structure northeast structural genomics consortium target car10 from c. acetobutylicum 0.879 5 151
1vmj-assembly1.cif.gz_A crystal structure of a putative thiamin phosphate synthase (tm0723) from thermotoga maritima msb8 at 1.52 a resolution 0.8674 1 153
ID Description Score Start End Superfamily
2p6cB00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.9053 1 153 2.60.120.460
2p6cB00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.899 1 153 2.60.120.460
1xbfB00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.8641 6 151 2.60.120.460
1xbfB00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.8453 6 151 2.60.120.460
1ve0A00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.8364 2 153 2.60.120.460
ID Description Score Start End GO Terms
AF-A0A1L6L9R6-F1-model_v4 deleted 0.9168 2 153
AF-H2J4V7-F1-model_v4 Secondary thiamine-phosphate synthase enzyme 0.9104 2 152
AF-A0A7V8WEF2-F1-model_v4 YjbQ family protein 0.9067 3 153
AF-A0A0S4KUV3-F1-model_v4 Secondary thiamine-phosphate synthase enzyme 0.905 2 153
AF-A0A1S6H6N0-F1-model_v4 Secondary thiamine-phosphate synthase enzyme 0.9049 1 153

Feature Viewer

pLDDT pTM Quality
82.16 0.76 High
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Predicted Structure (AlphaFold2)

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