F262715
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 173 | 99 | 346 | 145 |
Family's Representative Sequence
| Representative Sequence | 3300021384|Ga0213876_10169469|Ga0213876_101694692 |
| Length | 172 |
| Sequence | LPDGGDCATLPSVPARSELERMVRSAALRVTRPRVAVLSAVHAHPHADTDSIIRVVRESLGDVSHQAVYDVLRALTDVGLVRRIQPAGSVARYEARVSDNHHHVVCRSCGAIADVDCAVGHAPCLTAADDSGYAVDEAEVIYWGRCRACRADLGHTSEPNQETARQEKDRRV |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 2 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 3 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 5 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 7 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 8 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 9 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 10 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 11 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 12 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 13 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 14 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 15 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 16 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 17 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 18 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 20 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 21 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 22 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 25 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 26 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 27 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 28 | 3300030733 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 | Metagenome | Rhizosphere |
| 29 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 30 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 31 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 32 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 33 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 34 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 35 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 36 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 37 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 38 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 39 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 40 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 41 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 42 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 43 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 44 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 45 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 46 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 47 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 48 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 49 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 50 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 51 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 52 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 53 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 54 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 55 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 56 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 57 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 58 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 59 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 60 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 61 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 62 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 63 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 64 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 65 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 66 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 67 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 68 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 69 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 70 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 71 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 72 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 73 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 74 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 75 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 76 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 77 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 78 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 79 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 80 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 81 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 82 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 83 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 84 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 85 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 86 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 87 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 88 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 89 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 90 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 91 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 92 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 93 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 94 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 95 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 96 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 97 | 2861520306 | Phytomonospora endophytica DSM 45386 | Isolate | Unclassified |
| 98 | 2868088558 | Phytoactinopolyspora endophytica EGI 60009 | Isolate | Unclassified |
| 99 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.38 |
| Metatranscriptomes | 2.89 |
| Isolates | 1.73 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.05 |
| Nodule | 0 |
| Rhizoplane | 5.78 |
| Rhizosphere | 84.39 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0213876_10169469 | 3300021384 | Bacteria | 1161 |
| 2 | rootH1_10004757 | 3300003316 | Bacteria | 2125 |
| 3 | Ga0070678_100972030 | 3300005456 | Bacteria | 779 |
| 4 | Ga0081455_10216624 | 3300005937 | Bacteria | 1422 |
| 5 | Ga0070717_10175440 | 3300006028 | Bacteria | 1866 |
| 6 | Ga0075365_10364503 | 3300006038 | Bacteria | 1019 |
| 7 | Ga0075363_100019916 | 3300006048 | Bacteria | 3359 |
| 8 | Ga0075364_10159613 | 3300006051 | Bacteria | 1522 |
| 9 | Ga0075370_10023491 | 3300006353 | Bacteria | 3396 |
| 10 | Ga0111539_11653131 | 3300009094 | Bacteria | 743 |
| 11 | Ga0111539_12085538 | 3300009094 | Bacteria | 658 |
| 12 | Ga0105245_10340116 | 3300009098 | Bacteria | 1484 |
| 13 | Ga0157369_10059015 | 3300013105 | Bacteria | 4138 |
| 14 | Ga0157372_10772184 | 3300013307 | Bacteria | 1117 |
| 15 | Ga0157372_10855133 | 3300013307 | Bacteria | 1056 |
| 16 | Ga0197907_11480787 | 3300020069 | Bacteria | 2939 |
| 17 | Ga0206350_10651649 | 3300020080 | Bacteria | 1787 |
| 18 | Ga0206353_10162774 | 3300020082 | Bacteria | 1915 |
| 19 | Ga0206353_10278714 | 3300020082 | Bacteria | 2852 |
| 20 | Ga0224712_10009664 | 3300022467 | Bacteria | 2917 |
| 21 | Ga0207647_10043721 | 3300025904 | Bacteria | 2801 |
| 22 | Ga0207705_10507450 | 3300025909 | Bacteria | 937 |
| 23 | Ga0207663_10930552 | 3300025916 | Bacteria | 696 |
| 24 | Ga0207652_10133841 | 3300025921 | Bacteria | 2212 |
| 25 | Ga0207687_10667371 | 3300025927 | Bacteria | 880 |
| 26 | Ga0207700_10114787 | 3300025928 | Bacteria | 2173 |
| 27 | Ga0307515_10130079 | 3300028794 | Bacteria | 2780 |
| 28 | Ga0307511_10000444 | 3300030521 | Bacteria | 44383 |
| 29 | Ga0316177_1122575 | 3300030731 | Bacteria | 1362 |
| 30 | Ga0316176_1130274 | 3300030732 | Bacteria | 4003 |
| 31 | Ga0314311_1001375 | 3300030733 | Bacteria | 2750 |
| 32 | Ga0307413_12148790 | 3300031824 | Bacteria | 505 |
| 33 | Ga0307410_10277853 | 3300031852 | Bacteria | 1313 |
| 34 | Ga0307409_100137408 | 3300031995 | Bacteria | 2100 |
| 35 | Ga0307416_100267426 | 3300032002 | Bacteria | 1676 |
| 36 | Ga0373932_0350067 | 3300035112 | Bacteria | 562 |
| 37 | Ga0373927_0151814 | 3300035695 | Bacteria | 1517 |
| 38 | Ga0436365_0315894 | 3300039437 | Bacteria | 1445 |
| 39 | Ga0436365_0871708 | 3300039437 | Bacteria | 517 |
| 40 | Ga0466966_0052930 | 3300044684 | Bacteria | 2577 |
| 41 | Ga0466966_0087865 | 3300044684 | Bacteria | 1932 |
| 42 | Ga0466966_0214289 | 3300044684 | Bacteria | 1163 |
| 43 | Ga0466961_0028735 | 3300044693 | Bacteria | 3576 |
| 44 | Ga0466961_0028853 | 3300044693 | Bacteria | 3568 |
| 45 | Ga0466961_0517063 | 3300044693 | Bacteria | 720 |
| 46 | Ga0466961_0554968 | 3300044693 | Bacteria | 692 |
| 47 | Ga0466963_0001412 | 3300044694 | Bacteria | 12910 |
| 48 | Ga0466963_0207709 | 3300044694 | Bacteria | 1370 |
| 49 | Ga0466964_0290701 | 3300044706 | Bacteria | 820 |
| 50 | Ga0466971_0044461 | 3300044719 | Bacteria | 1994 |
| 51 | Ga0466971_0063370 | 3300044719 | Bacteria | 1673 |
| 52 | Ga0466968_0107066 | 3300044735 | Bacteria | 1254 |
| 53 | Ga0466970_0056372 | 3300044765 | Bacteria | 2100 |
| 54 | Ga0466970_0165705 | 3300044765 | Bacteria | 1223 |
| 55 | Ga0466970_0366352 | 3300044765 | Bacteria | 819 |
| 56 | Ga0466957_0000921 | 3300044842 | Bacteria | 15064 |
| 57 | Ga0466957_0239183 | 3300044842 | Bacteria | 1204 |
| 58 | Ga0466960_0004303 | 3300044901 | Bacteria | 5550 |
| 59 | Ga0466960_0068137 | 3300044901 | Bacteria | 1764 |
| 60 | Ga0466960_0413069 | 3300044901 | Bacteria | 779 |
| 61 | Ga0466959_0020629 | 3300045049 | Bacteria | 4856 |
| 62 | Ga0466959_0036895 | 3300045049 | Bacteria | 3611 |
| 63 | Ga0466959_0111418 | 3300045049 | Bacteria | 1952 |
| 64 | Ga0466959_0200284 | 3300045049 | Bacteria | 1390 |
| 65 | Ga0466958_0000321 | 3300045836 | Bacteria | 19095 |
| 66 | Ga0466958_0013606 | 3300045836 | Bacteria | 4636 |
| 67 | Ga0466958_0398681 | 3300045836 | Bacteria | 888 |
| 68 | Ga0466967_0004268 | 3300045976 | Bacteria | 9604 |
| 69 | Ga0466967_0358104 | 3300045976 | Bacteria | 1413 |
| 70 | Ga0495650_0064660 | 3300046471 | Bacteria | 1454 |
| 71 | Ga0495639_0065305 | 3300046475 | Bacteria | 1674 |
| 72 | Ga0496101_0555229 | 3300048904 | Bacteria | 908 |
| 73 | Ga0496102_1214687 | 3300048905 | Bacteria | 673 |
| 74 | Ga0496103_0120569 | 3300048906 | Bacteria | 1670 |
| 75 | Ga0496104_0494852 | 3300048907 | Bacteria | 1134 |
| 76 | Ga0496106_0240368 | 3300048909 | Bacteria | 1447 |
| 77 | Ga0496108_0017402 | 3300048911 | Bacteria | 5882 |
| 78 | Ga0496108_1361406 | 3300048911 | Bacteria | 595 |
| 79 | Ga0496109_0092713 | 3300048912 | Bacteria | 2794 |
| 80 | Ga0496110_0177364 | 3300048913 | Bacteria | 1934 |
| 81 | Ga0496111_0211533 | 3300048914 | Bacteria | 1440 |
| 82 | Ga0496119_0000117 | 3300048922 | Bacteria | 111102 |
| 83 | Ga0496120_0008950 | 3300048923 | Bacteria | 7166 |
| 84 | Ga0501031_0005801 | 3300049568 | Bacteria | 8047 |
| 85 | Ga0501031_0023250 | 3300049568 | Bacteria | 4041 |
| 86 | Ga0501031_0369199 | 3300049568 | Bacteria | 928 |
| 87 | Ga0501032_0003179 | 3300049569 | Bacteria | 12641 |
| 88 | Ga0501032_0017762 | 3300049569 | Bacteria | 4992 |
| 89 | Ga0501033_0012959 | 3300049570 | Bacteria | 6359 |
| 90 | Ga0501033_0378407 | 3300049570 | Bacteria | 989 |
| 91 | Ga0501034_0196958 | 3300049571 | Bacteria | 1974 |
| 92 | Ga0501034_0240249 | 3300049571 | Bacteria | 1757 |
| 93 | Ga0501036_0016450 | 3300049572 | Bacteria | 6177 |
| 94 | Ga0501036_0027444 | 3300049572 | Bacteria | 4810 |
| 95 | Ga0501036_0079450 | 3300049572 | Bacteria | 2774 |
| 96 | Ga0501036_0980501 | 3300049572 | Bacteria | 692 |
| 97 | Ga0501037_0017208 | 3300049573 | Bacteria | 5321 |
| 98 | Ga0501038_0007096 | 3300049574 | Bacteria | 10347 |
| 99 | Ga0501038_0012970 | 3300049574 | Bacteria | 7603 |
| 100 | Ga0501038_0395952 | 3300049574 | Bacteria | 1069 |
| 101 | Ga0501038_0402433 | 3300049574 | Bacteria | 1059 |
| 102 | Ga0501039_0014255 | 3300049575 | Bacteria | 6086 |
| 103 | Ga0501039_0028835 | 3300049575 | Bacteria | 4274 |
| 104 | Ga0501039_0065639 | 3300049575 | Bacteria | 2816 |
| 105 | Ga0501041_0055999 | 3300049577 | Bacteria | 2408 |
| 106 | Ga0501041_0894141 | 3300049577 | Bacteria | 570 |
| 107 | Ga0501042_0011256 | 3300049578 | Bacteria | 6030 |
| 108 | Ga0501042_0140071 | 3300049578 | Bacteria | 1744 |
| 109 | Ga0501042_0207019 | 3300049578 | Bacteria | 1414 |
| 110 | Ga0501043_0006011 | 3300049579 | Bacteria | 9762 |
| 111 | Ga0501043_0072205 | 3300049579 | Bacteria | 2711 |
| 112 | Ga0501046_0022696 | 3300049580 | Bacteria | 5168 |
| 113 | Ga0501046_0598660 | 3300049580 | Bacteria | 782 |
| 114 | Ga0501047_0008509 | 3300049581 | Bacteria | 9678 |
| 115 | Ga0501047_0037951 | 3300049581 | Bacteria | 4659 |
| 116 | Ga0501048_0000641 | 3300049582 | Bacteria | 25078 |
| 117 | Ga0501048_0023205 | 3300049582 | Bacteria | 4536 |
| 118 | Ga0501048_0123916 | 3300049582 | Bacteria | 1827 |
| 119 | Ga0501067_0015699 | 3300049583 | Bacteria | 4190 |
| 120 | Ga0501067_0144933 | 3300049583 | Bacteria | 1323 |
| 121 | Ga0501068_0007621 | 3300049584 | Bacteria | 5991 |
| 122 | Ga0501069_0026705 | 3300049585 | Bacteria | 3162 |
| 123 | Ga0501069_0064943 | 3300049585 | Bacteria | 2040 |
| 124 | Ga0501069_0343796 | 3300049585 | Bacteria | 879 |
| 125 | Ga0501070_0026752 | 3300049586 | Bacteria | 4838 |
| 126 | Ga0501070_0038780 | 3300049586 | Bacteria | 3975 |
| 127 | Ga0501070_0360045 | 3300049586 | Bacteria | 1180 |
| 128 | Ga0501070_0410629 | 3300049586 | Bacteria | 1094 |
| 129 | Ga0501071_0015701 | 3300049587 | Bacteria | 5200 |
| 130 | Ga0501071_0117162 | 3300049587 | Bacteria | 1972 |
| 131 | Ga0501071_0291433 | 3300049587 | Bacteria | 1236 |
| 132 | Ga0501072_0043309 | 3300049588 | Bacteria | 3537 |
| 133 | Ga0501072_0056231 | 3300049588 | Bacteria | 3101 |
| 134 | Ga0501073_0018260 | 3300049589 | Bacteria | 5067 |
| 135 | Ga0501073_0165476 | 3300049589 | Bacteria | 1531 |
| 136 | Ga0501073_0418362 | 3300049589 | Bacteria | 926 |
| 137 | Ga0501074_0016024 | 3300049590 | Bacteria | 5447 |
| 138 | Ga0501074_0115442 | 3300049590 | Bacteria | 1921 |
| 139 | Ga0501074_0242170 | 3300049590 | Bacteria | 1283 |
| 140 | Ga0501076_0063732 | 3300049592 | Bacteria | 2937 |
| 141 | Ga0501076_0261089 | 3300049592 | Bacteria | 1418 |
| 142 | Ga0501077_0563474 | 3300049593 | Bacteria | 731 |
| 143 | Ga0501077_0667206 | 3300049593 | Bacteria | 668 |
| 144 | Ga0501079_0037369 | 3300049741 | Bacteria | 3743 |
| 145 | Ga0501079_0173905 | 3300049741 | Bacteria | 1679 |
| 146 | Ga0501079_0256696 | 3300049741 | Bacteria | 1366 |
| 147 | Ga0501080_0097014 | 3300049742 | Bacteria | 2737 |
| 148 | Ga0501080_0147984 | 3300049742 | Bacteria | 2171 |
| 149 | Ga0501080_0502647 | 3300049742 | Bacteria | 1083 |
| 150 | Ga0501083_0014190 | 3300049744 | Bacteria | 5572 |
| 151 | Ga0501035_0015793 | 3300049822 | Bacteria | 6969 |
| 152 | Ga0501035_0024099 | 3300049822 | Bacteria | 5583 |
| 153 | Ga0501035_0281384 | 3300049822 | Bacteria | 1406 |
| 154 | Ga0501035_0652241 | 3300049822 | Bacteria | 853 |
| 155 | Ga0501035_0684502 | 3300049822 | Bacteria | 828 |
| 156 | Ga0501044_0016528 | 3300049823 | Bacteria | 7920 |
| 157 | Ga0501044_0017323 | 3300049823 | Bacteria | 7726 |
| 158 | Ga0501044_0053714 | 3300049823 | Bacteria | 4144 |
| 159 | Ga0501044_0486197 | 3300049823 | Bacteria | 1137 |
| 160 | Ga0501045_0138453 | 3300049824 | Bacteria | 1810 |
| 161 | nmdc:mga03n38_5667_c1 | 3300050490 | Bacteria | 4274 |
| 162 | nmdc:mga00v17_12128_c1 | 3300050491 | Bacteria | 4749 |
| 163 | nmdc:mga00v17_82871_c1 | 3300050491 | Bacteria | 2005 |
| 164 | Ga0501084_0354151 | 3300054114 | Bacteria | 1240 |
| 165 | Ga0501082_0016400 | 3300060353 | Bacteria | 6377 |
| 166 | Ga0501082_0326082 | 3300060353 | Bacteria | 1338 |
| 167 | Ga0501082_0501957 | 3300060353 | Bacteria | 1060 |
| 168 | Ga0466962_0031518 | 3300061719 | Bacteria | 2538 |
| 169 | Ga0466962_0046574 | 3300061719 | Bacteria | 2072 |
| 170 | Ga0530510_0027964 | 3300061734 | Bacteria | 4042 |
| 171 | 2861522497 | 2861520306 | Bacteria | 8348283 |
| 172 | 2868091047 | 2868088558 | Bacteria | 7609351 |
| 173 | 8056210173 | 8056207758 | Bacteria | 8639239 |
| 174 | Ga0213876_10169469 | |||
| 175 | rootH1_10004757 | |||
| 176 | Ga0070678_100972030 | |||
| 177 | Ga0081455_10216624 | |||
| 178 | Ga0070717_10175440 | |||
| 179 | Ga0075365_10364503 | |||
| 180 | Ga0075363_100019916 | |||
| 181 | Ga0075364_10159613 | |||
| 182 | Ga0075370_10023491 | |||
| 183 | Ga0111539_11653131 | |||
| 184 | Ga0111539_12085538 | |||
| 185 | Ga0105245_10340116 | |||
| 186 | Ga0157369_10059015 | |||
| 187 | Ga0157372_10772184 | |||
| 188 | Ga0157372_10855133 | |||
| 189 | Ga0197907_11480787 | |||
| 190 | Ga0206350_10651649 | |||
| 191 | Ga0206353_10162774 | |||
| 192 | Ga0206353_10278714 | |||
| 193 | Ga0224712_10009664 | |||
| 194 | Ga0207647_10043721 | |||
| 195 | Ga0207705_10507450 | |||
| 196 | Ga0207663_10930552 | |||
| 197 | Ga0207652_10133841 | |||
| 198 | Ga0207687_10667371 | |||
| 199 | Ga0207700_10114787 | |||
| 200 | Ga0307515_10130079 | |||
| 201 | Ga0307511_10000444 | |||
| 202 | Ga0316177_1122575 | |||
| 203 | Ga0316176_1130274 | |||
| 204 | Ga0314311_1001375 | |||
| 205 | Ga0307413_12148790 | |||
| 206 | Ga0307410_10277853 | |||
| 207 | Ga0307409_100137408 | |||
| 208 | Ga0307416_100267426 | |||
| 209 | Ga0373932_0350067 | |||
| 210 | Ga0373927_0151814 | |||
| 211 | Ga0436365_0315894 | |||
| 212 | Ga0436365_0871708 | |||
| 213 | Ga0466966_0052930 | |||
| 214 | Ga0466966_0087865 | |||
| 215 | Ga0466966_0214289 | |||
| 216 | Ga0466961_0028735 | |||
| 217 | Ga0466961_0028853 | |||
| 218 | Ga0466961_0517063 | |||
| 219 | Ga0466961_0554968 | |||
| 220 | Ga0466963_0001412 | |||
| 221 | Ga0466963_0207709 | |||
| 222 | Ga0466964_0290701 | |||
| 223 | Ga0466971_0044461 | |||
| 224 | Ga0466971_0063370 | |||
| 225 | Ga0466968_0107066 | |||
| 226 | Ga0466970_0056372 | |||
| 227 | Ga0466970_0165705 | |||
| 228 | Ga0466970_0366352 | |||
| 229 | Ga0466957_0000921 | |||
| 230 | Ga0466957_0239183 | |||
| 231 | Ga0466960_0004303 | |||
| 232 | Ga0466960_0068137 | |||
| 233 | Ga0466960_0413069 | |||
| 234 | Ga0466959_0020629 | |||
| 235 | Ga0466959_0036895 | |||
| 236 | Ga0466959_0111418 | |||
| 237 | Ga0466959_0200284 | |||
| 238 | Ga0466958_0000321 | |||
| 239 | Ga0466958_0013606 | |||
| 240 | Ga0466958_0398681 | |||
| 241 | Ga0466967_0004268 | |||
| 242 | Ga0466967_0358104 | |||
| 243 | Ga0495650_0064660 | |||
| 244 | Ga0495639_0065305 | |||
| 245 | Ga0496101_0555229 | |||
| 246 | Ga0496102_1214687 | |||
| 247 | Ga0496103_0120569 | |||
| 248 | Ga0496104_0494852 | |||
| 249 | Ga0496106_0240368 | |||
| 250 | Ga0496108_0017402 | |||
| 251 | Ga0496108_1361406 | |||
| 252 | Ga0496109_0092713 | |||
| 253 | Ga0496110_0177364 | |||
| 254 | Ga0496111_0211533 | |||
| 255 | Ga0496119_0000117 | |||
| 256 | Ga0496120_0008950 | |||
| 257 | Ga0501031_0005801 | |||
| 258 | Ga0501031_0023250 | |||
| 259 | Ga0501031_0369199 | |||
| 260 | Ga0501032_0003179 | |||
| 261 | Ga0501032_0017762 | |||
| 262 | Ga0501033_0012959 | |||
| 263 | Ga0501033_0378407 | |||
| 264 | Ga0501034_0196958 | |||
| 265 | Ga0501034_0240249 | |||
| 266 | Ga0501036_0016450 | |||
| 267 | Ga0501036_0027444 | |||
| 268 | Ga0501036_0079450 | |||
| 269 | Ga0501036_0980501 | |||
| 270 | Ga0501037_0017208 | |||
| 271 | Ga0501038_0007096 | |||
| 272 | Ga0501038_0012970 | |||
| 273 | Ga0501038_0395952 | |||
| 274 | Ga0501038_0402433 | |||
| 275 | Ga0501039_0014255 | |||
| 276 | Ga0501039_0028835 | |||
| 277 | Ga0501039_0065639 | |||
| 278 | Ga0501041_0055999 | |||
| 279 | Ga0501041_0894141 | |||
| 280 | Ga0501042_0011256 | |||
| 281 | Ga0501042_0140071 | |||
| 282 | Ga0501042_0207019 | |||
| 283 | Ga0501043_0006011 | |||
| 284 | Ga0501043_0072205 | |||
| 285 | Ga0501046_0022696 | |||
| 286 | Ga0501046_0598660 | |||
| 287 | Ga0501047_0008509 | |||
| 288 | Ga0501047_0037951 | |||
| 289 | Ga0501048_0000641 | |||
| 290 | Ga0501048_0023205 | |||
| 291 | Ga0501048_0123916 | |||
| 292 | Ga0501067_0015699 | |||
| 293 | Ga0501067_0144933 | |||
| 294 | Ga0501068_0007621 | |||
| 295 | Ga0501069_0026705 | |||
| 296 | Ga0501069_0064943 | |||
| 297 | Ga0501069_0343796 | |||
| 298 | Ga0501070_0026752 | |||
| 299 | Ga0501070_0038780 | |||
| 300 | Ga0501070_0360045 | |||
| 301 | Ga0501070_0410629 | |||
| 302 | Ga0501071_0015701 | |||
| 303 | Ga0501071_0117162 | |||
| 304 | Ga0501071_0291433 | |||
| 305 | Ga0501072_0043309 | |||
| 306 | Ga0501072_0056231 | |||
| 307 | Ga0501073_0018260 | |||
| 308 | Ga0501073_0165476 | |||
| 309 | Ga0501073_0418362 | |||
| 310 | Ga0501074_0016024 | |||
| 311 | Ga0501074_0115442 | |||
| 312 | Ga0501074_0242170 | |||
| 313 | Ga0501076_0063732 | |||
| 314 | Ga0501076_0261089 | |||
| 315 | Ga0501077_0563474 | |||
| 316 | Ga0501077_0667206 | |||
| 317 | Ga0501079_0037369 | |||
| 318 | Ga0501079_0173905 | |||
| 319 | Ga0501079_0256696 | |||
| 320 | Ga0501080_0097014 | |||
| 321 | Ga0501080_0147984 | |||
| 322 | Ga0501080_0502647 | |||
| 323 | Ga0501083_0014190 | |||
| 324 | Ga0501035_0015793 | |||
| 325 | Ga0501035_0024099 | |||
| 326 | Ga0501035_0281384 | |||
| 327 | Ga0501035_0652241 | |||
| 328 | Ga0501035_0684502 | |||
| 329 | Ga0501044_0016528 | |||
| 330 | Ga0501044_0017323 | |||
| 331 | Ga0501044_0053714 | |||
| 332 | Ga0501044_0486197 | |||
| 333 | Ga0501045_0138453 | |||
| 334 | nmdc:mga03n38_5667_c1 | |||
| 335 | nmdc:mga00v17_12128_c1 | |||
| 336 | nmdc:mga00v17_82871_c1 | |||
| 337 | Ga0501084_0354151 | |||
| 338 | Ga0501082_0016400 | |||
| 339 | Ga0501082_0326082 | |||
| 340 | Ga0501082_0501957 | |||
| 341 | Ga0466962_0031518 | |||
| 342 | Ga0466962_0046574 | |||
| 343 | Ga0530510_0027964 | |||
| 344 | 2861522497 | |||
| 345 | 2868091047 | |||
| 346 | 8056210173 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4lb5-assembly1.cif.gz_B | crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) | 0.9105 | 24 | 83 |
| 6pco-assembly2.cif.gz_C | mechanism for regulation of dna binding of bordetella bronchiseptica bpsr by 6-hydroxynicotinic acid | 0.9071 | 18 | 83 |
| 5j6x-assembly2.cif.gz_B | crystal structure of the apo-zalpha of zebrafish pkz | 0.9059 | 22 | 83 |
| 2g9w-assembly1.cif.gz_B | crystal structure of rv1846c, a putative transcriptional regulatory protein of mycobacterium tuberculosis | 0.8825 | 17 | 86 |
| 4ggg-assembly2.cif.gz_B | crystal structure of v66a/l68v czra in the zn(ii)bound state. | 0.8818 | 19 | 85 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WN87_5_83_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9852 | 5 | 83 | 1.10.10.10 |
| af_P9WN87_5_83_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.973 | 5 | 83 | 1.10.10.10 |
| 4lb5B00 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9105 | 24 | 83 | 1.10.10.10 |
| 5j6xB00 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9059 | 22 | 83 | 1.10.10.10 |
| 1saxB01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.8979 | 19 | 83 | 1.10.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A519GNQ1-F1-model_v4 | Transcriptional repressor | 0.9153 | 3 | 104 |
GO:0000976
GO:0003700 GO:0005737 GO:0008270 GO:0045892 GO:1900376 |
| AF-A0A519GNQ1-F1-model_v4 | Transcriptional repressor | 0.8986 | 3 | 104 |
GO:0000976
GO:0003700 GO:0005737 GO:0008270 GO:0045892 GO:1900376 |
| AF-A0A6M0KVI6-F1-model_v4 | deleted | 0.8775 | 1 | 106 |
|
| AF-A0A6M0KVI6-F1-model_v4 | deleted | 0.8698 | 1 | 106 |
|
| AF-A0A840IV45-F1-model_v4 | Fur family ferric uptake transcriptional regulator | 0.8434 | 2 | 138 |
GO:0000976
GO:0003700 GO:0005737 GO:0008270 GO:0045892 GO:1900376 |