F260618

General Info

Members Datasets Scaffolds Average Seq Length
172 95 344 239

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10101488|Ga0111539_101014882
Length 257
Sequence MGEERSAPAREEIDLGAGEHLPKLRTGGRPPHPDWLPRQRRGTTPQMIGRYPDYDVLEAADTWDDATRKVVFARLEPPGPLRFFTAEEEPTLRAFCDTVMAQDSEPRVPVAEAVDDKLAAGRLDGYQYADMPDDRDTWRLVLRGLDHTAYHGYRCGFAGCSGEQRENIVDEFAKGRLVGGPWDELNVSRAWSVVMRAVLAAFYSRPWAWNEIGFGGPAYPRGFMRLGGLAASTAAVLEPFERPGAYAADPVREDGDA

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
21 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
22 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
23 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
25 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
26 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
28 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
29 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
30 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
31 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
32 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
54 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
55 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
56 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
57 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
58 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
59 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
60 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
61 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
64 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
65 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
66 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
67 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
70 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
71 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
72 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
73 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
74 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
75 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
76 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
77 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
78 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
79 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
87 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
94 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
95 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.19
Metatranscriptomes 5.23
Isolates 0.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.56
Rhizosphere 87.21
Stem 0
Stem Tuber 0
Unclassified 0.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10101488 3300009094 Bacteria 3378
2 Ga0070680_100018562 3300005336 Bacteria 5498
3 Ga0070682_100034400 3300005337 Bacteria 3086
4 Ga0068868_100149848 3300005338 Bacteria 1920
5 Ga0070660_100497544 3300005339 Bacteria 1014
6 Ga0070674_100709349 3300005356 Bacteria 861
7 Ga0070714_100007556 3300005435 Bacteria 8461
8 Ga0070714_100228555 3300005435 Bacteria 1713
9 Ga0070713_100493533 3300005436 Bacteria 1155
10 Ga0070711_100027919 3300005439 Bacteria 3710
11 Ga0070681_10000212 3300005458 Bacteria 45340
12 Ga0070681_10262781 3300005458 Bacteria 1638
13 Ga0070685_10116523 3300005466 Bacteria 1653
14 Ga0070679_100011345 3300005530 Bacteria 8492
15 Ga0068853_100210252 3300005539 Bacteria 1773
16 Ga0070693_100031800 3300005547 Bacteria 2896
17 Ga0070665_100000352 3300005548 Bacteria 69185
18 Ga0070665_100120542 3300005548 Bacteria 2625
19 Ga0068858_100152881 3300005842 Bacteria 2170
20 Ga0070712_100024779 3300006175 Bacteria 3980
21 Ga0105240_10006990 3300009093 Bacteria 16481
22 Ga0105245_10183843 3300009098 Bacteria 1999
23 Ga0105241_10056521 3300009174 Bacteria 3009
24 Ga0105242_11030664 3300009176 Unclassified 833
25 Ga0182008_10168431 3300014497 Bacteria 1105
26 Ga0197907_10551841 3300020069 Bacteria 2416
27 Ga0206356_10196426 3300020070 Bacteria 2914
28 Ga0206349_1271681 3300020075 Bacteria 2162
29 Ga0206351_10697689 3300020077 Bacteria 3052
30 Ga0206350_10174619 3300020080 Bacteria 2221
31 Ga0206353_10237024 3300020082 Bacteria 7357
32 Ga0213873_10000115 3300021358 Bacteria 15453
33 Ga0213873_10062198 3300021358 Bacteria 1013
34 Ga0213876_10033849 3300021384 Bacteria 2694
35 Ga0213876_10056016 3300021384 Bacteria 2081
36 Ga0213876_10071384 3300021384 Bacteria 1834
37 Ga0213875_10000384 3300021388 Bacteria 39895
38 Ga0213875_10011150 3300021388 Bacteria 4481
39 Ga0224712_10001935 3300022467 Bacteria 4994
40 Ga0224712_10008529 3300022467 Bacteria 3044
41 Ga0207688_10163600 3300025901 Bacteria 1320
42 Ga0207680_10031935 3300025903 Bacteria 2987
43 Ga0207705_10000631 3300025909 Bacteria 29436
44 Ga0207654_10031780 3300025911 Bacteria 2911
45 Ga0207707_10000309 3300025912 Bacteria 51263
46 Ga0207707_10269762 3300025912 Bacteria 1475
47 Ga0207671_10117834 3300025914 Bacteria 2027
48 Ga0207693_10006597 3300025915 Bacteria 9595
49 Ga0207660_10000387 3300025917 Bacteria 28945
50 Ga0207662_10044889 3300025918 Bacteria 2611
51 Ga0207652_10000050 3300025921 Bacteria 120417
52 Ga0207700_10767763 3300025928 Bacteria 862
53 Ga0207664_10010149 3300025929 Bacteria 6643
54 Ga0207664_10010710 3300025929 Bacteria 6485
55 Ga0207664_10201432 3300025929 Bacteria 1718
56 Ga0207690_10375142 3300025932 Bacteria 1129
57 Ga0207677_10051014 3300026023 Bacteria 2802
58 Ga0207678_10132038 3300026067 Bacteria 2131
59 Ga0268266_10000168 3300028379 Bacteria 119675
60 Ga0268266_10189303 3300028379 Bacteria 1878
61 Ga0265760_10035687 3300031090 Bacteria 1473
62 Ga0307413_10195463 3300031824 Bacteria 1456
63 Ga0307409_100063861 3300031995 Bacteria 2890
64 Ga0307416_100047043 3300032002 Bacteria 3411
65 Ga0307415_100000605 3300032126 Bacteria 15694
66 Ga0373935_0526601 3300035692 Bacteria 860
67 Ga0395900_0091182 3300037418 Bacteria 3132
68 Ga0436364_1097075 3300037853 Bacteria 32621
69 Ga0436364_1200640 3300037853 Bacteria 136867
70 Ga0436365_1592038 3300039437 Bacteria 1804
71 Ga0436365_1805548 3300039437 Bacteria 23534
72 Ga0436362_0223731 3300039453 Bacteria 2227
73 Ga0436362_1210136 3300039453 Bacteria 10757
74 Ga0466972_0107885 3300044658 Bacteria 1316
75 Ga0466966_0002253 3300044684 Bacteria 12567
76 Ga0466966_0017809 3300044684 Bacteria 4690
77 Ga0466966_0025145 3300044684 Bacteria 3891
78 Ga0466966_0125918 3300044684 Bacteria 1571
79 Ga0466966_0131044 3300044684 Bacteria 1535
80 Ga0466966_0298595 3300044684 Bacteria 968
81 Ga0466961_0004095 3300044693 Bacteria 9105
82 Ga0466961_0011212 3300044693 Bacteria 5731
83 Ga0466961_0035417 3300044693 Bacteria 3206
84 Ga0466961_0042810 3300044693 Bacteria 2902
85 Ga0466961_0104199 3300044693 Bacteria 1786
86 Ga0466963_0002240 3300044694 Bacteria 10726
87 Ga0466963_0013154 3300044694 Bacteria 5077
88 Ga0466963_0018125 3300044694 Bacteria 4396
89 Ga0466963_0047960 3300044694 Bacteria 2820
90 Ga0466963_0066990 3300044694 Bacteria 2409
91 Ga0466963_0118711 3300044694 Bacteria 1819
92 Ga0466963_0226665 3300044694 Bacteria 1309
93 Ga0466963_0388671 3300044694 Bacteria 983
94 Ga0466971_0008647 3300044719 Bacteria 4443
95 Ga0466971_0012629 3300044719 Bacteria 3705
96 Ga0466971_0040868 3300044719 Bacteria 2083
97 Ga0466971_0064002 3300044719 Bacteria 1665
98 Ga0466968_0008689 3300044735 Bacteria 3893
99 Ga0466968_0025327 3300044735 Bacteria 2429
100 Ga0466970_0005119 3300044765 Bacteria 6476
101 Ga0466970_0055644 3300044765 Bacteria 2113
102 Ga0466970_0125079 3300044765 Bacteria 1410
103 Ga0466957_0001211 3300044842 Bacteria 13445
104 Ga0466957_0002995 3300044842 Bacteria 9174
105 Ga0466957_0007411 3300044842 Bacteria 6200
106 Ga0466957_0123968 3300044842 Bacteria 1649
107 Ga0466957_0173295 3300044842 Bacteria 1406
108 Ga0466957_0414548 3300044842 Bacteria 923
109 Ga0466960_0004389 3300044901 Bacteria 5509
110 Ga0466960_0018783 3300044901 Bacteria 3035
111 Ga0466960_0425517 3300044901 Bacteria 768
112 Ga0466959_0002707 3300045049 Bacteria 11386
113 Ga0466959_0012756 3300045049 Bacteria 6080
114 Ga0466959_0135997 3300045049 Bacteria 1739
115 Ga0466959_0188185 3300045049 Bacteria 1441
116 Ga0466959_0347451 3300045049 Bacteria 1012
117 Ga0466958_0000262 3300045836 Bacteria 20325
118 Ga0466958_0000695 3300045836 Bacteria 14648
119 Ga0466958_0061096 3300045836 Bacteria 2294
120 Ga0466958_0350620 3300045836 Bacteria 950
121 Ga0466958_0385031 3300045836 Bacteria 904
122 Ga0466967_0003545 3300045976 Bacteria 10220
123 Ga0466967_0006176 3300045976 Bacteria 8438
124 Ga0466967_0007010 3300045976 Bacteria 8069
125 Ga0466967_0013344 3300045976 Bacteria 6343
126 Ga0466967_0080009 3300045976 Bacteria 2948
127 Ga0466967_0083504 3300045976 Bacteria 2889
128 Ga0466967_0085045 3300045976 Bacteria 2863
129 Ga0466967_0104475 3300045976 Bacteria 2593
130 Ga0466967_0478606 3300045976 Bacteria 1220
131 Ga0466967_0540381 3300045976 Bacteria 1146
132 Ga0466967_0612961 3300045976 Bacteria 1075
133 Ga0496100_0042409 3300048903 Bacteria 2906
134 Ga0496100_0311247 3300048903 Bacteria 1181
135 Ga0496101_0045571 3300048904 Bacteria 3142
136 Ga0496101_0099202 3300048904 Bacteria 2177
137 Ga0496102_0049509 3300048905 Bacteria 3823
138 Ga0496103_0055379 3300048906 Bacteria 2460
139 Ga0496103_0320250 3300048906 Bacteria 997
140 Ga0496104_0434142 3300048907 Bacteria 1225
141 Ga0496109_0548320 3300048912 Bacteria 1091
142 Ga0496111_0696669 3300048914 Bacteria 739
143 Ga0496114_0039287 3300048917 Bacteria 3916
144 Ga0496115_0001871 3300048918 Bacteria 15064
145 Ga0496115_0037611 3300048918 Bacteria 3836
146 Ga0501034_0013563 3300049571 Bacteria 8387
147 Ga0501036_0264604 3300049572 Bacteria 1440
148 Ga0501037_0040795 3300049573 Bacteria 3415
149 Ga0501046_0027633 3300049580 Bacteria 4627
150 Ga0501047_0011743 3300049581 Bacteria 8283
151 Ga0501047_0014513 3300049581 Bacteria 7493
152 Ga0501047_0014867 3300049581 Bacteria 7409
153 Ga0501047_0047319 3300049581 Bacteria 4156
154 Ga0501047_0212403 3300049581 Bacteria 1793
155 Ga0501048_0001136 3300049582 Bacteria 19978
156 Ga0501067_0110896 3300049583 Bacteria 1525
157 Ga0501069_0451724 3300049585 Bacteria 764
158 Ga0501070_0002995 3300049586 Bacteria 14699
159 Ga0501070_0195642 3300049586 Bacteria 1661
160 Ga0501070_0525174 3300049586 Bacteria 949
161 Ga0501072_0107948 3300049588 Bacteria 2214
162 Ga0501080_0474831 3300049742 Bacteria 1119
163 Ga0501035_0005336 3300049822 Bacteria 12158
164 Ga0501044_0152441 3300049823 Bacteria 2293
165 Ga0495619_0165318 3300053085 Bacteria 1529
166 Ga0466962_0010047 3300061719 Bacteria 4541
167 Ga0466962_0046739 3300061719 Bacteria 2068
168 Ga0466962_0080614 3300061719 Bacteria 1556
169 Ga0466962_0093099 3300061719 Bacteria 1445
170 Ga0466962_0116691 3300061719 Bacteria 1286
171 Ga0466962_0155565 3300061719 Bacteria 1110
172 8054477955 8054472261 Bacteria 7464355
173 Ga0111539_10101488
174 Ga0070680_100018562
175 Ga0070682_100034400
176 Ga0068868_100149848
177 Ga0070660_100497544
178 Ga0070674_100709349
179 Ga0070714_100007556
180 Ga0070714_100228555
181 Ga0070713_100493533
182 Ga0070711_100027919
183 Ga0070681_10000212
184 Ga0070681_10262781
185 Ga0070685_10116523
186 Ga0070679_100011345
187 Ga0068853_100210252
188 Ga0070693_100031800
189 Ga0070665_100000352
190 Ga0070665_100120542
191 Ga0068858_100152881
192 Ga0070712_100024779
193 Ga0105240_10006990
194 Ga0105245_10183843
195 Ga0105241_10056521
196 Ga0105242_11030664
197 Ga0182008_10168431
198 Ga0197907_10551841
199 Ga0206356_10196426
200 Ga0206349_1271681
201 Ga0206351_10697689
202 Ga0206350_10174619
203 Ga0206353_10237024
204 Ga0213873_10000115
205 Ga0213873_10062198
206 Ga0213876_10033849
207 Ga0213876_10056016
208 Ga0213876_10071384
209 Ga0213875_10000384
210 Ga0213875_10011150
211 Ga0224712_10001935
212 Ga0224712_10008529
213 Ga0207688_10163600
214 Ga0207680_10031935
215 Ga0207705_10000631
216 Ga0207654_10031780
217 Ga0207707_10000309
218 Ga0207707_10269762
219 Ga0207671_10117834
220 Ga0207693_10006597
221 Ga0207660_10000387
222 Ga0207662_10044889
223 Ga0207652_10000050
224 Ga0207700_10767763
225 Ga0207664_10010149
226 Ga0207664_10010710
227 Ga0207664_10201432
228 Ga0207690_10375142
229 Ga0207677_10051014
230 Ga0207678_10132038
231 Ga0268266_10000168
232 Ga0268266_10189303
233 Ga0265760_10035687
234 Ga0307413_10195463
235 Ga0307409_100063861
236 Ga0307416_100047043
237 Ga0307415_100000605
238 Ga0373935_0526601
239 Ga0395900_0091182
240 Ga0436364_1097075
241 Ga0436364_1200640
242 Ga0436365_1592038
243 Ga0436365_1805548
244 Ga0436362_0223731
245 Ga0436362_1210136
246 Ga0466972_0107885
247 Ga0466966_0002253
248 Ga0466966_0017809
249 Ga0466966_0025145
250 Ga0466966_0125918
251 Ga0466966_0131044
252 Ga0466966_0298595
253 Ga0466961_0004095
254 Ga0466961_0011212
255 Ga0466961_0035417
256 Ga0466961_0042810
257 Ga0466961_0104199
258 Ga0466963_0002240
259 Ga0466963_0013154
260 Ga0466963_0018125
261 Ga0466963_0047960
262 Ga0466963_0066990
263 Ga0466963_0118711
264 Ga0466963_0226665
265 Ga0466963_0388671
266 Ga0466971_0008647
267 Ga0466971_0012629
268 Ga0466971_0040868
269 Ga0466971_0064002
270 Ga0466968_0008689
271 Ga0466968_0025327
272 Ga0466970_0005119
273 Ga0466970_0055644
274 Ga0466970_0125079
275 Ga0466957_0001211
276 Ga0466957_0002995
277 Ga0466957_0007411
278 Ga0466957_0123968
279 Ga0466957_0173295
280 Ga0466957_0414548
281 Ga0466960_0004389
282 Ga0466960_0018783
283 Ga0466960_0425517
284 Ga0466959_0002707
285 Ga0466959_0012756
286 Ga0466959_0135997
287 Ga0466959_0188185
288 Ga0466959_0347451
289 Ga0466958_0000262
290 Ga0466958_0000695
291 Ga0466958_0061096
292 Ga0466958_0350620
293 Ga0466958_0385031
294 Ga0466967_0003545
295 Ga0466967_0006176
296 Ga0466967_0007010
297 Ga0466967_0013344
298 Ga0466967_0080009
299 Ga0466967_0083504
300 Ga0466967_0085045
301 Ga0466967_0104475
302 Ga0466967_0478606
303 Ga0466967_0540381
304 Ga0466967_0612961
305 Ga0496100_0042409
306 Ga0496100_0311247
307 Ga0496101_0045571
308 Ga0496101_0099202
309 Ga0496102_0049509
310 Ga0496103_0055379
311 Ga0496103_0320250
312 Ga0496104_0434142
313 Ga0496109_0548320
314 Ga0496111_0696669
315 Ga0496114_0039287
316 Ga0496115_0001871
317 Ga0496115_0037611
318 Ga0501034_0013563
319 Ga0501036_0264604
320 Ga0501037_0040795
321 Ga0501046_0027633
322 Ga0501047_0011743
323 Ga0501047_0014513
324 Ga0501047_0014867
325 Ga0501047_0047319
326 Ga0501047_0212403
327 Ga0501048_0001136
328 Ga0501067_0110896
329 Ga0501069_0451724
330 Ga0501070_0002995
331 Ga0501070_0195642
332 Ga0501070_0525174
333 Ga0501072_0107948
334 Ga0501080_0474831
335 Ga0501035_0005336
336 Ga0501044_0152441
337 Ga0495619_0165318
338 Ga0466962_0010047
339 Ga0466962_0046739
340 Ga0466962_0080614
341 Ga0466962_0093099
342 Ga0466962_0116691
343 Ga0466962_0155565
344 8054477955

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13618

Gluconate_2-dh3

Gluconate 2-dehydrogenase subunit 3

86

216

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3w6f-assembly2.cif.gz_B crystal structure of catalytic domain of chitinase from ralstonia sp. a-471 (e162q) in complex with disaccharide 0.3043 56 181
3nke-assembly1.cif.gz_B high resolution structure of the c-terminal domain crisp-associated protein cas1 from escherichia coli str. k-12 0.291 68 181
3w6f-assembly2.cif.gz_B crystal structure of catalytic domain of chitinase from ralstonia sp. a-471 (e162q) in complex with disaccharide 0.2682 56 181
8b4l-assembly1.cif.gz_E crystal structure of a selenomethionine-labeled hydropyrene synthase (m75l variant) in its closed conformation 0.2608 56 176
7uj6-assembly1.cif.gz_B outer surface protein c type k 0.2607 36 182
ID Description Score Start End Superfamily
af_Q6ZPR4_214_337_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.306 45 205 1.10.287.70
af_Q6ZPR4_214_337_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.304 45 205 1.10.287.70
af_B8JLG8_255_428_1.10.1410.40 Mainly Alpha;Orthogonal Bundle;Poly(a)-polymerase, middle domain; 0.2944 64 165 1.10.1410.40
af_A0A1D6MXM2_328_528_1.10.8.430 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Helical domain of apoptotic protease-activating factors 0.2878 61 182 1.10.8.430
af_F1LPQ2_980_1122_1.10.3380.10 Mainly Alpha;Orthogonal Bundle;Sec63 N-terminal domain-like fold;Sec63 N-terminal domain-like domain 0.2731 35 206 1.10.3380.10
ID Description Score Start End GO Terms
AF-A0A498PYY2-F1-model_v4 Uncharacterized protein 0.947 16 181
AF-A0A7L5DXK3-F1-model_v4 Gluconate 2-dehydrogenase subunit 3 family protein 0.9398 56 186
AF-A0A6I1W2T7-F1-model_v4 Gluconate 2-dehydrogenase subunit 3 family protein 0.9363 114 183
AF-A0A2M7T9S6-F1-model_v4 Gluconate 2-dehydrogenase 0.9323 32 200
AF-A0A7J5TXK3-F1-model_v4 Gluconate 2-dehydrogenase subunit 3 family protein 0.9319 34 196

Map