F259604

General Info

Members Datasets Scaffolds Average Seq Length
171 117 342 293

Family's Representative Sequence

Representative Sequence 3300050492|nmdc:mga0yw44_138526_c1|nmdc:mga0yw44_138526_c1_413_1462
Length 349
Sequence MRVALDAEPREQPDLGHLLLAEPVPGVAVHGDDGLLRGHERNVPSTFVETLDRPTWQARAAAHAARVDAWVQPHLARRRTGEKHPVHDFLFDYYSQRPAALRRWHPGFGVVLEDAPEYDGVKGYGRIVRHEKHLDCTESGAKRDGLSVTVDHLASQVALVESIRRLLAATAARPATLGCFGLHEWAMVHRTDATRHDWPLRLGTTGTDTVVETHRITCSHFDAFRFFTDSARPLNTLNPGRDDRPEFEQPGCLHAGMDLYKHAFRLTPLLPSELVADCFALAWDIRVLDMRASPYDFADLGLDPVRIETPVGKQEYVAAQRGFAERGAPLRARLVDECDRLLAVTPPEG

Samples

Sample ID Description Type Environment
1 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
26 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
30 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
31 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
43 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
44 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
45 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
46 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
47 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
48 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
49 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
50 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
51 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
52 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
53 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
54 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
55 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
56 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
57 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
58 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
59 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
60 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
61 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
66 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
67 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
70 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
71 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
72 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
73 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
74 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
75 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
76 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
77 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
84 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
85 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
86 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
87 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
88 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
89 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
90 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
91 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
92 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
93 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
94 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
95 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
96 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
97 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
98 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
99 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
100 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
101 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
102 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
103 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
104 2643221561 Nocardioides sp. Root151 Isolate Unclassified
105 2643221576 Nocardioides sp. Root614 Isolate Unclassified
106 2643221590 Nocardioides sp. Root682 Isolate Unclassified
107 2643221604 Nocardioides sp. Root190 Isolate Unclassified
108 2643221615 Nocardioides sp. Root224 Isolate Unclassified
109 2643221641 Nocardioides sp. Root122 Isolate Unclassified
110 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
111 2643221696 Nocardioides sp. Root140 Isolate Unclassified
112 2738541305 Nocardioides sp. CF167 Isolate Unclassified
113 2739367898 Nocardioides sp. CF479 Isolate Unclassified
114 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
115 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
116 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
117 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.23
Metatranscriptomes 0.58
Isolates 8.19

Biome Distribution

Category Percentage (%)
Aerial Root 0.58
Bulb 0
Endosphere 19.3
Nodule 0.58
Rhizoplane 5.85
Rhizosphere 64.33
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0yw44_138526_c1 3300050492 Bacteria 1580
2 JGI24740J21852_10018652 3300001979 Bacteria 2454
3 JGI24737J22298_10015624 3300001990 Bacteria 2456
4 Ga0006562J51391_1107667 3300003578 Bacteria 1350
5 Ga0070683_100126851 3300005329 Bacteria 2412
6 Ga0070660_100072395 3300005339 Bacteria 2693
7 Ga0070660_100173595 3300005339 Bacteria 1742
8 Ga0070692_10002316 3300005345 Bacteria 7341
9 Ga0070688_100335268 3300005365 Bacteria 1103
10 Ga0070659_100013271 3300005366 Bacteria 6127
11 Ga0070659_100039300 3300005366 Bacteria 3693
12 Ga0070700_100072372 3300005441 Bacteria 2203
13 Ga0070672_100003863 3300005543 Bacteria 9752
14 Ga0070664_100011923 3300005564 Bacteria 7057
15 Ga0068854_100032957 3300005578 Bacteria 3609
16 Ga0068861_100016626 3300005719 Bacteria 5209
17 Ga0068870_10004065 3300005840 Bacteria 6256
18 Ga0068860_100000520 3300005843 Bacteria 47181
19 Ga0075365_10024194 3300006038 Bacteria 3827
20 Ga0075365_10041617 3300006038 Bacteria 3002
21 Ga0075365_10092783 3300006038 Bacteria 2059
22 Ga0075365_10170789 3300006038 Bacteria 1517
23 Ga0075365_10173515 3300006038 Bacteria 1505
24 Ga0075365_10174277 3300006038 Bacteria 1502
25 Ga0075368_10003406 3300006042 Bacteria 5306
26 Ga0075363_100023612 3300006048 Bacteria 3119
27 Ga0075363_100029128 3300006048 Bacteria 2847
28 Ga0075363_100097159 3300006048 Bacteria 1627
29 Ga0075363_100217940 3300006048 Bacteria 1093
30 Ga0075364_10043464 3300006051 Bacteria 2922
31 Ga0075364_10094485 3300006051 Bacteria 1987
32 Ga0075364_10128836 3300006051 Bacteria 1698
33 Ga0075362_10028263 3300006177 Bacteria 2407
34 Ga0075370_10053690 3300006353 Bacteria 2287
35 Ga0068865_100083410 3300006881 Bacteria 2300
36 Ga0111539_10749110 3300009094 Bacteria 1137
37 Ga0111539_10763733 3300009094 Bacteria 1125
38 Ga0105238_10071618 3300009551 Bacteria 3464
39 Ga0105249_10004469 3300009553 Bacteria 12090
40 Ga0105239_10026430 3300010375 Bacteria 6388
41 Ga0105246_10251533 3300011119 Bacteria 1403
42 Ga0157377_10009993 3300014745 Bacteria 4681
43 Ga0163161_10187351 3300017792 Bacteria 1589
44 Ga0207688_10006447 3300025901 Bacteria 6391
45 Ga0207647_10007381 3300025904 Bacteria 7948
46 Ga0207647_10053345 3300025904 Bacteria 2492
47 Ga0207643_10008838 3300025908 Bacteria 5406
48 Ga0207657_10015235 3300025919 Bacteria 7458
49 Ga0207690_10033114 3300025932 Bacteria 3321
50 Ga0207690_10039070 3300025932 Bacteria 3094
51 Ga0207690_10230198 3300025932 Bacteria 1422
52 Ga0207691_10020337 3300025940 Bacteria 6275
53 Ga0207679_10129641 3300025945 Bacteria 2021
54 Ga0207678_10010712 3300026067 Bacteria 8054
55 Ga0207708_10000645 3300026075 Bacteria 26768
56 Ga0207648_10010652 3300026089 Bacteria 8691
57 Ga0268264_10000242 3300028381 Bacteria 103492
58 Ga0316575_10012143 3300031665 Bacteria 3198
59 Ga0316579_10067382 3300031691 Bacteria 1691
60 Ga0316576_10071389 3300031727 Bacteria 2561
61 Ga0307411_10045266 3300032005 Bacteria 2830
62 Ga0307415_100089880 3300032126 Bacteria 2220
63 Ga0316574_0025840 3300035398 Bacteria 3527
64 Ga0316584_0025564 3300036712 Bacteria 4332
65 Ga0395899_0144699 3300037312 Bacteria 1689
66 Ga0395900_0072412 3300037418 Bacteria 3543
67 Ga0395900_0177486 3300037418 Bacteria 2166
68 Ga0395900_0440254 3300037418 Bacteria 1261
69 Ga0395898_0064990 3300037466 Bacteria 3538
70 Ga0395898_0271950 3300037466 Bacteria 1616
71 Ga0395905_0055937 3300037471 Bacteria 3693
72 Ga0316581_0078986 3300037588 Bacteria 1012
73 Ga0395901_0028796 3300038443 Bacteria 5714
74 Ga0395901_0052616 3300038443 Bacteria 4232
75 Ga0451837_0500473 3300041494 Bacteria 1327
76 Ga0451853_1635518 3300041512 Bacteria 1017
77 Ga0439434_0020974 3300042435 Bacteria 1962
78 Ga0466972_0027194 3300044658 Bacteria 2831
79 Ga0466965_0087658 3300044683 Bacteria 1580
80 Ga0466966_0032285 3300044684 Bacteria 3394
81 Ga0466961_0027546 3300044693 Bacteria 3655
82 Ga0466961_0029267 3300044693 Bacteria 3542
83 Ga0466961_0033388 3300044693 Bacteria 3306
84 Ga0466963_0004722 3300044694 Bacteria 7955
85 Ga0466963_0134303 3300044694 Bacteria 1711
86 Ga0466971_0005413 3300044719 Bacteria 5536
87 Ga0466971_0091801 3300044719 Bacteria 1391
88 Ga0466970_0005621 3300044765 Bacteria 6227
89 Ga0466970_0072821 3300044765 Bacteria 1849
90 Ga0466970_0074127 3300044765 Bacteria 1832
91 Ga0466957_0078604 3300044842 Bacteria 2051
92 Ga0466960_0017528 3300044901 Bacteria 3124
93 Ga0466960_0019937 3300044901 Bacteria 2962
94 Ga0466960_0042106 3300044901 Bacteria 2167
95 Ga0466958_0010864 3300045836 Bacteria 5113
96 Ga0466967_0024637 3300045976 Bacteria 4951
97 Ga0466967_0042183 3300045976 Bacteria 3941
98 Ga0466967_0137170 3300045976 Bacteria 2275
99 Ga0466967_0243905 3300045976 Bacteria 1714
100 Ga0496100_0048607 3300048903 Bacteria 2739
101 Ga0496102_0038188 3300048905 Bacteria 4333
102 Ga0496106_0035347 3300048909 Bacteria 3736
103 Ga0496110_0062348 3300048913 Bacteria 3293
104 Ga0496111_0060250 3300048914 Bacteria 2751
105 Ga0496112_0083833 3300048915 Bacteria 3153
106 Ga0496114_0005753 3300048917 Bacteria 9733
107 Ga0496114_0012051 3300048917 Bacteria 6917
108 Ga0496114_0091622 3300048917 Bacteria 2582
109 Ga0496114_0146501 3300048917 Bacteria 2047
110 Ga0496125_0000148 3300048928 Bacteria 154612
111 Ga0501031_0017540 3300049568 Bacteria 4654
112 Ga0501036_0055608 3300049572 Bacteria 3353
113 Ga0501036_0095287 3300049572 Bacteria 2516
114 Ga0501036_0193068 3300049572 Bacteria 1713
115 Ga0501039_0414343 3300049575 Bacteria 1058
116 Ga0501040_0328073 3300049576 Bacteria 1095
117 Ga0501042_0101698 3300049578 Bacteria 2067
118 Ga0501048_0225181 3300049582 Bacteria 1331
119 Ga0501067_0004218 3300049583 Bacteria 7930
120 Ga0501067_0013753 3300049583 Bacteria 4481
121 Ga0501067_0035126 3300049583 Bacteria 2783
122 Ga0501068_0238917 3300049584 Bacteria 1156
123 Ga0501069_0070620 3300049585 Bacteria 1957
124 Ga0501069_0218135 3300049585 Bacteria 1108
125 Ga0501070_0069759 3300049586 Bacteria 2910
126 Ga0501070_0090977 3300049586 Bacteria 2525
127 Ga0501071_0052107 3300049587 Bacteria 2951
128 Ga0501071_0118425 3300049587 Bacteria 1962
129 Ga0501074_0125286 3300049590 Bacteria 1838
130 Ga0501074_0359847 3300049590 Bacteria 1033
131 Ga0501076_0099242 3300049592 Bacteria 2346
132 Ga0501079_0280542 3300049741 Bacteria 1303
133 Ga0501080_0572468 3300049742 Bacteria 1005
134 Ga0501081_0334361 3300049743 Bacteria 1115
135 Ga0501045_0017641 3300049824 Bacteria 5068
136 Ga0501045_0165263 3300049824 Bacteria 1648
137 Ga0501045_0335888 3300049824 Bacteria 1124
138 nmdc:mga03n38_32590_c1 3300050490 Bacteria 2209
139 nmdc:mga03n38_52568_c1 3300050490 Bacteria 1824
140 nmdc:mga03n38_69871_c1 3300050490 Bacteria 1623
141 nmdc:mga00v17_110792_c1 3300050491 Bacteria 1741
142 nmdc:mga00v17_116298_c1 3300050491 Bacteria 1700
143 nmdc:mga00v17_45709_c1 3300050491 Bacteria 2646
144 nmdc:mga0yw44_19725_c1 3300050492 Bacteria 3725
145 nmdc:mga0yw44_290709_c1 3300050492 Bacteria 1094
146 nmdc:mga06z11_21522_c1 3300050494 Bacteria 2997
147 nmdc:mga04h51_11935_c1 3300050495 Bacteria 2425
148 nmdc:mga04h51_86165_c1 3300050495 Bacteria 1123
149 nmdc:mga04h51_94558_c1 3300050495 Bacteria 1081
150 nmdc:mga07m45_31933_c1 3300050496 Bacteria 2919
151 nmdc:mga07m45_48949_c1 3300050496 Bacteria 1182
152 Ga0500644_0000106 3300053088 Bacteria 52751
153 Ga0500593_088026 3300053117 Bacteria 1318
154 Ga0501082_0493158 3300060353 Bacteria 1071
155 Ga0466962_0075027 3300061719 Bacteria 1616
156 Ga0466962_0087453 3300061719 Bacteria 1492
157 Ga0530510_0064190 3300061734 Bacteria 2660
158 2643825317 2643221561 Bacteria 4984412
159 2643893192 2643221576 Bacteria 5214352
160 2643961749 2643221590 Bacteria 5214697
161 2644034079 2643221604 Bacteria 5014917
162 2644089894 2643221615 Bacteria 5487866
163 2644231413 2643221641 Bacteria 4490190
164 2644319739 2643221657 Bacteria 5490246
165 2644531310 2643221696 Bacteria 5431823
166 2738871284 2738541305 Bacteria 4910150
167 2740166732 2739367898 Bacteria 4367674
168 2812333853 2811994874 Bacteria 5367947
169 2857484093 2857481737 Bacteria 4761446
170 2990258859 2990256926 Bacteria 4252839
171 8054612457 8054609563 Bacteria 5170090
172 nmdc:mga0yw44_138526_c1
173 JGI24740J21852_10018652
174 JGI24737J22298_10015624
175 Ga0006562J51391_1107667
176 Ga0070683_100126851
177 Ga0070660_100072395
178 Ga0070660_100173595
179 Ga0070692_10002316
180 Ga0070688_100335268
181 Ga0070659_100013271
182 Ga0070659_100039300
183 Ga0070700_100072372
184 Ga0070672_100003863
185 Ga0070664_100011923
186 Ga0068854_100032957
187 Ga0068861_100016626
188 Ga0068870_10004065
189 Ga0068860_100000520
190 Ga0075365_10024194
191 Ga0075365_10041617
192 Ga0075365_10092783
193 Ga0075365_10170789
194 Ga0075365_10173515
195 Ga0075365_10174277
196 Ga0075368_10003406
197 Ga0075363_100023612
198 Ga0075363_100029128
199 Ga0075363_100097159
200 Ga0075363_100217940
201 Ga0075364_10043464
202 Ga0075364_10094485
203 Ga0075364_10128836
204 Ga0075362_10028263
205 Ga0075370_10053690
206 Ga0068865_100083410
207 Ga0111539_10749110
208 Ga0111539_10763733
209 Ga0105238_10071618
210 Ga0105249_10004469
211 Ga0105239_10026430
212 Ga0105246_10251533
213 Ga0157377_10009993
214 Ga0163161_10187351
215 Ga0207688_10006447
216 Ga0207647_10007381
217 Ga0207647_10053345
218 Ga0207643_10008838
219 Ga0207657_10015235
220 Ga0207690_10033114
221 Ga0207690_10039070
222 Ga0207690_10230198
223 Ga0207691_10020337
224 Ga0207679_10129641
225 Ga0207678_10010712
226 Ga0207708_10000645
227 Ga0207648_10010652
228 Ga0268264_10000242
229 Ga0316575_10012143
230 Ga0316579_10067382
231 Ga0316576_10071389
232 Ga0307411_10045266
233 Ga0307415_100089880
234 Ga0316574_0025840
235 Ga0316584_0025564
236 Ga0395899_0144699
237 Ga0395900_0072412
238 Ga0395900_0177486
239 Ga0395900_0440254
240 Ga0395898_0064990
241 Ga0395898_0271950
242 Ga0395905_0055937
243 Ga0316581_0078986
244 Ga0395901_0028796
245 Ga0395901_0052616
246 Ga0451837_0500473
247 Ga0451853_1635518
248 Ga0439434_0020974
249 Ga0466972_0027194
250 Ga0466965_0087658
251 Ga0466966_0032285
252 Ga0466961_0027546
253 Ga0466961_0029267
254 Ga0466961_0033388
255 Ga0466963_0004722
256 Ga0466963_0134303
257 Ga0466971_0005413
258 Ga0466971_0091801
259 Ga0466970_0005621
260 Ga0466970_0072821
261 Ga0466970_0074127
262 Ga0466957_0078604
263 Ga0466960_0017528
264 Ga0466960_0019937
265 Ga0466960_0042106
266 Ga0466958_0010864
267 Ga0466967_0024637
268 Ga0466967_0042183
269 Ga0466967_0137170
270 Ga0466967_0243905
271 Ga0496100_0048607
272 Ga0496102_0038188
273 Ga0496106_0035347
274 Ga0496110_0062348
275 Ga0496111_0060250
276 Ga0496112_0083833
277 Ga0496114_0005753
278 Ga0496114_0012051
279 Ga0496114_0091622
280 Ga0496114_0146501
281 Ga0496125_0000148
282 Ga0501031_0017540
283 Ga0501036_0055608
284 Ga0501036_0095287
285 Ga0501036_0193068
286 Ga0501039_0414343
287 Ga0501040_0328073
288 Ga0501042_0101698
289 Ga0501048_0225181
290 Ga0501067_0004218
291 Ga0501067_0013753
292 Ga0501067_0035126
293 Ga0501068_0238917
294 Ga0501069_0070620
295 Ga0501069_0218135
296 Ga0501070_0069759
297 Ga0501070_0090977
298 Ga0501071_0052107
299 Ga0501071_0118425
300 Ga0501074_0125286
301 Ga0501074_0359847
302 Ga0501076_0099242
303 Ga0501079_0280542
304 Ga0501080_0572468
305 Ga0501081_0334361
306 Ga0501045_0017641
307 Ga0501045_0165263
308 Ga0501045_0335888
309 nmdc:mga03n38_32590_c1
310 nmdc:mga03n38_52568_c1
311 nmdc:mga03n38_69871_c1
312 nmdc:mga00v17_110792_c1
313 nmdc:mga00v17_116298_c1
314 nmdc:mga00v17_45709_c1
315 nmdc:mga0yw44_19725_c1
316 nmdc:mga0yw44_290709_c1
317 nmdc:mga06z11_21522_c1
318 nmdc:mga04h51_11935_c1
319 nmdc:mga04h51_86165_c1
320 nmdc:mga04h51_94558_c1
321 nmdc:mga07m45_31933_c1
322 nmdc:mga07m45_48949_c1
323 Ga0500644_0000106
324 Ga0500593_088026
325 Ga0501082_0493158
326 Ga0466962_0075027
327 Ga0466962_0087453
328 Ga0530510_0064190
329 2643825317
330 2643893192
331 2643961749
332 2644034079
333 2644089894
334 2644231413
335 2644319739
336 2644531310
337 2738871284
338 2740166732
339 2812333853
340 2857484093
341 2990258859
342 8054612457

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
7sqc-assembly1.cif.gz_C1 ciliary c1 central pair apparatus isolated from chlamydomonas reinhardtii 0.5945 192 281
3t6g-assembly2.cif.gz_D structure of the complex between nsp3 (shep1) and p130cas 0.5788 192 280
1oah-assembly1.cif.gz_A cytochrome c nitrite reductase from desulfovibrio desulfuricans atcc 27774: the relevance of the two calcium sites in the structure of the catalytic subunit (nrfa). 0.5246 192 282
2j7a-assembly3.cif.gz_N crystal structure of cytochrome c nitrite reductase nrfha complex from desulfovibrio vulgaris 0.5208 192 282
8bcx-assembly3.cif.gz_C crystal structure of nrfa-1 from geobacter metallireducens 0.4995 189 275
ID Description Score Start End Superfamily
af_Q61140_738_874_1.20.120.230 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.6428 192 278 1.20.120.230
af_Q54LG9_4_159_1.20.120.1190 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.6235 192 281 1.20.120.1190
af_P56945_734_870_1.20.120.230 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.5666 192 278 1.20.120.230
af_Q63767_832_968_1.20.120.230 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.5585 192 278 1.20.120.230
af_I1MY53_50_374_1.20.1170.10 Mainly Alpha;Up-down Bundle;Hemolysin E; Chain: A;; 0.5584 192 281 1.20.1170.10
ID Description Score Start End GO Terms
AF-A0A7W9HLV8-F1-model_v4 Uncharacterized protein 0.9996 197 280
AF-A0A5N5EAZ7-F1-model_v4 3-methyladenine DNA glycosylase 0.9948 187 281
AF-A0A7Y9RU97-F1-model_v4 Uncharacterized protein 0.991 197 281
AF-A0A7V9UI59-F1-model_v4 3-methyladenine DNA glycosylase 0.9887 111 280
AF-A0A449GCB3-F1-model_v4 3-methyladenine DNA glycosylase 0.9884 2 282

Map