F258811

General Info

Members Datasets Scaffolds Average Seq Length
171 101 171 364

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10020170|Ga0157380_100201703
Length 414
Sequence MASGSCQNHLRKRVAVVPKPDQPILNSLREILESSPQLRDLGMHTLRDDEAPQPLAPARWDWQTVERVLVVRLRSIGDTVLCTPSLFALKRFLPHASVDILLEDWVAPVLDGFPHVDKIIGLERKSNSSRAWVAHQLRANRYDVVYNLHGGTTATLIARATGAKHRVGYETYQYARLHNHLAPSSASLWGREKTHSVEQQLALLGWTGVPVSDRPATQLAVTKTASLNIAARLKAVGLEDARRAQLAVIHPAAAFATKQWATENFARVAEQLAAQNLKVVVITAANQVQIADELKRKTAAPVVAFTDLYLPEITALLARARLFLGNDSGIAHMAAAVQTPSVVIFGSSNTAHWRPWVSQTAVAEVVLEEMECQPCHGYFCEKFAEPECIKRVPIERVIAATDRVLRESSPRSGR

Samples

Sample ID Description Type Environment
1 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
88 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
89 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
90 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
91 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
92 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
93 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
96 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
97 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
98 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
99 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
100 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
101 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.34
Rhizosphere 96.49
Stem 0
Stem Tuber 0
Unclassified 1.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNAas_1000033 3300000532 Bacteria 9050
2 JGI24751J29686_10000009 3300002459 Bacteria 125815
3 Ga0065712_10014090 3300005290 Bacteria 2246
4 Ga0065715_10107938 3300005293 Bacteria 2744
5 Ga0065707_10125579 3300005295 Bacteria 2011
6 Ga0070690_100018006 3300005330 Bacteria 4259
7 Ga0070690_100045400 3300005330 Bacteria 2791
8 Ga0070670_100000211 3300005331 Bacteria 53760
9 Ga0070670_100002378 3300005331 Bacteria 15493
10 Ga0070670_100071596 3300005331 Bacteria 2977
11 Ga0070670_100079768 3300005331 Bacteria 2813
12 Ga0070670_100088883 3300005331 Bacteria 2656
13 Ga0068869_100007774 3300005334 Bacteria 6877
14 Ga0070680_100009903 3300005336 Bacteria 7338
15 Ga0070680_100026613 3300005336 Bacteria 4626
16 Ga0070680_100246681 3300005336 Bacteria 1510
17 Ga0070682_100008972 3300005337 Bacteria 5650
18 Ga0070687_100127276 3300005343 Unclassified 1466
19 Ga0070692_10043813 3300005345 Bacteria 2303
20 Ga0070669_100004691 3300005353 Bacteria 9861
21 Ga0070669_100007425 3300005353 Bacteria 7853
22 Ga0070669_100034811 3300005353 Bacteria 3646
23 Ga0070673_100258584 3300005364 Unclassified 1520
24 Ga0070659_100014643 3300005366 Bacteria 5864
25 Ga0070701_10157903 3300005438 Bacteria 1311
26 Ga0070700_100000120 3300005441 Bacteria 48358
27 Ga0070700_100005014 3300005441 Bacteria 6980
28 Ga0070694_100052435 3300005444 Unclassified 2757
29 Ga0070694_100059236 3300005444 Unclassified 2608
30 Ga0070694_100194239 3300005444 Bacteria 1509
31 Ga0070708_100002930 3300005445 Bacteria 13276
32 Ga0070708_100162410 3300005445 Bacteria 2082
33 Ga0070681_10000418 3300005458 Bacteria 34447
34 Ga0070681_10006077 3300005458 Bacteria 11710
35 Ga0068867_100084559 3300005459 Bacteria 2397
36 Ga0068867_100262796 3300005459 Bacteria 1408
37 Ga0070706_100002918 3300005467 Bacteria 17022
38 Ga0070706_100012434 3300005467 Bacteria 7887
39 Ga0070706_100026119 3300005467 Bacteria 5373
40 Ga0070706_100118876 3300005467 Bacteria 2462
41 Ga0070707_100018365 3300005468 Bacteria 6580
42 Ga0070707_100220940 3300005468 Bacteria 1845
43 Ga0070698_100006225 3300005471 Bacteria 12988
44 Ga0070698_100008120 3300005471 Bacteria 11346
45 Ga0070698_100008736 3300005471 Bacteria 10909
46 Ga0070698_100020096 3300005471 Bacteria 7000
47 Ga0070698_100020954 3300005471 Bacteria 6851
48 Ga0070698_100200106 3300005471 Unclassified 1933
49 Ga0070699_100002146 3300005518 Bacteria 17859
50 Ga0070699_100049751 3300005518 Bacteria 3627
51 Ga0070699_100253930 3300005518 Bacteria 1571
52 Ga0070679_100001676 3300005530 Bacteria 19979
53 Ga0070679_100012461 3300005530 Bacteria 8126
54 Ga0070684_100032365 3300005535 Bacteria 4456
55 Ga0070697_100000150 3300005536 Bacteria 56876
56 Ga0070697_100001422 3300005536 Bacteria 18187
57 Ga0070697_100046726 3300005536 Bacteria 3509
58 Ga0070697_100089436 3300005536 Unclassified 2544
59 Ga0068853_100002055 3300005539 Bacteria 14911
60 Ga0070686_100007693 3300005544 Bacteria 6023
61 Ga0070686_100023345 3300005544 Unclassified 3696
62 Ga0070695_100157444 3300005545 Bacteria 1591
63 Ga0070696_100078003 3300005546 Bacteria 2341
64 Ga0070696_100105280 3300005546 Bacteria 2026
65 Ga0070696_100127004 3300005546 Unclassified 1851
66 Ga0070704_100059037 3300005549 Bacteria 2735
67 Ga0070704_100311185 3300005549 Unclassified 1316
68 Ga0070664_100036171 3300005564 Unclassified 4148
69 Ga0068857_100001329 3300005577 Bacteria 19440
70 Ga0068854_100151515 3300005578 Bacteria 1789
71 Ga0068856_100004074 3300005614 Bacteria 14619
72 Ga0070702_100068179 3300005615 Bacteria 2093
73 Ga0068859_100048107 3300005617 Bacteria 4284
74 Ga0068859_100208350 3300005617 Bacteria 2041
75 Ga0068859_100297303 3300005617 Bacteria 1708
76 Ga0068863_100035564 3300005841 Bacteria 4744
77 Ga0068858_100432567 3300005842 Unclassified 1266
78 Ga0068860_100127325 3300005843 Bacteria 2441
79 Ga0068862_100024356 3300005844 Bacteria 5078
80 Ga0081539_10000408 3300005985 Bacteria 91634
81 Ga0075433_10022300 3300006852 Bacteria 5315
82 Ga0075433_10024828 3300006852 Bacteria 5063
83 Ga0075433_10051975 3300006852 Unclassified 3570
84 Ga0097620_100048104 3300006931 Bacteria 4284
85 Ga0097620_100208361 3300006931 Bacteria 2041
86 Ga0097620_100297286 3300006931 Bacteria 1708
87 Ga0105240_10528431 3300009093 Bacteria 1308
88 Ga0114129_10010529 3300009147 Bacteria 13187
89 Ga0114129_10022997 3300009147 Bacteria 8843
90 Ga0114129_10059122 3300009147 Bacteria 5359
91 Ga0114129_10064531 3300009147 Bacteria 5111
92 Ga0114129_10088982 3300009147 Bacteria 4280
93 Ga0114129_10712862 3300009147 Bacteria 1288
94 Ga0105243_10027085 3300009148 Bacteria 4390
95 Ga0105243_10052085 3300009148 Unclassified 3241
96 Ga0105248_10041527 3300009177 Bacteria 5157
97 Ga0105249_10023019 3300009553 Bacteria 5586
98 Ga0105249_10081610 3300009553 Unclassified 3006
99 Ga0105239_10141971 3300010375 Bacteria 2677
100 Ga0105239_10406399 3300010375 Unclassified 1541
101 Ga0157373_10033377 3300013100 Bacteria 3703
102 Ga0157378_10027351 3300013297 Bacteria 5033
103 Ga0157378_10148882 3300013297 Unclassified 2180
104 Ga0157378_10266330 3300013297 Bacteria 1646
105 Ga0163162_10006495 3300013306 Bacteria 11322
106 Ga0163162_10046978 3300013306 Unclassified 4327
107 Ga0163162_10506649 3300013306 Bacteria 1337
108 Ga0157375_10081475 3300013308 Bacteria 3276
109 Ga0163163_10002287 3300014325 Bacteria 16162
110 Ga0163163_10005417 3300014325 Bacteria 11033
111 Ga0163163_10005449 3300014325 Bacteria 11001
112 Ga0163163_10087524 3300014325 Bacteria 3125
113 Ga0163163_10285921 3300014325 Bacteria 1701
114 Ga0157380_10001935 3300014326 Bacteria 13767
115 Ga0157380_10005078 3300014326 Bacteria 9193
116 Ga0157380_10020170 3300014326 Bacteria 4980
117 Ga0157380_10063648 3300014326 Bacteria 2958
118 Ga0213876_10026829 3300021384 Bacteria 3039
119 Ga0207647_10080497 3300025904 Bacteria 1953
120 Ga0207647_10126295 3300025904 Bacteria 1505
121 Ga0207643_10015257 3300025908 Bacteria 4180
122 Ga0207684_10016462 3300025910 Bacteria 6348
123 Ga0207684_10018510 3300025910 Bacteria 5963
124 Ga0207707_10000008 3300025912 Bacteria 330313
125 Ga0207660_10006761 3300025917 Bacteria 7424
126 Ga0207660_10258098 3300025917 Bacteria 1377
127 Ga0207652_10002190 3300025921 Bacteria 16698
128 Ga0207652_10030001 3300025921 Bacteria 4552
129 Ga0207646_10012156 3300025922 Bacteria 8283
130 Ga0207681_10002463 3300025923 Bacteria 11740
131 Ga0207650_10000001 3300025925 Bacteria 1545726
132 Ga0207650_10002305 3300025925 Bacteria 13298
133 Ga0207650_10164622 3300025925 Bacteria 1759
134 Ga0207690_10071945 3300025932 Bacteria 2387
135 Ga0207709_10120077 3300025935 Bacteria 1773
136 Ga0207689_10009851 3300025942 Bacteria 8236
137 Ga0207689_10035857 3300025942 Bacteria 4117
138 Ga0207667_10285017 3300025949 Bacteria 1688
139 Ga0207703_10277882 3300026035 Bacteria 1520
140 Ga0207702_10033773 3300026078 Bacteria 4274
141 Ga0207641_10023092 3300026088 Bacteria 5125
142 Ga0207676_10382035 3300026095 Bacteria 1311
143 Ga0207674_10000079 3300026116 Bacteria 102085
144 Ga0207674_10079080 3300026116 Bacteria 3293
145 Ga0207675_100111086 3300026118 Bacteria 2586
146 Ga0207428_10085460 3300027907 Bacteria 2457
147 Ga0268265_10022110 3300028380 Bacteria 4464
148 Ga0268264_10073103 3300028381 Bacteria 2909
149 Ga0307410_10295841 3300031852 Bacteria 1276
150 Ga0307414_10032050 3300032004 Unclassified 3456
151 Ga0395900_0154174 3300037418 Bacteria 2347
152 Ga0242420_013088 3300038996 Bacteria 1410
153 Ga0436365_1618072 3300039437 Bacteria 6223
154 Ga0451576_0045962 3300045051 Bacteria 4598
155 Ga0451576_0200454 3300045051 Bacteria 2085
156 Ga0451576_0318430 3300045051 Bacteria 1628
157 Ga0495580_0140798 3300046472 Bacteria 1672
158 Ga0495610_0016527 3300046512 Bacteria 4243
159 Ga0495632_0022009 3300046519 Bacteria 3425
160 Ga0495598_0000317 3300046537 Bacteria 8621
161 Ga0495621_0032250 3300046539 Unclassified 1800
162 Ga0495672_0031022 3300047320 Bacteria 3341
163 Ga0496102_0047309 3300048905 Bacteria 3908
164 Ga0496108_0061585 3300048911 Unclassified 3158
165 Ga0496110_0338374 3300048913 Bacteria 1371
166 Ga0496112_0128212 3300048915 Bacteria 2508
167 Ga0501247_005032 3300049677 Bacteria 1462
168 nmdc:mga05p37_302793_c1 3300050507 Unclassified 1898
169 nmdc:mga05p37_312924_c1 3300050507 Unclassified 1861
170 nmdc:mga0n895_267839_c1 3300050512 Bacteria 1733
171 nmdc:mga0a205_16819_c1 3300050515 Bacteria 6850

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005471 Ga0070698_100006225 Ga0070698_1000062254 308
2 3300005295 Ga0065707_10125579 Ga0065707_101255793 314
3 3300046539 Ga0495621_0032250 Ga0495621_0032250_797_1753 314
4 3300005458 Ga0070681_10006077 Ga0070681_1000607710 317
5 3300005530 Ga0070679_100012461 Ga0070679_1000124613 318
6 3300005539 Ga0068853_100002055 Ga0068853_10000205512 318
7 3300009147 Ga0114129_10064531 Ga0114129_100645314 325
8 3300005330 Ga0070690_100045400 Ga0070690_1000454002 327
9 3300005459 Ga0068867_100262796 Ga0068867_1002627962 327
10 3300005544 Ga0070686_100007693 Ga0070686_1000076934 327
11 3300014326 Ga0157380_10063648 Ga0157380_100636482 327
12 3300005545 Ga0070695_100157444 Ga0070695_1001574442 328
13 3300050515 nmdc:mga0a205_16819_c1 nmdc:mga0a205_16819_c1_89_1087 328
14 3300005336 Ga0070680_100246681 Ga0070680_1002466811 329
15 3300005353 Ga0070669_100007425 Ga0070669_1000074251 329
16 3300005438 Ga0070701_10157903 Ga0070701_101579031 329
17 3300005459 Ga0068867_100084559 Ga0068867_1000845592 329
18 3300005844 Ga0068862_100024356 Ga0068862_1000243561 329
19 3300009553 Ga0105249_10023019 Ga0105249_100230198 329
20 3300013297 Ga0157378_10027351 Ga0157378_100273515 329
21 3300013308 Ga0157375_10081475 Ga0157375_100814752 329
22 3300014325 Ga0163163_10005449 Ga0163163_100054497 329
23 3300014326 Ga0157380_10005078 Ga0157380_100050781 329
24 3300027907 Ga0207428_10085460 Ga0207428_100854602 329
25 3300028380 Ga0268265_10022110 Ga0268265_100221102 329
26 3300005467 Ga0070706_100026119 Ga0070706_1000261192 330
27 3300005468 Ga0070707_100018365 Ga0070707_1000183654 330
28 3300005471 Ga0070698_100008120 Ga0070698_1000081203 330
29 3300005535 Ga0070684_100032365 Ga0070684_1000323653 330
30 3300005536 Ga0070697_100046726 Ga0070697_1000467263 330
31 3300005546 Ga0070696_100105280 Ga0070696_1001052802 330
32 3300005564 Ga0070664_100036171 Ga0070664_1000361715 330
33 3300005577 Ga0068857_100001329 Ga0068857_10000132916 330
34 3300014325 Ga0163163_10005417 Ga0163163_100054178 330
35 3300025910 Ga0207684_10016462 Ga0207684_100164624 330
36 3300025922 Ga0207646_10012156 Ga0207646_100121566 330
37 3300025942 Ga0207689_10035857 Ga0207689_100358571 330
38 3300026116 Ga0207674_10000079 Ga0207674_1000007972 330
39 3300005336 Ga0070680_100026613 Ga0070680_1000266133 331
40 3300005366 Ga0070659_100014643 Ga0070659_1000146433 331
41 3300025921 Ga0207652_10030001 Ga0207652_100300011 331
42 3300025932 Ga0207690_10071945 Ga0207690_100719453 331
43 3300025949 Ga0207667_10285017 Ga0207667_102850172 331
44 3300005343 Ga0070687_100127276 Ga0070687_1001272761 333
45 3300005290 Ga0065712_10014090 Ga0065712_100140902 336
46 3300010375 Ga0105239_10141971 Ga0105239_101419712 336
47 3300005444 Ga0070694_100059236 Ga0070694_1000592362 342
48 3300005842 Ga0068858_100432567 Ga0068858_1004325671 342
49 3300025904 Ga0207647_10126295 Ga0207647_101262951 342
50 3300048911 Ga0496108_0061585 Ga0496108_0061585_35_1162 342
51 3300005467 Ga0070706_100002918 Ga0070706_1000029183 345
52 3300005471 Ga0070698_100020096 Ga0070698_1000200961 345
53 3300005536 Ga0070697_100001422 Ga0070697_1000014227 345
54 3300005549 Ga0070704_100059037 Ga0070704_1000590373 345
55 3300005518 Ga0070699_100002146 Ga0070699_1000021463 346
56 3300005441 Ga0070700_100005014 Ga0070700_1000050143 350
57 3300026118 Ga0207675_100111086 Ga0207675_1001110863 350
58 3300037418 Ga0395900_0154174 Ga0395900_0154174_684_1829 350
59 3300002459 JGI24751J29686_10000009 JGI24751J29686_1000000916 353
60 3300005331 Ga0070670_100000211 Ga0070670_1000002118 353
61 3300014325 Ga0163163_10002287 Ga0163163_100022878 353
62 3300025925 Ga0207650_10000001 Ga0207650_10000001186 353
63 3300005353 Ga0070669_100034811 Ga0070669_1000348113 355
64 3300005471 Ga0070698_100020954 Ga0070698_1000209548 355
65 3300005578 Ga0068854_100151515 Ga0068854_1001515152 355
66 3300005615 Ga0070702_100068179 Ga0070702_1000681792 355
67 3300005617 Ga0068859_100297303 Ga0068859_1002973032 355
68 3300006931 Ga0097620_100297286 Ga0097620_1002972862 355
69 3300009148 Ga0105243_10027085 Ga0105243_100270854 355
70 3300013297 Ga0157378_10148882 Ga0157378_101488823 355
71 3300026116 Ga0207674_10079080 Ga0207674_100790803 355
72 3300005536 Ga0070697_100089436 Ga0070697_1000894363 356
73 3300005331 Ga0070670_100002378 Ga0070670_1000023784 358
74 3300005353 Ga0070669_100004691 Ga0070669_1000046912 358
75 3300005364 Ga0070673_100258584 Ga0070673_1002585841 358
76 3300005444 Ga0070694_100052435 Ga0070694_1000524352 358
77 3300005445 Ga0070708_100162410 Ga0070708_1001624101 358
78 3300005549 Ga0070704_100311185 Ga0070704_1003111851 358
79 3300005841 Ga0068863_100035564 Ga0068863_1000355643 358
80 3300009093 Ga0105240_10528431 Ga0105240_105284312 358
81 3300025923 Ga0207681_10002463 Ga0207681_100024637 358
82 3300025925 Ga0207650_10002305 Ga0207650_1000230510 358
83 3300026088 Ga0207641_10023092 Ga0207641_100230924 358
84 3300045051 Ga0451576_0045962 Ga0451576_0045962_3310_4428 358
85 3300045051 Ga0451576_0318430 Ga0451576_0318430_13_1170 358
86 3300047320 Ga0495672_0031022 Ga0495672_0031022_1610_2707 358
87 3300005334 Ga0068869_100007774 Ga0068869_1000077743 359
88 3300005441 Ga0070700_100000120 Ga0070700_10000012043 362
89 3300005617 Ga0068859_100048107 Ga0068859_1000481075 362
90 3300006931 Ga0097620_100048104 Ga0097620_1000481043 362
91 3300009147 Ga0114129_10088982 Ga0114129_100889822 362
92 3300013306 Ga0163162_10046978 Ga0163162_100469781 363
93 3300046472 Ga0495580_0140798 Ga0495580_0140798_360_1463 363
94 3300009147 Ga0114129_10010529 Ga0114129_100105292 366
95 3300005336 Ga0070680_100009903 Ga0070680_1000099033 367
96 3300005458 Ga0070681_10000418 Ga0070681_100004187 367
97 3300005530 Ga0070679_100001676 Ga0070679_1000016765 367
98 3300025912 Ga0207707_10000008 Ga0207707_1000000896 367
99 3300025917 Ga0207660_10006761 Ga0207660_100067613 367
100 3300025921 Ga0207652_10002190 Ga0207652_100021905 367
101 3300005843 Ga0068860_100127325 Ga0068860_1001273252 368
102 3300009147 Ga0114129_10059122 Ga0114129_100591224 368
103 3300021384 Ga0213876_10026829 Ga0213876_100268293 368
104 3300026035 Ga0207703_10277882 Ga0207703_102778821 368
105 3300039437 Ga0436365_1618072 Ga0436365_1618072_1691_2806 368
106 3300049677 Ga0501247_005032 Ga0501247_005032_264_1433 368
107 3300050507 nmdc:mga05p37_312924_c1 nmdc:mga05p37_312924_c1_652_1797 368
108 3300045051 Ga0451576_0200454 Ga0451576_0200454_202_1344 371
109 3300048915 Ga0496112_0128212 Ga0496112_0128212_796_1914 372
110 3300005467 Ga0070706_100012434 Ga0070706_1000124345 375
111 3300005468 Ga0070707_100220940 Ga0070707_1002209401 375
112 3300005518 Ga0070699_100049751 Ga0070699_1000497513 375
113 3300005536 Ga0070697_100000150 Ga0070697_10000015016 375
114 3300005985 Ga0081539_10000408 Ga0081539_1000040849 375
115 3300006852 Ga0075433_10024828 Ga0075433_100248286 375
116 3300025910 Ga0207684_10018510 Ga0207684_100185104 375
117 3300025942 Ga0207689_10009851 Ga0207689_100098515 375
118 3300005293 Ga0065715_10107938 Ga0065715_101079383 376
119 3300005330 Ga0070690_100018006 Ga0070690_1000180063 376
120 3300005331 Ga0070670_100071596 Ga0070670_1000715963 376
121 3300005331 Ga0070670_100088883 Ga0070670_1000888832 376
122 3300005337 Ga0070682_100008972 Ga0070682_1000089724 376
123 3300005444 Ga0070694_100194239 Ga0070694_1001942391 376
124 3300005467 Ga0070706_100118876 Ga0070706_1001188761 376
125 3300005471 Ga0070698_100008736 Ga0070698_10000873610 376
126 3300005471 Ga0070698_100200106 Ga0070698_1002001063 376
127 3300005518 Ga0070699_100253930 Ga0070699_1002539302 376
128 3300005544 Ga0070686_100023345 Ga0070686_1000233452 376
129 3300009147 Ga0114129_10712862 Ga0114129_107128621 376
130 3300014325 Ga0163163_10285921 Ga0163163_102859212 376
131 3300014326 Ga0157380_10001935 Ga0157380_100019356 376
132 3300014326 Ga0157380_10020170 Ga0157380_100201703 376
133 3300025925 Ga0207650_10164622 Ga0207650_101646222 376
134 3300026095 Ga0207676_10382035 Ga0207676_103820351 376
135 3300046512 Ga0495610_0016527 Ga0495610_0016527_1911_3080 376
136 3300046519 Ga0495632_0022009 Ga0495632_0022009_594_1757 376
137 3300046537 Ga0495598_0000317 Ga0495598_0000317_3549_4718 376
138 3300050507 nmdc:mga05p37_302793_c1 nmdc:mga05p37_302793_c1_294_1439 376
139 3300009177 Ga0105248_10041527 Ga0105248_100415274 378
140 3300013306 Ga0163162_10006495 Ga0163162_100064959 378
141 3300025904 Ga0207647_10080497 Ga0207647_100804972 378
142 3300000532 CNAas_1000033 CNAas_10000334 379
143 3300005331 Ga0070670_100079768 Ga0070670_1000797684 379
144 3300005345 Ga0070692_10043813 Ga0070692_100438132 379
145 3300005445 Ga0070708_100002930 Ga0070708_1000029303 379
146 3300005546 Ga0070696_100078003 Ga0070696_1000780033 379
147 3300005546 Ga0070696_100127004 Ga0070696_1001270042 379
148 3300005614 Ga0068856_100004074 Ga0068856_10000407414 379
149 3300005617 Ga0068859_100208350 Ga0068859_1002083502 379
150 3300006852 Ga0075433_10022300 Ga0075433_100223002 379
151 3300006852 Ga0075433_10051975 Ga0075433_100519755 379
152 3300006931 Ga0097620_100208361 Ga0097620_1002083612 379
153 3300009147 Ga0114129_10022997 Ga0114129_100229977 379
154 3300009148 Ga0105243_10052085 Ga0105243_100520854 379
155 3300009553 Ga0105249_10081610 Ga0105249_100816102 379
156 3300010375 Ga0105239_10406399 Ga0105239_104063991 379
157 3300013100 Ga0157373_10033377 Ga0157373_100333773 379
158 3300013297 Ga0157378_10266330 Ga0157378_102663302 379
159 3300013306 Ga0163162_10506649 Ga0163162_105066491 379
160 3300014325 Ga0163163_10087524 Ga0163163_100875243 379
161 3300025908 Ga0207643_10015257 Ga0207643_100152572 379
162 3300025917 Ga0207660_10258098 Ga0207660_102580981 379
163 3300025935 Ga0207709_10120077 Ga0207709_101200773 379
164 3300026078 Ga0207702_10033773 Ga0207702_100337732 379
165 3300028381 Ga0268264_10073103 Ga0268264_100731032 379
166 3300031852 Ga0307410_10295841 Ga0307410_102958411 379
167 3300032004 Ga0307414_10032050 Ga0307414_100320503 379
168 3300038996 Ga0242420_013088 Ga0242420_013088_182_1324 379
169 3300048905 Ga0496102_0047309 Ga0496102_0047309_2520_3662 379
170 3300048913 Ga0496110_0338374 Ga0496110_0338374_144_1286 379
171 3300050512 nmdc:mga0n895_267839_c1 nmdc:mga0n895_267839_c1_202_1362 379

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01075

Glyco_transf_9

Glycosyltransferase family 9 (heptosyltransferase)

130

382

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tov-assembly2.cif.gz_B the crystal structure of the glycosyl transferase family 9 from veillonella parvula dsm 2008 0.8439 36 378
3tov-assembly2.cif.gz_B the crystal structure of the glycosyl transferase family 9 from veillonella parvula dsm 2008 0.8325 36 378
3tov-assembly1.cif.gz_A the crystal structure of the glycosyl transferase family 9 from veillonella parvula dsm 2008 0.825 45 378
2h1f-assembly2.cif.gz_B e. coli heptosyltransferase waac with adp 0.7941 46 376
3tov-assembly1.cif.gz_A the crystal structure of the glycosyl transferase family 9 from veillonella parvula dsm 2008 0.7919 45 378
ID Description Score Start End Superfamily
af_P25742_1_146_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8646 53 183 3.40.50.2000
af_P37692_2_151_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8425 47 182 3.40.50.2000
af_P27242_36_183_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8348 40 183 3.40.50.2000
af_I1KVM5_139_276_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.824 59 161 3.40.50.2000
af_P25742_154_333_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8097 203 378 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A7C5QF01-F1-model_v4 Glycosyltransferase family 9 protein 0.9474 46 162 GO:0005829
GO:0008713
GO:0009244
AF-A0A7C2L623-F1-model_v4 Rhodanese domain-containing protein 0.945 33 273 GO:0005829
GO:0008713
GO:0009244
AF-A0A7V3CX20-F1-model_v4 ADP-heptose--LPS heptosyltransferase 0.9334 45 150 GO:0005829
GO:0008713
GO:0009244
AF-A0A7Y8J2R6-F1-model_v4 Glycosyltransferase family 9 protein 0.9209 37 214 GO:0005829
GO:0008713
GO:0009244
AF-A0A3B8U9E4-F1-model_v4 Putative lipopolysaccharide heptosyltransferase III 0.9194 39 121 GO:0005829
GO:0008713
GO:0009244

Feature Viewer

pLDDT pTM Quality
86.97 0.85 High
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Predicted Structure (AlphaFold2)

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