F256885

General Info

Members Datasets Scaffolds Average Seq Length
170 128 340 339

Family's Representative Sequence

Representative Sequence 3300025908|Ga0207643_10134026|Ga0207643_101340262
Length 387
Sequence VSDGVALLLMFALLGANAFFVGAEFSLISARRDRLEALHAEGASGAGTVLRASEHLSMMLAAAQLGITICSLALGSLGEPAVAHQLEVVLEPIGVPSFLIHPIAFVVALTIVTILHIVIGEMVPKNIAIAGPERTSLWLVPALVAFLKVTRPVIVVLNWVANHILKAFGVTPVDERESAYTPQEIAGMLSESRAEGLLDASQTRRLTQALSSAEHTVADVLIPLDRVTVLPPNPTVGAVEEAVARTGFSRFPVQAPTAPDAHPRLGTDAMEPGTTPITPEGENTDHAPVVELAGYLHVKDVLDLGDSDDEAADHPVPSERVRALPEISLSAPVDEALAALRREGSHLARAVDAEGSTVGLVAMEDLVEEYVGTVRDSTHVTRSGARS

Samples

Sample ID Description Type Environment
1 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
23 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
24 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
25 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
26 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
27 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
28 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
29 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
43 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
44 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
45 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
46 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
47 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
48 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
52 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
53 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
54 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
55 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
56 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
57 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
58 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
59 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
60 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
61 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
62 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
63 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
64 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
65 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
70 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
71 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
74 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
75 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
76 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
77 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
78 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
91 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
92 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
93 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
98 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
99 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
100 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
101 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
106 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
107 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
108 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
109 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
110 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
111 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
114 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
115 2547132424 Nocardia nova SH22a Isolate Unclassified
116 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
117 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
118 2643221692 Nocardia sp. Root136 Isolate Unclassified
119 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
120 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
121 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
122 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
123 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
124 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
125 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
126 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
127 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
128 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90
Metatranscriptomes 1.18
Isolates 8.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.35
Nodule 0
Rhizoplane 4.71
Rhizosphere 80.59
Stem 0
Stem Tuber 0.59
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207643_10134026 3300025908 Bacteria 1476
2 rootH2_10059900 3300003320 Bacteria 2143
3 JGI25407J50210_10007438 3300003373 Bacteria 2743
4 Ga0070658_10069062 3300005327 Bacteria 2890
5 Ga0070683_100007434 3300005329 Bacteria 9257
6 Ga0070683_100022704 3300005329 Bacteria 5611
7 Ga0070668_100022250 3300005347 Bacteria 4791
8 Ga0070714_100106060 3300005435 Bacteria 2482
9 Ga0070714_100151200 3300005435 Bacteria 2092
10 Ga0070663_100004864 3300005455 Bacteria 7925
11 Ga0070681_10144005 3300005458 Bacteria 2313
12 Ga0070679_100293937 3300005530 Bacteria 1576
13 Ga0070684_100003308 3300005535 Bacteria 12077
14 Ga0070665_100482196 3300005548 Bacteria 1251
15 Ga0068864_100000907 3300005618 Bacteria 24894
16 Ga0081455_10000021 3300005937 Bacteria 160055
17 Ga0081538_10000154 3300005981 Bacteria 71483
18 Ga0081538_10035318 3300005981 Bacteria 3285
19 Ga0081539_10039515 3300005985 Bacteria 2782
20 Ga0070717_10069957 3300006028 Bacteria 2924
21 Ga0075428_100127413 3300006844 Bacteria 2770
22 Ga0075428_100243353 3300006844 Bacteria 1941
23 Ga0075428_100535057 3300006844 Bacteria 1253
24 Ga0075431_100000593 3300006847 Bacteria 30586
25 Ga0075431_100113505 3300006847 Bacteria 2797
26 Ga0075431_100529544 3300006847 Bacteria 1167
27 Ga0075429_100150516 3300006880 Bacteria 2037
28 Ga0105248_10089714 3300009177 Bacteria 3461
29 Ga0163163_10018242 3300014325 Bacteria 6564
30 Ga0157379_10024353 3300014968 Bacteria 5374
31 Ga0157379_10026713 3300014968 Bacteria 5139
32 Ga0163161_10219657 3300017792 Bacteria 1471
33 Ga0206354_10308242 3300020081 Bacteria 2437
34 Ga0213873_10001799 3300021358 Bacteria 3618
35 Ga0213875_10000060 3300021388 Bacteria 135020
36 Ga0213875_10004002 3300021388 Bacteria 8224
37 Ga0224712_10005662 3300022467 Bacteria 3504
38 Ga0207707_10126324 3300025912 Bacteria 2237
39 Ga0207693_10201034 3300025915 Bacteria 1567
40 Ga0207649_10052461 3300025920 Bacteria 2530
41 Ga0207664_10092519 3300025929 Bacteria 2482
42 Ga0207711_10009117 3300025941 Bacteria 8284
43 Ga0207711_10105709 3300025941 Bacteria 2497
44 Ga0207661_10005021 3300025944 Bacteria 9277
45 Ga0207668_10005707 3300025972 Bacteria 7332
46 Ga0207703_10450400 3300026035 Bacteria 1202
47 Ga0207678_10000284 3300026067 Bacteria 46023
48 Ga0207676_10039390 3300026095 Bacteria 3614
49 Ga0207674_10057248 3300026116 Bacteria 3951
50 Ga0207698_10035680 3300026142 Bacteria 3641
51 Ga0268266_10196156 3300028379 Bacteria 1846
52 Ga0307515_10014775 3300028794 Bacteria 14443
53 Ga0307515_10104609 3300028794 Bacteria 3379
54 Ga0265327_10000185 3300031251 Bacteria 131884
55 Ga0265327_10064357 3300031251 Bacteria 1858
56 Ga0307513_10151019 3300031456 Bacteria 2231
57 Ga0307405_10001600 3300031731 Bacteria 9618
58 Ga0307518_10000194 3300031838 Bacteria 46124
59 Ga0307410_10045029 3300031852 Bacteria 2935
60 Ga0307406_10175972 3300031901 Bacteria 1553
61 Ga0307409_100001931 3300031995 Bacteria 10592
62 Ga0307409_100003570 3300031995 Bacteria 8486
63 Ga0307409_100377140 3300031995 Bacteria 1347
64 Ga0307416_100000910 3300032002 Bacteria 15600
65 Ga0307416_100100698 3300032002 Bacteria 2514
66 Ga0307415_100000008 3300032126 Bacteria 90898
67 Ga0307507_10005719 3300033179 Bacteria 20083
68 Ga0307510_10037358 3300033180 Bacteria 5388
69 Ga0373943_0160639 3300035170 Bacteria 1223
70 Ga0373955_0032787 3300035172 Bacteria 2731
71 Ga0436364_0022317 3300037853 Bacteria 87829
72 Ga0436364_0530883 3300037853 Bacteria 18584
73 Ga0436365_1929099 3300039437 Bacteria 5221
74 Ga0436362_0749986 3300039453 Bacteria 5378
75 Ga0466972_0003520 3300044658 Bacteria 7773
76 Ga0466965_0046612 3300044683 Bacteria 2146
77 Ga0466963_0000498 3300044694 Bacteria 18302
78 Ga0466968_0043248 3300044735 Bacteria 1906
79 Ga0466957_0001695 3300044842 Bacteria 11580
80 Ga0466959_0001738 3300045049 Bacteria 13546
81 Ga0466959_0155207 3300045049 Bacteria 1611
82 Ga0466958_0000272 3300045836 Bacteria 19930
83 Ga0466967_0000575 3300045976 Bacteria 18088
84 Ga0466967_0021516 3300045976 Bacteria 5242
85 Ga0466967_0076702 3300045976 Bacteria 3007
86 Ga0495629_0008453 3300046459 Bacteria 7578
87 Ga0495629_0112594 3300046459 Bacteria 1897
88 Ga0495630_0229579 3300046517 Bacteria 1418
89 Ga0495680_0029663 3300047322 Bacteria 4477
90 Ga0495683_0002816 3300047323 Bacteria 10311
91 Ga0496103_0001876 3300048906 Bacteria 13663
92 Ga0496104_0146631 3300048907 Bacteria 2266
93 Ga0496108_0018690 3300048911 Bacteria 5679
94 Ga0496108_0428877 3300048911 Bacteria 1155
95 Ga0496109_0023734 3300048912 Bacteria 5443
96 Ga0496110_0000470 3300048913 Bacteria 27425
97 Ga0496111_0030788 3300048914 Bacteria 3817
98 Ga0496112_0035479 3300048915 Bacteria 4858
99 Ga0501031_0009611 3300049568 Bacteria 6296
100 Ga0501031_0098323 3300049568 Bacteria 1910
101 Ga0501033_0071176 3300049570 Bacteria 2555
102 Ga0501034_0027761 3300049571 Bacteria 5755
103 Ga0501034_0082505 3300049571 Bacteria 3216
104 Ga0501036_0000959 3300049572 Bacteria 21735
105 Ga0501036_0031796 3300049572 Bacteria 4459
106 Ga0501036_0041782 3300049572 Bacteria 3880
107 Ga0501037_0007524 3300049573 Bacteria 7975
108 Ga0501037_0015957 3300049573 Bacteria 5529
109 Ga0501038_0003174 3300049574 Bacteria 15329
110 Ga0501038_0035878 3300049574 Bacteria 4352
111 Ga0501038_0178992 3300049574 Bacteria 1712
112 Ga0501039_0028883 3300049575 Bacteria 4270
113 Ga0501039_0068185 3300049575 Bacteria 2762
114 Ga0501039_0391895 3300049575 Bacteria 1091
115 Ga0501042_0042467 3300049578 Bacteria 3237
116 Ga0501042_0156211 3300049578 Bacteria 1645
117 Ga0501043_0002388 3300049579 Bacteria 15914
118 Ga0501043_0009370 3300049579 Bacteria 7690
119 Ga0501043_0181168 3300049579 Bacteria 1641
120 Ga0501046_0120441 3300049580 Bacteria 1997
121 Ga0501046_0146717 3300049580 Bacteria 1781
122 Ga0501047_0000099 3300049581 Bacteria 106077
123 Ga0501047_0003007 3300049581 Bacteria 16006
124 Ga0501047_0107407 3300049581 Bacteria 2672
125 Ga0501048_0000340 3300049582 Bacteria 32245
126 Ga0501048_0004519 3300049582 Bacteria 10594
127 Ga0501068_0041018 3300049584 Bacteria 2781
128 Ga0501069_0120416 3300049585 Bacteria 1499
129 Ga0501071_0057072 3300049587 Bacteria 2821
130 Ga0501073_0006718 3300049589 Bacteria 8565
131 Ga0501074_0000679 3300049590 Bacteria 21272
132 Ga0501074_0070678 3300049590 Bacteria 2509
133 Ga0501075_0012253 3300049591 Bacteria 6088
134 Ga0501076_0015333 3300049592 Bacteria 5790
135 Ga0501077_0030568 3300049593 Bacteria 3427
136 Ga0501079_0084765 3300049741 Bacteria 2451
137 Ga0501080_0145679 3300049742 Bacteria 2189
138 Ga0501081_0058814 3300049743 Bacteria 2660
139 Ga0501083_0111645 3300049744 Bacteria 1797
140 Ga0501044_0044485 3300049823 Bacteria 4607
141 Ga0501044_0322289 3300049823 Bacteria 1469
142 Ga0501045_0035784 3300049824 Bacteria 3605
143 Ga0501045_0173184 3300049824 Bacteria 1608
144 nmdc:mga05p37_210738_c1 3300050507 Bacteria 2349
145 nmdc:mga09592_386979_c1 3300050508 Bacteria 1209
146 nmdc:mga06r32_23610_c1 3300050510 Bacteria 5693
147 nmdc:mga06r32_401_c2 3300050510 Bacteria 7735
148 nmdc:mga06r32_43264_c1 3300050510 Bacteria 4285
149 Ga0500646_0000203 3300053090 Bacteria 17782
150 Ga0500641_0073105 3300053096 Bacteria 1446
151 Ga0500556_0000272 3300053104 Bacteria 40585
152 Ga0500559_0007786 3300053136 Bacteria 4732
153 Ga0501084_0018015 3300054114 Bacteria 5881
154 Ga0501082_0211876 3300060353 Bacteria 1685
155 Ga0530510_0053701 3300061734 Bacteria 2911
156 2515852547 2515154155 Bacteria 7985436
157 2548695488 2547132424 Bacteria 8348532
158 2552108020 2551306166 Bacteria 9731570
159 2586061409 2585427649 Bacteria 9053857
160 2644512329 2643221692 Bacteria 7282860
161 2676474551 2675903058 Bacteria 6822861
162 2809589497 2808606522 Bacteria 9488490
163 2827632975 2827628540 Bacteria 6858585
164 2861528204 2861520306 Bacteria 8348283
165 2899370807 2899370129 Bacteria 6781179
166 2915772228 2915768154 Bacteria 8424322
167 2917737949 2917736166 Bacteria 9690793
168 2919714413 2919713450 Bacteria 7431245
169 8003323509 8003314358 Bacteria 10575343
170 8057570455 8057568493 Bacteria 7221719
171 Ga0207643_10134026
172 rootH2_10059900
173 JGI25407J50210_10007438
174 Ga0070658_10069062
175 Ga0070683_100007434
176 Ga0070683_100022704
177 Ga0070668_100022250
178 Ga0070714_100106060
179 Ga0070714_100151200
180 Ga0070663_100004864
181 Ga0070681_10144005
182 Ga0070679_100293937
183 Ga0070684_100003308
184 Ga0070665_100482196
185 Ga0068864_100000907
186 Ga0081455_10000021
187 Ga0081538_10000154
188 Ga0081538_10035318
189 Ga0081539_10039515
190 Ga0070717_10069957
191 Ga0075428_100127413
192 Ga0075428_100243353
193 Ga0075428_100535057
194 Ga0075431_100000593
195 Ga0075431_100113505
196 Ga0075431_100529544
197 Ga0075429_100150516
198 Ga0105248_10089714
199 Ga0163163_10018242
200 Ga0157379_10024353
201 Ga0157379_10026713
202 Ga0163161_10219657
203 Ga0206354_10308242
204 Ga0213873_10001799
205 Ga0213875_10000060
206 Ga0213875_10004002
207 Ga0224712_10005662
208 Ga0207707_10126324
209 Ga0207693_10201034
210 Ga0207649_10052461
211 Ga0207664_10092519
212 Ga0207711_10009117
213 Ga0207711_10105709
214 Ga0207661_10005021
215 Ga0207668_10005707
216 Ga0207703_10450400
217 Ga0207678_10000284
218 Ga0207676_10039390
219 Ga0207674_10057248
220 Ga0207698_10035680
221 Ga0268266_10196156
222 Ga0307515_10014775
223 Ga0307515_10104609
224 Ga0265327_10000185
225 Ga0265327_10064357
226 Ga0307513_10151019
227 Ga0307405_10001600
228 Ga0307518_10000194
229 Ga0307410_10045029
230 Ga0307406_10175972
231 Ga0307409_100001931
232 Ga0307409_100003570
233 Ga0307409_100377140
234 Ga0307416_100000910
235 Ga0307416_100100698
236 Ga0307415_100000008
237 Ga0307507_10005719
238 Ga0307510_10037358
239 Ga0373943_0160639
240 Ga0373955_0032787
241 Ga0436364_0022317
242 Ga0436364_0530883
243 Ga0436365_1929099
244 Ga0436362_0749986
245 Ga0466972_0003520
246 Ga0466965_0046612
247 Ga0466963_0000498
248 Ga0466968_0043248
249 Ga0466957_0001695
250 Ga0466959_0001738
251 Ga0466959_0155207
252 Ga0466958_0000272
253 Ga0466967_0000575
254 Ga0466967_0021516
255 Ga0466967_0076702
256 Ga0495629_0008453
257 Ga0495629_0112594
258 Ga0495630_0229579
259 Ga0495680_0029663
260 Ga0495683_0002816
261 Ga0496103_0001876
262 Ga0496104_0146631
263 Ga0496108_0018690
264 Ga0496108_0428877
265 Ga0496109_0023734
266 Ga0496110_0000470
267 Ga0496111_0030788
268 Ga0496112_0035479
269 Ga0501031_0009611
270 Ga0501031_0098323
271 Ga0501033_0071176
272 Ga0501034_0027761
273 Ga0501034_0082505
274 Ga0501036_0000959
275 Ga0501036_0031796
276 Ga0501036_0041782
277 Ga0501037_0007524
278 Ga0501037_0015957
279 Ga0501038_0003174
280 Ga0501038_0035878
281 Ga0501038_0178992
282 Ga0501039_0028883
283 Ga0501039_0068185
284 Ga0501039_0391895
285 Ga0501042_0042467
286 Ga0501042_0156211
287 Ga0501043_0002388
288 Ga0501043_0009370
289 Ga0501043_0181168
290 Ga0501046_0120441
291 Ga0501046_0146717
292 Ga0501047_0000099
293 Ga0501047_0003007
294 Ga0501047_0107407
295 Ga0501048_0000340
296 Ga0501048_0004519
297 Ga0501068_0041018
298 Ga0501069_0120416
299 Ga0501071_0057072
300 Ga0501073_0006718
301 Ga0501074_0000679
302 Ga0501074_0070678
303 Ga0501075_0012253
304 Ga0501076_0015333
305 Ga0501077_0030568
306 Ga0501079_0084765
307 Ga0501080_0145679
308 Ga0501081_0058814
309 Ga0501083_0111645
310 Ga0501044_0044485
311 Ga0501044_0322289
312 Ga0501045_0035784
313 Ga0501045_0173184
314 nmdc:mga05p37_210738_c1
315 nmdc:mga09592_386979_c1
316 nmdc:mga06r32_23610_c1
317 nmdc:mga06r32_401_c2
318 nmdc:mga06r32_43264_c1
319 Ga0500646_0000203
320 Ga0500641_0073105
321 Ga0500556_0000272
322 Ga0500559_0007786
323 Ga0501084_0018015
324 Ga0501082_0211876
325 Ga0530510_0053701
326 2515852547
327 2548695488
328 2552108020
329 2586061409
330 2644512329
331 2676474551
332 2809589497
333 2827632975
334 2861528204
335 2899370807
336 2915772228
337 2917737949
338 2919714413
339 8003323509
340 8057570455

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01595

CNNM

Cyclin M transmembrane N-terminal domain

8

202

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cfi-assembly1.cif.gz_A-2 structure of the cbs domain of the bacterial cnnm/corc family mg2+ transporter in complex with atp 0.8843 203 334
7msu-assembly1.cif.gz_A-2 crystal structure of an archaeal cnnm, mtcorb, cbs-pair domain in complex with mg2+-atp 0.8718 215 332
3nqr-assembly1.cif.gz_D-2 a putative cbs domain-containing protein from salmonella typhimurium lt2 0.8639 215 330
3lfr-assembly1.cif.gz_A the crystal structure of a cbs domain from a putative metal ion transporter bound to amp from pseudomonas syringae to 1.55a 0.8548 215 330
5yz2-assembly1.cif.gz_A the cystathionine-beta-synthase (cbs) domain of magnesium and cobalt efflux protein corc in complex with both c2'- and c3'-endo amp 0.8539 211 335
ID Description Score Start End Superfamily
af_P33360_240_308_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9234 288 329 3.10.580.10
1vr9B01 Alpha Beta;Alpha-Beta Complex;CBS domain Like; 0.8868 289 333 3.90.1280.20
af_Q2FZY0_176_330_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.8603 198 338 3.10.580.10
af_P9WLQ7_195_343_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.853 198 337 3.10.580.10
af_Q57976_16_153_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.8486 210 335 3.10.580.10
ID Description Score Start End GO Terms
AF-A0A353LP18-F1-model_v4 CNNM transmembrane domain-containing protein 0.9531 2 161 GO:0005886
AF-A0A352S860-F1-model_v4 CNNM transmembrane domain-containing protein 0.9517 5 175 GO:0016020
AF-A0A521UWP7-F1-model_v4 DUF21 domain-containing protein 0.9502 1 157 GO:0016020
AF-A0A4D4LAK7-F1-model_v4 CBS domain-containing protein 0.9434 244 338
AF-A0A352S860-F1-model_v4 CNNM transmembrane domain-containing protein 0.9359 5 175 GO:0016020

Map