F255544

General Info

Members Datasets Scaffolds Average Seq Length
169 136 338 338

Family's Representative Sequence

Representative Sequence 3300049574|Ga0501038_0000469|Ga0501038_0000469_19955_21058
Length 367
Sequence MEHTQTSDERGGPAVPAPGRASVGRRLVRAFVLTSPGEYAVQEVPAPVAAPGEVVVDVERVGVCGTDVEFFTGAMAYLHEGHSAYPMRPGHEWAGRVSAVGDGVDEGWLGRRVMGDTMLGCGRCRRCLRGRQHVCEQRQEVGIRGARAGALAEQLAVPADSLHVLPDSVDSVLGALVEPGGNALRAARAAAPRPGDRALVLGPGTIGLLVALFLRSLGAEVHLMGPTDNSLTFARTLGFEHVWAESSLPELPFDAVVDASNAAHLPATALELIEPGGRLVYIGLAGEPSRIDTRALVLKDVTAVGVLSASPALDATIEAYASGAVDPRPLVAATVGLDEVGSVLAGERPSGAGPGPKIHVDPNLYPN

Samples

Sample ID Description Type Environment
1 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
40 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
61 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
64 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
65 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
66 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
69 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
73 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
76 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
82 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
83 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
84 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
85 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
86 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
87 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
88 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
89 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
90 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
91 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
92 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
93 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
94 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
107 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
108 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
109 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
110 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
111 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
112 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
113 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
114 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
115 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
116 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
117 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
118 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
119 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
120 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
121 2867428634 Streptomyces sp. RP5T Isolate Unclassified
122 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
123 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
124 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
125 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
126 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
127 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
128 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
129 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
130 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
131 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
132 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
133 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
134 8002775197 Frankia nepalensis CN7 Isolate Nodule
135 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
136 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 85.8
Metatranscriptomes 0
Isolates 14.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.14
Nodule 0.59
Rhizoplane 8.88
Rhizosphere 75.74
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501038_0000469 3300049574 Bacteria 35427
2 JGI24739J22299_10042049 3300001989 Bacteria 1517
3 JGI24737J22298_10035428 3300001990 Bacteria 1544
4 Ga0070682_100126237 3300005337 Bacteria 1725
5 Ga0068868_100018235 3300005338 Bacteria 5243
6 Ga0070687_100005262 3300005343 Bacteria 5230
7 Ga0070668_100000203 3300005347 Bacteria 39124
8 Ga0070709_10179151 3300005434 Bacteria 1487
9 Ga0070714_100025228 3300005435 Bacteria 4905
10 Ga0070713_100012935 3300005436 Bacteria 6142
11 Ga0070713_100020104 3300005436 Bacteria 5112
12 Ga0070701_10177635 3300005438 Bacteria 1244
13 Ga0070663_100013304 3300005455 Bacteria 5242
14 Ga0068855_100275327 3300005563 Bacteria 1870
15 Ga0068854_100046250 3300005578 Bacteria 3098
16 Ga0068856_100413416 3300005614 Bacteria 1369
17 Ga0070702_100013706 3300005615 Bacteria 4100
18 Ga0068852_100054510 3300005616 Bacteria 3447
19 Ga0068852_100342000 3300005616 Bacteria 1458
20 Ga0068866_10041816 3300005718 Bacteria 2277
21 Ga0068866_10113432 3300005718 Bacteria 1516
22 Ga0068861_100091032 3300005719 Bacteria 2407
23 Ga0068861_100147725 3300005719 Bacteria 1925
24 Ga0068860_100053626 3300005843 Bacteria 3834
25 Ga0068860_100546523 3300005843 Bacteria 1160
26 Ga0068862_100073969 3300005844 Bacteria 2945
27 Ga0081455_10017377 3300005937 Bacteria 6900
28 Ga0081455_10047936 3300005937 Bacteria 3695
29 Ga0081455_10088324 3300005937 Bacteria 2519
30 Ga0081539_10001745 3300005985 Bacteria 34699
31 Ga0070717_10015493 3300006028 Bacteria 5891
32 Ga0070717_10050193 3300006028 Bacteria 3427
33 Ga0075368_10005212 3300006042 Bacteria 4461
34 Ga0075363_100003931 3300006048 Bacteria 6413
35 Ga0075367_10007315 3300006178 Bacteria 5646
36 Ga0075429_100234675 3300006880 Bacteria 1607
37 Ga0068865_100041091 3300006881 Bacteria 3146
38 Ga0105245_10009945 3300009098 Bacteria 8283
39 Ga0105243_10020321 3300009148 Bacteria 5036
40 Ga0105243_10039153 3300009148 Bacteria 3695
41 Ga0105238_10218274 3300009551 Bacteria 1883
42 Ga0105249_10336459 3300009553 Bacteria 1525
43 Ga0105246_10073145 3300011119 Bacteria 2419
44 Ga0157369_10110808 3300013105 Bacteria 2918
45 Ga0163162_10121411 3300013306 Bacteria 2717
46 Ga0182008_10012514 3300014497 Bacteria 4477
47 Ga0157379_10333605 3300014968 Bacteria 1386
48 Ga0182007_10000862 3300015262 Bacteria 16823
49 Ga0183367_1004 3300015688 Bacteria 716880
50 Ga0163161_10315148 3300017792 Bacteria 1235
51 Ga0207688_10059266 3300025901 Bacteria 2156
52 Ga0207688_10084497 3300025901 Bacteria 1817
53 Ga0207647_10044156 3300025904 Bacteria 2786
54 Ga0207662_10064981 3300025918 Bacteria 2197
55 Ga0207687_10066708 3300025927 Bacteria 2558
56 Ga0207706_10019288 3300025933 Bacteria 6133
57 Ga0207706_10436293 3300025933 Bacteria 1134
58 Ga0207709_10102494 3300025935 Bacteria 1895
59 Ga0207704_10036845 3300025938 Bacteria 2818
60 Ga0207689_10165294 3300025942 Bacteria 1823
61 Ga0207712_10114468 3300025961 Bacteria 2029
62 Ga0207668_10001147 3300025972 Bacteria 15756
63 Ga0207677_10053606 3300026023 Bacteria 2746
64 Ga0207678_10000441 3300026067 Bacteria 37760
65 Ga0207702_10155752 3300026078 Bacteria 2083
66 Ga0207702_10292036 3300026078 Bacteria 1545
67 Ga0207702_10300349 3300026078 Bacteria 1524
68 Ga0207674_10252921 3300026116 Bacteria 1709
69 Ga0207675_100036658 3300026118 Bacteria 4574
70 Ga0207698_10396179 3300026142 Bacteria 1318
71 Ga0268265_10056330 3300028380 Bacteria 2990
72 Ga0268264_10158967 3300028381 Bacteria 2033
73 Ga0307515_10049119 3300028794 Bacteria 6360
74 Ga0307515_10054860 3300028794 Bacteria 5839
75 Ga0307515_10058808 3300028794 Bacteria 5526
76 Ga0307512_10004022 3300030522 Bacteria 16403
77 Ga0307513_10116461 3300031456 Bacteria 2651
78 Ga0307513_10268930 3300031456 Bacteria 1489
79 Ga0307408_100098738 3300031548 Bacteria 2220
80 Ga0307508_10009165 3300031616 Bacteria 9114
81 Ga0307405_10010735 3300031731 Bacteria 4761
82 Ga0307413_10002202 3300031824 Bacteria 7843
83 Ga0307410_10001297 3300031852 Bacteria 11146
84 Ga0307406_10004382 3300031901 Bacteria 7675
85 Ga0307407_10011937 3300031903 Bacteria 4157
86 Ga0307409_100018511 3300031995 Bacteria 4685
87 Ga0307416_100138386 3300032002 Bacteria 2207
88 Ga0307416_100164312 3300032002 Bacteria 2057
89 Ga0307414_10003185 3300032004 Bacteria 8725
90 Ga0307411_10003771 3300032005 Bacteria 7116
91 Ga0307415_100062604 3300032126 Bacteria 2581
92 Ga0307510_10002773 3300033180 Bacteria 20078
93 Ga0395899_0020175 3300037312 Bacteria 5057
94 Ga0395900_0086413 3300037418 Bacteria 3223
95 Ga0395900_0524530 3300037418 Bacteria 1132
96 Ga0395898_0061143 3300037466 Bacteria 3659
97 Ga0395905_0016190 3300037471 Bacteria 7087
98 Ga0395901_0051056 3300038443 Bacteria 4298
99 Ga0395901_0093618 3300038443 Bacteria 3146
100 Ga0451791_0572982 3300041451 Bacteria 1672
101 Ga0451853_0927201 3300041512 Bacteria 4025
102 Ga0439448_0031076 3300042005 Bacteria 1696
103 Ga0439449_0000536 3300042007 Bacteria 14163
104 Ga0439457_001993 3300042014 Bacteria 5998
105 Ga0450903_000051 3300042138 Bacteria 23526
106 Ga0466972_0002726 3300044658 Bacteria 8740
107 Ga0466965_0081081 3300044683 Bacteria 1640
108 Ga0466966_0051558 3300044684 Bacteria 2616
109 Ga0466966_0121337 3300044684 Bacteria 1605
110 Ga0466966_0168858 3300044684 Bacteria 1330
111 Ga0466963_0058830 3300044694 Bacteria 2564
112 Ga0466963_0226829 3300044694 Bacteria 1309
113 Ga0466971_0020486 3300044719 Bacteria 2940
114 Ga0466971_0055281 3300044719 Bacteria 1789
115 Ga0466970_0125413 3300044765 Bacteria 1408
116 Ga0466957_0123400 3300044842 Bacteria 1653
117 Ga0466957_0177705 3300044842 Bacteria 1389
118 Ga0466960_0059612 3300044901 Bacteria 1868
119 Ga0466959_0072114 3300045049 Bacteria 2500
120 Ga0466959_0079145 3300045049 Bacteria 2370
121 Ga0466958_0142520 3300045836 Bacteria 1509
122 Ga0466958_0290553 3300045836 Bacteria 1049
123 Ga0466967_0138778 3300045976 Bacteria 2263
124 Ga0466967_0232113 3300045976 Bacteria 1757
125 Ga0496104_0221575 3300048907 Bacteria 1804
126 Ga0496106_0014309 3300048909 Bacteria 5863
127 Ga0496108_0109490 3300048911 Bacteria 2361
128 Ga0496108_0155735 3300048911 Bacteria 1973
129 Ga0496108_0264725 3300048911 Bacteria 1496
130 Ga0496109_0014421 3300048912 Bacteria 6877
131 Ga0496109_0047679 3300048912 Bacteria 3896
132 Ga0496109_0066022 3300048912 Bacteria 3312
133 Ga0496110_0077284 3300048913 Bacteria 2961
134 Ga0496110_0191054 3300048913 Bacteria 1860
135 Ga0496111_0067616 3300048914 Bacteria 2596
136 Ga0496113_0208750 3300048916 Bacteria 1554
137 Ga0496114_0162437 3300048917 Bacteria 1943
138 Ga0496114_0261588 3300048917 Bacteria 1523
139 Ga0501067_0034608 3300049583 Bacteria 2804
140 Ga0501035_0273418 3300049822 Bacteria 1429
141 nmdc:mga03n38_15759_c1 3300050490 Bacteria 2925
142 nmdc:mga0yw44_141396_c1 3300050492 Bacteria 1564
143 nmdc:mga06z11_6178_c1 3300050494 Bacteria 4854
144 nmdc:mga04h51_2342_c1 3300050495 Bacteria 4486
145 nmdc:mga0a205_433476_c1 3300050515 Bacteria 1176
146 2585304242 2582581313 Bacteria 10042643
147 2585320718 2582581314 Bacteria 11452267
148 2785339420 2784746763 Bacteria 9783172
149 2786674670 2786546132 Bacteria 10419719
150 2808917904 2808606375 Bacteria 9466072
151 2837269965 2837268691 Bacteria 7850704
152 2862283906 2862281513 Bacteria 9621493
153 2863407780 2863404153 Bacteria 9672205
154 2867430910 2867428634 Bacteria 9590268
155 2947232264 2947224130 Bacteria 9938529
156 2954008286 2954002825 Bacteria 9173742
157 2954680732 2954673503 Bacteria 9685905
158 2954683421 2954682443 Bacteria 9862841
159 2954712844 2954711539 Bacteria 10867210
160 2954722801 2954721474 Bacteria 10456478
161 2954739027 2954731030 Bacteria 10243860
162 2954741713 2954740390 Bacteria 10229294
163 2954757885 2954749733 Bacteria 10366972
164 2954760692 2954759201 Bacteria 9358192
165 2990067782 2990059506 Bacteria 9321252
166 3003008029 3002998708 Bacteria 11715108
167 8002783249 8002775197 Bacteria 10728764
168 8003317507 8003314358 Bacteria 10575343
169 8048411319 8048406513 Bacteria 8936924
170 Ga0501038_0000469
171 JGI24739J22299_10042049
172 JGI24737J22298_10035428
173 Ga0070682_100126237
174 Ga0068868_100018235
175 Ga0070687_100005262
176 Ga0070668_100000203
177 Ga0070709_10179151
178 Ga0070714_100025228
179 Ga0070713_100012935
180 Ga0070713_100020104
181 Ga0070701_10177635
182 Ga0070663_100013304
183 Ga0068855_100275327
184 Ga0068854_100046250
185 Ga0068856_100413416
186 Ga0070702_100013706
187 Ga0068852_100054510
188 Ga0068852_100342000
189 Ga0068866_10041816
190 Ga0068866_10113432
191 Ga0068861_100091032
192 Ga0068861_100147725
193 Ga0068860_100053626
194 Ga0068860_100546523
195 Ga0068862_100073969
196 Ga0081455_10017377
197 Ga0081455_10047936
198 Ga0081455_10088324
199 Ga0081539_10001745
200 Ga0070717_10015493
201 Ga0070717_10050193
202 Ga0075368_10005212
203 Ga0075363_100003931
204 Ga0075367_10007315
205 Ga0075429_100234675
206 Ga0068865_100041091
207 Ga0105245_10009945
208 Ga0105243_10020321
209 Ga0105243_10039153
210 Ga0105238_10218274
211 Ga0105249_10336459
212 Ga0105246_10073145
213 Ga0157369_10110808
214 Ga0163162_10121411
215 Ga0182008_10012514
216 Ga0157379_10333605
217 Ga0182007_10000862
218 Ga0183367_1004
219 Ga0163161_10315148
220 Ga0207688_10059266
221 Ga0207688_10084497
222 Ga0207647_10044156
223 Ga0207662_10064981
224 Ga0207687_10066708
225 Ga0207706_10019288
226 Ga0207706_10436293
227 Ga0207709_10102494
228 Ga0207704_10036845
229 Ga0207689_10165294
230 Ga0207712_10114468
231 Ga0207668_10001147
232 Ga0207677_10053606
233 Ga0207678_10000441
234 Ga0207702_10155752
235 Ga0207702_10292036
236 Ga0207702_10300349
237 Ga0207674_10252921
238 Ga0207675_100036658
239 Ga0207698_10396179
240 Ga0268265_10056330
241 Ga0268264_10158967
242 Ga0307515_10049119
243 Ga0307515_10054860
244 Ga0307515_10058808
245 Ga0307512_10004022
246 Ga0307513_10116461
247 Ga0307513_10268930
248 Ga0307408_100098738
249 Ga0307508_10009165
250 Ga0307405_10010735
251 Ga0307413_10002202
252 Ga0307410_10001297
253 Ga0307406_10004382
254 Ga0307407_10011937
255 Ga0307409_100018511
256 Ga0307416_100138386
257 Ga0307416_100164312
258 Ga0307414_10003185
259 Ga0307411_10003771
260 Ga0307415_100062604
261 Ga0307510_10002773
262 Ga0395899_0020175
263 Ga0395900_0086413
264 Ga0395900_0524530
265 Ga0395898_0061143
266 Ga0395905_0016190
267 Ga0395901_0051056
268 Ga0395901_0093618
269 Ga0451791_0572982
270 Ga0451853_0927201
271 Ga0439448_0031076
272 Ga0439449_0000536
273 Ga0439457_001993
274 Ga0450903_000051
275 Ga0466972_0002726
276 Ga0466965_0081081
277 Ga0466966_0051558
278 Ga0466966_0121337
279 Ga0466966_0168858
280 Ga0466963_0058830
281 Ga0466963_0226829
282 Ga0466971_0020486
283 Ga0466971_0055281
284 Ga0466970_0125413
285 Ga0466957_0123400
286 Ga0466957_0177705
287 Ga0466960_0059612
288 Ga0466959_0072114
289 Ga0466959_0079145
290 Ga0466958_0142520
291 Ga0466958_0290553
292 Ga0466967_0138778
293 Ga0466967_0232113
294 Ga0496104_0221575
295 Ga0496106_0014309
296 Ga0496108_0109490
297 Ga0496108_0155735
298 Ga0496108_0264725
299 Ga0496109_0014421
300 Ga0496109_0047679
301 Ga0496109_0066022
302 Ga0496110_0077284
303 Ga0496110_0191054
304 Ga0496111_0067616
305 Ga0496113_0208750
306 Ga0496114_0162437
307 Ga0496114_0261588
308 Ga0501067_0034608
309 Ga0501035_0273418
310 nmdc:mga03n38_15759_c1
311 nmdc:mga0yw44_141396_c1
312 nmdc:mga06z11_6178_c1
313 nmdc:mga04h51_2342_c1
314 nmdc:mga0a205_433476_c1
315 2585304242
316 2585320718
317 2785339420
318 2786674670
319 2808917904
320 2837269965
321 2862283906
322 2863407780
323 2867430910
324 2947232264
325 2954008286
326 2954680732
327 2954683421
328 2954712844
329 2954722801
330 2954739027
331 2954741713
332 2954757885
333 2954760692
334 2990067782
335 3003008029
336 8002783249
337 8003317507
338 8048411319

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

50

167

0.94

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

205

322

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qe3-assembly1.cif.gz_A sheep liver sorbitol dehydrogenase 0.9063 2 334
4ilk-assembly1.cif.gz_A crystal structure of short chain alcohol dehydrogenase (rspb) from e. coli cft073 (efi target efi-506413) complexed with cofactor nadh 0.9024 1 334
4ilk-assembly1.cif.gz_B crystal structure of short chain alcohol dehydrogenase (rspb) from e. coli cft073 (efi target efi-506413) complexed with cofactor nadh 0.9012 1 334
4fwj-assembly3.cif.gz_B native structure of lsd2/aof1/kdm1b in spacegroup of i222 at 2.9a 0.9007 167 201
2dq4-assembly1.cif.gz_A crystal structure of threonine 3-dehydrogenase 0.8962 1 337
ID Description Score Start End Superfamily
af_P38105_1_147_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9541 1 150 3.90.180.10
af_P39400_4_147_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9433 1 149 3.90.180.10
af_A0A1D6EF22_2_176_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9288 168 201 3.50.50.60
af_P38105_1_147_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9229 1 150 3.90.180.10
af_Q2G2C7_146_286_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9217 151 278 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2N3FBP8-F1-model_v4 Alcohol dehydrogenase 0.9824 1 200 GO:0016491
AF-A0A2N3FBP8-F1-model_v4 Alcohol dehydrogenase 0.9776 1 200 GO:0016491
AF-A0A842ZL98-F1-model_v4 deleted 0.943 1 198
AF-A0A2T3C5F5-F1-model_v4 deleted 0.9379 1 169
AF-X1TK47-F1-model_v4 Enoyl reductase (ER) domain-containing protein 0.9375 1 216 GO:0008270
GO:0016491

Map