F255024
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 169 | 150 | 125 | 1028 |
Family's Representative Sequence
| Representative Sequence | 3300031727|Ga0316576_10003503|Ga0316576_100035034 |
| Length | 1064 |
| Sequence | MRTFIGSLEVSHRRADTPLWRRIGFAAFCRPPWQAAWVTTGDGSLLEGLYESLITRALEKRLAGITQLDISRGAIDEADEPDVLARHVRDVTLRALREERNAERRLELVNQLVEMLGAAEDSLSTARQLLAIAAPPAPGSHLRSLSERPSTPLSEAALLTNAAGEPGLGHEIRAELASSDRVDLIMAFVKWYGLRLLEDRLEALRERGVPLRIITTTYMGATDRAALDRLVRDFGAEVKIQFDSQRTRLHAKSWLFRRNTGFDTAYVGSSNLSRAAMLDGVEWNVRLSAISTPALLQKFRATFDSYWNDADRDRLDDALAEAAGKRPHDRVTLTLSGLEVRPYSYQQEMLDQLDVERLVHNRHRNLVVAATGTGKTVVAALDYRRLAAGSATLSRLLFVAHRREILQQSLRTYREVLSDASFGELYVDGHRPERWDHVFASVQSLSSYGITNIPPDAYDVVVVDEFHHAEARTYRRILDHLKPRELLGLTATPERGDGLDVRSFFEGRTAAELRLWDALKADLLTPFHYFAVADGMDMTRVDWKAGAYDAGELSNLFTGNDARARIVLKAVRDKVADLTAMKALAFCVSRDHARYMTRVFNEAGIRSATVLGDTAKPERDDAVRDLRDGAIQVLFAVDVFNEGVDVPAINTVLFLRPTESSTVFLQQLGRGLRRATDKAVLTALDFVGHHRKEFRFDQRFRAMTGSTRAALERDIQHGFPFLPAGTQIVLDRQSQELVLENIRSQVTTRWTGITAELRAHPTGDLATFLDESGVELADVVRADRSWSRLRRDAGLEVPQGGPFEKALLKRVRALCHIDDPDRAAAYLTWLADGAPDYDHADPALQAYGRMLFFSLWPDGGGFDSYAAGLSALRSESAVREDLRAAIEIGLDSAERVTSRLQGSLGLRPLKVHARYTREEIVAALDYVSIEGRKPNSFREGTFFSPAANADASLITLNKSEADYSPSTMYQDYAISPELFHWESQSVTTVASKTGQRYLNHRAIGTHVLLFARPHRLSAFGTGAPYLFLGEADYVEHRGERPIAITWHLRTPMPAADFAAASVVV |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2582581313 | Streptomyces mirabilis OV308 | Isolate | Rhizosphere |
| 2 | 2616644814 | Streptomyces mirabilis OK461 | Isolate | Rhizosphere |
| 3 | 2643221624 | Phycicoccus sp. Root101 | Isolate | Unclassified |
| 4 | 2643221647 | Streptomyces sp. Root369 | Isolate | Unclassified |
| 5 | 2643221681 | Aeromicrobium sp. Root472D3 | Isolate | Unclassified |
| 6 | 2643221696 | Nocardioides sp. Root140 | Isolate | Unclassified |
| 7 | 2643221714 | Streptomyces sp. Root264 | Isolate | Unclassified |
| 8 | 2791355406 | Streptomyces rhizosphaericus NRRL B-24304 | Isolate | Unclassified |
| 9 | 2802429296 | Streptomyces sampsonii KJ40 | Isolate | Rhizosphere |
| 10 | 2808606375 | Streptomyces sp. SLBN-31 | Isolate | Unclassified |
| 11 | 2811994917 | Streptomyces sp. SLBN-134 | Isolate | Unclassified |
| 12 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 13 | 2818991318 | Humibacillus xanthopallidus SLBN-155 | Isolate | Unclassified |
| 14 | 2818991469 | Terrabacter lapilli 3265 | Isolate | Rhizosphere |
| 15 | 2835188231 | Isoptericola variabilis JZ7 | Isolate | Unclassified |
| 16 | 2855386786 | Nocardioides ferulae EGI 63112 | Isolate | Unclassified |
| 17 | 2856741275 | Microbispora triticiradicis NEAU-HRDPA2-9 | Isolate | Unclassified |
| 18 | 2862507626 | Streptomyces sp. NWU339 | Isolate | Unclassified |
| 19 | 2862574272 | Streptomyces sp. AcE210 | Isolate | Nodule |
| 20 | 2867428634 | Streptomyces sp. RP5T | Isolate | Unclassified |
| 21 | 2875391855 | Streptomyces cavourensis 1AS2a | Isolate | Rhizosphere |
| 22 | 2877676314 | Streptomyces griseorubiginosus 3E-1 | Isolate | Unclassified |
| 23 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 24 | 2912715099 | Streptomyces sp. Z423-1 | Isolate | Rhizosphere |
| 25 | 2946064051 | Streptomyces luteogriseus W4I19-1 | Isolate | Rhizosphere |
| 26 | 2947224130 | Streptomyces afghaniensis W1I20 | Isolate | Rhizosphere |
| 27 | 2954673503 | Streptomyces sp. SAI-119 | Isolate | Rhizosphere |
| 28 | 2954682443 | Streptomyces sp. SAI-149 | Isolate | Rhizosphere |
| 29 | 2954701450 | Streptomyces sp. SAI-144 | Isolate | Rhizosphere |
| 30 | 2954711539 | Streptomyces sp. SAI-090 | Isolate | Rhizosphere |
| 31 | 2954721474 | Streptomyces sp. SAI-117 | Isolate | Rhizosphere |
| 32 | 2954731030 | Streptomyces sp. SAI-133 | Isolate | Rhizosphere |
| 33 | 2954740390 | Streptomyces sp. SAI-041 | Isolate | Rhizosphere |
| 34 | 2954749733 | Streptomyces sp. SAI-135 | Isolate | Rhizosphere |
| 35 | 2954759201 | Streptomyces sp. SAI-208 | Isolate | Rhizosphere |
| 36 | 2997600082 | Streptomyces coffeae CA1R205 | Isolate | Unclassified |
| 37 | 3001889506 | Janibacter sp. YIM B02568 | Isolate | Unclassified |
| 38 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 39 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 40 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 41 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 42 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 44 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 45 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 46 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 47 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 48 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 57 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 64 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 65 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 66 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 67 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 68 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 69 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 70 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 71 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 72 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 73 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 74 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 75 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 76 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 77 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 78 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 79 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 80 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 81 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 82 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 83 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 84 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 85 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 86 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 112 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 113 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 114 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 115 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 135 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 136 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 137 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 138 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 139 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 140 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 141 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 142 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 143 | 8023623736 | Streptomyces sp. 111WW2 | Isolate | Unclassified |
| 144 | 8025413630 | Streptomyces sp. CAI-17 | Isolate | Rhizosphere |
| 145 | 8047893842 | Streptomyces cangkringensis DSM 41769 | Isolate | Rhizosphere |
| 146 | 8048127548 | Streptomyces samsunensis DSM 42010 | Isolate | Rhizosphere |
| 147 | 8048356638 | Streptomyces rhizosphaericus DSM 41760 | Isolate | Rhizosphere |
| 148 | 8055172936 | Sphaerisporangium perillae NEAU-ZS1 | Isolate | Unclassified |
| 149 | 8056667051 | Streptomyces sichuanensis SCA3-4 | Isolate | Rhizosphere |
| 150 | 8056829672 | Streptomyces barringtoniae JA03 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 72.78 |
| Metatranscriptomes | 0.59 |
| Isolates | 26.63 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.55 |
| Nodule | 0.59 |
| Rhizoplane | 2.96 |
| Rhizosphere | 72.78 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 20.12 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootL2_10167381 | 3300003322 | Bacteria | 6192 |
| 2 | rootH1_10005576 | 3300003316 | Bacteria | 25870 |
| 3 | rootH1_10005576 | 3300003323 | Bacteria | 7101 |
| 4 | rootH1_10019030 | 3300003323 | Bacteria | 5705 |
| 5 | Ga0070683_100056556 | 3300005329 | Bacteria | 3643 |
| 6 | Ga0070680_100005242 | 3300005336 | Bacteria | 9810 |
| 7 | Ga0070660_100034271 | 3300005339 | Bacteria | 3834 |
| 8 | Ga0070701_10005728 | 3300005438 | Bacteria | 5164 |
| 9 | Ga0070700_100013047 | 3300005441 | Bacteria | 4659 |
| 10 | Ga0070684_100040035 | 3300005535 | Bacteria | 4033 |
| 11 | Ga0068852_100047873 | 3300005616 | Bacteria | 3651 |
| 12 | Ga0075431_100001754 | 3300006847 | Bacteria | 20403 |
| 13 | Ga0105245_10016250 | 3300009098 | Bacteria | 6488 |
| 14 | Ga0105245_10056848 | 3300009098 | Bacteria | 3517 |
| 15 | Ga0114129_10079260 | 3300009147 | Bacteria | 4567 |
| 16 | Ga0105243_10007629 | 3300009148 | Bacteria | 8316 |
| 17 | Ga0105238_10048377 | 3300009551 | Bacteria | 4286 |
| 18 | Ga0105249_10063210 | 3300009553 | Bacteria | 3400 |
| 19 | Ga0105246_10015745 | 3300011119 | Bacteria | 4780 |
| 20 | Ga0157372_10011164 | 3300013307 | Bacteria | 9553 |
| 21 | Ga0157380_10008724 | 3300014326 | Bacteria | 7244 |
| 22 | Ga0206354_11134450 | 3300020081 | Bacteria | 3917 |
| 23 | Ga0207660_10000935 | 3300025917 | Bacteria | 19308 |
| 24 | Ga0207657_10046635 | 3300025919 | Bacteria | 3795 |
| 25 | Ga0207652_10001970 | 3300025921 | Bacteria | 17756 |
| 26 | Ga0207690_10028987 | 3300025932 | Bacteria | 3514 |
| 27 | Ga0207708_10000308 | 3300026075 | Bacteria | 38619 |
| 28 | Ga0207648_10022359 | 3300026089 | Bacteria | 5681 |
| 29 | Ga0265334_10003705 | 3300028573 | Bacteria | 6918 |
| 30 | Ga0307511_10008345 | 3300030521 | Bacteria | 10368 |
| 31 | Ga0307512_10002973 | 3300030522 | Bacteria | 20444 |
| 32 | Ga0307512_10008673 | 3300030522 | Bacteria | 9880 |
| 33 | Ga0307509_10009726 | 3300031507 | Bacteria | 11938 |
| 34 | Ga0307508_10013205 | 3300031616 | Bacteria | 7556 |
| 35 | Ga0307508_10013455 | 3300031616 | Bacteria | 7482 |
| 36 | Ga0307508_10018522 | 3300031616 | Bacteria | 6329 |
| 37 | Ga0307514_10004282 | 3300031649 | Bacteria | 13181 |
| 38 | Ga0307514_10021361 | 3300031649 | Bacteria | 5276 |
| 39 | Ga0316576_10003503 | 3300031727 | Bacteria | 9221 |
| 40 | Ga0316576_10019426 | 3300031727 | Bacteria | 4656 |
| 41 | Ga0307416_100009093 | 3300032002 | Bacteria | 6473 |
| 42 | Ga0307507_10011359 | 3300033179 | Bacteria | 11248 |
| 43 | Ga0307510_10005115 | 3300033180 | Bacteria | 15582 |
| 44 | Ga0316574_0001282 | 3300035398 | Bacteria | 11735 |
| 45 | Ga0316582_0009951 | 3300036647 | Bacteria | 5185 |
| 46 | Ga0395898_0006867 | 3300037466 | Bacteria | 12108 |
| 47 | Ga0395898_0010956 | 3300037466 | Bacteria | 9455 |
| 48 | Ga0395898_0039751 | 3300037466 | Bacteria | 4654 |
| 49 | Ga0395901_0029022 | 3300038443 | Bacteria | 5691 |
| 50 | Ga0395901_0044649 | 3300038443 | Bacteria | 4596 |
| 51 | Ga0466972_0002011 | 3300044658 | Bacteria | 9961 |
| 52 | Ga0466966_0009581 | 3300044684 | Bacteria | 6410 |
| 53 | Ga0466961_0004061 | 3300044693 | Bacteria | 9164 |
| 54 | Ga0466963_0002579 | 3300044694 | Bacteria | 10168 |
| 55 | Ga0466971_0000592 | 3300044719 | Bacteria | 14355 |
| 56 | Ga0466957_0003537 | 3300044842 | Bacteria | 8600 |
| 57 | Ga0466959_0007118 | 3300045049 | Bacteria | 7826 |
| 58 | Ga0466958_0001885 | 3300045836 | Bacteria | 10244 |
| 59 | Ga0466967_0030285 | 3300045976 | Bacteria | 4540 |
| 60 | Ga0495592_0028626 | 3300046454 | Bacteria | 4218 |
| 61 | Ga0495629_0013448 | 3300046459 | Bacteria | 5902 |
| 62 | Ga0495629_0034856 | 3300046459 | Bacteria | 3558 |
| 63 | Ga0495651_0017864 | 3300046462 | Bacteria | 5491 |
| 64 | Ga0495580_0016828 | 3300046472 | Bacteria | 5486 |
| 65 | Ga0495662_0003696 | 3300046476 | Bacteria | 7714 |
| 66 | Ga0495608_0006766 | 3300046511 | Bacteria | 8129 |
| 67 | Ga0495666_0010663 | 3300046526 | Bacteria | 4582 |
| 68 | Ga0495665_0009165 | 3300046531 | Bacteria | 5364 |
| 69 | Ga0495640_0009627 | 3300046533 | Bacteria | 7515 |
| 70 | Ga0495640_0009948 | 3300046533 | Bacteria | 7372 |
| 71 | Ga0495622_0004357 | 3300046557 | Bacteria | 6589 |
| 72 | Ga0495667_0021794 | 3300046559 | Bacteria | 4321 |
| 73 | Ga0495668_0005711 | 3300046616 | Bacteria | 8327 |
| 74 | Ga0495634_0005419 | 3300046642 | Bacteria | 9822 |
| 75 | Ga0495634_0010944 | 3300046642 | Bacteria | 6620 |
| 76 | Ga0495625_0006885 | 3300046660 | Bacteria | 10035 |
| 77 | Ga0495635_0013593 | 3300046663 | Bacteria | 5696 |
| 78 | Ga0495588_0004208 | 3300046674 | Bacteria | 6346 |
| 79 | Ga0495657_0005429 | 3300046675 | Bacteria | 10092 |
| 80 | Ga0495646_0009633 | 3300046680 | Bacteria | 6132 |
| 81 | Ga0495669_0005173 | 3300046684 | Bacteria | 5427 |
| 82 | Ga0495613_0004809 | 3300046689 | Bacteria | 10134 |
| 83 | Ga0495613_0004951 | 3300046689 | Bacteria | 10000 |
| 84 | Ga0495613_0011783 | 3300046689 | Bacteria | 6496 |
| 85 | Ga0495600_0006970 | 3300046809 | Bacteria | 6895 |
| 86 | Ga0495604_0000683 | 3300047317 | Bacteria | 28713 |
| 87 | Ga0495676_0005213 | 3300047321 | Bacteria | 11892 |
| 88 | Ga0495676_0038114 | 3300047321 | Bacteria | 3995 |
| 89 | Ga0495676_0042699 | 3300047321 | Bacteria | 3719 |
| 90 | Ga0495593_0010091 | 3300047673 | Bacteria | 5467 |
| 91 | Ga0495614_0006889 | 3300048089 | Bacteria | 5084 |
| 92 | Ga0496106_0030593 | 3300048909 | Bacteria | 4013 |
| 93 | Ga0496108_0038265 | 3300048911 | Bacteria | 3996 |
| 94 | Ga0496109_0035493 | 3300048912 | Bacteria | 4499 |
| 95 | Ga0496110_0012279 | 3300048913 | Bacteria | 7040 |
| 96 | Ga0496110_0051155 | 3300048913 | Bacteria | 3630 |
| 97 | Ga0501031_0000023 | 3300049568 | Bacteria | 90377 |
| 98 | Ga0501032_0000169 | 3300049569 | Bacteria | 53317 |
| 99 | Ga0501033_0002335 | 3300049570 | Bacteria | 16169 |
| 100 | Ga0501034_0000927 | 3300049571 | Bacteria | 42807 |
| 101 | Ga0501036_0000871 | 3300049572 | Bacteria | 22496 |
| 102 | Ga0501037_0000676 | 3300049573 | Bacteria | 26109 |
| 103 | Ga0501038_0000115 | 3300049574 | Bacteria | 67817 |
| 104 | Ga0501039_0007987 | 3300049575 | Bacteria | 8063 |
| 105 | Ga0501043_0000384 | 3300049579 | Bacteria | 39923 |
| 106 | Ga0501046_0000140 | 3300049580 | Bacteria | 76647 |
| 107 | Ga0501048_0000258 | 3300049582 | Bacteria | 35358 |
| 108 | Ga0501067_0020561 | 3300049583 | Bacteria | 3653 |
| 109 | Ga0501069_0003093 | 3300049585 | Bacteria | 8526 |
| 110 | Ga0501070_0002488 | 3300049586 | Bacteria | 16148 |
| 111 | Ga0501073_0003356 | 3300049589 | Bacteria | 12035 |
| 112 | Ga0501074_0005593 | 3300049590 | Bacteria | 9042 |
| 113 | Ga0501080_0000389 | 3300049742 | Bacteria | 33857 |
| 114 | Ga0501035_0000295 | 3300049822 | Bacteria | 59155 |
| 115 | Ga0501044_0001286 | 3300049823 | Bacteria | 29640 |
| 116 | Ga0501044_0051602 | 3300049823 | Bacteria | 4240 |
| 117 | nmdc:mga07m45_8038_c1 | 3300050496 | Bacteria | 5408 |
| 118 | nmdc:mga05p37_45973_c1 | 3300050507 | Bacteria | 5369 |
| 119 | Ga0500578_0009619 | 3300053086 | Bacteria | 6274 |
| 120 | Ga0500644_0000003 | 3300053088 | Bacteria | 199121 |
| 121 | Ga0500556_0000481 | 3300053104 | Bacteria | 27853 |
| 122 | Ga0500652_011431 | 3300053131 | Bacteria | 3075 |
| 123 | Ga0500616_0012571 | 3300053153 | Bacteria | 4951 |
| 124 | Ga0501084_0008416 | 3300054114 | Bacteria | 8523 |
| 125 | Ga0466962_0004285 | 3300061719 | Bacteria | 6834 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300053088 | Ga0500644_0000003 | Ga0500644_0000003_183330_185879 | 847 |
| 2 | 3300009098 | Ga0105245_10056848 | Ga0105245_100568482 | 853 |
| 3 | 3300009553 | Ga0105249_10063210 | Ga0105249_100632102 | 877 |
| 4 | 3300026075 | Ga0207708_10000308 | Ga0207708_1000030825 | 877 |
| 5 | 3300003323 | rootH1_10005576 | rootH1_100055765 | 889 |
| 6 | iso_pu_bacteria | 2643221624 | 2644134381 | 900 |
| 7 | 3300053131 | Ga0500652_011431 | Ga0500652_011431_256_3057 | 915 |
| 8 | 3300048089 | Ga0495614_0006889 | Ga0495614_0006889_2156_5035 | 959 |
| 9 | 3300009147 | Ga0114129_10079260 | Ga0114129_100792602 | 974 |
| 10 | 3300050507 | nmdc:mga05p37_45973_c1 | nmdc:mga05p37_45973_c1_386_3484 | 974 |
| 11 | 3300011119 | Ga0105246_10015745 | Ga0105246_100157451 | 992 |
| 12 | iso_pu_bacteria | 8056667051 | 8056667765 | 992 |
| 13 | 3300009098 | Ga0105245_10016250 | Ga0105245_100162505 | 995 |
| 14 | 3300009148 | Ga0105243_10007629 | Ga0105243_100076295 | 995 |
| 15 | 3300009551 | Ga0105238_10048377 | Ga0105238_100483772 | 995 |
| 16 | 3300013307 | Ga0157372_10011164 | Ga0157372_100111642 | 995 |
| 17 | 3300014326 | Ga0157380_10008724 | Ga0157380_100087242 | 995 |
| 18 | 3300048912 | Ga0496109_0035493 | Ga0496109_0035493_793_3825 | 995 |
| 19 | 3300048911 | Ga0496108_0038265 | Ga0496108_0038265_209_3313 | 1001 |
| 20 | 3300048913 | Ga0496110_0012279 | Ga0496110_0012279_197_3301 | 1001 |
| 21 | 3300026089 | Ga0207648_10022359 | Ga0207648_100223593 | 1005 |
| 22 | 3300028573 | Ga0265334_10003705 | Ga0265334_100037056 | 1006 |
| 23 | 3300005329 | Ga0070683_100056556 | Ga0070683_1000565561 | 1008 |
| 24 | 3300005438 | Ga0070701_10005728 | Ga0070701_100057282 | 1008 |
| 25 | 3300005441 | Ga0070700_100013047 | Ga0070700_1000130473 | 1008 |
| 26 | 3300005535 | Ga0070684_100040035 | Ga0070684_1000400352 | 1008 |
| 27 | 3300005616 | Ga0068852_100047873 | Ga0068852_1000478732 | 1008 |
| 28 | 3300005339 | Ga0070660_100034271 | Ga0070660_1000342712 | 1010 |
| 29 | 3300025919 | Ga0207657_10046635 | Ga0207657_100466353 | 1010 |
| 30 | 3300025932 | Ga0207690_10028987 | Ga0207690_100289871 | 1010 |
| 31 | 3300053086 | Ga0500578_0009619 | Ga0500578_0009619_2523_5609 | 1010 |
| 32 | 3300053153 | Ga0500616_0012571 | Ga0500616_0012571_575_3661 | 1010 |
| 33 | 3300031727 | Ga0316576_10019426 | Ga0316576_100194263 | 1011 |
| 34 | 3300036647 | Ga0316582_0009951 | Ga0316582_0009951_1748_4834 | 1011 |
| 35 | 3300048909 | Ga0496106_0030593 | Ga0496106_0030593_534_3614 | 1011 |
| 36 | 3300048913 | Ga0496110_0051155 | Ga0496110_0051155_303_3383 | 1011 |
| 37 | 3300049583 | Ga0501067_0020561 | Ga0501067_0020561_376_3456 | 1011 |
| 38 | 3300005336 | Ga0070680_100005242 | Ga0070680_1000052426 | 1012 |
| 39 | 3300020081 | Ga0206354_11134450 | Ga0206354_111344501 | 1012 |
| 40 | 3300025917 | Ga0207660_10000935 | Ga0207660_1000093518 | 1012 |
| 41 | 3300025921 | Ga0207652_10001970 | Ga0207652_1000197018 | 1012 |
| 42 | iso_pu_bacteria | 2816332139 | 2816508058 | 1014 |
| 43 | 3300050496 | nmdc:mga07m45_8038_c1 | nmdc:mga07m45_8038_c1_2016_5081 | 1016 |
| 44 | iso_pu_bacteria | 2643221681 | 2644456765 | 1017 |
| 45 | iso_pu_bacteria | 2643221696 | 2644533613 | 1018 |
| 46 | 3300035398 | Ga0316574_0001282 | Ga0316574_0001282_3076_6186 | 1020 |
| 47 | iso_pu_bacteria | 2887478801 | 2887483447 | 1020 |
| 48 | 3300006847 | Ga0075431_100001754 | Ga0075431_10000175410 | 1021 |
| 49 | 3300053104 | Ga0500556_0000481 | Ga0500556_0000481_14465_17548 | 1021 |
| 50 | iso_pu_bacteria | 2855386786 | 2855388386 | 1021 |
| 51 | iso_pu_bacteria | 2856741275 | 2856745909 | 1021 |
| 52 | iso_pu_bacteria | 8055172936 | 8055175535 | 1021 |
| 53 | 3300032002 | Ga0307416_100009093 | Ga0307416_1000090932 | 1022 |
| 54 | 3300038443 | Ga0395901_0029022 | Ga0395901_0029022_1013_4102 | 1022 |
| 55 | 3300046684 | Ga0495669_0005173 | Ga0495669_0005173_1157_4252 | 1022 |
| 56 | 3300049568 | Ga0501031_0000023 | Ga0501031_0000023_63324_66413 | 1022 |
| 57 | 3300049569 | Ga0501032_0000169 | Ga0501032_0000169_49621_52710 | 1022 |
| 58 | 3300049570 | Ga0501033_0002335 | Ga0501033_0002335_43_3132 | 1022 |
| 59 | 3300049571 | Ga0501034_0000927 | Ga0501034_0000927_350_3439 | 1022 |
| 60 | 3300049572 | Ga0501036_0000871 | Ga0501036_0000871_350_3439 | 1022 |
| 61 | 3300049573 | Ga0501037_0000676 | Ga0501037_0000676_478_3567 | 1022 |
| 62 | 3300049574 | Ga0501038_0000115 | Ga0501038_0000115_10513_13602 | 1022 |
| 63 | 3300049575 | Ga0501039_0007987 | Ga0501039_0007987_3989_7078 | 1022 |
| 64 | 3300049579 | Ga0501043_0000384 | Ga0501043_0000384_10513_13602 | 1022 |
| 65 | 3300049580 | Ga0501046_0000140 | Ga0501046_0000140_1675_4764 | 1022 |
| 66 | 3300049582 | Ga0501048_0000258 | Ga0501048_0000258_3878_6967 | 1022 |
| 67 | 3300049585 | Ga0501069_0003093 | Ga0501069_0003093_5051_8140 | 1022 |
| 68 | 3300049586 | Ga0501070_0002488 | Ga0501070_0002488_8741_11830 | 1022 |
| 69 | 3300049589 | Ga0501073_0003356 | Ga0501073_0003356_5084_8173 | 1022 |
| 70 | 3300049590 | Ga0501074_0005593 | Ga0501074_0005593_4230_7319 | 1022 |
| 71 | 3300049742 | Ga0501080_0000389 | Ga0501080_0000389_5172_8261 | 1022 |
| 72 | 3300049822 | Ga0501035_0000295 | Ga0501035_0000295_52393_55482 | 1022 |
| 73 | 3300049823 | Ga0501044_0001286 | Ga0501044_0001286_25566_28655 | 1022 |
| 74 | 3300054114 | Ga0501084_0008416 | Ga0501084_0008416_1097_4186 | 1022 |
| 75 | iso_pu_bacteria | 3001889506 | 3001890031 | 1022 |
| 76 | 3300031727 | Ga0316576_10003503 | Ga0316576_100035034 | 1023 |
| 77 | 3300037466 | Ga0395898_0039751 | Ga0395898_0039751_1059_4217 | 1023 |
| 78 | 3300038443 | Ga0395901_0044649 | Ga0395901_0044649_536_3694 | 1023 |
| 79 | 3300037466 | Ga0395898_0010956 | Ga0395898_0010956_5940_9035 | 1025 |
| 80 | iso_pu_bacteria | 2818991318 | 2819428634 | 1026 |
| 81 | iso_pu_bacteria | 2818991469 | 2819729970 | 1027 |
| 82 | iso_pu_bacteria | 2835188231 | 2835190968 | 1029 |
| 83 | 3300003323 | rootH1_10019030 | rootH1_100190305 | 1032 |
| 84 | 3300044658 | Ga0466972_0002011 | Ga0466972_0002011_3515_6664 | 1032 |
| 85 | 3300046533 | Ga0495640_0009627 | Ga0495640_0009627_1223_4375 | 1034 |
| 86 | iso_pu_bacteria | 2582581313 | 2585309908 | 1036 |
| 87 | iso_pu_bacteria | 2643221647 | 2644264587 | 1036 |
| 88 | iso_pu_bacteria | 2877676314 | 2877681626 | 1036 |
| 89 | iso_pu_bacteria | 2954673503 | 2954676421 | 1036 |
| 90 | iso_pu_bacteria | 2954682443 | 2954687747 | 1036 |
| 91 | iso_pu_bacteria | 2954711539 | 2954716725 | 1036 |
| 92 | iso_pu_bacteria | 2954721474 | 2954726672 | 1036 |
| 93 | iso_pu_bacteria | 2954731030 | 2954735123 | 1036 |
| 94 | iso_pu_bacteria | 2954740390 | 2954745594 | 1036 |
| 95 | iso_pu_bacteria | 2954749733 | 2954753994 | 1036 |
| 96 | iso_pu_bacteria | 2954759201 | 2954764569 | 1036 |
| 97 | 3300047321 | Ga0495676_0038114 | Ga0495676_0038114_603_3719 | 1038 |
| 98 | iso_pu_bacteria | 2643221714 | 2644625518 | 1038 |
| 99 | iso_pu_bacteria | 2808606375 | 2808920109 | 1039 |
| 100 | iso_pu_bacteria | 2867428634 | 2867434111 | 1039 |
| 101 | iso_pu_bacteria | 2947224130 | 2947230056 | 1039 |
| 102 | iso_pu_bacteria | 2954701450 | 2954704637 | 1039 |
| 103 | 3300030521 | Ga0307511_10008345 | Ga0307511_1000834510 | 1040 |
| 104 | 3300031507 | Ga0307509_10009726 | Ga0307509_100097264 | 1040 |
| 105 | 3300033180 | Ga0307510_10005115 | Ga0307510_100051154 | 1040 |
| 106 | 3300037466 | Ga0395898_0006867 | Ga0395898_0006867_4550_7687 | 1040 |
| 107 | 3300046459 | Ga0495629_0034856 | Ga0495629_0034856_350_3496 | 1040 |
| 108 | 3300046557 | Ga0495622_0004357 | Ga0495622_0004357_1474_4596 | 1040 |
| 109 | 3300046616 | Ga0495668_0005711 | Ga0495668_0005711_2759_5881 | 1040 |
| 110 | 3300046675 | Ga0495657_0005429 | Ga0495657_0005429_6081_9203 | 1040 |
| 111 | 3300046689 | Ga0495613_0004951 | Ga0495613_0004951_6096_9218 | 1040 |
| 112 | 3300046689 | Ga0495613_0011783 | Ga0495613_0011783_948_4070 | 1040 |
| 113 | iso_pu_bacteria | 8056829672 | 8056830332 | 1040 |
| 114 | 3300030522 | Ga0307512_10002973 | Ga0307512_1000297318 | 1041 |
| 115 | 3300030522 | Ga0307512_10008673 | Ga0307512_100086733 | 1041 |
| 116 | 3300031616 | Ga0307508_10013205 | Ga0307508_100132055 | 1041 |
| 117 | 3300031616 | Ga0307508_10018522 | Ga0307508_100185223 | 1041 |
| 118 | 3300031649 | Ga0307514_10004282 | Ga0307514_100042827 | 1041 |
| 119 | 3300031649 | Ga0307514_10021361 | Ga0307514_100213612 | 1041 |
| 120 | 3300049823 | Ga0501044_0051602 | Ga0501044_0051602_845_3991 | 1041 |
| 121 | iso_pu_bacteria | 2791355406 | 2793979518 | 1041 |
| 122 | iso_pu_bacteria | 2875391855 | 2875394047 | 1041 |
| 123 | iso_pu_bacteria | 2997600082 | 2997604367 | 1041 |
| 124 | iso_pu_bacteria | 8047893842 | 8047897264 | 1041 |
| 125 | iso_pu_bacteria | 8048127548 | 8048135906 | 1041 |
| 126 | iso_pu_bacteria | 8048356638 | 8048361680 | 1041 |
| 127 | 3300047321 | Ga0495676_0005213 | Ga0495676_0005213_577_3705 | 1042 |
| 128 | iso_pu_bacteria | 8023623736 | 8023631113 | 1042 |
| 129 | 3300046454 | Ga0495592_0028626 | Ga0495592_0028626_726_3881 | 1043 |
| 130 | 3300046472 | Ga0495580_0016828 | Ga0495580_0016828_820_3975 | 1043 |
| 131 | 3300046476 | Ga0495662_0003696 | Ga0495662_0003696_1739_4894 | 1043 |
| 132 | 3300046511 | Ga0495608_0006766 | Ga0495608_0006766_320_3475 | 1043 |
| 133 | 3300046526 | Ga0495666_0010663 | Ga0495666_0010663_785_3940 | 1043 |
| 134 | 3300046531 | Ga0495665_0009165 | Ga0495665_0009165_651_3806 | 1043 |
| 135 | 3300046533 | Ga0495640_0009948 | Ga0495640_0009948_1100_4255 | 1043 |
| 136 | 3300046559 | Ga0495667_0021794 | Ga0495667_0021794_321_3476 | 1043 |
| 137 | 3300046642 | Ga0495634_0010944 | Ga0495634_0010944_2916_6071 | 1043 |
| 138 | 3300046689 | Ga0495613_0004809 | Ga0495613_0004809_1868_5023 | 1043 |
| 139 | iso_pu_bacteria | 2802429296 | 2804847580 | 1043 |
| 140 | iso_pu_bacteria | 2862507626 | 2862508890 | 1043 |
| 141 | 3300044684 | Ga0466966_0009581 | Ga0466966_0009581_2943_6107 | 1044 |
| 142 | 3300044693 | Ga0466961_0004061 | Ga0466961_0004061_2461_5625 | 1044 |
| 143 | 3300044694 | Ga0466963_0002579 | Ga0466963_0002579_1648_4812 | 1044 |
| 144 | 3300044719 | Ga0466971_0000592 | Ga0466971_0000592_10512_13676 | 1044 |
| 145 | 3300044842 | Ga0466957_0003537 | Ga0466957_0003537_5400_8564 | 1044 |
| 146 | 3300045049 | Ga0466959_0007118 | Ga0466959_0007118_1874_5038 | 1044 |
| 147 | 3300045836 | Ga0466958_0001885 | Ga0466958_0001885_4799_7963 | 1044 |
| 148 | 3300045976 | Ga0466967_0030285 | Ga0466967_0030285_206_3370 | 1044 |
| 149 | 3300061719 | Ga0466962_0004285 | Ga0466962_0004285_3172_6336 | 1044 |
| 150 | 3300031616 | Ga0307508_10013455 | Ga0307508_100134554 | 1045 |
| 151 | iso_pu_bacteria | 8025413630 | 8025417362 | 1045 |
| 152 | 3300047321 | Ga0495676_0042699 | Ga0495676_0042699_265_3405 | 1046 |
| 153 | iso_pu_bacteria | 2811994917 | 2812481007 | 1046 |
| 154 | iso_pu_bacteria | 2862574272 | 2862579729 | 1048 |
| 155 | iso_pu_bacteria | 2616644814 | 2616697525 | 1049 |
| 156 | iso_pu_bacteria | 2912715099 | 2912720577 | 1049 |
| 157 | iso_pu_bacteria | 2946064051 | 2946067186 | 1049 |
| 158 | 3300003322 | rootL2_10167381 | rootL2_101673812 | 1054 |
| 159 | 3300033179 | Ga0307507_10011359 | Ga0307507_100113591 | 1054 |
| 160 | 3300046459 | Ga0495629_0013448 | Ga0495629_0013448_2473_5637 | 1054 |
| 161 | 3300046462 | Ga0495651_0017864 | Ga0495651_0017864_382_3546 | 1054 |
| 162 | 3300046642 | Ga0495634_0005419 | Ga0495634_0005419_4659_7823 | 1054 |
| 163 | 3300046660 | Ga0495625_0006885 | Ga0495625_0006885_4996_8160 | 1054 |
| 164 | 3300046663 | Ga0495635_0013593 | Ga0495635_0013593_2307_5471 | 1054 |
| 165 | 3300046674 | Ga0495588_0004208 | Ga0495588_0004208_311_3475 | 1054 |
| 166 | 3300046680 | Ga0495646_0009633 | Ga0495646_0009633_1074_4238 | 1054 |
| 167 | 3300046809 | Ga0495600_0006970 | Ga0495600_0006970_2487_5651 | 1054 |
| 168 | 3300047317 | Ga0495604_0000683 | Ga0495604_0000683_8395_11559 | 1054 |
| 169 | 3300047673 | Ga0495593_0010091 | Ga0495593_0010091_2189_5353 | 1054 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2p6n-assembly1.cif.gz_A | human dead-box rna helicase ddx41, helicase domain | 0.8253 | 506 | 671 |
| 2p6n-assembly2.cif.gz_B | human dead-box rna helicase ddx41, helicase domain | 0.8108 | 511 | 671 |
| 2yjt-assembly1.cif.gz_D | crystal structure of e. coli dead-box protein srmb bound to regulator of ribonuclease activity a (rraa) | 0.8053 | 507 | 670 |
| 2fz4-assembly1.cif.gz_A | crystal structure of the n-terminal half of archaeoglobus fulgidus xpb | 0.8016 | 322 | 475 |
| 7xwy-assembly1.cif.gz_A | crystal structure of spfft3 n-terminal truncation | 0.7891 | 321 | 476 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q06683_213_391_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9238 | 499 | 670 | 3.40.50.300 |
| af_A0A0P0VQJ4_229_320_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9097 | 546 | 618 | 3.40.50.300 |
| af_Q06683_213_391_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8799 | 499 | 670 | 3.40.50.300 |
| af_Q59PU6_225_432_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8745 | 513 | 668 | 3.40.50.300 |
| af_Q2FVC3_203_388_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8678 | 295 | 491 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A839YNK9-F1-model_v4 | deleted | 0.9255 | 563 | 667 |
|
| AF-A0A7J7QR12-F1-model_v4 | P-loop containing nucleoside triphosphate hydrolase protein | 0.9249 | 559 | 669 |
GO:0003677
GO:0005524 GO:0005829 GO:0016787 |
| AF-T1ASZ6-F1-model_v4 | Helicase | 0.9211 | 549 | 667 |
GO:0004386
GO:0005829 |
| AF-A0A7C7Y131-F1-model_v4 | DUF3427 domain-containing protein | 0.8956 | 14 | 274 |
|
| AF-A0A7C7Y131-F1-model_v4 | DUF3427 domain-containing protein | 0.8702 | 14 | 274 |
|
Predicted Structure (AlphaFold2)
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