F254514

General Info

Members Datasets Scaffolds Average Seq Length
169 129 338 200

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100040144|Ga0075428_1000401449
Length 236
Sequence MTNSKPEAQNRKQAQTSNDPILQTCFTKPVLSFGHSNLFRVSTFGFWILVCYILFAPASAFAHIQNGAAAGFLTGFVHPISGLDHVLAMVAVGLWGAQLGAPAIWVLPVAFPLVMAMGGMLGLIGVPVPGIEYGIAASAILLGAAVLFEVGASLVVTALLVGIFAIFHGHAHGTELPPGQNALLYSMGFVIATGCLHALGIGIGAVHRWTWGQKLLRAAGAVVAVGGVFFMWKALA

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300000041 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
9 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
33 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
34 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
35 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
36 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
58 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
59 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
60 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
61 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
62 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
63 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
64 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
65 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
66 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
69 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
70 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
71 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
78 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
79 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
80 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
81 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
85 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
86 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
87 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
88 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
89 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
90 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
91 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
92 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
93 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
94 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
97 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
98 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
99 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
100 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
101 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
112 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
113 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
114 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
117 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
120 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
121 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
124 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
125 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
126 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
127 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
128 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
129 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.59
Nodule 0
Rhizoplane 0.59
Rhizosphere 98.22
Stem 0
Stem Tuber 0
Unclassified 13.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100040144 3300006844 Bacteria 5150
2 ARcpr5oldR_c008228 3300000041 Bacteria 884
3 Ga0065707_10084573 3300005295 Bacteria 7047
4 Ga0070709_10128115 3300005434 Bacteria 1729
5 Ga0070713_100416394 3300005436 Bacteria 1257
6 Ga0068867_100420573 3300005459 Bacteria 1132
7 Ga0070706_100200698 3300005467 Bacteria 1863
8 Ga0070706_100382439 3300005467 Unclassified 1311
9 Ga0070697_100199738 3300005536 Bacteria 1699
10 Ga0070672_100270195 3300005543 Bacteria 1435
11 Ga0070665_100000119 3300005548 Bacteria 148727
12 Ga0070704_100124224 3300005549 Bacteria 1988
13 Ga0068861_100077853 3300005719 Bacteria 2588
14 Ga0068863_101269945 3300005841 Bacteria 743
15 Ga0068860_100334669 3300005843 Bacteria 1487
16 Ga0081455_10100441 3300005937 Bacteria 2325
17 Ga0070717_10886479 3300006028 Bacteria 812
18 Ga0097621_100437263 3300006237 Unclassified 1177
19 Ga0068871_100004297 3300006358 Bacteria 9892
20 Ga0075428_100468615 3300006844 Unclassified 1348
21 Ga0075428_101068351 3300006844 Bacteria 853
22 Ga0075431_100097526 3300006847 Unclassified 3035
23 Ga0075431_100266299 3300006847 Bacteria 1738
24 Ga0075433_10925867 3300006852 Unclassified 760
25 Ga0075434_100080891 3300006871 Unclassified 3246
26 Ga0075435_100071467 3300007076 Bacteria 2834
27 Ga0075435_100141440 3300007076 Bacteria 2019
28 Ga0105240_10000136 3300009093 Bacteria 150544
29 Ga0105240_10177872 3300009093 Bacteria 2514
30 Ga0114129_10457971 3300009147 Bacteria 1672
31 Ga0114129_10678604 3300009147 Bacteria 1327
32 Ga0105237_10187631 3300009545 Bacteria 2067
33 Ga0105238_10010716 3300009551 Bacteria 9206
34 Ga0105249_10412960 3300009553 Bacteria 1382
35 Ga0105239_10299905 3300010375 Bacteria 1810
36 Ga0157370_10187252 3300013104 Bacteria 1921
37 Ga0157378_10035541 3300013297 Bacteria 4408
38 Ga0163162_10382331 3300013306 Bacteria 1541
39 Ga0157380_10795501 3300014326 Bacteria 962
40 Ga0157376_10026836 3300014969 Unclassified 4557
41 Ga0157376_10135556 3300014969 Bacteria 2203
42 Ga0157376_10670923 3300014969 Bacteria 1039
43 Ga0213871_10014406 3300021441 Bacteria 1875
44 Ga0224572_1013011 3300024225 Bacteria 1586
45 Ga0207692_10072782 3300025898 Unclassified 1816
46 Ga0207642_10119589 3300025899 Bacteria 1356
47 Ga0207699_10130261 3300025906 Bacteria 1640
48 Ga0207705_10373838 3300025909 Bacteria 1100
49 Ga0207684_10265619 3300025910 Bacteria 1481
50 Ga0207684_10313512 3300025910 Bacteria 1352
51 Ga0207695_10000226 3300025913 Bacteria 150570
52 Ga0207657_10008528 3300025919 Bacteria 10393
53 Ga0207649_10000331 3300025920 Bacteria 35839
54 Ga0207681_10186611 3300025923 Bacteria 1583
55 Ga0207694_10064067 3300025924 Bacteria 2864
56 Ga0207650_10651791 3300025925 Bacteria 888
57 Ga0207691_10616598 3300025940 Bacteria 918
58 Ga0207712_10502142 3300025961 Bacteria 1037
59 Ga0207668_10166074 3300025972 Bacteria 1726
60 Ga0207702_10737479 3300026078 Bacteria 972
61 Ga0207641_10137945 3300026088 Bacteria 2197
62 Ga0207641_10504078 3300026088 Bacteria 1176
63 Ga0207648_10090892 3300026089 Bacteria 2668
64 Ga0207675_100108748 3300026118 Bacteria 2615
65 Ga0268266_10000003 3300028379 Bacteria 1701703
66 Ga0268265_10159211 3300028380 Bacteria 1915
67 Ga0268264_10234310 3300028381 Bacteria 1697
68 Ga0265325_10155358 3300031241 Unclassified 1079
69 Ga0316579_10025075 3300031691 Bacteria 2689
70 Ga0265314_10023279 3300031711 Unclassified 4726
71 Ga0373934_0115177 3300035086 Bacteria 1092
72 Ga0373954_0012445 3300035118 Bacteria 3782
73 Ga0373954_0172240 3300035118 Bacteria 1060
74 Ga0373956_0028329 3300035119 Bacteria 2437
75 Ga0373956_0170820 3300035119 Bacteria 1026
76 Ga0373955_0003831 3300035172 Bacteria 6630
77 Ga0373955_0118707 3300035172 Bacteria 1536
78 Ga0316574_0013229 3300035398 Bacteria 4738
79 Ga0373924_0155423 3300035410 Unclassified 1002
80 Ga0373933_0000285 3300035724 Bacteria 32663
81 Ga0373937_0000820 3300036401 Bacteria 26602
82 Ga0373937_0270464 3300036401 Bacteria 1604
83 Ga0373937_0401325 3300036401 Unclassified 1301
84 Ga0373925_0151389 3300037068 Bacteria 1822
85 Ga0436360_0058853 3300039438 Bacteria 3153
86 Ga0436361_0074756 3300039447 Bacteria 931
87 Ga0436363_0029442 3300039450 Bacteria 2520
88 Ga0451577_0000336 3300042876 Bacteria 87609
89 Ga0451577_0307843 3300042876 Bacteria 1436
90 Ga0451577_1156263 3300042876 Unclassified 691
91 Ga0453684_0000052 3300044712 Bacteria 546732
92 Ga0453684_0037674 3300044712 Bacteria 6634
93 Ga0451576_0507057 3300045051 Bacteria 1267
94 Ga0451576_0660090 3300045051 Bacteria 1099
95 Ga0451576_0664515 3300045051 Bacteria 1095
96 Ga0495592_0029172 3300046454 Bacteria 4177
97 Ga0495592_0309512 3300046454 Bacteria 1024
98 Ga0495629_0238661 3300046459 Unclassified 1252
99 Ga0495651_0080404 3300046462 Bacteria 2462
100 Ga0495653_0163224 3300046463 Bacteria 1545
101 Ga0495664_0454715 3300046477 Bacteria 767
102 Ga0495594_0025665 3300046499 Bacteria 3168
103 Ga0495608_0033410 3300046511 Unclassified 3477
104 Ga0495608_0343558 3300046511 Bacteria 919
105 Ga0495628_0030234 3300046516 Unclassified 4387
106 Ga0495628_0253201 3300046516 Unclassified 1314
107 Ga0495630_0034981 3300046517 Bacteria 3753
108 Ga0495652_0090118 3300046529 Unclassified 2510
109 Ga0495640_0079905 3300046533 Bacteria 2176
110 Ga0495586_0093808 3300046535 Bacteria 1660
111 Ga0495587_0003325 3300046536 Bacteria 10732
112 Ga0495667_0058421 3300046559 Bacteria 2534
113 Ga0495659_0084479 3300046664 Bacteria 1210
114 Ga0495657_0098812 3300046675 Bacteria 1862
115 Ga0495599_0190212 3300046678 Bacteria 1263
116 Ga0495623_0007586 3300046679 Bacteria 7042
117 Ga0495658_0025197 3300046683 Bacteria 3177
118 Ga0495658_0069471 3300046683 Bacteria 2042
119 Ga0495669_0168029 3300046684 Bacteria 1043
120 Ga0495613_0027813 3300046689 Bacteria 4208
121 Ga0495600_0213596 3300046809 Bacteria 1236
122 Ga0495604_0002729 3300047317 Bacteria 14157
123 Ga0495604_0022010 3300047317 Bacteria 5088
124 Ga0495604_0144865 3300047317 Bacteria 1694
125 Ga0495636_0124583 3300047318 Bacteria 1142
126 Ga0495674_0050253 3300047319 Bacteria 3680
127 Ga0495680_0028450 3300047322 Bacteria 4582
128 Ga0495675_0365934 3300047444 Bacteria 846
129 Ga0495684_0004991 3300047471 Bacteria 10357
130 Ga0495684_0041078 3300047471 Bacteria 3545
131 Ga0495602_0004891 3300048088 Bacteria 14033
132 Ga0495602_0128699 3300048088 Bacteria 2023
133 Ga0495602_0424037 3300048088 Bacteria 944
134 Ga0496115_0014289 3300048918 Bacteria 6011
135 Ga0501036_0053967 3300049572 Bacteria 3403
136 Ga0501038_0151812 3300049574 Bacteria 1888
137 Ga0501041_0072032 3300049577 Bacteria 2122
138 Ga0501041_0162813 3300049577 Bacteria 1395
139 Ga0501042_0037792 3300049578 Bacteria 3427
140 Ga0501046_0024996 3300049580 Unclassified 4893
141 Ga0501046_0332665 3300049580 Bacteria 1105
142 Ga0501048_0128993 3300049582 Bacteria 1788
143 Ga0501068_0355171 3300049584 Bacteria 942
144 Ga0501071_0198803 3300049587 Bacteria 1505
145 Ga0501073_0249977 3300049589 Bacteria 1224
146 Ga0501074_0449591 3300049590 Unclassified 914
147 Ga0501075_0000710 3300049591 Bacteria 20621
148 Ga0501075_0074257 3300049591 Bacteria 2572
149 Ga0501076_0015065 3300049592 Bacteria 5838
150 Ga0501076_0042283 3300049592 Bacteria 3586
151 Ga0501079_0019782 3300049741 Bacteria 5144
152 Ga0501079_0429933 3300049741 Bacteria 1037
153 Ga0501080_0244974 3300049742 Bacteria 1635
154 Ga0501081_0008554 3300049743 Bacteria 6651
155 Ga0501081_0012581 3300049743 Bacteria 5564
156 Ga0501083_0275143 3300049744 Bacteria 1095
157 Ga0501045_0104105 3300049824 Bacteria 2102
158 nmdc:mga05p37_255061_c1 3300050507 Bacteria 2102
159 nmdc:mga05p37_295436_c1 3300050507 Bacteria 1927
160 nmdc:mga0n895_271045_c1 3300050512 Unclassified 1722
161 nmdc:mga0rr50_126143_c1 3300050513 Bacteria 2044
162 nmdc:mga0sz30_17088_c2 3300050516 Unclassified 1547
163 Ga0495601_0252963 3300053077 Bacteria 1150
164 Ga0501084_0009814 3300054114 Bacteria 7915
165 Ga0501084_0108404 3300054114 Bacteria 2333
166 Ga0501082_0091429 3300060353 Bacteria 2627
167 Ga0501082_0148029 3300060353 Bacteria 2039
168 Ga0530510_0005198 3300061734 Bacteria 8983
169 Ga0530510_0118291 3300061734 Bacteria 1944
170 Ga0075428_100040144
171 ARcpr5oldR_c008228
172 Ga0065707_10084573
173 Ga0070709_10128115
174 Ga0070713_100416394
175 Ga0068867_100420573
176 Ga0070706_100200698
177 Ga0070706_100382439
178 Ga0070697_100199738
179 Ga0070672_100270195
180 Ga0070665_100000119
181 Ga0070704_100124224
182 Ga0068861_100077853
183 Ga0068863_101269945
184 Ga0068860_100334669
185 Ga0081455_10100441
186 Ga0070717_10886479
187 Ga0097621_100437263
188 Ga0068871_100004297
189 Ga0075428_100468615
190 Ga0075428_101068351
191 Ga0075431_100097526
192 Ga0075431_100266299
193 Ga0075433_10925867
194 Ga0075434_100080891
195 Ga0075435_100071467
196 Ga0075435_100141440
197 Ga0105240_10000136
198 Ga0105240_10177872
199 Ga0114129_10457971
200 Ga0114129_10678604
201 Ga0105237_10187631
202 Ga0105238_10010716
203 Ga0105249_10412960
204 Ga0105239_10299905
205 Ga0157370_10187252
206 Ga0157378_10035541
207 Ga0163162_10382331
208 Ga0157380_10795501
209 Ga0157376_10026836
210 Ga0157376_10135556
211 Ga0157376_10670923
212 Ga0213871_10014406
213 Ga0224572_1013011
214 Ga0207692_10072782
215 Ga0207642_10119589
216 Ga0207699_10130261
217 Ga0207705_10373838
218 Ga0207684_10265619
219 Ga0207684_10313512
220 Ga0207695_10000226
221 Ga0207657_10008528
222 Ga0207649_10000331
223 Ga0207681_10186611
224 Ga0207694_10064067
225 Ga0207650_10651791
226 Ga0207691_10616598
227 Ga0207712_10502142
228 Ga0207668_10166074
229 Ga0207702_10737479
230 Ga0207641_10137945
231 Ga0207641_10504078
232 Ga0207648_10090892
233 Ga0207675_100108748
234 Ga0268266_10000003
235 Ga0268265_10159211
236 Ga0268264_10234310
237 Ga0265325_10155358
238 Ga0316579_10025075
239 Ga0265314_10023279
240 Ga0373934_0115177
241 Ga0373954_0012445
242 Ga0373954_0172240
243 Ga0373956_0028329
244 Ga0373956_0170820
245 Ga0373955_0003831
246 Ga0373955_0118707
247 Ga0316574_0013229
248 Ga0373924_0155423
249 Ga0373933_0000285
250 Ga0373937_0000820
251 Ga0373937_0270464
252 Ga0373937_0401325
253 Ga0373925_0151389
254 Ga0436360_0058853
255 Ga0436361_0074756
256 Ga0436363_0029442
257 Ga0451577_0000336
258 Ga0451577_0307843
259 Ga0451577_1156263
260 Ga0453684_0000052
261 Ga0453684_0037674
262 Ga0451576_0507057
263 Ga0451576_0660090
264 Ga0451576_0664515
265 Ga0495592_0029172
266 Ga0495592_0309512
267 Ga0495629_0238661
268 Ga0495651_0080404
269 Ga0495653_0163224
270 Ga0495664_0454715
271 Ga0495594_0025665
272 Ga0495608_0033410
273 Ga0495608_0343558
274 Ga0495628_0030234
275 Ga0495628_0253201
276 Ga0495630_0034981
277 Ga0495652_0090118
278 Ga0495640_0079905
279 Ga0495586_0093808
280 Ga0495587_0003325
281 Ga0495667_0058421
282 Ga0495659_0084479
283 Ga0495657_0098812
284 Ga0495599_0190212
285 Ga0495623_0007586
286 Ga0495658_0025197
287 Ga0495658_0069471
288 Ga0495669_0168029
289 Ga0495613_0027813
290 Ga0495600_0213596
291 Ga0495604_0002729
292 Ga0495604_0022010
293 Ga0495604_0144865
294 Ga0495636_0124583
295 Ga0495674_0050253
296 Ga0495680_0028450
297 Ga0495675_0365934
298 Ga0495684_0004991
299 Ga0495684_0041078
300 Ga0495602_0004891
301 Ga0495602_0128699
302 Ga0495602_0424037
303 Ga0496115_0014289
304 Ga0501036_0053967
305 Ga0501038_0151812
306 Ga0501041_0072032
307 Ga0501041_0162813
308 Ga0501042_0037792
309 Ga0501046_0024996
310 Ga0501046_0332665
311 Ga0501048_0128993
312 Ga0501068_0355171
313 Ga0501071_0198803
314 Ga0501073_0249977
315 Ga0501074_0449591
316 Ga0501075_0000710
317 Ga0501075_0074257
318 Ga0501076_0015065
319 Ga0501076_0042283
320 Ga0501079_0019782
321 Ga0501079_0429933
322 Ga0501080_0244974
323 Ga0501081_0008554
324 Ga0501081_0012581
325 Ga0501083_0275143
326 Ga0501045_0104105
327 nmdc:mga05p37_255061_c1
328 nmdc:mga05p37_295436_c1
329 nmdc:mga0n895_271045_c1
330 nmdc:mga0rr50_126143_c1
331 nmdc:mga0sz30_17088_c2
332 Ga0495601_0252963
333 Ga0501084_0009814
334 Ga0501084_0108404
335 Ga0501082_0091429
336 Ga0501082_0148029
337 Ga0530510_0005198
338 Ga0530510_0118291

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04955

HupE_UreJ

HupE / UreJ protein

50

230

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8acy-assembly1.cif.gz_D x-ray structure of na+-nqr from vibrio cholerae at 3.5 a resolution 0.4595 65 233
6hzp-assembly1.cif.gz_A crystal structure of a pot family transporter in complex with 5-aminolevulinic acid 0.4543 42 234
7zh6-assembly1.cif.gz_A structure of human oct3 in complex with inhibitor corticosterone 0.4444 72 230
6exs-assembly1.cif.gz_A crystal structure of a pot family transporter in complex with thioalcohol conjugated peptide. 0.4363 37 227
8jtc-assembly1.cif.gz_A human vmat2 complex with reserpine 0.429 46 231
ID Description Score Start End Superfamily
af_P53322_81_280_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.543 75 230 1.20.1250.20
af_P09836_19_223_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4917 82 231 1.20.1250.20
af_A0A0G2L3Z8_323_518_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.489 88 234 1.20.1250.20
af_P76264_30_182_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4768 86 229 1.20.1250.20
af_Q7TM99_296_483_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4723 85 231 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A3B8SS91-F1-model_v4 Ni/Fe hydrogenase 0.9898 74 231 GO:0016020
AF-A0A3B8SS91-F1-model_v4 Ni/Fe hydrogenase 0.9714 74 231 GO:0016020
AF-A0A292ECE4-F1-model_v4 Urease accessory protein 0.9703 89 231 GO:0016020
AF-A0A386USN2-F1-model_v4 Ni/Fe hydrogenase 0.9681 89 232 GO:0016020
AF-A0A4R6EGV4-F1-model_v4 Urease accessory protein 0.968 82 233 GO:0016020

Map