F253315

General Info

Members Datasets Scaffolds Average Seq Length
168 93 336 207

Family's Representative Sequence

Representative Sequence 3300046537|Ga0495598_0000164|Ga0495598_0000164_7420_8109
Length 229
Sequence MTSTERPSLSALCGGKAAVPAHQMAIKESSDERNPTAPVADSSLSRTTPARTPKDYLALAIATCGVGYLPLAPGTWGSLVGIGVYAVVRGIGLKLMFDLAAARNLTLLHVYSVTLILELLAAIVITFIGIWAASRTEKLAGRKDPSKVVIDEVAGQFIALLPVPFLINEAWWAAILAFVFFRFFDIVKPYPARKFESLESGLGIMADDIVAGIYAAIVVAIAVTISWLF

Samples

Sample ID Description Type Environment
1 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
80 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
81 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
82 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
83 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
84 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
85 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
86 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
87 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
88 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
89 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
93 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.6
Rhizosphere 99.4
Stem 0
Stem Tuber 0
Unclassified 25.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495598_0000164 3300046537 Bacteria 11408
2 JGI24748J21848_1000028 3300002074 Bacteria 91962
3 JGI24034J26672_10000051 3300002239 Bacteria 49831
4 Ga0065704_10104173 3300005289 Bacteria 2138
5 Ga0065704_10207757 3300005289 Bacteria 1120
6 Ga0065707_10024204 3300005295 Bacteria 1326
7 Ga0065707_10155932 3300005295 Bacteria 1580
8 Ga0065707_10197562 3300005295 Bacteria 1312
9 Ga0068869_100005533 3300005334 Bacteria 7953
10 Ga0070682_100000149 3300005337 Bacteria 55271
11 Ga0070687_100132593 3300005343 Unclassified 1440
12 Ga0070668_100011993 3300005347 Bacteria 6456
13 Ga0070669_100005402 3300005353 Bacteria 9217
14 Ga0070671_100059015 3300005355 Unclassified 3193
15 Ga0070673_100132386 3300005364 Bacteria 2094
16 Ga0070703_10000098 3300005406 Bacteria 44872
17 Ga0070701_10029922 3300005438 Bacteria 2690
18 Ga0070701_10293197 3300005438 Unclassified 997
19 Ga0070705_100049528 3300005440 Bacteria 2440
20 Ga0070705_100114888 3300005440 Bacteria 1727
21 Ga0070700_100038302 3300005441 Unclassified 2921
22 Ga0070700_100218814 3300005441 Bacteria 1348
23 Ga0070694_100001551 3300005444 Bacteria 13513
24 Ga0070694_100237663 3300005444 Bacteria 1373
25 Ga0070708_100192174 3300005445 Unclassified 1909
26 Ga0070708_100343414 3300005445 Unclassified 1407
27 Ga0070706_100002273 3300005467 Bacteria 19457
28 Ga0070706_100021911 3300005467 Bacteria 5883
29 Ga0070706_100039598 3300005467 Bacteria 4351
30 Ga0070706_100046252 3300005467 Bacteria 4018
31 Ga0070706_100665669 3300005467 Unclassified 966
32 Ga0070707_100010433 3300005468 Bacteria 8652
33 Ga0070707_100314328 3300005468 Unclassified 1522
34 Ga0070707_100523369 3300005468 Bacteria 1148
35 Ga0070707_100663062 3300005468 Bacteria 1006
36 Ga0070698_100000886 3300005471 Bacteria 32912
37 Ga0070698_100087491 3300005471 Bacteria 3101
38 Ga0070698_100162125 3300005471 Bacteria 2180
39 Ga0070698_100309497 3300005471 Viruses 1510
40 Ga0070698_100408834 3300005471 Bacteria 1291
41 Ga0070699_100114583 3300005518 Bacteria 2368
42 Ga0070699_100143876 3300005518 Unclassified 2107
43 Ga0070697_100000253 3300005536 Bacteria 43200
44 Ga0070697_100371710 3300005536 Unclassified 1237
45 Ga0070697_100473882 3300005536 Bacteria 1093
46 Ga0070672_100072219 3300005543 Bacteria 2748
47 Ga0070686_100053498 3300005544 Bacteria 2578
48 Ga0070695_100352438 3300005545 Bacteria 1103
49 Ga0070695_100353382 3300005545 Unclassified 1102
50 Ga0070695_100458776 3300005545 Unclassified 978
51 Ga0070696_100199926 3300005546 Unclassified 1491
52 Ga0070696_100241786 3300005546 Unclassified 1362
53 Ga0070696_100391032 3300005546 Bacteria 1086
54 Ga0070696_100398095 3300005546 Unclassified 1077
55 Ga0070704_100003619 3300005549 Bacteria 8882
56 Ga0070704_100326888 3300005549 Bacteria 1287
57 Ga0070704_100493586 3300005549 Bacteria 1061
58 Ga0070702_100451758 3300005615 Unclassified 932
59 Ga0068859_100034409 3300005617 Bacteria 5085
60 Ga0068866_10247743 3300005718 Bacteria 1088
61 Ga0068861_100111598 3300005719 Unclassified 2191
62 Ga0068861_100176618 3300005719 Bacteria 1774
63 Ga0068863_100030431 3300005841 Bacteria 5155
64 Ga0068858_100000567 3300005842 Bacteria 38567
65 Ga0068858_100088494 3300005842 Bacteria 2881
66 Ga0070716_100000475 3300006173 Bacteria 16608
67 Ga0075433_10072365 3300006852 Unclassified 3031
68 Ga0075433_10730765 3300006852 Unclassified 866
69 Ga0075434_100013217 3300006871 Bacteria 7847
70 Ga0075434_100816828 3300006871 Unclassified 948
71 Ga0068865_100063272 3300006881 Bacteria 2600
72 Ga0097620_100034409 3300006931 Bacteria 5085
73 Ga0099794_10300722 3300007265 Bacteria 831
74 Ga0111539_10029406 3300009094 Bacteria 6692
75 Ga0111539_10156899 3300009094 Bacteria 2663
76 Ga0111539_10498052 3300009094 Bacteria 1419
77 Ga0105245_10443128 3300009098 Bacteria 1306
78 Ga0105245_10522122 3300009098 Unclassified 1206
79 Ga0105247_10000252 3300009101 Bacteria 49875
80 Ga0114129_10021832 3300009147 Bacteria 9086
81 Ga0114129_10086588 3300009147 Bacteria 4345
82 Ga0114129_10097326 3300009147 Unclassified 4074
83 Ga0114129_10212349 3300009147 Unclassified 2615
84 Ga0114129_10219276 3300009147 Bacteria 2567
85 Ga0114129_10902895 3300009147 Bacteria 1119
86 Ga0114129_11316814 3300009147 Bacteria 895
87 Ga0105243_10000169 3300009148 Bacteria 74793
88 Ga0105243_10001398 3300009148 Bacteria 21342
89 Ga0105243_10181791 3300009148 Bacteria 1829
90 Ga0105241_10261707 3300009174 Bacteria 1470
91 Ga0105242_10000692 3300009176 Bacteria 26430
92 Ga0105242_10001495 3300009176 Bacteria 18410
93 Ga0105242_10303051 3300009176 Bacteria 1459
94 Ga0105242_10702504 3300009176 Unclassified 990
95 Ga0105242_11164284 3300009176 Unclassified 788
96 Ga0105248_10677660 3300009177 Bacteria 1163
97 Ga0105249_10000112 3300009553 Bacteria 108891
98 Ga0105249_10508473 3300009553 Bacteria 1251
99 Ga0105246_10196911 3300011119 Bacteria 1564
100 Ga0157378_10000223 3300013297 Bacteria 55279
101 Ga0157378_10112759 3300013297 Bacteria 2495
102 Ga0157378_10894781 3300013297 Unclassified 918
103 Ga0163162_10000055 3300013306 Bacteria 109443
104 Ga0163162_10106027 3300013306 Unclassified 2905
105 Ga0163162_10278205 3300013306 Unclassified 1806
106 Ga0157375_10002887 3300013308 Bacteria 14893
107 Ga0157380_10046396 3300014326 Bacteria 3412
108 Ga0157380_10116539 3300014326 Bacteria 2255
109 Ga0157380_11348016 3300014326 Unclassified 762
110 Ga0207653_10000177 3300025885 Bacteria 44860
111 Ga0207710_10000001 3300025900 Bacteria 1797433
112 Ga0207684_10003803 3300025910 Bacteria 14561
113 Ga0207684_10044088 3300025910 Unclassified 3782
114 Ga0207684_10493352 3300025910 Unclassified 1050
115 Ga0207646_10303185 3300025922 Unclassified 1443
116 Ga0207646_10329670 3300025922 Bacteria 1379
117 Ga0207681_10008033 3300025923 Bacteria 6458
118 Ga0207681_10165306 3300025923 Bacteria 1672
119 Ga0207650_10005794 3300025925 Bacteria 8432
120 Ga0207659_10661461 3300025926 Unclassified 893
121 Ga0207644_10000322 3300025931 Bacteria 31217
122 Ga0207686_10000082 3300025934 Bacteria 79873
123 Ga0207686_10000499 3300025934 Bacteria 25729
124 Ga0207709_10000219 3300025935 Bacteria 72376
125 Ga0207709_10000984 3300025935 Bacteria 21288
126 Ga0207665_10001291 3300025939 Bacteria 16936
127 Ga0207691_10199992 3300025940 Unclassified 1740
128 Ga0207691_10293114 3300025940 Bacteria 1399
129 Ga0207689_10010213 3300025942 Bacteria 8089
130 Ga0207689_10024484 3300025942 Bacteria 5065
131 Ga0207689_10035706 3300025942 Bacteria 4128
132 Ga0207651_10240483 3300025960 Bacteria 1475
133 Ga0207712_10000416 3300025961 Bacteria 36519
134 Ga0207712_10101939 3300025961 Unclassified 2136
135 Ga0207712_10446645 3300025961 Bacteria 1096
136 Ga0207712_10748862 3300025961 Unclassified 856
137 Ga0207668_10017176 3300025972 Bacteria 4529
138 Ga0207703_10002183 3300026035 Bacteria 17177
139 Ga0207708_10016034 3300026075 Bacteria 5628
140 Ga0207708_10027756 3300026075 Bacteria 4286
141 Ga0207708_10562475 3300026075 Unclassified 963
142 Ga0207641_10028440 3300026088 Bacteria 4620
143 Ga0207676_10644312 3300026095 Unclassified 1022
144 Ga0207675_100044131 3300026118 Bacteria 4165
145 Ga0207675_100045592 3300026118 Unclassified 4096
146 Ga0207675_100175524 3300026118 Unclassified 2050
147 Ga0207428_10219491 3300027907 Bacteria 1426
148 Ga0268264_10523357 3300028381 Bacteria 1160
149 Ga0268264_11063197 3300028381 Unclassified 817
150 Ga0395905_0300927 3300037471 Bacteria 1491
151 Ga0242420_001309 3300038996 Unclassified 3281
152 Ga0439439_0074166 3300041406 Bacteria 914
153 Ga0439457_039877 3300042014 Bacteria 1046
154 Ga0439434_0029504 3300042435 Bacteria 1663
155 Ga0451577_0226361 3300042876 Bacteria 1691
156 Ga0453683_0080166 3300044673 Bacteria 2045
157 Ga0495610_0052566 3300046512 Bacteria 1977
158 Ga0495663_0000573 3300046525 Bacteria 12949
159 Ga0495621_0002178 3300046539 Bacteria 5211
160 Ga0495621_0087756 3300046539 Bacteria 1168
161 Ga0495672_0012770 3300047320 Bacteria 5838
162 Ga0496106_0032673 3300048909 Bacteria 3881
163 nmdc:mga05p37_273735_c1 3300050507 Bacteria 2016
164 nmdc:mga05p37_956768_c1 3300050507 Bacteria 916
165 nmdc:mga09592_814509_c1 3300050508 Bacteria 789
166 nmdc:mga08y16_296344_c1 3300050511 Bacteria 1667
167 nmdc:mga08y16_508841_c1 3300050511 Bacteria 1223
168 nmdc:mga0n895_271771_c1 3300050512 Unclassified 1719
169 Ga0495598_0000164
170 JGI24748J21848_1000028
171 JGI24034J26672_10000051
172 Ga0065704_10104173
173 Ga0065704_10207757
174 Ga0065707_10024204
175 Ga0065707_10155932
176 Ga0065707_10197562
177 Ga0068869_100005533
178 Ga0070682_100000149
179 Ga0070687_100132593
180 Ga0070668_100011993
181 Ga0070669_100005402
182 Ga0070671_100059015
183 Ga0070673_100132386
184 Ga0070703_10000098
185 Ga0070701_10029922
186 Ga0070701_10293197
187 Ga0070705_100049528
188 Ga0070705_100114888
189 Ga0070700_100038302
190 Ga0070700_100218814
191 Ga0070694_100001551
192 Ga0070694_100237663
193 Ga0070708_100192174
194 Ga0070708_100343414
195 Ga0070706_100002273
196 Ga0070706_100021911
197 Ga0070706_100039598
198 Ga0070706_100046252
199 Ga0070706_100665669
200 Ga0070707_100010433
201 Ga0070707_100314328
202 Ga0070707_100523369
203 Ga0070707_100663062
204 Ga0070698_100000886
205 Ga0070698_100087491
206 Ga0070698_100162125
207 Ga0070698_100309497
208 Ga0070698_100408834
209 Ga0070699_100114583
210 Ga0070699_100143876
211 Ga0070697_100000253
212 Ga0070697_100371710
213 Ga0070697_100473882
214 Ga0070672_100072219
215 Ga0070686_100053498
216 Ga0070695_100352438
217 Ga0070695_100353382
218 Ga0070695_100458776
219 Ga0070696_100199926
220 Ga0070696_100241786
221 Ga0070696_100391032
222 Ga0070696_100398095
223 Ga0070704_100003619
224 Ga0070704_100326888
225 Ga0070704_100493586
226 Ga0070702_100451758
227 Ga0068859_100034409
228 Ga0068866_10247743
229 Ga0068861_100111598
230 Ga0068861_100176618
231 Ga0068863_100030431
232 Ga0068858_100000567
233 Ga0068858_100088494
234 Ga0070716_100000475
235 Ga0075433_10072365
236 Ga0075433_10730765
237 Ga0075434_100013217
238 Ga0075434_100816828
239 Ga0068865_100063272
240 Ga0097620_100034409
241 Ga0099794_10300722
242 Ga0111539_10029406
243 Ga0111539_10156899
244 Ga0111539_10498052
245 Ga0105245_10443128
246 Ga0105245_10522122
247 Ga0105247_10000252
248 Ga0114129_10021832
249 Ga0114129_10086588
250 Ga0114129_10097326
251 Ga0114129_10212349
252 Ga0114129_10219276
253 Ga0114129_10902895
254 Ga0114129_11316814
255 Ga0105243_10000169
256 Ga0105243_10001398
257 Ga0105243_10181791
258 Ga0105241_10261707
259 Ga0105242_10000692
260 Ga0105242_10001495
261 Ga0105242_10303051
262 Ga0105242_10702504
263 Ga0105242_11164284
264 Ga0105248_10677660
265 Ga0105249_10000112
266 Ga0105249_10508473
267 Ga0105246_10196911
268 Ga0157378_10000223
269 Ga0157378_10112759
270 Ga0157378_10894781
271 Ga0163162_10000055
272 Ga0163162_10106027
273 Ga0163162_10278205
274 Ga0157375_10002887
275 Ga0157380_10046396
276 Ga0157380_10116539
277 Ga0157380_11348016
278 Ga0207653_10000177
279 Ga0207710_10000001
280 Ga0207684_10003803
281 Ga0207684_10044088
282 Ga0207684_10493352
283 Ga0207646_10303185
284 Ga0207646_10329670
285 Ga0207681_10008033
286 Ga0207681_10165306
287 Ga0207650_10005794
288 Ga0207659_10661461
289 Ga0207644_10000322
290 Ga0207686_10000082
291 Ga0207686_10000499
292 Ga0207709_10000219
293 Ga0207709_10000984
294 Ga0207665_10001291
295 Ga0207691_10199992
296 Ga0207691_10293114
297 Ga0207689_10010213
298 Ga0207689_10024484
299 Ga0207689_10035706
300 Ga0207651_10240483
301 Ga0207712_10000416
302 Ga0207712_10101939
303 Ga0207712_10446645
304 Ga0207712_10748862
305 Ga0207668_10017176
306 Ga0207703_10002183
307 Ga0207708_10016034
308 Ga0207708_10027756
309 Ga0207708_10562475
310 Ga0207641_10028440
311 Ga0207676_10644312
312 Ga0207675_100044131
313 Ga0207675_100045592
314 Ga0207675_100175524
315 Ga0207428_10219491
316 Ga0268264_10523357
317 Ga0268264_11063197
318 Ga0395905_0300927
319 Ga0242420_001309
320 Ga0439439_0074166
321 Ga0439457_039877
322 Ga0439434_0029504
323 Ga0451577_0226361
324 Ga0453683_0080166
325 Ga0495610_0052566
326 Ga0495663_0000573
327 Ga0495621_0002178
328 Ga0495621_0087756
329 Ga0495672_0012770
330 Ga0496106_0032673
331 nmdc:mga05p37_273735_c1
332 nmdc:mga05p37_956768_c1
333 nmdc:mga09592_814509_c1
334 nmdc:mga08y16_296344_c1
335 nmdc:mga08y16_508841_c1
336 nmdc:mga0n895_271771_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04608

PgpA

Phosphatidylglycerophosphatase A

59

223

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7r8b-assembly1.cif.gz_B the structure of human abcg5/abcg8 supplemented with cholesterol 0.4168 32 209
6mit-assembly1.cif.gz_G lptbfgc from enterobacter cloacae 0.4047 111 200
7r89-assembly1.cif.gz_B the structure of human abcg5/abcg8 purified from yeast 0.4028 32 209
7xgg-assembly2.cif.gz_D crystal structure of bcl-xl in complex with computationally designed inhibitor protein 0.397 35 203
8fed-assembly1.cif.gz_K structure of mce1-lucb complex from mycobacterium smegmatis (map1) 0.3945 54 199
ID Description Score Start End Superfamily
af_P49810_347_440_1.10.472.100 Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Presenilin 0.5037 128 203 1.10.472.100
af_P97887_355_460_1.10.472.100 Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Presenilin 0.5009 128 203 1.10.472.100
af_I1MT67_365_449_1.10.472.100 Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Presenilin 0.4997 128 203 1.10.472.100
af_I1MT67_365_449_1.10.472.100 Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Presenilin 0.4368 128 203 1.10.472.100
af_P49810_347_440_1.10.472.100 Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Presenilin 0.4238 128 203 1.10.472.100
ID Description Score Start End GO Terms
AF-A0A381UAA8-F1-model_v4 YutG/PgpA domain-containing protein 0.9587 91 200 GO:0006629
GO:0008962
GO:0016020
AF-A0A800FK09-F1-model_v4 Phosphatidylglycerophosphatase A 0.9373 117 200 GO:0006629
GO:0008962
GO:0016020
AF-A0A7W1LY98-F1-model_v4 Phosphatidylglycerophosphatase A 0.937 35 203 GO:0006629
GO:0008962
GO:0016020
AF-A0A1Z9LWR2-F1-model_v4 YutG/PgpA domain-containing protein 0.9364 93 201 GO:0006629
GO:0008962
GO:0016020
AF-A0A1Q7SLA8-F1-model_v4 YutG/PgpA domain-containing protein 0.9322 92 202 GO:0006629
GO:0008962
GO:0016020

Map