F252931

General Info

Members Datasets Scaffolds Average Seq Length
168 120 336 391

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100040548|Ga0307408_1000405482
Length 432
Sequence LKLAGQDAGFFEQGNNMFDYLIVGAGFAGSVLAERLARGSGKRVLICDKRPHIGGNAYDHYNDDGILVHKYGPHIFHTNSADVFDYLTRFTEWREYQHSVLACVDGMLVPIPINLNTINKLYGLSLNSLEVEEFFATLRETREPVRTSEDVVVNAVGRELYEKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDDRYFTDTYQAMPKHGYTRMFENMLDHPNIKVVLNCDYREIQKEVAFREMIYSGPVDAFFDYRYGKLPYRSLEFKHETHDTEVFQSAPVVNYPQNQPYTRITEFKYLTGQKHNKTGIVYEYPRAEGDPYYPIPRPENAELYAKYKALADARPDVHFVGRLATYKYYNMDQIVAQALTVYGKIVGMKRKDAAIAQTAVVPTTAAAISYAKPNGNGTAKVLTNGKSNGGDNGYQNLNSVS

Samples

Sample ID Description Type Environment
1 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
54 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
84 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
90 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
91 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
97 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
103 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
104 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
107 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
108 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
109 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
110 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
111 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
112 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
113 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
114 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
115 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
116 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
117 3300059660 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 161R_SW_T3_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
119 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
120 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.62
Metatranscriptomes 1.19
Isolates 1.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.55
Nodule 0
Rhizoplane 0
Rhizosphere 82.74
Stem 0
Stem Tuber 0
Unclassified 6.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307408_100040548 3300031548 Bacteria 3297
2 JGI25406J46586_10000587 3300003203 Bacteria 17133
3 Ga0058860_12034632 3300004801 Bacteria 2232
4 Ga0070658_10005434 3300005327 Bacteria 10338
5 Ga0070683_100233946 3300005329 Bacteria 1747
6 Ga0070690_100054022 3300005330 Unclassified 2571
7 Ga0070690_100084957 3300005330 Bacteria 2075
8 Ga0070670_100035449 3300005331 Bacteria 4295
9 Ga0070670_100043197 3300005331 Unclassified 3875
10 Ga0070666_10015185 3300005335 Bacteria 4910
11 Ga0068868_100004948 3300005338 Bacteria 9361
12 Ga0068868_100017385 3300005338 Bacteria 5358
13 Ga0070691_10048566 3300005341 Bacteria 2020
14 Ga0070661_100017147 3300005344 Bacteria 5133
15 Ga0070661_100088647 3300005344 Unclassified 2290
16 Ga0070688_100071853 3300005365 Unclassified 2216
17 Ga0070659_100013230 3300005366 Bacteria 6137
18 Ga0070667_100005779 3300005367 Bacteria 10322
19 Ga0070714_100093709 3300005435 Bacteria 2634
20 Ga0070663_100088343 3300005455 Bacteria 2292
21 Ga0070662_100025229 3300005457 Bacteria 4103
22 Ga0070662_100053208 3300005457 Bacteria 2930
23 Ga0070679_100048332 3300005530 Bacteria 4239
24 Ga0068853_100005891 3300005539 Bacteria 9666
25 Ga0068853_100041043 3300005539 Bacteria 3950
26 Ga0068853_100343384 3300005539 Bacteria 1387
27 Ga0070672_100140032 3300005543 Bacteria 1995
28 Ga0070665_100000615 3300005548 Bacteria 48872
29 Ga0070665_100223306 3300005548 Bacteria 1884
30 Ga0068855_100011194 3300005563 Bacteria 10833
31 Ga0068855_100037029 3300005563 Bacteria 5804
32 Ga0070664_100067571 3300005564 Bacteria 3055
33 Ga0070664_100092953 3300005564 Bacteria 2613
34 Ga0070664_100245182 3300005564 Bacteria 1609
35 Ga0068857_100012745 3300005577 Bacteria 7328
36 Ga0068854_100169023 3300005578 Bacteria 1700
37 Ga0068856_100169180 3300005614 Bacteria 2197
38 Ga0068859_100118427 3300005617 Bacteria 2714
39 Ga0068864_100016955 3300005618 Bacteria 6068
40 Ga0068851_10026479 3300005834 Bacteria 2850
41 Ga0068863_100081612 3300005841 Bacteria 3063
42 Ga0068858_100256726 3300005842 Bacteria 1661
43 Ga0081539_10000871 3300005985 Bacteria 57873
44 Ga0070717_10000243 3300006028 Bacteria 37415
45 Ga0075362_10025357 3300006177 Bacteria 2523
46 Ga0097621_100010880 3300006237 Bacteria 6677
47 Ga0075370_10041251 3300006353 Unclassified 2605
48 Ga0075433_10040179 3300006852 Bacteria 4048
49 Ga0097620_100118428 3300006931 Bacteria 2714
50 Ga0105240_10000532 3300009093 Bacteria 70311
51 Ga0111539_10164960 3300009094 Bacteria 2591
52 Ga0105242_10059512 3300009176 Bacteria 3135
53 Ga0105248_10010869 3300009177 Bacteria 10049
54 Ga0105248_10358572 3300009177 Bacteria 1641
55 Ga0105238_10253333 3300009551 Bacteria 1739
56 Ga0157373_10011436 3300013100 Bacteria 6527
57 Ga0157369_10094570 3300013105 Bacteria 3190
58 Ga0157369_10119472 3300013105 Bacteria 2797
59 Ga0157374_10029272 3300013296 Bacteria 4985
60 Ga0163162_10001292 3300013306 Bacteria 23413
61 Ga0163162_10001348 3300013306 Bacteria 22872
62 Ga0163162_10023378 3300013306 Bacteria 6100
63 Ga0157372_10054546 3300013307 Bacteria 4459
64 Ga0157372_10063148 3300013307 Bacteria 4152
65 Ga0157372_10159642 3300013307 Bacteria 2605
66 Ga0157372_10241765 3300013307 Bacteria 2095
67 Ga0157375_10026903 3300013308 Bacteria 5369
68 Ga0163163_10094382 3300014325 Bacteria 3010
69 Ga0163163_10222670 3300014325 Unclassified 1935
70 Ga0157379_10021469 3300014968 Bacteria 5715
71 Ga0157376_10001522 3300014969 Bacteria 15318
72 Ga0157376_10038187 3300014969 Bacteria 3905
73 Ga0213872_10040015 3300021361 Bacteria 2140
74 Ga0213872_10069417 3300021361 Bacteria 1589
75 Ga0213874_10021908 3300021377 Bacteria 1767
76 Ga0213876_10014047 3300021384 Unclassified 4245
77 Ga0213876_10017237 3300021384 Bacteria 3813
78 Ga0213876_10024460 3300021384 Bacteria 3188
79 Ga0207697_10004155 3300025315 Bacteria 6977
80 Ga0207705_10011579 3300025909 Bacteria 6376
81 Ga0207695_10000177 3300025913 Bacteria 185955
82 Ga0207652_10093102 3300025921 Bacteria 2651
83 Ga0207652_10325398 3300025921 Bacteria 1388
84 Ga0207694_10143583 3300025924 Bacteria 1920
85 Ga0207644_10097794 3300025931 Unclassified 2199
86 Ga0207686_10040544 3300025934 Bacteria 2832
87 Ga0207665_10021798 3300025939 Bacteria 4214
88 Ga0207691_10024295 3300025940 Bacteria 5699
89 Ga0207691_10165983 3300025940 Bacteria 1935
90 Ga0207711_10025184 3300025941 Bacteria 4992
91 Ga0207711_10101137 3300025941 Bacteria 2550
92 Ga0207679_10200924 3300025945 Bacteria 1665
93 Ga0207679_10239918 3300025945 Bacteria 1535
94 Ga0207667_10032901 3300025949 Bacteria 5580
95 Ga0207640_10166071 3300025981 Bacteria 1639
96 Ga0207677_10081712 3300026023 Bacteria 2319
97 Ga0207639_10054930 3300026041 Bacteria 3046
98 Ga0207639_10131098 3300026041 Bacteria 2075
99 Ga0207702_10115466 3300026078 Bacteria 2394
100 Ga0207641_10089393 3300026088 Bacteria 2692
101 Ga0207641_10183403 3300026088 Unclassified 1918
102 Ga0207674_10089891 3300026116 Bacteria 3063
103 Ga0207674_10367605 3300026116 Bacteria 1390
104 Ga0207683_10111481 3300026121 Unclassified 2450
105 Ga0268266_10000575 3300028379 Bacteria 50661
106 Ga0307513_10001943 3300031456 Bacteria 29245
107 Ga0307408_100065084 3300031548 Bacteria 2673
108 Ga0307405_10028337 3300031731 Bacteria 3260
109 Ga0307413_10006853 3300031824 Bacteria 5241
110 Ga0307413_10036849 3300031824 Bacteria 2820
111 Ga0307410_10087399 3300031852 Bacteria 2205
112 Ga0307410_10148267 3300031852 Bacteria 1743
113 Ga0307410_10173499 3300031852 Bacteria 1627
114 Ga0307407_10056358 3300031903 Bacteria 2275
115 Ga0307409_100037695 3300031995 Bacteria 3566
116 Ga0307409_100194430 3300031995 Bacteria 1809
117 Ga0307416_100072564 3300032002 Bacteria 2866
118 Ga0307416_100074333 3300032002 Bacteria 2838
119 Ga0307414_10028899 3300032004 Bacteria 3602
120 Ga0307411_10002348 3300032005 Bacteria 8318
121 Ga0307411_10027170 3300032005 Bacteria 3458
122 Ga0307411_10032849 3300032005 Bacteria 3212
123 Ga0307411_10160028 3300032005 Bacteria 1685
124 Ga0307415_100048263 3300032126 Bacteria 2872
125 Ga0307415_100128345 3300032126 Bacteria 1915
126 Ga0395905_0193497 3300037471 Bacteria 1907
127 Ga0436364_1185227 3300037853 Bacteria 3087
128 Ga0436364_1421774 3300037853 Bacteria 4136
129 Ga0395901_0456561 3300038443 Bacteria 1306
130 Ga0436365_0109684 3300039437 Bacteria 2532
131 Ga0436365_0429918 3300039437 Bacteria 26467
132 Ga0436365_0543491 3300039437 Bacteria 1501
133 Ga0436365_1206841 3300039437 Unclassified 3379
134 Ga0436365_1345967 3300039437 Bacteria 27431
135 Ga0436363_1643789 3300039450 Bacteria 4552
136 Ga0451853_0606358 3300041512 Bacteria 3396
137 Ga0451853_1981207 3300041512 Bacteria 1941
138 Ga0466966_0004735 3300044684 Bacteria 8952
139 Ga0466963_0002177 3300044694 Bacteria 10822
140 Ga0466957_0032699 3300044842 Bacteria 3116
141 Ga0466967_0000805 3300045976 Bacteria 16410
142 Ga0495668_0000102 3300046616 Bacteria 137192
143 Ga0501043_0041094 3300049579 Bacteria 3634
144 Ga0501046_0029020 3300049580 Bacteria 4502
145 Ga0501048_0037509 3300049582 Bacteria 3481
146 Ga0501070_0022350 3300049586 Bacteria 5297
147 Ga0501072_0146700 3300049588 Bacteria 1881
148 Ga0501075_0012940 3300049591 Bacteria 5944
149 Ga0501077_0000041 3300049593 Bacteria 65224
150 Ga0501221_012438 3300049704 Bacteria 1549
151 Ga0501080_0001083 3300049742 Bacteria 22439
152 Ga0501081_0042893 3300049743 Bacteria 3101
153 Ga0501044_0021643 3300049823 Bacteria 6856
154 Ga0501044_0067908 3300049823 Bacteria 3632
155 nmdc:mga03683_473_c2 3300050489 Bacteria 5015
156 nmdc:mga0k408_1596_c1 3300050493 Bacteria 12271
157 nmdc:mga0k408_452_c1 3300050493 Bacteria 22518
158 nmdc:mga06z11_51294_c1 3300050494 Bacteria 2112
159 nmdc:mga07m45_7634_c1 3300050496 Bacteria 5533
160 nmdc:mga0a205_54311_c1 3300050515 Bacteria 3867
161 Ga0500556_0000212 3300053104 Bacteria 47426
162 Ga0500618_010455 3300053125 Bacteria 2490
163 Ga0500658_0071054 3300053134 Bacteria 1469
164 Ga0500568_0021952 3300053139 Bacteria 2740
165 Ga0587124_000991 3300059660 Bacteria 1749
166 Ga0501082_0000068 3300060353 Bacteria 74428
167 2788434385 2786546940 Bacteria 6396474
168 2977236531 2977232053 Bacteria 5485925
169 Ga0307408_100040548
170 JGI25406J46586_10000587
171 Ga0058860_12034632
172 Ga0070658_10005434
173 Ga0070683_100233946
174 Ga0070690_100054022
175 Ga0070690_100084957
176 Ga0070670_100035449
177 Ga0070670_100043197
178 Ga0070666_10015185
179 Ga0068868_100004948
180 Ga0068868_100017385
181 Ga0070691_10048566
182 Ga0070661_100017147
183 Ga0070661_100088647
184 Ga0070688_100071853
185 Ga0070659_100013230
186 Ga0070667_100005779
187 Ga0070714_100093709
188 Ga0070663_100088343
189 Ga0070662_100025229
190 Ga0070662_100053208
191 Ga0070679_100048332
192 Ga0068853_100005891
193 Ga0068853_100041043
194 Ga0068853_100343384
195 Ga0070672_100140032
196 Ga0070665_100000615
197 Ga0070665_100223306
198 Ga0068855_100011194
199 Ga0068855_100037029
200 Ga0070664_100067571
201 Ga0070664_100092953
202 Ga0070664_100245182
203 Ga0068857_100012745
204 Ga0068854_100169023
205 Ga0068856_100169180
206 Ga0068859_100118427
207 Ga0068864_100016955
208 Ga0068851_10026479
209 Ga0068863_100081612
210 Ga0068858_100256726
211 Ga0081539_10000871
212 Ga0070717_10000243
213 Ga0075362_10025357
214 Ga0097621_100010880
215 Ga0075370_10041251
216 Ga0075433_10040179
217 Ga0097620_100118428
218 Ga0105240_10000532
219 Ga0111539_10164960
220 Ga0105242_10059512
221 Ga0105248_10010869
222 Ga0105248_10358572
223 Ga0105238_10253333
224 Ga0157373_10011436
225 Ga0157369_10094570
226 Ga0157369_10119472
227 Ga0157374_10029272
228 Ga0163162_10001292
229 Ga0163162_10001348
230 Ga0163162_10023378
231 Ga0157372_10054546
232 Ga0157372_10063148
233 Ga0157372_10159642
234 Ga0157372_10241765
235 Ga0157375_10026903
236 Ga0163163_10094382
237 Ga0163163_10222670
238 Ga0157379_10021469
239 Ga0157376_10001522
240 Ga0157376_10038187
241 Ga0213872_10040015
242 Ga0213872_10069417
243 Ga0213874_10021908
244 Ga0213876_10014047
245 Ga0213876_10017237
246 Ga0213876_10024460
247 Ga0207697_10004155
248 Ga0207705_10011579
249 Ga0207695_10000177
250 Ga0207652_10093102
251 Ga0207652_10325398
252 Ga0207694_10143583
253 Ga0207644_10097794
254 Ga0207686_10040544
255 Ga0207665_10021798
256 Ga0207691_10024295
257 Ga0207691_10165983
258 Ga0207711_10025184
259 Ga0207711_10101137
260 Ga0207679_10200924
261 Ga0207679_10239918
262 Ga0207667_10032901
263 Ga0207640_10166071
264 Ga0207677_10081712
265 Ga0207639_10054930
266 Ga0207639_10131098
267 Ga0207702_10115466
268 Ga0207641_10089393
269 Ga0207641_10183403
270 Ga0207674_10089891
271 Ga0207674_10367605
272 Ga0207683_10111481
273 Ga0268266_10000575
274 Ga0307513_10001943
275 Ga0307408_100065084
276 Ga0307405_10028337
277 Ga0307413_10006853
278 Ga0307413_10036849
279 Ga0307410_10087399
280 Ga0307410_10148267
281 Ga0307410_10173499
282 Ga0307407_10056358
283 Ga0307409_100037695
284 Ga0307409_100194430
285 Ga0307416_100072564
286 Ga0307416_100074333
287 Ga0307414_10028899
288 Ga0307411_10002348
289 Ga0307411_10027170
290 Ga0307411_10032849
291 Ga0307411_10160028
292 Ga0307415_100048263
293 Ga0307415_100128345
294 Ga0395905_0193497
295 Ga0436364_1185227
296 Ga0436364_1421774
297 Ga0395901_0456561
298 Ga0436365_0109684
299 Ga0436365_0429918
300 Ga0436365_0543491
301 Ga0436365_1206841
302 Ga0436365_1345967
303 Ga0436363_1643789
304 Ga0451853_0606358
305 Ga0451853_1981207
306 Ga0466966_0004735
307 Ga0466963_0002177
308 Ga0466957_0032699
309 Ga0466967_0000805
310 Ga0495668_0000102
311 Ga0501043_0041094
312 Ga0501046_0029020
313 Ga0501048_0037509
314 Ga0501070_0022350
315 Ga0501072_0146700
316 Ga0501075_0012940
317 Ga0501077_0000041
318 Ga0501221_012438
319 Ga0501080_0001083
320 Ga0501081_0042893
321 Ga0501044_0021643
322 Ga0501044_0067908
323 nmdc:mga03683_473_c2
324 nmdc:mga0k408_1596_c1
325 nmdc:mga0k408_452_c1
326 nmdc:mga06z11_51294_c1
327 nmdc:mga07m45_7634_c1
328 nmdc:mga0a205_54311_c1
329 Ga0500556_0000212
330 Ga0500618_010455
331 Ga0500658_0071054
332 Ga0500568_0021952
333 Ga0587124_000991
334 Ga0501082_0000068
335 2788434385
336 2977236531

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03275

GLF

UDP-galactopyranose mutase

163

359

0.98

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

22

90

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hdq-assembly1.cif.gz_A crystal structure of udp-galactopyranose mutase (oxidized form) in complex with substrate 0.9824 2 357
1aog-assembly1.cif.gz_B trypanosoma cruzi trypanothione reductase (oxidized form) 0.9589 1 34
3hdq-assembly1.cif.gz_A crystal structure of udp-galactopyranose mutase (oxidized form) in complex with substrate 0.9584 2 357
4rpg-assembly2.cif.gz_A crystal structure of micobacterium tuberculosis udp-galactopyranose mutase in complex with substrate udp-galp 0.9546 2 357
5vj7-assembly1.cif.gz_A ferredoxin nadp oxidoreductase (xfn) 0.953 2 39
ID Description Score Start End Superfamily
3he3A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9791 2 357 3.40.50.720
1ebdB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9715 3 37 3.50.50.60
af_P9WHH5_150_268_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.968 3 37 3.50.50.60
af_K8F7V7_1826_1944_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9617 3 39 3.50.50.60
af_M9NFH8_1768_1873_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9611 3 39 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7W1LEH1-F1-model_v4 NAD(P)-binding protein 1.001 1 81 GO:0005829
GO:0008767
GO:0050660
AF-A0A3N5LUL8-F1-model_v4 UDP-galactopyranose mutase 0.9972 1 101 GO:0005829
GO:0008767
GO:0050660
AF-A0A442ZW17-F1-model_v4 UDP-galactopyranose mutase 0.9964 1 91 GO:0005829
GO:0008767
GO:0050660
AF-A0A6J4HEW3-F1-model_v4 UDP-galactopyranose mutase (EC 5.4.99.9) 0.9939 1 108 GO:0005829
GO:0008767
GO:0050660
AF-A0A838H127-F1-model_v4 deleted 0.9936 242 357

Map