F252525

General Info

Members Datasets Scaffolds Average Seq Length
168 102 336 235

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10022553|Ga0105240_100225534
Length 258
Sequence VAAVTRAGQRRQAAHRPAEAVVALTEPAIVVSALRVVRGGRVALHDVDCEVAAGAVTGLLGPSGCGKTTLMRSLVGVQRVDGGSIRILGLPGGSPELRRRVGYMTQAPSVYGDLTVRENLRYFARVVNRLDRVAEVTALVDLGEHAHSLVRDLSGGERSRASLAVALLGAPDLLVLDEPTVGLDPLLRRELWATFHRLADAGAALLVSTHVMDEAERCDRLLLMREGRILAEGTPAELRGRATASTLEEAFVALTEAQ

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
60 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
61 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
62 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
63 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
64 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
65 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
66 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
67 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
68 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
69 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
70 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
71 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
72 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
75 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
76 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
77 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
78 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
83 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
84 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
87 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
88 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
89 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
93 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
94 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
95 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
96 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
97 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
98 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
99 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
100 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
101 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
102 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.02
Metatranscriptomes 1.19
Isolates 1.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.1
Nodule 0
Rhizoplane 4.76
Rhizosphere 80.95
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10022553 3300009093 Bacteria 8343
2 JGI24735J21928_10052762 3300002067 Bacteria 1173
3 Ga0070658_10008640 3300005327 Bacteria 8187
4 Ga0070658_10107033 3300005327 Bacteria 2314
5 Ga0070658_10125018 3300005327 Bacteria 2140
6 Ga0070683_100052142 3300005329 Bacteria 3789
7 Ga0070683_100060606 3300005329 Bacteria 3517
8 Ga0070683_100061185 3300005329 Bacteria 3501
9 Ga0070683_100096599 3300005329 Bacteria 2779
10 Ga0070683_100351597 3300005329 Bacteria 1403
11 Ga0070680_100011853 3300005336 Bacteria 6761
12 Ga0070682_100342887 3300005337 Bacteria 1111
13 Ga0070660_100053068 3300005339 Bacteria 3126
14 Ga0070660_100219232 3300005339 Bacteria 1546
15 Ga0070660_100510992 3300005339 Bacteria 1000
16 Ga0070661_100036992 3300005344 Bacteria 3550
17 Ga0070659_100227162 3300005366 Bacteria 1542
18 Ga0070711_100210300 3300005439 Bacteria 1506
19 Ga0070681_10013093 3300005458 Bacteria 8237
20 Ga0070681_10112354 3300005458 Bacteria 2664
21 Ga0070681_10122901 3300005458 Bacteria 2528
22 Ga0070681_10237530 3300005458 Bacteria 1736
23 Ga0070698_100000205 3300005471 Bacteria 56962
24 Ga0070684_100058432 3300005535 Bacteria 3371
25 Ga0068853_100381032 3300005539 Bacteria 1317
26 Ga0068855_100010750 3300005563 Bacteria 11047
27 Ga0068855_100079331 3300005563 Bacteria 3808
28 Ga0068855_100404939 3300005563 Bacteria 1495
29 Ga0068857_100004411 3300005577 Bacteria 11894
30 Ga0068857_100006596 3300005577 Bacteria 9966
31 Ga0068854_100184451 3300005578 Bacteria 1632
32 Ga0068856_100129039 3300005614 Bacteria 2532
33 Ga0068856_100483951 3300005614 Bacteria 1259
34 Ga0068852_100064196 3300005616 Bacteria 3200
35 Ga0068864_100229047 3300005618 Bacteria 1718
36 Ga0068860_100009354 3300005843 Bacteria 9737
37 Ga0075365_10027106 3300006038 Bacteria 3642
38 Ga0075365_10268755 3300006038 Bacteria 1199
39 Ga0075363_100005184 3300006048 Bacteria 5769
40 Ga0075363_100054593 3300006048 Bacteria 2138
41 Ga0075363_100079732 3300006048 Bacteria 1789
42 Ga0075364_10029511 3300006051 Bacteria 3517
43 Ga0075364_10131716 3300006051 Bacteria 1678
44 Ga0075362_10003848 3300006177 Bacteria 5327
45 Ga0075367_10043886 3300006178 Bacteria 2619
46 Ga0075370_10056094 3300006353 Bacteria 2238
47 Ga0075370_10056496 3300006353 Bacteria 2231
48 Ga0105240_10352968 3300009093 Bacteria 1668
49 Ga0114129_10406302 3300009147 Bacteria 1794
50 Ga0105237_10181997 3300009545 Bacteria 2102
51 Ga0105238_10035959 3300009551 Bacteria 5035
52 Ga0105238_10119331 3300009551 Bacteria 2617
53 Ga0105238_11094743 3300009551 Bacteria 819
54 Ga0105239_10111896 3300010375 Bacteria 3027
55 Ga0105239_10161226 3300010375 Bacteria 2505
56 Ga0157370_10012493 3300013104 Bacteria 8802
57 Ga0157369_10016203 3300013105 Bacteria 8389
58 Ga0157369_10169900 3300013105 Bacteria 2298
59 Ga0157374_10224187 3300013296 Bacteria 1845
60 Ga0157372_10023732 3300013307 Bacteria 6653
61 Ga0157372_10043207 3300013307 Bacteria 4989
62 Ga0206353_10520182 3300020082 Bacteria 1219
63 Ga0206353_11309115 3300020082 Bacteria 2634
64 Ga0207705_10165749 3300025909 Bacteria 1662
65 Ga0207707_10001522 3300025912 Bacteria 21382
66 Ga0207707_10155389 3300025912 Bacteria 2001
67 Ga0207707_10543946 3300025912 Bacteria 987
68 Ga0207671_10066892 3300025914 Bacteria 2675
69 Ga0207663_10178661 3300025916 Bacteria 1514
70 Ga0207660_10011223 3300025917 Bacteria 5828
71 Ga0207660_10042114 3300025917 Bacteria 3203
72 Ga0207657_10002332 3300025919 Bacteria 20576
73 Ga0207657_10207921 3300025919 Bacteria 1572
74 Ga0207649_10111216 3300025920 Bacteria 1830
75 Ga0207652_10003632 3300025921 Bacteria 12710
76 Ga0207652_10099665 3300025921 Bacteria 2564
77 Ga0207690_10051464 3300025932 Bacteria 2754
78 Ga0207690_10065467 3300025932 Bacteria 2486
79 Ga0207661_10043791 3300025944 Bacteria 3534
80 Ga0207661_10060154 3300025944 Bacteria 3064
81 Ga0207661_10088070 3300025944 Bacteria 2580
82 Ga0207661_10476258 3300025944 Bacteria 1139
83 Ga0207667_10251237 3300025949 Bacteria 1809
84 Ga0207667_10387157 3300025949 Bacteria 1424
85 Ga0207640_10039125 3300025981 Bacteria 2999
86 Ga0207640_10147347 3300025981 Bacteria 1724
87 Ga0207678_10059285 3300026067 Bacteria 3294
88 Ga0207702_10074318 3300026078 Bacteria 2933
89 Ga0207702_10304274 3300026078 Bacteria 1514
90 Ga0207674_10004923 3300026116 Bacteria 15969
91 Ga0207674_10007576 3300026116 Bacteria 12650
92 Ga0268264_10000238 3300028381 Bacteria 105229
93 Ga0307413_10209388 3300031824 Bacteria 1415
94 Ga0307409_100212600 3300031995 Bacteria 1739
95 Ga0307416_100413020 3300032002 Bacteria 1391
96 Ga0395900_0812448 3300037418 Bacteria 862
97 Ga0395898_0163335 3300037466 Bacteria 2130
98 Ga0395898_0605186 3300037466 Bacteria 1039
99 Ga0395905_0085861 3300037471 Bacteria 2949
100 Ga0395905_0317155 3300037471 Bacteria 1448
101 Ga0395901_0115523 3300038443 Bacteria 2819
102 Ga0439438_048329 3300041405 Bacteria 1089
103 Ga0439461_0014357 3300041410 Bacteria 1506
104 Ga0439431_0001105 3300041997 Bacteria 5849
105 Ga0439448_0050502 3300042005 Bacteria 1361
106 Ga0450907_003565 3300042146 Bacteria 2769
107 Ga0439446_0007384 3300042156 Bacteria 2887
108 Ga0466972_0024863 3300044658 Bacteria 2972
109 Ga0466965_0017826 3300044683 Bacteria 3396
110 Ga0466965_0036108 3300044683 Bacteria 2424
111 Ga0466963_0360031 3300044694 Bacteria 1025
112 Ga0466964_0004350 3300044706 Bacteria 5221
113 Ga0466970_0072947 3300044765 Bacteria 1847
114 Ga0466957_0150563 3300044842 Bacteria 1504
115 Ga0466960_0062155 3300044901 Bacteria 1835
116 Ga0466960_0114991 3300044901 Bacteria 1402
117 Ga0466967_0200478 3300045976 Bacteria 1890
118 Ga0466967_0311189 3300045976 Bacteria 1517
119 Ga0496101_0275268 3300048904 Bacteria 1315
120 Ga0496105_0088907 3300048908 Bacteria 2552
121 Ga0496105_0449815 3300048908 Bacteria 1017
122 Ga0496111_0038621 3300048914 Bacteria 3421
123 Ga0496111_0534190 3300048914 Bacteria 862
124 Ga0496114_0167546 3300048917 Bacteria 1913
125 Ga0496114_0272343 3300048917 Bacteria 1492
126 Ga0496114_0381368 3300048917 Bacteria 1248
127 Ga0501031_0063609 3300049568 Bacteria 2403
128 Ga0501036_0102824 3300049572 Bacteria 2417
129 Ga0501036_0612015 3300049572 Bacteria 903
130 Ga0501039_0118033 3300049575 Bacteria 2078
131 Ga0501047_0479083 3300049581 Bacteria 1072
132 Ga0501067_0002783 3300049583 Bacteria 9618
133 Ga0501067_0056536 3300049583 Bacteria 2173
134 Ga0501067_0098499 3300049583 Bacteria 1624
135 Ga0501068_0070188 3300049584 Bacteria 2137
136 Ga0501069_0001231 3300049585 Bacteria 12514
137 Ga0501069_0078360 3300049585 Bacteria 1858
138 Ga0501070_0003113 3300049586 Bacteria 14450
139 Ga0501070_0011192 3300049586 Bacteria 7574
140 Ga0501070_0020815 3300049586 Bacteria 5503
141 Ga0501070_0455277 3300049586 Bacteria 1031
142 Ga0501070_0523489 3300049586 Bacteria 951
143 Ga0501070_0545530 3300049586 Bacteria 928
144 Ga0501074_0317342 3300049590 Bacteria 1107
145 Ga0501076_0382597 3300049592 Bacteria 1157
146 Ga0501077_0116066 3300049593 Bacteria 1697
147 Ga0501080_0001119 3300049742 Bacteria 22084
148 Ga0501080_0944466 3300049742 Bacteria 750
149 Ga0501035_0217513 3300049822 Bacteria 1632
150 Ga0501044_0045177 3300049823 Bacteria 4566
151 Ga0501044_0268333 3300049823 Bacteria 1643
152 Ga0501045_0025260 3300049824 Bacteria 4270
153 nmdc:mga03n38_11960_c1 3300050490 Bacteria 3250
154 nmdc:mga03n38_191752_c1 3300050490 Bacteria 1053
155 nmdc:mga0yw44_352226_c1 3300050492 Bacteria 991
156 nmdc:mga0yw44_427124_c1 3300050492 Bacteria 897
157 nmdc:mga0yw44_432008_c1 3300050492 Bacteria 892
158 nmdc:mga0yw44_476336_c1 3300050492 Bacteria 847
159 nmdc:mga0yw44_6964_c1 3300050492 Bacteria 5520
160 nmdc:mga06z11_69451_c1 3300050494 Bacteria 1860
161 nmdc:mga06z11_84951_c1 3300050494 Bacteria 1707
162 nmdc:mga07m45_8088_c1 3300050496 Bacteria 5393
163 Ga0500644_0000100 3300053088 Bacteria 54794
164 Ga0501082_0261069 3300060353 Bacteria 1507
165 Ga0466962_0060961 3300061719 Bacteria 1801
166 2812334901 2811994874 Bacteria 5367947
167 2837268869 2837268691 Bacteria 7850704
168 2855388079 2855386786 Bacteria 4752232
169 Ga0105240_10022553
170 JGI24735J21928_10052762
171 Ga0070658_10008640
172 Ga0070658_10107033
173 Ga0070658_10125018
174 Ga0070683_100052142
175 Ga0070683_100060606
176 Ga0070683_100061185
177 Ga0070683_100096599
178 Ga0070683_100351597
179 Ga0070680_100011853
180 Ga0070682_100342887
181 Ga0070660_100053068
182 Ga0070660_100219232
183 Ga0070660_100510992
184 Ga0070661_100036992
185 Ga0070659_100227162
186 Ga0070711_100210300
187 Ga0070681_10013093
188 Ga0070681_10112354
189 Ga0070681_10122901
190 Ga0070681_10237530
191 Ga0070698_100000205
192 Ga0070684_100058432
193 Ga0068853_100381032
194 Ga0068855_100010750
195 Ga0068855_100079331
196 Ga0068855_100404939
197 Ga0068857_100004411
198 Ga0068857_100006596
199 Ga0068854_100184451
200 Ga0068856_100129039
201 Ga0068856_100483951
202 Ga0068852_100064196
203 Ga0068864_100229047
204 Ga0068860_100009354
205 Ga0075365_10027106
206 Ga0075365_10268755
207 Ga0075363_100005184
208 Ga0075363_100054593
209 Ga0075363_100079732
210 Ga0075364_10029511
211 Ga0075364_10131716
212 Ga0075362_10003848
213 Ga0075367_10043886
214 Ga0075370_10056094
215 Ga0075370_10056496
216 Ga0105240_10352968
217 Ga0114129_10406302
218 Ga0105237_10181997
219 Ga0105238_10035959
220 Ga0105238_10119331
221 Ga0105238_11094743
222 Ga0105239_10111896
223 Ga0105239_10161226
224 Ga0157370_10012493
225 Ga0157369_10016203
226 Ga0157369_10169900
227 Ga0157374_10224187
228 Ga0157372_10023732
229 Ga0157372_10043207
230 Ga0206353_10520182
231 Ga0206353_11309115
232 Ga0207705_10165749
233 Ga0207707_10001522
234 Ga0207707_10155389
235 Ga0207707_10543946
236 Ga0207671_10066892
237 Ga0207663_10178661
238 Ga0207660_10011223
239 Ga0207660_10042114
240 Ga0207657_10002332
241 Ga0207657_10207921
242 Ga0207649_10111216
243 Ga0207652_10003632
244 Ga0207652_10099665
245 Ga0207690_10051464
246 Ga0207690_10065467
247 Ga0207661_10043791
248 Ga0207661_10060154
249 Ga0207661_10088070
250 Ga0207661_10476258
251 Ga0207667_10251237
252 Ga0207667_10387157
253 Ga0207640_10039125
254 Ga0207640_10147347
255 Ga0207678_10059285
256 Ga0207702_10074318
257 Ga0207702_10304274
258 Ga0207674_10004923
259 Ga0207674_10007576
260 Ga0268264_10000238
261 Ga0307413_10209388
262 Ga0307409_100212600
263 Ga0307416_100413020
264 Ga0395900_0812448
265 Ga0395898_0163335
266 Ga0395898_0605186
267 Ga0395905_0085861
268 Ga0395905_0317155
269 Ga0395901_0115523
270 Ga0439438_048329
271 Ga0439461_0014357
272 Ga0439431_0001105
273 Ga0439448_0050502
274 Ga0450907_003565
275 Ga0439446_0007384
276 Ga0466972_0024863
277 Ga0466965_0017826
278 Ga0466965_0036108
279 Ga0466963_0360031
280 Ga0466964_0004350
281 Ga0466970_0072947
282 Ga0466957_0150563
283 Ga0466960_0062155
284 Ga0466960_0114991
285 Ga0466967_0200478
286 Ga0466967_0311189
287 Ga0496101_0275268
288 Ga0496105_0088907
289 Ga0496105_0449815
290 Ga0496111_0038621
291 Ga0496111_0534190
292 Ga0496114_0167546
293 Ga0496114_0272343
294 Ga0496114_0381368
295 Ga0501031_0063609
296 Ga0501036_0102824
297 Ga0501036_0612015
298 Ga0501039_0118033
299 Ga0501047_0479083
300 Ga0501067_0002783
301 Ga0501067_0056536
302 Ga0501067_0098499
303 Ga0501068_0070188
304 Ga0501069_0001231
305 Ga0501069_0078360
306 Ga0501070_0003113
307 Ga0501070_0011192
308 Ga0501070_0020815
309 Ga0501070_0455277
310 Ga0501070_0523489
311 Ga0501070_0545530
312 Ga0501074_0317342
313 Ga0501076_0382597
314 Ga0501077_0116066
315 Ga0501080_0001119
316 Ga0501080_0944466
317 Ga0501035_0217513
318 Ga0501044_0045177
319 Ga0501044_0268333
320 Ga0501045_0025260
321 nmdc:mga03n38_11960_c1
322 nmdc:mga03n38_191752_c1
323 nmdc:mga0yw44_352226_c1
324 nmdc:mga0yw44_427124_c1
325 nmdc:mga0yw44_432008_c1
326 nmdc:mga0yw44_476336_c1
327 nmdc:mga0yw44_6964_c1
328 nmdc:mga06z11_69451_c1
329 nmdc:mga06z11_84951_c1
330 nmdc:mga07m45_8088_c1
331 Ga0500644_0000100
332 Ga0501082_0261069
333 Ga0466962_0060961
334 2812334901
335 2837268869
336 2855388079

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

44

181

0.96

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

128

211

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4yer-assembly1.cif.gz_A crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9609 2 215
4yer-assembly1.cif.gz_B crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9603 2 214
1vpl-assembly1.cif.gz_A-2 crystal structure of abc transporter atp-binding protein (tm0544) from thermotoga maritima at 2.10 a resolution 0.9491 2 228
6z4w-assembly1.cif.gz_A ftse structure from streptococcus pneumoniae in complex with adp (space group p 1) 0.9402 2 207
7osf-assembly1.cif.gz_B abc transporter complex nosdfyl, r-domain 1 0.9331 2 214
ID Description Score Start End Superfamily
af_O33189_10_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9839 2 229 3.40.50.300
af_O33189_10_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9671 2 229 3.40.50.300
af_P0A9U1_1_234_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9587 2 216 3.40.50.300
af_P9WQL9_1_244_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9576 2 214 3.40.50.300
af_P37624_268_530_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9559 2 231 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1I4ICJ2-F1-model_v4 ABC-2 type transport system ATP-binding protein 0.9971 2 229 GO:0005524
GO:0016887
AF-A0A5C8UT83-F1-model_v4 ABC transporter ATP-binding protein 0.9968 2 231 GO:0005524
GO:0016887
AF-A0A0T2IFA2-F1-model_v4 Multidrug ABC transporter ATP-binding protein 0.9965 2 229 GO:0005524
GO:0016887
AF-A0A4R8WDZ3-F1-model_v4 ABC transporter ATP-binding protein 0.9955 2 229 GO:0005524
GO:0016887
AF-A0A542ZN15-F1-model_v4 ABC-2 type transport system ATP-binding protein 0.9953 2 230 GO:0005524
GO:0016887

Map