F252521

General Info

Members Datasets Scaffolds Average Seq Length
168 106 336 308

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10004355|Ga0105240_100043553
Length 339
Sequence MQVIFSISKLHIINDPSMSTILITGGTGLIGTALSQMLISKGHSVILLSRGSATAAPNGIHSPDADKLSITHWDPYKNIIDGDAIRSADFIVHLAGAGVADKRWTARRKKEIVESRTLSSALLVKALKEIPNKVQAVISASGIGWYGPDPAIPNPRPFVETDPVDEDFLGETCRLWEESIRPVEALGKRLVILRTGLVLSNEGGALTEFKKPVKLGVAAILGSGRQVMSWIHIEDQCRLFLHAIEDASWSGVYNAVAPQPVNNRALTLELARRMKGRYFVPVYIPSLFLKIAVGGLSIEVLKSATVSDEKVHKGGFQFLYPSIQSALDNLTGRPLQNAG

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
77 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
80 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
81 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
82 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
83 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
84 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
93 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
96 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
97 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
98 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
101 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
102 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
103 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
104 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
105 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
106 2818991444 Filimonas endophytica 3197 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.4
Metatranscriptomes 0
Isolates 0.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.38
Nodule 0
Rhizoplane 0.6
Rhizosphere 89.29
Stem 0
Stem Tuber 0
Unclassified 7.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10004355 3300009093 Bacteria 21610
2 rootH1_10082668 3300003316 Bacteria 3119
3 rootH1_10122814 3300003316 Unclassified 2459
4 rootH2_10028542 3300003320 Bacteria 6053
5 rootH2_10179675 3300003320 Bacteria 1169
6 rootL2_10073002 3300003322 Bacteria 6487
7 rootL2_10231063 3300003322 Bacteria 4813
8 rootH1_10270753 3300003323 Bacteria 1085
9 Ga0065715_10228659 3300005293 Bacteria 1242
10 Ga0070658_10036049 3300005327 Bacteria 3985
11 Ga0070676_10041269 3300005328 Bacteria 2675
12 Ga0070680_100071933 3300005336 Bacteria 2842
13 Ga0068868_100096331 3300005338 Unclassified 2390
14 Ga0070691_10009154 3300005341 Bacteria 4527
15 Ga0070667_100125020 3300005367 Bacteria 2241
16 Ga0070663_100008758 3300005455 Bacteria 6239
17 Ga0070663_100262738 3300005455 Unclassified 1370
18 Ga0070678_100037282 3300005456 Bacteria 3412
19 Ga0070681_10003835 3300005458 Bacteria 14134
20 Ga0070681_10414407 3300005458 Unclassified 1259
21 Ga0068867_100101006 3300005459 Bacteria 2203
22 Ga0070679_100102887 3300005530 Bacteria 2842
23 Ga0068853_100009931 3300005539 Bacteria 7684
24 Ga0068853_100174707 3300005539 Bacteria 1945
25 Ga0068853_100349047 3300005539 Bacteria 1376
26 Ga0070665_100000018 3300005548 Bacteria 434118
27 Ga0068855_100001486 3300005563 Bacteria 29324
28 Ga0068855_100028394 3300005563 Bacteria 6693
29 Ga0068855_100045574 3300005563 Bacteria 5187
30 Ga0068855_100744277 3300005563 Bacteria 1046
31 Ga0068857_100553011 3300005577 Bacteria 1084
32 Ga0068856_100012182 3300005614 Bacteria 8332
33 Ga0068856_100065592 3300005614 Bacteria 3588
34 Ga0068852_100001839 3300005616 Bacteria 14424
35 Ga0068852_100166708 3300005616 Bacteria 2061
36 Ga0068859_100002894 3300005617 Bacteria 17442
37 Ga0068859_100156461 3300005617 Bacteria 2357
38 Ga0068861_100153103 3300005719 Bacteria 1894
39 Ga0068863_100146450 3300005841 Bacteria 2259
40 Ga0068863_100171187 3300005841 Bacteria 2083
41 Ga0068860_100000252 3300005843 Bacteria 79891
42 Ga0068860_100082478 3300005843 Bacteria 3058
43 Ga0081539_10013077 3300005985 Bacteria 6292
44 Ga0097621_100002207 3300006237 Bacteria 13328
45 Ga0097621_100075803 3300006237 Bacteria 2789
46 Ga0068871_100002671 3300006358 Bacteria 12169
47 Ga0068871_100049656 3300006358 Unclassified 3392
48 Ga0068865_100100861 3300006881 Bacteria 2113
49 Ga0097620_100002894 3300006931 Bacteria 17442
50 Ga0105240_10000431 3300009093 Bacteria 77497
51 Ga0105240_10003449 3300009093 Bacteria 24537
52 Ga0105240_10003572 3300009093 Bacteria 24125
53 Ga0105240_10167218 3300009093 Bacteria 2607
54 Ga0105240_10229814 3300009093 Bacteria 2157
55 Ga0105237_10002049 3300009545 Bacteria 25638
56 Ga0105237_10008649 3300009545 Bacteria 11000
57 Ga0105237_10008742 3300009545 Bacteria 10931
58 Ga0105237_10013691 3300009545 Bacteria 8495
59 Ga0105237_10016345 3300009545 Bacteria 7713
60 Ga0105238_10001088 3300009551 Bacteria 27427
61 Ga0105238_10058339 3300009551 Bacteria 3869
62 Ga0105239_10001881 3300010375 Bacteria 27435
63 Ga0105239_10002232 3300010375 Bacteria 24792
64 Ga0105239_10018517 3300010375 Bacteria 7692
65 Ga0105239_10046801 3300010375 Bacteria 4740
66 Ga0105239_10231636 3300010375 Bacteria 2072
67 Ga0105246_10235499 3300011119 Bacteria 1444
68 Ga0105246_10267557 3300011119 Unclassified 1365
69 Ga0157371_10017769 3300013102 Bacteria 5276
70 Ga0157370_10001018 3300013104 Bacteria 35308
71 Ga0157370_10433955 3300013104 Bacteria 1208
72 Ga0157369_10034610 3300013105 Bacteria 5541
73 Ga0157378_10107211 3300013297 Bacteria 2556
74 Ga0157378_10351543 3300013297 Bacteria 1440
75 Ga0163162_10000410 3300013306 Bacteria 39376
76 Ga0163162_10055241 3300013306 Bacteria 3997
77 Ga0163162_10128764 3300013306 Bacteria 2639
78 Ga0157372_10000294 3300013307 Bacteria 55599
79 Ga0157372_10049258 3300013307 Bacteria 4684
80 Ga0157372_10072979 3300013307 Bacteria 3868
81 Ga0157372_10086258 3300013307 Bacteria 3562
82 Ga0157375_10076248 3300013308 Bacteria 3379
83 Ga0163163_10398152 3300014325 Unclassified 1435
84 Ga0157379_10019079 3300014968 Bacteria 6055
85 Ga0157376_10002082 3300014969 Bacteria 13454
86 Ga0207680_10153569 3300025903 Unclassified 1537
87 Ga0207647_10026265 3300025904 Bacteria 3812
88 Ga0207645_10038866 3300025907 Bacteria 3049
89 Ga0207705_10008007 3300025909 Bacteria 7749
90 Ga0207707_10005233 3300025912 Bacteria 11374
91 Ga0207695_10001411 3300025913 Bacteria 40483
92 Ga0207695_10001469 3300025913 Bacteria 39469
93 Ga0207695_10003026 3300025913 Bacteria 24133
94 Ga0207695_10024063 3300025913 Bacteria 6865
95 Ga0207695_10037075 3300025913 Bacteria 5263
96 Ga0207695_10065008 3300025913 Bacteria 3752
97 Ga0207695_10148484 3300025913 Bacteria 2285
98 Ga0207671_10005099 3300025914 Bacteria 12253
99 Ga0207671_10020236 3300025914 Bacteria 5070
100 Ga0207671_10069740 3300025914 Bacteria 2620
101 Ga0207671_10133598 3300025914 Unclassified 1906
102 Ga0207660_10024965 3300025917 Bacteria 4052
103 Ga0207657_10042296 3300025919 Bacteria 4022
104 Ga0207652_10000018 3300025921 Bacteria 187527
105 Ga0207694_10004801 3300025924 Bacteria 10488
106 Ga0207694_10051864 3300025924 Bacteria 3179
107 Ga0207704_10409606 3300025938 Bacteria 1072
108 Ga0207691_10294404 3300025940 Bacteria 1395
109 Ga0207689_10271696 3300025942 Bacteria 1404
110 Ga0207661_10094312 3300025944 Bacteria 2500
111 Ga0207667_10000403 3300025949 Bacteria 58481
112 Ga0207667_10008310 3300025949 Bacteria 12349
113 Ga0207667_10027292 3300025949 Bacteria 6217
114 Ga0207667_10321761 3300025949 Bacteria 1580
115 Ga0207640_10005850 3300025981 Bacteria 6709
116 Ga0207677_10034570 3300026023 Unclassified 3274
117 Ga0207639_10003069 3300026041 Bacteria 11236
118 Ga0207639_10045853 3300026041 Bacteria 3295
119 Ga0207639_10151307 3300026041 Bacteria 1944
120 Ga0207678_10017418 3300026067 Bacteria 6310
121 Ga0207702_10075410 3300026078 Bacteria 2914
122 Ga0207702_10171425 3300026078 Bacteria 1990
123 Ga0207641_10059494 3300026088 Bacteria 3254
124 Ga0207648_10020589 3300026089 Bacteria 5938
125 Ga0207648_10075978 3300026089 Bacteria 2928
126 Ga0207674_10000600 3300026116 Bacteria 47324
127 Ga0207675_100394796 3300026118 Bacteria 1362
128 Ga0207683_10029078 3300026121 Bacteria 4783
129 Ga0207683_10241897 3300026121 Bacteria 1646
130 Ga0207698_10100279 3300026142 Bacteria 2398
131 Ga0268266_10000026 3300028379 Bacteria 434485
132 Ga0268264_10000015 3300028381 Bacteria 508501
133 Ga0268264_10000019 3300028381 Bacteria 488112
134 Ga0268264_10000054 3300028381 Bacteria 317048
135 Ga0268264_10012139 3300028381 Bacteria 7092
136 Ga0307517_10001171 3300028786 Bacteria 44114
137 Ga0307511_10123480 3300030521 Bacteria 1589
138 Ga0265327_10000511 3300031251 Bacteria 67370
139 Ga0307513_10017117 3300031456 Bacteria 8707
140 Ga0316576_10077599 3300031727 Bacteria 2460
141 Ga0316578_10011816 3300031728 Bacteria 4584
142 Ga0307516_10024454 3300031730 Bacteria 6169
143 Ga0307507_10046310 3300033179 Bacteria 4265
144 Ga0316584_0079348 3300036712 Bacteria 2459
145 Ga0395899_0049045 3300037312 Bacteria 3139
146 Ga0395900_0023610 3300037418 Bacteria 6292
147 Ga0395900_0062349 3300037418 Bacteria 3832
148 Ga0395898_0009414 3300037466 Bacteria 10259
149 Ga0395901_0322771 3300038443 Bacteria 1597
150 Ga0466972_0003046 3300044658 Bacteria 8316
151 Ga0466965_0037659 3300044683 Bacteria 2375
152 Ga0453684_0022289 3300044712 Bacteria 9405
153 Ga0466968_0055846 3300044735 Bacteria 1695
154 Ga0466970_0116583 3300044765 Bacteria 1461
155 Ga0451576_0012173 3300045051 Bacteria 9698
156 Ga0495638_0086058 3300046460 Bacteria 1900
157 Ga0495648_0001051 3300046524 Bacteria 28002
158 Ga0495648_0096368 3300046524 Unclassified 1644
159 Ga0495611_0000458 3300046648 Bacteria 24452
160 Ga0495687_000031 3300047443 Bacteria 274659
161 Ga0495686_0000128 3300047472 Bacteria 156223
162 Ga0496115_0084770 3300048918 Bacteria 2584
163 Ga0501284_00810 3300050005 Bacteria 1617
164 Ga0500583_0042243 3300053092 Unclassified 2076
165 Ga0500616_0132250 3300053153 Unclassified 1177
166 Ga0500622_0004849 3300053156 Bacteria 8249
167 Ga0500645_037124 3300053730 Bacteria 1448
168 2819589907 2818991444 Bacteria 6968812
169 Ga0105240_10004355
170 rootH1_10082668
171 rootH1_10122814
172 rootH2_10028542
173 rootH2_10179675
174 rootL2_10073002
175 rootL2_10231063
176 rootH1_10270753
177 Ga0065715_10228659
178 Ga0070658_10036049
179 Ga0070676_10041269
180 Ga0070680_100071933
181 Ga0068868_100096331
182 Ga0070691_10009154
183 Ga0070667_100125020
184 Ga0070663_100008758
185 Ga0070663_100262738
186 Ga0070678_100037282
187 Ga0070681_10003835
188 Ga0070681_10414407
189 Ga0068867_100101006
190 Ga0070679_100102887
191 Ga0068853_100009931
192 Ga0068853_100174707
193 Ga0068853_100349047
194 Ga0070665_100000018
195 Ga0068855_100001486
196 Ga0068855_100028394
197 Ga0068855_100045574
198 Ga0068855_100744277
199 Ga0068857_100553011
200 Ga0068856_100012182
201 Ga0068856_100065592
202 Ga0068852_100001839
203 Ga0068852_100166708
204 Ga0068859_100002894
205 Ga0068859_100156461
206 Ga0068861_100153103
207 Ga0068863_100146450
208 Ga0068863_100171187
209 Ga0068860_100000252
210 Ga0068860_100082478
211 Ga0081539_10013077
212 Ga0097621_100002207
213 Ga0097621_100075803
214 Ga0068871_100002671
215 Ga0068871_100049656
216 Ga0068865_100100861
217 Ga0097620_100002894
218 Ga0105240_10000431
219 Ga0105240_10003449
220 Ga0105240_10003572
221 Ga0105240_10167218
222 Ga0105240_10229814
223 Ga0105237_10002049
224 Ga0105237_10008649
225 Ga0105237_10008742
226 Ga0105237_10013691
227 Ga0105237_10016345
228 Ga0105238_10001088
229 Ga0105238_10058339
230 Ga0105239_10001881
231 Ga0105239_10002232
232 Ga0105239_10018517
233 Ga0105239_10046801
234 Ga0105239_10231636
235 Ga0105246_10235499
236 Ga0105246_10267557
237 Ga0157371_10017769
238 Ga0157370_10001018
239 Ga0157370_10433955
240 Ga0157369_10034610
241 Ga0157378_10107211
242 Ga0157378_10351543
243 Ga0163162_10000410
244 Ga0163162_10055241
245 Ga0163162_10128764
246 Ga0157372_10000294
247 Ga0157372_10049258
248 Ga0157372_10072979
249 Ga0157372_10086258
250 Ga0157375_10076248
251 Ga0163163_10398152
252 Ga0157379_10019079
253 Ga0157376_10002082
254 Ga0207680_10153569
255 Ga0207647_10026265
256 Ga0207645_10038866
257 Ga0207705_10008007
258 Ga0207707_10005233
259 Ga0207695_10001411
260 Ga0207695_10001469
261 Ga0207695_10003026
262 Ga0207695_10024063
263 Ga0207695_10037075
264 Ga0207695_10065008
265 Ga0207695_10148484
266 Ga0207671_10005099
267 Ga0207671_10020236
268 Ga0207671_10069740
269 Ga0207671_10133598
270 Ga0207660_10024965
271 Ga0207657_10042296
272 Ga0207652_10000018
273 Ga0207694_10004801
274 Ga0207694_10051864
275 Ga0207704_10409606
276 Ga0207691_10294404
277 Ga0207689_10271696
278 Ga0207661_10094312
279 Ga0207667_10000403
280 Ga0207667_10008310
281 Ga0207667_10027292
282 Ga0207667_10321761
283 Ga0207640_10005850
284 Ga0207677_10034570
285 Ga0207639_10003069
286 Ga0207639_10045853
287 Ga0207639_10151307
288 Ga0207678_10017418
289 Ga0207702_10075410
290 Ga0207702_10171425
291 Ga0207641_10059494
292 Ga0207648_10020589
293 Ga0207648_10075978
294 Ga0207674_10000600
295 Ga0207675_100394796
296 Ga0207683_10029078
297 Ga0207683_10241897
298 Ga0207698_10100279
299 Ga0268266_10000026
300 Ga0268264_10000015
301 Ga0268264_10000019
302 Ga0268264_10000054
303 Ga0268264_10012139
304 Ga0307517_10001171
305 Ga0307511_10123480
306 Ga0265327_10000511
307 Ga0307513_10017117
308 Ga0316576_10077599
309 Ga0316578_10011816
310 Ga0307516_10024454
311 Ga0307507_10046310
312 Ga0316584_0079348
313 Ga0395899_0049045
314 Ga0395900_0023610
315 Ga0395900_0062349
316 Ga0395898_0009414
317 Ga0395901_0322771
318 Ga0466972_0003046
319 Ga0466965_0037659
320 Ga0453684_0022289
321 Ga0466968_0055846
322 Ga0466970_0116583
323 Ga0451576_0012173
324 Ga0495638_0086058
325 Ga0495648_0001051
326 Ga0495648_0096368
327 Ga0495611_0000458
328 Ga0495687_000031
329 Ga0495686_0000128
330 Ga0496115_0084770
331 Ga0501284_00810
332 Ga0500583_0042243
333 Ga0500616_0132250
334 Ga0500622_0004849
335 Ga0500645_037124
336 2819589907

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08338

DUF1731

Domain of unknown function (DUF1731)

284

330

0.97

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

21

255

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4b4o-assembly6.cif.gz_F crystal structure of human epimerase family protein sdr39u1 (isoform2) with nadph 0.9231 3 303
4b4o-assembly6.cif.gz_F crystal structure of human epimerase family protein sdr39u1 (isoform2) with nadph 0.9081 3 303
3oh8-assembly1.cif.gz_A crystal structure of the nucleoside-diphosphate sugar epimerase from corynebacterium glutamicum. northeast structural genomics consortium target cgr91 0.8999 2 303
3m2p-assembly1.cif.gz_A the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8528 1 303
3m2p-assembly3.cif.gz_E the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8459 1 303
ID Description Score Start End Superfamily
af_P9WGP7_2_287_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9517 2 292 3.40.50.720
af_P9WGP7_2_287_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9388 2 292 3.40.50.720
af_Q54W18_55_395_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9271 4 301 3.40.50.720
af_Q869N3_132_238_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9262 2 34 3.90.180.10
af_Q2G035_4_300_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9179 5 304 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A5B8VBF3-F1-model_v4 TIGR01777 family protein 0.9783 1 304
AF-A0A4P5TTS0-F1-model_v4 NAD-dependent epimerase 0.9759 1 302
AF-A0A5B8VBF3-F1-model_v4 TIGR01777 family protein 0.9751 1 304
AF-A0A522SXK2-F1-model_v4 TIGR01777 family protein 0.973 1 303
AF-A0A4Q3BKD4-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.97 1 118

Map