F252485

General Info

Members Datasets Scaffolds Average Seq Length
168 149 332 543

Family's Representative Sequence

Representative Sequence 3300006942|Ga0099824_1013404|Ga0099824_10134047
Length 601
Sequence MESPSTPDRPRSRISATADPGSGDQQTGRALLNGKVALPLADLVYLPNPKVPMMPPGRSTQIRLQERVANALRQIEALESAYETTTIGQLVERRARTHGSTIAIDVFDRGERATYSEMDRWSNKYAHALRAFGVSKGDRIGVMLPNRIEFPILWFAMAKLGAVTVPINMRYTPREIEYVLSDTQAKFAVIDESVWSVFSEMDPWPEDLATERAIRVGEDSDGTASLDELLKGVDDSPIDEEIRPDDLLNIQYTSGTTGFPKGCMLTHDHWGVFSYQATCWEKPYQRYLSAQPFFYIDPPGHLLKSYRQGGTLYLAPQLSSTRFISWVKQHRIEWCQVPELMARRAEAVDEDGTTCLKQTLNWGWSPDTVRQFRRRFRVPTQDAYGMTEIGFGTRMSNELDELAYSGSVGIRAPFRELQLMNEDGSPTTVGDVGELWVSGRGILKGYWNKPEANAGLFEGEWFKTGDLMRRDELGFYWLVGRTKDMIRRSSENIAAREVEAVIREILEIVDVAALPVSDLKRGEEVKICVELREGNTPDSQTVARILEHARAHLAVFKVPRYIAFTPTLPRATTSNKVLKRELMAVSDPLAGAYDAEEKRWR

Samples

Sample ID Description Type Environment
1 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
4 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
5 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
6 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
7 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
10 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
11 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
12 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
13 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
15 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
16 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
17 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
18 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
19 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
20 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
21 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
22 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
25 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
26 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
27 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
28 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
30 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
31 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
32 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
33 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
34 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
35 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
36 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
37 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
38 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
39 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
40 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
41 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
42 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
43 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
44 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
45 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
46 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
47 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
48 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
49 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
50 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
51 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
52 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
53 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
54 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
55 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
57 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
64 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
65 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
66 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
67 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
68 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
69 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
70 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
71 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
72 2507262055 Bradyrhizobium sp. WSM1417 Isolate Nodule
73 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
74 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
75 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
76 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
77 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
78 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
79 2643221733 Bosea sp. Root381 Isolate Unclassified
80 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
81 2818991435 Caulobacter henricii 536 Isolate Unclassified
82 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
83 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
84 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
85 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
86 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
87 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
88 2842038055 Bradyrhizobium centrosematis SEMIA 424 Isolate Nodule
89 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
90 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
91 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
92 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
93 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
94 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
95 2879127579 Bradyrhizobium canariense UBMA052 Isolate Nodule
96 2879142872 Bradyrhizobium canariense UBMA061 Isolate Nodule
97 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
98 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
99 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
100 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
101 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
102 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
103 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
104 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
105 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
106 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
107 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
108 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
109 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
110 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
111 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
112 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
113 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
114 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
115 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
116 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
117 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
118 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
119 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
120 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
121 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
122 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
123 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
124 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
125 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
126 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
127 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
128 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
129 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
130 641522639 Methylobacterium sp. 4-46 Isolate Nodule
131 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
132 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
133 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
134 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
135 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
136 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
137 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
138 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
139 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
140 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
141 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
142 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
143 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
144 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
145 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
146 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
147 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
148 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule
149 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 51.79
Metatranscriptomes 0
Isolates 48.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.57
Nodule 53.57
Rhizoplane 0
Rhizosphere 32.74
Stem 0
Stem Tuber 0
Unclassified 2.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099824_1013404 3300006942 Bacteria 8528
2 Ga0070683_100045152 3300005329 Bacteria 4067
3 Ga0070662_100068154 3300005457 Bacteria 2615
4 Ga0070672_100028313 3300005543 Bacteria 4190
5 Ga0068863_100087130 3300005841 Bacteria 2958
6 Ga0068858_100065228 3300005842 Bacteria 3369
7 Ga0068860_100087676 3300005843 Bacteria 2963
8 Ga0081455_10000065 3300005937 Bacteria 115239
9 Ga0081539_10000045 3300005985 Bacteria 277027
10 Ga0099824_1020514 3300006942 Bacteria 4843
11 Ga0099822_1027592 3300006943 Bacteria 4650
12 Ga0099822_1042970 3300006943 Bacteria 2324
13 Ga0099823_1000731 3300006944 Bacteria 23906
14 Ga0099823_1002265 3300006944 Bacteria 17189
15 Ga0105245_10026694 3300009098 Bacteria 5084
16 Ga0114129_10008280 3300009147 Bacteria 14829
17 Ga0163162_10010345 3300013306 Bacteria 9068
18 Ga0157380_10060697 3300014326 Bacteria 3022
19 Ga0214544_1007602 3300021320 Bacteria 18868
20 Ga0214544_1010377 3300021320 Bacteria 13740
21 Ga0214542_1003483 3300021321 Bacteria 32046
22 Ga0214542_1007823 3300021321 Bacteria 18256
23 Ga0214542_1010640 3300021321 Bacteria 13259
24 Ga0214543_1000066 3300021327 Bacteria 126288
25 Ga0214543_1003186 3300021327 Bacteria 32047
26 Ga0213875_10002723 3300021388 Bacteria 10432
27 Ga0209758_1001538 3300025297 Bacteria 26527
28 Ga0209257_1000573 3300025304 Bacteria 61813
29 Ga0207706_10095464 3300025933 Bacteria 2615
30 Ga0207691_10059216 3300025940 Bacteria 3483
31 Ga0209389_1000184 3300027296 Bacteria 47378
32 Ga0209389_1000689 3300027296 Bacteria 21021
33 Ga0209389_1001339 3300027296 Bacteria 17251
34 Ga0209589_1002313 3300027357 Bacteria 32633
35 Ga0209589_1006289 3300027357 Bacteria 19738
36 Ga0209489_101548 3300027361 Bacteria 47378
37 Ga0209489_103090 3300027361 Bacteria 32633
38 Ga0209489_105744 3300027361 Bacteria 21021
39 Ga0209700_101578 3300027363 Bacteria 47378
40 Ga0209700_103039 3300027363 Bacteria 32633
41 Ga0268264_10111884 3300028381 Bacteria 2393
42 Ga0265314_10000787 3300031711 Bacteria 37654
43 Ga0307410_10022697 3300031852 Bacteria 3885
44 Ga0395899_0000107 3300037312 Bacteria 144087
45 Ga0395900_0000101 3300037418 Bacteria 153550
46 Ga0395898_0000043 3300037466 Bacteria 301783
47 Ga0395905_0000101 3300037471 Bacteria 144115
48 Ga0436364_0343587 3300037853 Bacteria 58472
49 Ga0395901_0000068 3300038443 Bacteria 144095
50 Ga0466966_0073452 3300044684 Bacteria 2139
51 Ga0453684_0001791 3300044712 Bacteria 57070
52 Ga0495580_0018213 3300046472 Bacteria 5231
53 Ga0495628_0005734 3300046516 Bacteria 10877
54 Ga0495630_0035112 3300046517 Bacteria 3746
55 Ga0495643_0001310 3300046522 Bacteria 23626
56 Ga0495666_0011406 3300046526 Bacteria 4432
57 Ga0495665_0003276 3300046531 Bacteria 8770
58 Ga0495588_0006994 3300046674 Bacteria 5115
59 Ga0495624_0003252 3300046690 Bacteria 12109
60 Ga0495600_0056611 3300046809 Unclassified 2562
61 Ga0495581_0027128 3300047315 Unclassified 3322
62 Ga0495674_0022222 3300047319 Bacteria 5850
63 Ga0495672_0000743 3300047320 Bacteria 35713
64 Ga0495680_0059535 3300047322 Bacteria 2948
65 Ga0495675_0045168 3300047444 Unclassified 2805
66 Ga0495602_0113064 3300048088 Bacteria 2201
67 Ga0495614_0031260 3300048089 Unclassified 2291
68 Ga0501034_0018207 3300049571 Bacteria 7206
69 Ga0501036_0002975 3300049572 Bacteria 13466
70 Ga0501037_0015395 3300049573 Bacteria 5627
71 Ga0501038_0016063 3300049574 Bacteria 6797
72 Ga0501039_0103591 3300049575 Bacteria 2221
73 Ga0501042_0029106 3300049578 Bacteria 3896
74 Ga0501043_0005766 3300049579 Bacteria 9978
75 Ga0501047_0095415 3300049581 Bacteria 2853
76 Ga0501072_0106968 3300049588 Bacteria 2225
77 Ga0501074_0001789 3300049590 Bacteria 14699
78 Ga0501083_0007372 3300049744 Bacteria 7806
79 Ga0501083_0016879 3300049744 Bacteria 5100
80 nmdc:mga05p37_2280_c1 3300050507 Bacteria 22364
81 Ga0500635_0008177 3300053080 Bacteria 2859
82 Ga0500641_0011104 3300053096 Bacteria 3264
83 Ga0500639_013689 3300053163 Bacteria 4263
84 Ga0500637_0018300 3300053178 Bacteria 3764
85 Ga0501082_0019929 3300060353 Bacteria 5780
86 2507506545 2507262055 Bacteria 8048963
87 2508540395 2508501009 Bacteria 7784016
88 2509152327 2508501128 Bacteria 8613869
89 2513627989 2513237092 Bacteria 8341956
90 2513627995 2513237092 Bacteria 8341956
91 2513699084 2513237101 Bacteria 7952346
92 2545676606 2545555834 Bacteria 8130841
93 2617354524 2617270735 Bacteria 9163226
94 2644728430 2643221733 Bacteria 5690728
95 2723844372 2721755755 Bacteria 8322773
96 2819538866 2818991435 Bacteria 5433759
97 2824601266 2824600985 Bacteria 8488197
98 2824733206 2824732956 Bacteria 7810675
99 2824781116 2824773399 Bacteria 8360218
100 2841965196 2841957949 Bacteria 8652217
101 2841972524 2841966195 Bacteria 8673214
102 2841976888 2841974524 Bacteria 8931498
103 2842045522 2842038055 Bacteria 8002051
104 2842053121 2842045827 Bacteria 8006841
105 2854684743 2854681122 Bacteria 4548679
106 2874619165 2874612657 Bacteria 8252029
107 2874620858 2874620515 Bacteria 8290088
108 2876761383 2876761206 Bacteria 10111113
109 2879088625 2879083081 Bacteria 8587928
110 2879128474 2879127579 Bacteria 8294491
111 2879143852 2879142872 Bacteria 8267021
112 2881670500 2881665667 Bacteria 8175609
113 2885381155 2885374607 Bacteria 8927485
114 2898798207 2898795034 Bacteria 4294459
115 2906652177 2906643746 Bacteria 8722424
116 2922363868 2922361189 Bacteria 7436256
117 2935616426 2935608549 Bacteria 8203142
118 2935646264 2935638405 Bacteria 10015038
119 2935656859 2935648319 Bacteria 8801166
120 2935665687 2935656913 Bacteria 8965014
121 2935713014 2935703347 Bacteria 10242284
122 2935784997 2935777560 Bacteria 8077691
123 2935827550 2935819856 Bacteria 8261050
124 2935836993 2935827899 Bacteria 10038562
125 2935847080 2935837841 Bacteria 9454360
126 2935854875 2935847175 Bacteria 8228321
127 2935882995 2935873716 Bacteria 9632195
128 2935889005 2935883170 Bacteria 7964738
129 2935916399 2935908558 Bacteria 8568796
130 2935925727 2935916978 Bacteria 9113783
131 2935933806 2935926038 Bacteria 8601059
132 2935942422 2935934488 Bacteria 8602579
133 2935950831 2935942939 Bacteria 8599779
134 2935959323 2935951376 Bacteria 8602333
135 2935967213 2935959822 Bacteria 7869783
136 2935975804 2935967501 Bacteria 8603075
137 2935984052 2935975950 Bacteria 8347125
138 2936019761 2936011229 Bacteria 8801034
139 2936028365 2936019824 Bacteria 8804134
140 2936037212 2936028420 Bacteria 8965941
141 2936055237 2936046547 Bacteria 8903709
142 2936063213 2936055302 Bacteria 8785755
143 2936063543 2936055302 Bacteria 8785755
144 3005486142 3005483717 Bacteria 7877331
145 3005593123 3005587118 Bacteria 7794411
146 641644020 641522639 Bacteria 7737025
147 8006985800 8006984368 Bacteria 9651211
148 8006992935 8006984368 Bacteria 9651211
149 8016527485 8016522445 Bacteria 8156687
150 8016532579 8016530956 Bacteria 8155261
151 8016545807 8016539877 Bacteria 8155419
152 8016564666 8016557553 Bacteria 8154380
153 8016570884 8016566248 Bacteria 8158151
154 8016583389 8016575299 Bacteria 8154085
155 8016602324 8016595262 Bacteria 8149947
156 8016605306 8016603502 Bacteria 8731218
157 8016617141 8016613128 Bacteria 8794220
158 8019532394 8019530166 Bacteria 8155624
159 8019564589 8019555841 Bacteria 9642137
160 8019574673 8019565922 Bacteria 9639779
161 8019585438 8019576017 Bacteria 10049540
162 8019593688 8019586578 Bacteria 10212056
163 8019598052 8019597564 Bacteria 10041141
164 8019610329 8019608314 Bacteria 10042931
165 8019669366 8019668869 Bacteria 8791617
166 8056687917 8056681323 Bacteria 8472857
167 Ga0099824_1013404
168 Ga0070683_100045152
169 Ga0070662_100068154
170 Ga0070672_100028313
171 Ga0068863_100087130
172 Ga0068858_100065228
173 Ga0068860_100087676
174 Ga0081455_10000065
175 Ga0081539_10000045
176 Ga0099824_1020514
177 Ga0099822_1027592
178 Ga0099822_1042970
179 Ga0099823_1000731
180 Ga0099823_1002265
181 Ga0105245_10026694
182 Ga0114129_10008280
183 Ga0163162_10010345
184 Ga0157380_10060697
185 Ga0214544_1007602
186 Ga0214544_1010377
187 Ga0214542_1003483
188 Ga0214542_1007823
189 Ga0214542_1010640
190 Ga0214543_1000066
191 Ga0214543_1003186
192 Ga0213875_10002723
193 Ga0209758_1001538
194 Ga0209257_1000573
195 Ga0207706_10095464
196 Ga0207691_10059216
197 Ga0209389_1000184
198 Ga0209389_1000689
199 Ga0209389_1001339
200 Ga0209589_1002313
201 Ga0209589_1006289
202 Ga0209489_101548
203 Ga0209489_103090
204 Ga0209489_105744
205 Ga0209700_101578
206 Ga0209700_103039
207 Ga0268264_10111884
208 Ga0265314_10000787
209 Ga0307410_10022697
210 Ga0395899_0000107
211 Ga0395900_0000101
212 Ga0395898_0000043
213 Ga0395905_0000101
214 Ga0436364_0343587
215 Ga0395901_0000068
216 Ga0466966_0073452
217 Ga0453684_0001791
218 Ga0495580_0018213
219 Ga0495628_0005734
220 Ga0495630_0035112
221 Ga0495643_0001310
222 Ga0495666_0011406
223 Ga0495665_0003276
224 Ga0495588_0006994
225 Ga0495624_0003252
226 Ga0495600_0056611
227 Ga0495581_0027128
228 Ga0495674_0022222
229 Ga0495672_0000743
230 Ga0495680_0059535
231 Ga0495675_0045168
232 Ga0495602_0113064
233 Ga0495614_0031260
234 Ga0501034_0018207
235 Ga0501036_0002975
236 Ga0501037_0015395
237 Ga0501038_0016063
238 Ga0501039_0103591
239 Ga0501042_0029106
240 Ga0501043_0005766
241 Ga0501047_0095415
242 Ga0501072_0106968
243 Ga0501074_0001789
244 Ga0501083_0007372
245 Ga0501083_0016879
246 nmdc:mga05p37_2280_c1
247 Ga0500635_0008177
248 Ga0500641_0011104
249 Ga0500639_013689
250 Ga0500637_0018300
251 Ga0501082_0019929
252 2507506545
253 2508540395
254 2509152327
255 2513627989
256 2513627995
257 2513699084
258 2545676606
259 2617354524
260 2644728430
261 2723844372
262 2819538866
263 2824601266
264 2824733206
265 2824781116
266 2841965196
267 2841972524
268 2841976888
269 2842045522
270 2842053121
271 2854684743
272 2874619165
273 2874620858
274 2876761383
275 2879088625
276 2879128474
277 2879143852
278 2881670500
279 2885381155
280 2898798207
281 2906652177
282 2922363868
283 2935616426
284 2935646264
285 2935656859
286 2935665687
287 2935713014
288 2935784997
289 2935827550
290 2935836993
291 2935847080
292 2935854875
293 2935882995
294 2935889005
295 2935916399
296 2935925727
297 2935933806
298 2935942422
299 2935950831
300 2935959323
301 2935967213
302 2935975804
303 2935984052
304 2936019761
305 2936028365
306 2936037212
307 2936055237
308 2936063213
309 2936063543
310 3005486142
311 3005593123
312 641644020
313 8006985800
314 8006992935
315 8016527485
316 8016532579
317 8016545807
318 8016564666
319 8016570884
320 8016583389
321 8016602324
322 8016605306
323 8016617141
324 8019532394
325 8019564589
326 8019574673
327 8019585438
328 8019593688
329 8019598052
330 8019610329
331 8019669366
332 8056687917

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

497

576

0.91

PF00501

AMP-binding

AMP-binding enzyme

91

447

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.9206 29 424
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.9071 29 424
5zrn-assembly1.cif.gz_A inhibitor bound crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis 0.8907 29 424
3t5c-assembly2.cif.gz_B crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis in different space group c2 0.8886 29 421
5bur-assembly1.cif.gz_B o-succinylbenzoate coenzyme a synthetase (mene) from bacillus subtilis, in complex with atp and magnesium ion 0.8844 25 422
ID Description Score Start End Superfamily
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9766 428 522 3.30.300.30
af_A0A0R0JS26_74_160_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9694 58 140 3.40.50.980
af_Q2G294_455_568_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9464 427 527 3.30.300.30
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9464 427 528 3.30.300.30
af_Q9VCC6_436_544_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.946 427 527 3.30.300.30
ID Description Score Start End GO Terms
AF-T0P079-F1-model_v4 deleted 0.9487 30 136
AF-A0A2S8MBL5-F1-model_v4 deleted 0.9399 34 161
AF-A0A2N2L4N4-F1-model_v4 Acyl-CoA dehydrogenase 0.9397 27 131 GO:0003995
GO:0050660
AF-A0A7C7YDG3-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9339 29 162
AF-A0A3D4M3K1-F1-model_v4 deleted 0.9325 30 160

Map